PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68030 |
| rosa_chinensis | RchiOBHm_Chr3g0447711 |
| rosa_laevigata | RLG00000025976 |
| rosa_multiflora | Rmu_ssc0000391.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00425890 Rroxscaffold_6G00425910 |
| rosa_rugosa | Rorug02G0604100 Rorug02G0604200 Rorug02G0604300 Rorug02G0604400 Rorug02G0604400 Rorug02G0604500 Rorug02G0604600 |
| rosa_samantha | Rh3AG004400 Rh3BG004000 Rh3BG004200 Rh3CG004500 Rh3DG004400 |
| rosa_wichuraiana | Rw3G000330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 17 |
| AciI | CCGC | 2 cut(s) | 15, 105 |
| AcoI | YGGCCR | 1 cut(s) | 255 |
| AcsI | RAATTY | 1 cut(s) | 508 |
| AgsI | TTSAA | 2 cut(s) | 448, 554 |
| AluBI | AGCT | 3 cut(s) | 309, 362, 491 |
| AluI | AGCT | 3 cut(s) | 309, 362, 491 |
| Alw21I | GWGCWC | 1 cut(s) | 305 |
| AoxI | GGCC | 1 cut(s) | 255 |
| ApoI | RAATTY | 1 cut(s) | 508 |
| AspS9I | GGNCC | 1 cut(s) | 342 |
| AvaII | GGWCC | 1 cut(s) | 342 |
| Bbv12I | GWGCWC | 1 cut(s) | 305 |
| BccI | CCATC | 2 cut(s) | 221, 521 |
| BfaI | CTAG | 1 cut(s) | 440 |
| Bme18I | GGWCC | 1 cut(s) | 342 |
| BmgT120I | GGNCC | 1 cut(s) | 342 |
| BmiI | GGNNCC | 2 cut(s) | 183, 277 |
| BmsI | GCATC | 1 cut(s) | 323 |
| BsaJI | CCNNGG | 2 cut(s) | 258, 345 |
| Bse1I | ACTGG | 1 cut(s) | 38 |
| BseDI | CCNNGG | 2 cut(s) | 258, 345 |
| BseNI | ACTGG | 1 cut(s) | 38 |
| BseRI | GAGGAG | 4 cut(s) | 85, 88, 275, 278 |
| BseYI | CCCAGC | 1 cut(s) | 387 |
| BshFI | GGCC | 1 cut(s) | 257 |
| BsiHKAI | GWGCWC | 1 cut(s) | 305 |
| BsmI | GAATGC | 1 cut(s) | 582 |
| BsnI | GGCC | 1 cut(s) | 257 |
| Bsp1286I | GDGCHC | 1 cut(s) | 305 |
| BspACI | CCGC | 2 cut(s) | 15, 105 |
| BspANI | GGCC | 1 cut(s) | 257 |
| BspLI | GGNNCC | 2 cut(s) | 183, 277 |
| BsrBI | CCGCTC | 1 cut(s) | 17 |
| BsrI | ACTGG | 1 cut(s) | 38 |
| BssECI | CCNNGG | 2 cut(s) | 258, 345 |
| BssT1I | CCWWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 1 cut(s) | 196 |
| Bst6I | CTCTTC | 2 cut(s) | 90, 345 |
| BstDEI | CTNAG | 1 cut(s) | 492 |
| BsuRI | GGCC | 1 cut(s) | 257 |
| BtsI | GCAGTG | 1 cut(s) | 509 |
| BtsIMutI | CAGTG | 3 cut(s) | 67, 201, 509 |
| Cfr13I | GGNCC | 1 cut(s) | 342 |
| CviAII | CATG | 1 cut(s) | 471 |
| CviJI | RGCY | 9 cut(s) | 169, 184, 202, 257, 309, 362, 393, 491, 530 |
| CviKI_1 | RGCY | 9 cut(s) | 169, 184, 202, 257, 309, 362, 393, 491, 530 |
| DdeI | CTNAG | 1 cut(s) | 492 |
| DraI | TTTAAA | 1 cut(s) | 366 |
| EaeI | YGGCCR | 1 cut(s) | 255 |
| Eam1104I | CTCTTC | 2 cut(s) | 90, 345 |
| EarI | CTCTTC | 2 cut(s) | 90, 345 |
| Eco130I | CCWWGG | 1 cut(s) | 345 |
| Eco47I | GGWCC | 1 cut(s) | 342 |
| EcoRI | GAATTC | 1 cut(s) | 508 |
| EcoT14I | CCWWGG | 1 cut(s) | 345 |
| ErhI | CCWWGG | 1 cut(s) | 345 |
| FaeI | CATG | 1 cut(s) | 474 |
| FaiI | YATR | 5 cut(s) | 212, 340, 415, 472, 486 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 154, 186 |
| FatI | CATG | 1 cut(s) | 470 |
| FspBI | CTAG | 1 cut(s) | 440 |
| GsaI | CCCAGC | 1 cut(s) | 391 |
| HaeIII | GGCC | 1 cut(s) | 257 |
| Hin1II | CATG | 1 cut(s) | 474 |
| HincII | GTYRAC | 1 cut(s) | 85 |
| HindII | GTYRAC | 1 cut(s) | 85 |
| HindIII | AAGCTT | 2 cut(s) | 307, 360 |
| HinfI | GANTC | 3 cut(s) | 57, 382, 444 |
| Hpy166II | GTNNAC | 1 cut(s) | 85 |
| Hpy188I | TCNGA | 3 cut(s) | 208, 226, 408 |
| Hpy188III | TCNNGA | 2 cut(s) | 320, 448 |
| Hpy8I | GTNNAC | 1 cut(s) | 85 |
| HpyAV | CCTTC | 2 cut(s) | 47, 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 221 |
| HpyCH4V | TGCA | 2 cut(s) | 116, 314 |
| HpyF3I | CTNAG | 1 cut(s) | 492 |
| HpySE526I | ACGT | 1 cut(s) | 221 |
| Hsp92II | CATG | 1 cut(s) | 474 |
| LmnI | GCTCC | 1 cut(s) | 181 |
| LpnPI | CCDG | 6 cut(s) | 19, 107, 140, 292, 373, 420 |
| LweI | GCATC | 1 cut(s) | 323 |
| MaeI | CTAG | 1 cut(s) | 440 |
| MaeII | ACGT | 1 cut(s) | 221 |
| MaeIII | GTNAC | 1 cut(s) | 430 |
| MbiI | CCGCTC | 1 cut(s) | 17 |
| MboII | GAAGA | 3 cut(s) | 107, 362, 388 |
| MhlI | GDGCHC | 1 cut(s) | 305 |
| MluCI | AATT | 2 cut(s) | 23, 508 |
| MlyI | GAGTC | 2 cut(s) | 66, 376 |
| MseI | TTAA | 5 cut(s) | 5, 21, 138, 365, 583 |
| Mva1269I | GAATGC | 1 cut(s) | 582 |
| NlaIII | CATG | 1 cut(s) | 474 |
| NlaIV | GGNNCC | 2 cut(s) | 183, 277 |
| NmeAIII | GCCGAG | 1 cut(s) | 283 |
| PctI | GAATGC | 1 cut(s) | 582 |
| PfeI | GAWTC | 1 cut(s) | 444 |
| PleI | GAGTC | 2 cut(s) | 65, 376 |
| PpsI | GAGTC | 2 cut(s) | 65, 376 |
| PspFI | CCCAGC | 1 cut(s) | 387 |
| PspN4I | GGNNCC | 2 cut(s) | 183, 277 |
| PspPI | GGNCC | 1 cut(s) | 342 |
| SaqAI | TTAA | 5 cut(s) | 5, 21, 138, 365, 583 |
| Sau96I | GGNCC | 1 cut(s) | 342 |
| SchI | GAGTC | 2 cut(s) | 66, 376 |
| SduI | GDGCHC | 1 cut(s) | 305 |
| SetI | ASST | 8 cut(s) | 12, 84, 145, 224, 311, 364, 439, 493 |
| SfaNI | GCATC | 1 cut(s) | 323 |
| SinI | GGWCC | 1 cut(s) | 342 |
| Sse9I | AATT | 2 cut(s) | 23, 508 |
| SsiI | CCGC | 2 cut(s) | 15, 105 |
| SspMI | CTAG | 1 cut(s) | 440 |
| StyI | CCWWGG | 1 cut(s) | 345 |
| TaaI | ACNGT | 1 cut(s) | 196 |
| TaiI | ACGT | 1 cut(s) | 224 |
| TasI | AATT | 2 cut(s) | 23, 508 |
| TfiI | GAWTC | 1 cut(s) | 444 |
| Tru1I | TTAA | 5 cut(s) | 5, 21, 138, 365, 583 |
| Tru9I | TTAA | 5 cut(s) | 5, 21, 138, 365, 583 |
| TscAI | CASTG | 3 cut(s) | 67, 201, 509 |
| TspDTI | ATGAA | 4 cut(s) | 108, 249, 501, 550 |
| TspGWI | ACGGA | 2 cut(s) | 343, 558 |
| TspRI | CASTG | 3 cut(s) | 67, 201, 509 |
| VpaK11BI | GGWCC | 1 cut(s) | 342 |
| XapI | RAATTY | 1 cut(s) | 508 |
| XspI | CTAG | 1 cut(s) | 440 |