SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68030 |
| rosa_chinensis | RchiOBHm_Chr3g0447711 |
| rosa_laevigata | RLG00000025976 |
| rosa_multiflora | Rmu_ssc0000391.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00425890 Rroxscaffold_6G00425910 |
| rosa_rugosa | Rorug02G0604100 Rorug02G0604200 Rorug02G0604300 Rorug02G0604400 Rorug02G0604400 Rorug02G0604500 Rorug02G0604600 |
| rosa_samantha | Rh3AG004400 Rh3BG004000 Rh3BG004200 Rh3CG004500 Rh3DG004400 |
| rosa_wichuraiana | Rw3G000330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 242 |
| AccII | CGCG | 1 cut(s) | 26 |
| AciI | CCGC | 1 cut(s) | 240 |
| AcoI | YGGCCR | 1 cut(s) | 483 |
| AfaI | GTAC | 1 cut(s) | 61 |
| AgsI | TTSAA | 1 cut(s) | 314 |
| AhlI | ACTAGT | 1 cut(s) | 62 |
| Alw26I | GTCTC | 2 cut(s) | 47, 276 |
| AoxI | GGCC | 1 cut(s) | 483 |
| ApeKI | GCWGC | 1 cut(s) | 139 |
| BalI | TGGCCA | 1 cut(s) | 485 |
| BbvI | GCAGC | 1 cut(s) | 151 |
| BccI | CCATC | 1 cut(s) | 449 |
| BcoDI | GTCTC | 2 cut(s) | 47, 276 |
| BcuI | ACTAGT | 1 cut(s) | 62 |
| BfaI | CTAG | 1 cut(s) | 63 |
| BisI | GCNGC | 1 cut(s) | 140 |
| BlsI | GCNGC | 1 cut(s) | 141 |
| BmiI | GGNNCC | 2 cut(s) | 411, 505 |
| BmsI | GCATC | 1 cut(s) | 92 |
| BpuEI | CTTGAG | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 1 cut(s) | 486 |
| Bse1I | ACTGG | 1 cut(s) | 263 |
| BseDI | CCNNGG | 1 cut(s) | 486 |
| BseGI | GGATG | 1 cut(s) | 107 |
| BseMII | CTCAG | 1 cut(s) | 158 |
| BseNI | ACTGG | 1 cut(s) | 263 |
| BseRI | GAGGAG | 6 cut(s) | 26, 29, 310, 313, 316, 506 |
| BseXI | GCAGC | 1 cut(s) | 151 |
| BsgI | GTGCAG | 1 cut(s) | 158 |
| Bsh1236I | CGCG | 1 cut(s) | 26 |
| BshFI | GGCC | 1 cut(s) | 485 |
| BsmAI | GTCTC | 2 cut(s) | 47, 276 |
| BsnI | GGCC | 1 cut(s) | 485 |
| BspACI | CCGC | 1 cut(s) | 240 |
| BspANI | GGCC | 1 cut(s) | 485 |
| BspCNI | CTCAG | 1 cut(s) | 157 |
| BspFNI | CGCG | 1 cut(s) | 26 |
| BspHI | TCATGA | 1 cut(s) | 118 |
| BspLI | GGNNCC | 2 cut(s) | 411, 505 |
| BsrBI | CCGCTC | 1 cut(s) | 242 |
| BsrI | ACTGG | 1 cut(s) | 263 |
| BssECI | CCNNGG | 1 cut(s) | 486 |
| BssT1I | CCWWGG | 1 cut(s) | 486 |
| Bst4CI | ACNGT | 3 cut(s) | 136, 287, 424 |
| Bst6I | CTCTTC | 2 cut(s) | 117, 318 |
| BstDEI | CTNAG | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 107 |
| BstFNI | CGCG | 1 cut(s) | 26 |
| BstMAI | GTCTC | 2 cut(s) | 47, 276 |
| BstUI | CGCG | 1 cut(s) | 26 |
| BstV1I | GCAGC | 1 cut(s) | 151 |
| BsuRI | GGCC | 1 cut(s) | 485 |
| BtsCI | GGATG | 1 cut(s) | 107 |
| BtsIMutI | CAGTG | 2 cut(s) | 292, 429 |
| CciI | TCATGA | 1 cut(s) | 118 |
| Csp6I | GTAC | 1 cut(s) | 60 |
| CviAII | CATG | 1 cut(s) | 119 |
| CviJI | RGCY | 6 cut(s) | 142, 201, 397, 412, 430, 485 |
| CviKI_1 | RGCY | 6 cut(s) | 142, 201, 397, 412, 430, 485 |
| CviQI | GTAC | 1 cut(s) | 60 |
| DdeI | CTNAG | 1 cut(s) | 144 |
| EaeI | YGGCCR | 1 cut(s) | 483 |
| Eam1104I | CTCTTC | 2 cut(s) | 117, 318 |
| EarI | CTCTTC | 2 cut(s) | 117, 318 |
| Eco130I | CCWWGG | 1 cut(s) | 486 |
| Eco32I | GATATC | 1 cut(s) | 6 |
| EcoRV | GATATC | 1 cut(s) | 6 |
| EcoT14I | CCWWGG | 1 cut(s) | 486 |
| ErhI | CCWWGG | 1 cut(s) | 486 |
| FaeI | CATG | 1 cut(s) | 122 |
| FaiI | YATR | 5 cut(s) | 120, 131, 158, 187, 476 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 382, 414 |
| FatI | CATG | 1 cut(s) | 118 |
| Fnu4HI | GCNGC | 1 cut(s) | 140 |
| FokI | GGATG | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 1 cut(s) | 140 |
| FspBI | CTAG | 1 cut(s) | 63 |
| GluI | GCNGC | 1 cut(s) | 140 |
| HaeIII | GGCC | 1 cut(s) | 485 |
| Hin1II | CATG | 1 cut(s) | 122 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 436, 454 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| HpyAV | CCTTC | 2 cut(s) | 272, 458 |
| HpyCH4III | ACNGT | 3 cut(s) | 136, 287, 424 |
| HpyCH4V | TGCA | 3 cut(s) | 139, 185, 344 |
| HpyF3I | CTNAG | 1 cut(s) | 144 |
| Hsp92II | CATG | 1 cut(s) | 122 |
| LmnI | GCTCC | 1 cut(s) | 409 |
| LpnPI | CCDG | 4 cut(s) | 244, 335, 368, 520 |
| Lsp1109I | GCAGC | 1 cut(s) | 151 |
| LweI | GCATC | 1 cut(s) | 92 |
| MaeI | CTAG | 1 cut(s) | 63 |
| MaeIII | GTNAC | 1 cut(s) | 161 |
| MbiI | CCGCTC | 1 cut(s) | 242 |
| MboII | GAAGA | 3 cut(s) | 134, 326, 335 |
| MfeI | CAATTG | 1 cut(s) | 108 |
| MlsI | TGGCCA | 1 cut(s) | 485 |
| MluCI | AATT | 2 cut(s) | 108, 248 |
| MluNI | TGGCCA | 1 cut(s) | 485 |
| Mox20I | TGGCCA | 1 cut(s) | 485 |
| MscI | TGGCCA | 1 cut(s) | 485 |
| MseI | TTAA | 3 cut(s) | 230, 246, 366 |
| MslI | CAYNNNNRTG | 1 cut(s) | 190 |
| Msp20I | TGGCCA | 1 cut(s) | 485 |
| MunI | CAATTG | 1 cut(s) | 108 |
| MvnI | CGCG | 1 cut(s) | 26 |
| NlaIII | CATG | 1 cut(s) | 122 |
| NlaIV | GGNNCC | 2 cut(s) | 411, 505 |
| NmuCI | GTSAC | 1 cut(s) | 161 |
| PagI | TCATGA | 1 cut(s) | 118 |
| PkrI | GCNGC | 1 cut(s) | 141 |
| PspN4I | GGNNCC | 2 cut(s) | 411, 505 |
| RsaI | GTAC | 1 cut(s) | 61 |
| RsaNI | GTAC | 1 cut(s) | 60 |
| RseI | CAYNNNNRTG | 1 cut(s) | 190 |
| SaqAI | TTAA | 3 cut(s) | 230, 246, 366 |
| SatI | GCNGC | 1 cut(s) | 140 |
| SetI | ASST | 4 cut(s) | 237, 312, 373, 533 |
| SfaNI | GCATC | 1 cut(s) | 92 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 190 |
| SmlI | CTYRAG | 1 cut(s) | 44 |
| SmoI | CTYRAG | 1 cut(s) | 44 |
| SpeI | ACTAGT | 1 cut(s) | 62 |
| Sse9I | AATT | 2 cut(s) | 108, 248 |
| SsiI | CCGC | 1 cut(s) | 240 |
| SspMI | CTAG | 1 cut(s) | 63 |
| StyI | CCWWGG | 1 cut(s) | 486 |
| TaaI | ACNGT | 3 cut(s) | 136, 287, 424 |
| TasI | AATT | 2 cut(s) | 108, 248 |
| Tru1I | TTAA | 3 cut(s) | 230, 246, 366 |
| Tru9I | TTAA | 3 cut(s) | 230, 246, 366 |
| TscAI | CASTG | 2 cut(s) | 292, 429 |
| TseFI | GTSAC | 1 cut(s) | 161 |
| TseI | GCWGC | 1 cut(s) | 139 |
| Tsp45I | GTSAC | 1 cut(s) | 161 |
| TspDTI | ATGAA | 4 cut(s) | 107, 135, 336, 477 |
| TspRI | CASTG | 2 cut(s) | 292, 429 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 79 |
| XspI | CTAG | 1 cut(s) | 63 |