No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1126700.v1.1 |
| prunus_persica | Prupe.6G111400_v2.0.a1 Prupe.6G197700_v2.0.a1 Prupe.6G197800_v2.0.a1 Prupe.6G197900_v2.0.a1 Prupe.6G198000_v2.0.a1 Prupe.6G198100_v2.0.a1 |
| pyrus_communis | pycom15g27790 |
| rosa_chinensis | RchiOBHm_Chr2g0111391 RchiOBHm_Chr2g0111401 |
| rosa_roxburghii | Rroxscaffold_2G00132410 Rroxscaffold_2G00132420 |
| rosa_samantha | Rh2AG226600 Rh2BG238300 Rh2BG238400 Rh2CG229700 Rh2DG234000 |
| rosa_wichuraiana | Rw2G017480 Rw2G017490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 234 |
| AciI | CCGC | 4 cut(s) | 232, 642, 769, 885 |
| AcoI | YGGCCR | 1 cut(s) | 721 |
| AcuI | CTGAAG | 1 cut(s) | 57 |
| AgsI | TTSAA | 1 cut(s) | 94 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 102, 134 |
| AluBI | AGCT | 5 cut(s) | 35, 81, 177, 204, 544 |
| AluI | AGCT | 5 cut(s) | 35, 81, 177, 204, 544 |
| Alw21I | GWGCWC | 1 cut(s) | 159 |
| Alw26I | GTCTC | 1 cut(s) | 46 |
| Ama87I | CYCGRG | 1 cut(s) | 152 |
| AoxI | GGCC | 8 cut(s) | 295, 337, 403, 565, 631, 721, 808, 874 |
| ApeKI | GCWGC | 4 cut(s) | 78, 174, 198, 201 |
| AseI | ATTAAT | 1 cut(s) | 87 |
| AvaI | CYCGRG | 1 cut(s) | 152 |
| BaeGI | GKGCMC | 2 cut(s) | 232, 979 |
| BanII | GRGCYC | 1 cut(s) | 26 |
| Bbv12I | GWGCWC | 1 cut(s) | 159 |
| BbvI | GCAGC | 4 cut(s) | 90, 186, 210, 213 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 127, 161, 760, 794 |
| BcoDI | GTCTC | 1 cut(s) | 46 |
| BisI | GCNGC | 6 cut(s) | 79, 175, 199, 202, 642, 885 |
| BlsI | GCNGC | 6 cut(s) | 80, 176, 200, 203, 643, 886 |
| BmeT110I | CYCGRG | 1 cut(s) | 152 |
| BpmI | CTGGAG | 1 cut(s) | 28 |
| BsaJI | CCNNGG | 6 cut(s) | 73, 274, 292, 334, 562, 805 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 512, 542, 695, 725, 938, 968 |
| Bse118I | RCCGGY | 1 cut(s) | 719 |
| Bse1I | ACTGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 6 cut(s) | 73, 274, 292, 334, 562, 805 |
| BseGI | GGATG | 1 cut(s) | 765 |
| BseMII | CTCAG | 1 cut(s) | 985 |
| BseNI | ACTGG | 1 cut(s) | 222 |
| BseRI | GAGGAG | 1 cut(s) | 196 |
| BseSI | GKGCMC | 2 cut(s) | 232, 979 |
| BseXI | GCAGC | 4 cut(s) | 90, 186, 210, 213 |
| Bsh1236I | CGCG | 1 cut(s) | 234 |
| BshFI | GGCC | 8 cut(s) | 297, 339, 405, 567, 633, 723, 810, 876 |
| BsiHKAI | GWGCWC | 1 cut(s) | 159 |
| BsiHKCI | CYCGRG | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 720 |
| BsmAI | GTCTC | 1 cut(s) | 46 |
| BsnI | GGCC | 8 cut(s) | 297, 339, 405, 567, 633, 723, 810, 876 |
| BsoBI | CYCGRG | 1 cut(s) | 152 |
| Bsp1286I | GDGCHC | 4 cut(s) | 26, 159, 232, 979 |
| BspACI | CCGC | 4 cut(s) | 232, 642, 769, 885 |
| BspANI | GGCC | 8 cut(s) | 297, 339, 405, 567, 633, 723, 810, 876 |
| BspCNI | CTCAG | 1 cut(s) | 984 |
| BspFNI | CGCG | 1 cut(s) | 234 |
| BsrFI | RCCGGY | 1 cut(s) | 719 |
| BsrI | ACTGG | 1 cut(s) | 222 |
| BssAI | RCCGGY | 1 cut(s) | 719 |
| BssECI | CCNNGG | 6 cut(s) | 73, 274, 292, 334, 562, 805 |
| BssT1I | CCWWGG | 5 cut(s) | 73, 292, 334, 562, 805 |
| Bst6I | CTCTTC | 1 cut(s) | 109 |
| BstC8I | GCNNGC | 6 cut(s) | 179, 232, 538, 542, 721, 964 |
| BstDEI | CTNAG | 1 cut(s) | 971 |
| BstF5I | GGATG | 1 cut(s) | 765 |
| BstFNI | CGCG | 1 cut(s) | 234 |
| BstMAI | GTCTC | 1 cut(s) | 46 |
| BstSLI | GKGCMC | 2 cut(s) | 232, 979 |
| BstUI | CGCG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 4 cut(s) | 90, 186, 210, 213 |
| BsuRI | GGCC | 8 cut(s) | 297, 339, 405, 567, 633, 723, 810, 876 |
| BtgZI | GCGATG | 1 cut(s) | 427 |
| BtsCI | GGATG | 1 cut(s) | 765 |
| BtsI | GCAGTG | 6 cut(s) | 216, 285, 327, 729, 798, 928 |
| BtsIMutI | CAGTG | 8 cut(s) | 216, 279, 285, 327, 729, 798, 928, 979 |
| Cac8I | GCNNGC | 6 cut(s) | 179, 232, 538, 542, 721, 964 |
| Cfr10I | RCCGGY | 1 cut(s) | 719 |
| DdeI | CTNAG | 1 cut(s) | 971 |
| EaeI | YGGCCR | 1 cut(s) | 721 |
| Eam1104I | CTCTTC | 1 cut(s) | 109 |
| EarI | CTCTTC | 1 cut(s) | 109 |
| Eco130I | CCWWGG | 5 cut(s) | 73, 292, 334, 562, 805 |
| Eco24I | GRGCYC | 1 cut(s) | 26 |
| Eco57I | CTGAAG | 1 cut(s) | 57 |
| Eco88I | CYCGRG | 1 cut(s) | 152 |
| EcoT14I | CCWWGG | 5 cut(s) | 73, 292, 334, 562, 805 |
| EcoT38I | GRGCYC | 1 cut(s) | 26 |
| ErhI | CCWWGG | 5 cut(s) | 73, 292, 334, 562, 805 |
| FaiI | YATR | 3 cut(s) | 28, 30, 498 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 102, 134, 393, 425 |
| FauI | CCCGC | 1 cut(s) | 239 |
| FauNDI | CATATG | 1 cut(s) | 28 |
| Fnu4HI | GCNGC | 6 cut(s) | 79, 175, 199, 202, 642, 885 |
| FokI | GGATG | 1 cut(s) | 752 |
| FriOI | GRGCYC | 1 cut(s) | 26 |
| Fsp4HI | GCNGC | 6 cut(s) | 79, 175, 199, 202, 642, 885 |
| GluI | GCNGC | 6 cut(s) | 79, 175, 199, 202, 642, 885 |
| GsuI | CTGGAG | 1 cut(s) | 28 |
| HaeIII | GGCC | 8 cut(s) | 297, 339, 405, 567, 633, 723, 810, 876 |
| HapII | CCGG | 1 cut(s) | 720 |
| HinfI | GANTC | 4 cut(s) | 101, 236, 782, 863 |
| HpaII | CCGG | 1 cut(s) | 720 |
| Hpy188I | TCNGA | 2 cut(s) | 610, 670 |
| Hpy188III | TCNNGA | 2 cut(s) | 45, 152 |
| HpyAV | CCTTC | 3 cut(s) | 610, 787, 853 |
| HpyCH4V | TGCA | 1 cut(s) | 258 |
| HpyF3I | CTNAG | 1 cut(s) | 971 |
| KroI | GCCGGC | 1 cut(s) | 719 |
| KroNI | GCCGGC | 1 cut(s) | 721 |
| LmnI | GCTCC | 2 cut(s) | 86, 209 |
| Lsp1109I | GCAGC | 4 cut(s) | 90, 186, 210, 213 |
| MboII | GAAGA | 2 cut(s) | 96, 110 |
| MhlI | GDGCHC | 4 cut(s) | 26, 159, 232, 979 |
| MluCI | AATT | 3 cut(s) | 88, 772, 1015 |
| MlyI | GAGTC | 3 cut(s) | 95, 776, 857 |
| MmeI | TCCRAC | 3 cut(s) | 405, 633, 876 |
| MroNI | GCCGGC | 1 cut(s) | 719 |
| MseI | TTAA | 1 cut(s) | 87 |
| MslI | CAYNNNNRTG | 1 cut(s) | 162 |
| MspI | CCGG | 1 cut(s) | 720 |
| MvnI | CGCG | 1 cut(s) | 234 |
| NaeI | GCCGGC | 1 cut(s) | 721 |
| NdeI | CATATG | 1 cut(s) | 28 |
| NgoMIV | GCCGGC | 1 cut(s) | 719 |
| NmeAIII | GCCGAG | 1 cut(s) | 255 |
| PaeR7I | CTCGAG | 1 cut(s) | 152 |
| PdiI | GCCGGC | 1 cut(s) | 721 |
| PfeI | GAWTC | 1 cut(s) | 236 |
| PkrI | GCNGC | 6 cut(s) | 80, 176, 200, 203, 643, 886 |
| PleI | GAGTC | 3 cut(s) | 95, 776, 857 |
| PpsI | GAGTC | 3 cut(s) | 95, 776, 857 |
| PshBI | ATTAAT | 1 cut(s) | 87 |
| RseI | CAYNNNNRTG | 1 cut(s) | 162 |
| SaqAI | TTAA | 1 cut(s) | 87 |
| SatI | GCNGC | 6 cut(s) | 79, 175, 199, 202, 642, 885 |
| SchI | GAGTC | 3 cut(s) | 95, 776, 857 |
| SduI | GDGCHC | 4 cut(s) | 26, 159, 232, 979 |
| Sfr274I | CTCGAG | 1 cut(s) | 152 |
| SlaI | CTCGAG | 1 cut(s) | 152 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 162 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| Sse9I | AATT | 3 cut(s) | 88, 772, 1015 |
| SsiI | CCGC | 4 cut(s) | 232, 642, 769, 885 |
| StyI | CCWWGG | 5 cut(s) | 73, 292, 334, 562, 805 |
| TaqI | TCGA | 3 cut(s) | 153, 318, 780 |
| TasI | AATT | 3 cut(s) | 88, 772, 1015 |
| TauI | GCSGC | 2 cut(s) | 644, 887 |
| TfiI | GAWTC | 1 cut(s) | 236 |
| Tru1I | TTAA | 1 cut(s) | 87 |
| Tru9I | TTAA | 1 cut(s) | 87 |
| TscAI | CASTG | 8 cut(s) | 223, 286, 292, 334, 736, 805, 928, 979 |
| TseI | GCWGC | 4 cut(s) | 78, 174, 198, 201 |
| TspDTI | ATGAA | 3 cut(s) | 45, 180, 835 |
| TspGWI | ACGGA | 1 cut(s) | 1018 |
| TspRI | CASTG | 8 cut(s) | 223, 286, 292, 334, 736, 805, 928, 979 |
| VspI | ATTAAT | 1 cut(s) | 87 |
| XhoI | CTCGAG | 1 cut(s) | 152 |