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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000014093 RLG00000017841 |
| rosa_multiflora | Rmu_sc0000299.1_g000004 Rmu_sc0039748.1_g000001 Rmu_sc0040042.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00117020 |
| rosa_samantha | Rh3AG032800 Rh3CG031900 Rh3DG032800 Rh4BG338100 Rh4CG353500 Rh5BG141300 Rh5DG474400 Rh6BG150500 Rh7DG249700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 166 |
| AciI | CCGC | 4 cut(s) | 17, 92, 166, 315 |
| AcsI | RAATTY | 1 cut(s) | 514 |
| AgsI | TTSAA | 2 cut(s) | 289, 495 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 491, 523 |
| AluBI | AGCT | 4 cut(s) | 61, 142, 206, 483 |
| AluI | AGCT | 4 cut(s) | 61, 142, 206, 483 |
| Alw21I | GWGCWC | 1 cut(s) | 208 |
| Alw26I | GTCTC | 1 cut(s) | 421 |
| Ama87I | CYCGRG | 1 cut(s) | 201 |
| ApeKI | GCWGC | 1 cut(s) | 83 |
| ApoI | RAATTY | 1 cut(s) | 514 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 109 |
| AsuHPI | GGTGA | 2 cut(s) | 170, 403 |
| AvaI | CYCGRG | 1 cut(s) | 201 |
| BanII | GRGCYC | 1 cut(s) | 208 |
| Bbv12I | GWGCWC | 1 cut(s) | 208 |
| BbvI | GCAGC | 1 cut(s) | 95 |
| BccI | CCATC | 5 cut(s) | 7, 140, 336, 429, 481 |
| BcoDI | GTCTC | 1 cut(s) | 421 |
| BfaI | CTAG | 2 cut(s) | 62, 535 |
| BisI | GCNGC | 2 cut(s) | 84, 315 |
| BlpI | GCTNAGC | 2 cut(s) | 383, 423 |
| BlsI | GCNGC | 2 cut(s) | 85, 316 |
| BmeT110I | CYCGRG | 1 cut(s) | 201 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 383, 423 |
| BsaJI | CCNNGG | 1 cut(s) | 131 |
| BseDI | CCNNGG | 1 cut(s) | 131 |
| BseGI | GGATG | 4 cut(s) | 18, 79, 479, 492 |
| BseMII | CTCAG | 5 cut(s) | 307, 342, 397, 414, 445 |
| BseRI | GAGGAG | 1 cut(s) | 207 |
| BseXI | GCAGC | 1 cut(s) | 95 |
| Bsh1236I | CGCG | 1 cut(s) | 166 |
| BsiHKAI | GWGCWC | 1 cut(s) | 208 |
| BsiHKCI | CYCGRG | 1 cut(s) | 201 |
| BsiSI | CCGG | 1 cut(s) | 318 |
| BsmAI | GTCTC | 1 cut(s) | 421 |
| BsmBI | CGTCTC | 1 cut(s) | 421 |
| BsoBI | CYCGRG | 1 cut(s) | 201 |
| Bsp1286I | GDGCHC | 1 cut(s) | 208 |
| Bsp143I | GATC | 1 cut(s) | 408 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 383, 423 |
| Bsp19I | CCATGG | 1 cut(s) | 131 |
| BspACI | CCGC | 4 cut(s) | 17, 92, 166, 315 |
| BspCNI | CTCAG | 5 cut(s) | 306, 341, 396, 415, 444 |
| BspFNI | CGCG | 1 cut(s) | 166 |
| BspQI | GCTCTTC | 1 cut(s) | 51 |
| BssECI | CCNNGG | 1 cut(s) | 131 |
| BssMI | GATC | 1 cut(s) | 408 |
| BssT1I | CCWWGG | 1 cut(s) | 131 |
| Bst4CI | ACNGT | 3 cut(s) | 70, 392, 415 |
| Bst6I | CTCTTC | 3 cut(s) | 51, 72, 262 |
| BstDEI | CTNAG | 6 cut(s) | 175, 293, 328, 383, 423, 431 |
| BstDSI | CCRYGG | 1 cut(s) | 131 |
| BstF5I | GGATG | 4 cut(s) | 18, 79, 479, 492 |
| BstFNI | CGCG | 1 cut(s) | 166 |
| BstKTI | GATC | 1 cut(s) | 411 |
| BstMAI | GTCTC | 1 cut(s) | 421 |
| BstMBI | GATC | 1 cut(s) | 408 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 89, 98, 320 |
| BstUI | CGCG | 1 cut(s) | 166 |
| BstV1I | GCAGC | 1 cut(s) | 95 |
| BtgI | CCRYGG | 1 cut(s) | 131 |
| BtsCI | GGATG | 4 cut(s) | 18, 79, 479, 492 |
| BtsI | GCAGTG | 2 cut(s) | 93, 301 |
| BtsIMutI | CAGTG | 2 cut(s) | 93, 301 |
| CviAII | CATG | 1 cut(s) | 132 |
| CviJI | RGCY | 9 cut(s) | 61, 130, 142, 200, 206, 382, 402, 422, 483 |
| CviKI_1 | RGCY | 9 cut(s) | 61, 130, 142, 200, 206, 382, 402, 422, 483 |
| DdeI | CTNAG | 6 cut(s) | 175, 293, 328, 383, 423, 431 |
| DpnI | GATC | 1 cut(s) | 410 |
| DpnII | GATC | 1 cut(s) | 408 |
| Eam1104I | CTCTTC | 3 cut(s) | 51, 72, 262 |
| EarI | CTCTTC | 3 cut(s) | 51, 72, 262 |
| Ecl136II | GAGCTC | 1 cut(s) | 206 |
| Eco130I | CCWWGG | 1 cut(s) | 131 |
| Eco24I | GRGCYC | 1 cut(s) | 208 |
| Eco53kI | GAGCTC | 1 cut(s) | 206 |
| Eco88I | CYCGRG | 1 cut(s) | 201 |
| EcoICRI | GAGCTC | 1 cut(s) | 206 |
| EcoT14I | CCWWGG | 1 cut(s) | 131 |
| EcoT38I | GRGCYC | 1 cut(s) | 208 |
| ErhI | CCWWGG | 1 cut(s) | 131 |
| Esp3I | CGTCTC | 1 cut(s) | 421 |
| FaeI | CATG | 1 cut(s) | 135 |
| FaiI | YATR | 5 cut(s) | 47, 133, 212, 230, 379 |
| FatI | CATG | 1 cut(s) | 131 |
| Fnu4HI | GCNGC | 2 cut(s) | 84, 315 |
| FokI | GGATG | 4 cut(s) | 25, 86, 486, 499 |
| FriOI | GRGCYC | 1 cut(s) | 208 |
| Fsp4HI | GCNGC | 2 cut(s) | 84, 315 |
| FspBI | CTAG | 2 cut(s) | 62, 535 |
| GluI | GCNGC | 2 cut(s) | 84, 315 |
| HapII | CCGG | 1 cut(s) | 318 |
| Hin1II | CATG | 1 cut(s) | 135 |
| HinfI | GANTC | 2 cut(s) | 38, 161 |
| HpaII | CCGG | 1 cut(s) | 318 |
| HphI | GGTGA | 2 cut(s) | 170, 403 |
| Hpy188I | TCNGA | 3 cut(s) | 37, 434, 458 |
| Hpy188III | TCNNGA | 2 cut(s) | 330, 449 |
| HpyAV | CCTTC | 1 cut(s) | 116 |
| HpyCH4III | ACNGT | 3 cut(s) | 70, 392, 415 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 89, 98, 320 |
| HpyF3I | CTNAG | 6 cut(s) | 175, 293, 328, 383, 423, 431 |
| Hsp92II | CATG | 1 cut(s) | 135 |
| Kzo9I | GATC | 1 cut(s) | 408 |
| LguI | GCTCTTC | 1 cut(s) | 51 |
| LmnI | GCTCC | 3 cut(s) | 139, 320, 480 |
| LpnPI | CCDG | 6 cut(s) | 280, 315, 331, 370, 376, 469 |
| Lsp1109I | GCAGC | 1 cut(s) | 95 |
| MaeI | CTAG | 2 cut(s) | 62, 535 |
| MaeIII | GTNAC | 2 cut(s) | 64, 299 |
| MalI | GATC | 1 cut(s) | 410 |
| MboI | GATC | 1 cut(s) | 408 |
| MboII | GAAGA | 3 cut(s) | 68, 89, 279 |
| MhlI | GDGCHC | 1 cut(s) | 208 |
| MluCI | AATT | 3 cut(s) | 106, 505, 514 |
| MlyI | GAGTC | 1 cut(s) | 170 |
| MmeI | TCCRAC | 1 cut(s) | 436 |
| MnlI | CCTC | 7 cut(s) | 3, 73, 91, 129, 149, 185, 459 |
| MroXI | GAANNNNTTC | 1 cut(s) | 109 |
| MspI | CCGG | 1 cut(s) | 318 |
| MvnI | CGCG | 1 cut(s) | 166 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 89, 98, 320 |
| NcoI | CCATGG | 1 cut(s) | 131 |
| NdeII | GATC | 1 cut(s) | 408 |
| NlaIII | CATG | 1 cut(s) | 135 |
| NmeAIII | GCCGAG | 1 cut(s) | 398 |
| NmuCI | GTSAC | 1 cut(s) | 299 |
| PaeR7I | CTCGAG | 1 cut(s) | 201 |
| PciSI | GCTCTTC | 1 cut(s) | 51 |
| PdmI | GAANNNNTTC | 1 cut(s) | 109 |
| PfeI | GAWTC | 1 cut(s) | 38 |
| PflFI | GACNNNGTC | 1 cut(s) | 369 |
| PkrI | GCNGC | 2 cut(s) | 85, 316 |
| PleI | GAGTC | 1 cut(s) | 169 |
| PpsI | GAGTC | 1 cut(s) | 169 |
| Psp124BI | GAGCTC | 1 cut(s) | 208 |
| PspXI | VCTCGAGB | 1 cut(s) | 201 |
| PsyI | GACNNNGTC | 1 cut(s) | 369 |
| SacI | GAGCTC | 1 cut(s) | 208 |
| SapI | GCTCTTC | 1 cut(s) | 51 |
| SatI | GCNGC | 2 cut(s) | 84, 315 |
| Sau3AI | GATC | 1 cut(s) | 408 |
| SchI | GAGTC | 1 cut(s) | 170 |
| SduI | GDGCHC | 1 cut(s) | 208 |
| SetI | ASST | 6 cut(s) | 63, 144, 160, 208, 254, 485 |
| Sfr274I | CTCGAG | 1 cut(s) | 201 |
| SlaI | CTCGAG | 1 cut(s) | 201 |
| SmlI | CTYRAG | 1 cut(s) | 201 |
| SmoI | CTYRAG | 1 cut(s) | 201 |
| Sse9I | AATT | 3 cut(s) | 106, 505, 514 |
| SsiI | CCGC | 4 cut(s) | 17, 92, 166, 315 |
| SspMI | CTAG | 2 cut(s) | 62, 535 |
| SstI | GAGCTC | 1 cut(s) | 208 |
| StyI | CCWWGG | 1 cut(s) | 131 |
| TaaI | ACNGT | 3 cut(s) | 70, 392, 415 |
| TaqI | TCGA | 2 cut(s) | 113, 202 |
| TasI | AATT | 3 cut(s) | 106, 505, 514 |
| TauI | GCSGC | 1 cut(s) | 317 |
| TfiI | GAWTC | 1 cut(s) | 38 |
| TscAI | CASTG | 2 cut(s) | 93, 308 |
| TseFI | GTSAC | 1 cut(s) | 299 |
| TseI | GCWGC | 1 cut(s) | 83 |
| Tsp45I | GTSAC | 1 cut(s) | 299 |
| TspDTI | ATGAA | 3 cut(s) | 90, 234, 512 |
| TspRI | CASTG | 2 cut(s) | 93, 308 |
| Tth111I | GACNNNGTC | 1 cut(s) | 369 |
| XapI | RAATTY | 1 cut(s) | 514 |
| XhoI | CTCGAG | 1 cut(s) | 201 |
| XmnI | GAANNNNTTC | 1 cut(s) | 109 |
| XspI | CTAG | 2 cut(s) | 62, 535 |