transport protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0341671 |
| rosa_laevigata | RLG00000004341 RLG00000016679 |
| rosa_multiflora | Rmu_sc0002236.1_g000016 Rmu_sc0002351.1_g000032 Rmu_sc0007941.1_g000001 Rmu_sc0009323.1_g000001 Rmu_sc0011721.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00029120 Rroxscaffold_2G00104280 Rroxscaffold_5G00348810 |
| rosa_samantha | Rh1BG261400 Rh2BG231700 Rh2BG251000 Rh4AG053800 Rh4BG187600 Rh7AG317400 Rh7CG334200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 53 |
| AciI | CCGC | 1 cut(s) | 5 |
| AclWI | GGATC | 1 cut(s) | 112 |
| AcsI | RAATTY | 2 cut(s) | 195, 242 |
| AfaI | GTAC | 1 cut(s) | 147 |
| AgsI | TTSAA | 3 cut(s) | 73, 91, 175 |
| AluBI | AGCT | 3 cut(s) | 60, 94, 111 |
| AluI | AGCT | 3 cut(s) | 60, 94, 111 |
| Alw21I | GWGCWC | 1 cut(s) | 62 |
| Alw26I | GTCTC | 1 cut(s) | 152 |
| AlwI | GGATC | 1 cut(s) | 112 |
| AoxI | GGCC | 1 cut(s) | 124 |
| ApeKI | GCWGC | 1 cut(s) | 98 |
| ApoI | RAATTY | 2 cut(s) | 195, 242 |
| BanII | GRGCYC | 2 cut(s) | 62, 135 |
| Bbv12I | GWGCWC | 1 cut(s) | 62 |
| BbvI | GCAGC | 1 cut(s) | 85 |
| BccI | CCATC | 1 cut(s) | 10 |
| BcoDI | GTCTC | 1 cut(s) | 152 |
| BisI | GCNGC | 1 cut(s) | 99 |
| BlsI | GCNGC | 1 cut(s) | 100 |
| BpuEI | CTTGAG | 1 cut(s) | 99 |
| BsaBI | GATNNNNATC | 1 cut(s) | 30 |
| BsaJI | CCNNGG | 1 cut(s) | 127 |
| Bse3DI | GCAATG | 1 cut(s) | 135 |
| Bse8I | GATNNNNATC | 1 cut(s) | 30 |
| BseDI | CCNNGG | 1 cut(s) | 127 |
| BseGI | GGATG | 1 cut(s) | 18 |
| BseJI | GATNNNNATC | 1 cut(s) | 30 |
| BseMI | GCAATG | 1 cut(s) | 135 |
| BseMII | CTCAG | 1 cut(s) | 54 |
| BseXI | GCAGC | 1 cut(s) | 85 |
| Bsh1285I | CGRYCG | 2 cut(s) | 9, 28 |
| BshFI | GGCC | 1 cut(s) | 126 |
| BsiEI | CGRYCG | 2 cut(s) | 9, 28 |
| BsiHKAI | GWGCWC | 1 cut(s) | 62 |
| BsmAI | GTCTC | 1 cut(s) | 152 |
| BsnI | GGCC | 1 cut(s) | 126 |
| Bsp1286I | GDGCHC | 2 cut(s) | 62, 135 |
| Bsp143I | GATC | 3 cut(s) | 25, 31, 104 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 126 |
| BspCNI | CTCAG | 1 cut(s) | 55 |
| BspPI | GGATC | 1 cut(s) | 112 |
| BsrDI | GCAATG | 1 cut(s) | 135 |
| BssECI | CCNNGG | 1 cut(s) | 127 |
| BssMI | GATC | 3 cut(s) | 25, 31, 104 |
| BssT1I | CCWWGG | 1 cut(s) | 127 |
| BstC8I | GCNNGC | 1 cut(s) | 96 |
| BstDEI | CTNAG | 1 cut(s) | 63 |
| BstF5I | GGATG | 1 cut(s) | 18 |
| BstKTI | GATC | 3 cut(s) | 28, 34, 107 |
| BstMAI | GTCTC | 1 cut(s) | 152 |
| BstMBI | GATC | 3 cut(s) | 25, 31, 104 |
| BstMCI | CGRYCG | 2 cut(s) | 9, 28 |
| BstV1I | GCAGC | 1 cut(s) | 85 |
| BsuRI | GGCC | 1 cut(s) | 126 |
| BtsCI | GGATG | 1 cut(s) | 18 |
| Cac8I | GCNNGC | 1 cut(s) | 96 |
| Csp6I | GTAC | 1 cut(s) | 146 |
| CviAII | CATG | 3 cut(s) | 38, 84, 237 |
| CviJI | RGCY | 5 cut(s) | 60, 94, 111, 126, 133 |
| CviKI_1 | RGCY | 5 cut(s) | 60, 94, 111, 126, 133 |
| CviQI | GTAC | 1 cut(s) | 146 |
| DdeI | CTNAG | 1 cut(s) | 63 |
| DpnI | GATC | 3 cut(s) | 27, 33, 106 |
| DpnII | GATC | 3 cut(s) | 25, 31, 104 |
| Ecl136II | GAGCTC | 1 cut(s) | 60 |
| Eco130I | CCWWGG | 1 cut(s) | 127 |
| Eco24I | GRGCYC | 2 cut(s) | 62, 135 |
| Eco32I | GATATC | 1 cut(s) | 169 |
| Eco53kI | GAGCTC | 1 cut(s) | 60 |
| EcoICRI | GAGCTC | 1 cut(s) | 60 |
| EcoRI | GAATTC | 1 cut(s) | 195 |
| EcoRV | GATATC | 1 cut(s) | 169 |
| EcoT14I | CCWWGG | 1 cut(s) | 127 |
| EcoT38I | GRGCYC | 2 cut(s) | 62, 135 |
| ErhI | CCWWGG | 1 cut(s) | 127 |
| FaeI | CATG | 3 cut(s) | 41, 87, 240 |
| FaiI | YATR | 3 cut(s) | 39, 85, 238 |
| FatI | CATG | 3 cut(s) | 37, 83, 236 |
| FblI | GTMKAC | 1 cut(s) | 53 |
| Fnu4HI | GCNGC | 1 cut(s) | 99 |
| FokI | GGATG | 1 cut(s) | 25 |
| FriOI | GRGCYC | 2 cut(s) | 62, 135 |
| Fsp4HI | GCNGC | 1 cut(s) | 99 |
| GluI | GCNGC | 1 cut(s) | 99 |
| HaeIII | GGCC | 1 cut(s) | 126 |
| Hin1II | CATG | 3 cut(s) | 41, 87, 240 |
| HincII | GTYRAC | 1 cut(s) | 54 |
| HindII | GTYRAC | 1 cut(s) | 54 |
| HinfI | GANTC | 3 cut(s) | 50, 69, 175 |
| Hpy166II | GTNNAC | 1 cut(s) | 54 |
| Hpy188I | TCNGA | 2 cut(s) | 64, 194 |
| Hpy188III | TCNNGA | 4 cut(s) | 10, 29, 116, 172 |
| Hpy8I | GTNNAC | 1 cut(s) | 54 |
| Hpy99I | CGWCG | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 1 cut(s) | 210 |
| HpyF3I | CTNAG | 1 cut(s) | 63 |
| Hsp92II | CATG | 3 cut(s) | 41, 87, 240 |
| Kzo9I | GATC | 3 cut(s) | 25, 31, 104 |
| LpnPI | CCDG | 2 cut(s) | 61, 87 |
| Lsp1109I | GCAGC | 1 cut(s) | 85 |
| MalI | GATC | 3 cut(s) | 27, 33, 106 |
| MboI | GATC | 3 cut(s) | 25, 31, 104 |
| MboII | GAAGA | 2 cut(s) | 26, 191 |
| MhlI | GDGCHC | 2 cut(s) | 62, 135 |
| MluCI | AATT | 2 cut(s) | 195, 242 |
| MlyI | GAGTC | 1 cut(s) | 59 |
| NdeII | GATC | 3 cut(s) | 25, 31, 104 |
| NlaIII | CATG | 3 cut(s) | 41, 87, 240 |
| PfeI | GAWTC | 2 cut(s) | 69, 175 |
| PkrI | GCNGC | 1 cut(s) | 100 |
| Ple19I | CGATCG | 1 cut(s) | 28 |
| PleI | GAGTC | 1 cut(s) | 58 |
| PpsI | GAGTC | 1 cut(s) | 58 |
| Psp124BI | GAGCTC | 1 cut(s) | 62 |
| PvuI | CGATCG | 1 cut(s) | 28 |
| RsaI | GTAC | 1 cut(s) | 147 |
| RsaNI | GTAC | 1 cut(s) | 146 |
| SacI | GAGCTC | 1 cut(s) | 62 |
| SalI | GTCGAC | 1 cut(s) | 52 |
| SatI | GCNGC | 1 cut(s) | 99 |
| Sau3AI | GATC | 3 cut(s) | 25, 31, 104 |
| SchI | GAGTC | 1 cut(s) | 59 |
| SduI | GDGCHC | 2 cut(s) | 62, 135 |
| SetI | ASST | 4 cut(s) | 62, 80, 96, 113 |
| SmlI | CTYRAG | 1 cut(s) | 114 |
| SmoI | CTYRAG | 1 cut(s) | 114 |
| Sse9I | AATT | 2 cut(s) | 195, 242 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SstI | GAGCTC | 1 cut(s) | 62 |
| StyI | CCWWGG | 1 cut(s) | 127 |
| TaqI | TCGA | 2 cut(s) | 53, 153 |
| TasI | AATT | 2 cut(s) | 195, 242 |
| TatI | WGTACW | 1 cut(s) | 145 |
| TfiI | GAWTC | 2 cut(s) | 69, 175 |
| TseI | GCWGC | 1 cut(s) | 98 |
| TspDTI | ATGAA | 1 cut(s) | 26 |
| XapI | RAATTY | 2 cut(s) | 195, 242 |
| XmiI | GTMKAC | 1 cut(s) | 53 |