Rh6BG150500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
24167591 .. 24167909
319 bp
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UTR
Exon/CDS
Intron
Rh6BG150500.1

Sequence Viewer

Length: 192 bp
ATGATGCTTATGTGGAATGATGTCAAATTTGTATCTGGGCTTAAAGAGACGGAGCTTATCGATGAGATTCAGAAGAAGGATGGCGTGGAGGATGGCAGTGGTGGTGGAAGAGCTATAACTGTGGATGAAGAGGCAGCAGTGGTGGTGGAGGCAAGAAATTGTTCAAGTAAGGAAGGAGAGCCATGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

6.94

Weight (kDa)

4.45

Isoelectric Point (pI)

31.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 26
AgsI TTSAA 1 cut(s) 165
AluBI AGCT 2 cut(s) 55, 113
AluI AGCT 2 cut(s) 55, 113
Alw26I GTCTC 1 cut(s) 41
ApeKI GCWGC 1 cut(s) 134
ApoI RAATTY 1 cut(s) 26
Asp700I GAANNNNTTC 1 cut(s) 160
BbvI GCAGC 1 cut(s) 146
BccI CCATC 2 cut(s) 74, 86
BcoDI GTCTC 1 cut(s) 41
BisI GCNGC 1 cut(s) 135
BlsI GCNGC 1 cut(s) 136
Bsa29I ATCGAT 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 182
BseCI ATCGAT 1 cut(s) 60
BseDI CCNNGG 1 cut(s) 182
BseGI GGATG 3 cut(s) 85, 97, 130
BseXI GCAGC 1 cut(s) 146
BshVI ATCGAT 1 cut(s) 60
BsmAI GTCTC 1 cut(s) 41
BsmBI CGTCTC 1 cut(s) 41
Bsp19I CCATGG 1 cut(s) 182
BspDI ATCGAT 1 cut(s) 60
BspQI GCTCTTC 1 cut(s) 103
BssECI CCNNGG 1 cut(s) 182
BssT1I CCWWGG 1 cut(s) 182
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 2 cut(s) 103, 123
BstDSI CCRYGG 1 cut(s) 182
BstF5I GGATG 3 cut(s) 85, 97, 130
BstMAI GTCTC 1 cut(s) 41
BstV1I GCAGC 1 cut(s) 146
Bsu15I ATCGAT 1 cut(s) 60
BsuTUI ATCGAT 1 cut(s) 60
BtgI CCRYGG 1 cut(s) 182
BtsCI GGATG 3 cut(s) 85, 97, 130
BtsI GCAGTG 2 cut(s) 103, 144
BtsIMutI CAGTG 2 cut(s) 103, 144
ClaI ATCGAT 1 cut(s) 60
CviAII CATG 1 cut(s) 183
CviJI RGCY 4 cut(s) 40, 55, 113, 181
CviKI_1 RGCY 4 cut(s) 40, 55, 113, 181
Eam1104I CTCTTC 2 cut(s) 103, 123
EarI CTCTTC 2 cut(s) 103, 123
Eco130I CCWWGG 1 cut(s) 182
EcoT14I CCWWGG 1 cut(s) 182
ErhI CCWWGG 1 cut(s) 182
Esp3I CGTCTC 1 cut(s) 41
FaeI CATG 1 cut(s) 186
FaiI YATR 3 cut(s) 11, 116, 184
FatI CATG 1 cut(s) 182
Fnu4HI GCNGC 1 cut(s) 135
FokI GGATG 3 cut(s) 92, 104, 137
Fsp4HI GCNGC 1 cut(s) 135
GluI GCNGC 1 cut(s) 135
Hin1II CATG 1 cut(s) 186
HinfI GANTC 1 cut(s) 67
Hpy188I TCNGA 1 cut(s) 72
HpyAV CCTTC 2 cut(s) 70, 167
HpyCH4III ACNGT 1 cut(s) 121
Hsp92II CATG 1 cut(s) 186
LguI GCTCTTC 1 cut(s) 103
LmnI GCTCC 1 cut(s) 52
LpnPI CCDG 1 cut(s) 21
Lsp1109I GCAGC 1 cut(s) 146
MboII GAAGA 3 cut(s) 85, 120, 140
MluCI AATT 2 cut(s) 26, 157
MnlI CCTC 4 cut(s) 82, 124, 142, 180
MroXI GAANNNNTTC 1 cut(s) 160
MseI TTAA 1 cut(s) 42
NcoI CCATGG 1 cut(s) 182
NlaIII CATG 1 cut(s) 186
PciSI GCTCTTC 1 cut(s) 103
PdmI GAANNNNTTC 1 cut(s) 160
PfeI GAWTC 1 cut(s) 67
PkrI GCNGC 1 cut(s) 136
SapI GCTCTTC 1 cut(s) 103
SaqAI TTAA 1 cut(s) 42
SatI GCNGC 1 cut(s) 135
SetI ASST 3 cut(s) 57, 115, 191
SgeI CNNG 4 cut(s) 48, 97, 165, 177
Sse9I AATT 2 cut(s) 26, 157
StyI CCWWGG 1 cut(s) 182
TaaI ACNGT 1 cut(s) 121
TaqI TCGA 1 cut(s) 60
TasI AATT 2 cut(s) 26, 157
TfiI GAWTC 1 cut(s) 67
Tru1I TTAA 1 cut(s) 42
Tru9I TTAA 1 cut(s) 42
TscAI CASTG 2 cut(s) 103, 144
TseI GCWGC 1 cut(s) 134
TspDTI ATGAA 1 cut(s) 141
TspGWI ACGGA 1 cut(s) 65
TspRI CASTG 2 cut(s) 103, 144
XapI RAATTY 1 cut(s) 26
XmnI GAANNNNTTC 1 cut(s) 160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.