Rh2BG034800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
2407366 .. 2407689
324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG034800.1

Sequence Viewer

Length: 324 bp
ATGCAGCAAAAAATACTCTTATCAAGTGCAGGGAAGAAAACGGTGGAGTACACAGTGCCATTAGCAGAGAAGACTAAAGATATGGCCATGTTTGCAGGTAAGACCACTCTGCATTATGTTGGTCATGTTGCGGTGGATTTGAAGGACAAGGCCACTGTGGTAGGTTGGACTGCAGCGCACTACGCAACTGAGGCAGCAGTGGAGGGAACCAAAGCAGCTGCAAGGTTGGAGCTCAAAGGCACAGCAAGGAGGGCAGGAATGGAGCTCAAATGCACAGCAAGGGAGGCAGGGGGGATACTAGAACATGATCTACTTAGTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

107

Amino Acids

11.43

Weight (kDa)

9.07

Isoelectric Point (pI)

26.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 86
AciI CCGC 1 cut(s) 131
AcoI YGGCCR 1 cut(s) 84
AfaI GTAC 1 cut(s) 50
AgsI TTSAA 1 cut(s) 142
AluBI AGCT 3 cut(s) 218, 232, 265
AluI AGCT 3 cut(s) 218, 232, 265
Alw21I GWGCWC 2 cut(s) 234, 267
AoxI GGCC 2 cut(s) 84, 150
ApeKI GCWGC 5 cut(s) 4, 173, 194, 215, 218
AspLEI GCGC 1 cut(s) 178
BalI TGGCCA 1 cut(s) 86
BanII GRGCYC 2 cut(s) 234, 267
BbsI GAAGAC 1 cut(s) 77
Bbv12I GWGCWC 2 cut(s) 234, 267
BbvI GCAGC 5 cut(s) 16, 185, 205, 206, 227
BciVI GTATCC 1 cut(s) 288
BfaI CTAG 1 cut(s) 299
BfmI CTRYAG 1 cut(s) 171
BfuAI ACCTGC 1 cut(s) 86
BfuI GTATCC 1 cut(s) 288
BisI GCNGC 5 cut(s) 5, 174, 195, 216, 219
BlsI GCNGC 5 cut(s) 6, 175, 196, 217, 220
BmiI GGNNCC 1 cut(s) 208
BpiI GAAGAC 1 cut(s) 77
BseMII CTCAG 1 cut(s) 180
BseXI GCAGC 5 cut(s) 16, 185, 205, 206, 227
BsgI GTGCAG 1 cut(s) 48
BshFI GGCC 2 cut(s) 86, 152
BsiHKAI GWGCWC 2 cut(s) 234, 267
BsnI GGCC 2 cut(s) 86, 152
Bsp1286I GDGCHC 2 cut(s) 234, 267
Bsp143I GATC 1 cut(s) 307
BspACI CCGC 1 cut(s) 131
BspANI GGCC 2 cut(s) 86, 152
BspCNI CTCAG 1 cut(s) 181
BspLI GGNNCC 1 cut(s) 208
BspMAI CTGCAG 1 cut(s) 175
BspMI ACCTGC 1 cut(s) 86
BssMI GATC 1 cut(s) 307
Bst4CI ACNGT 3 cut(s) 43, 55, 157
BstDEI CTNAG 2 cut(s) 189, 314
BstHHI GCGC 1 cut(s) 178
BstKTI GATC 1 cut(s) 310
BstMBI GATC 1 cut(s) 307
BstMWI GCNNNNNNNGC 5 cut(s) 92, 182, 191, 251, 284
BstSFI CTRYAG 1 cut(s) 171
BstV1I GCAGC 5 cut(s) 16, 185, 205, 206, 227
BstV2I GAAGAC 1 cut(s) 77
BsuI GTATCC 1 cut(s) 288
BsuRI GGCC 2 cut(s) 86, 152
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 3 cut(s) 60, 153, 204
BveI ACCTGC 1 cut(s) 86
CfoI GCGC 1 cut(s) 178
Csp6I GTAC 1 cut(s) 49
CviAII CATG 3 cut(s) 88, 125, 305
CviJI RGCY 5 cut(s) 86, 152, 218, 232, 265
CviKI_1 RGCY 5 cut(s) 86, 152, 218, 232, 265
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 2 cut(s) 189, 314
DpnI GATC 1 cut(s) 309
DpnII GATC 1 cut(s) 307
EaeI YGGCCR 1 cut(s) 84
Ecl136II GAGCTC 2 cut(s) 232, 265
Eco24I GRGCYC 2 cut(s) 234, 267
Eco53kI GAGCTC 2 cut(s) 232, 265
EcoICRI GAGCTC 2 cut(s) 232, 265
EcoT38I GRGCYC 2 cut(s) 234, 267
FaeI CATG 3 cut(s) 91, 128, 308
FaiI YATR 5 cut(s) 83, 89, 117, 126, 306
FatI CATG 3 cut(s) 87, 124, 304
Fnu4HI GCNGC 5 cut(s) 5, 174, 195, 216, 219
FriOI GRGCYC 2 cut(s) 234, 267
Fsp4HI GCNGC 5 cut(s) 5, 174, 195, 216, 219
FspBI CTAG 1 cut(s) 299
GlaI GCGC 1 cut(s) 177
GluI GCNGC 5 cut(s) 5, 174, 195, 216, 219
HaeIII GGCC 2 cut(s) 86, 152
HhaI GCGC 1 cut(s) 178
Hin1II CATG 3 cut(s) 91, 128, 308
Hin6I GCGC 1 cut(s) 176
HinP1I GCGC 1 cut(s) 176
Hpy166II GTNNAC 1 cut(s) 51
Hpy8I GTNNAC 1 cut(s) 51
HpyAV CCTTC 1 cut(s) 136
HpyCH4III ACNGT 3 cut(s) 43, 55, 157
HpyCH4V TGCA 7 cut(s) 4, 29, 95, 112, 173, 221, 273
HpyF10VI GCNNNNNNNGC 5 cut(s) 92, 182, 191, 251, 284
HpyF3I CTNAG 2 cut(s) 189, 314
Hsp92II CATG 3 cut(s) 91, 128, 308
HspAI GCGC 1 cut(s) 176
Kzo9I GATC 1 cut(s) 307
LmnI GCTCC 2 cut(s) 229, 262
LpnPI CCDG 4 cut(s) 15, 81, 240, 273
Lsp1109I GCAGC 5 cut(s) 16, 185, 205, 206, 227
MaeI CTAG 1 cut(s) 299
MalI GATC 1 cut(s) 309
MboI GATC 1 cut(s) 307
MboII GAAGA 2 cut(s) 46, 82
MhlI GDGCHC 2 cut(s) 234, 267
MlsI TGGCCA 1 cut(s) 86
MluNI TGGCCA 1 cut(s) 86
MmeI TCCRAC 2 cut(s) 146, 207
MnlI CCTC 4 cut(s) 184, 196, 243, 277
Mox20I TGGCCA 1 cut(s) 86
MscI TGGCCA 1 cut(s) 86
Msp20I TGGCCA 1 cut(s) 86
MspA1I CMGCKG 1 cut(s) 218
MwoI GCNNNNNNNGC 5 cut(s) 92, 182, 191, 251, 284
NdeII GATC 1 cut(s) 307
NlaIII CATG 3 cut(s) 91, 128, 308
NlaIV GGNNCC 1 cut(s) 208
PkrI GCNGC 5 cut(s) 6, 175, 196, 217, 220
Psp124BI GAGCTC 2 cut(s) 234, 267
PspN4I GGNNCC 1 cut(s) 208
PsrI GAACNNNNNNTAC 1 cut(s) 294
PstI CTGCAG 1 cut(s) 175
PvuII CAGCTG 1 cut(s) 218
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
SacI GAGCTC 2 cut(s) 234, 267
SatI GCNGC 5 cut(s) 5, 174, 195, 216, 219
Sau3AI GATC 1 cut(s) 307
SduI GDGCHC 2 cut(s) 234, 267
SetI ASST 6 cut(s) 100, 166, 220, 227, 234, 267
SfcI CTRYAG 1 cut(s) 171
SsiI CCGC 1 cut(s) 131
SspMI CTAG 1 cut(s) 299
SstI GAGCTC 2 cut(s) 234, 267
TaaI ACNGT 3 cut(s) 43, 55, 157
TatI WGTACW 1 cut(s) 48
TscAI CASTG 3 cut(s) 60, 160, 204
TseI GCWGC 5 cut(s) 4, 173, 194, 215, 218
TspRI CASTG 3 cut(s) 60, 160, 204
XspI CTAG 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.