No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g29330 |
| malus_domestica | MD11G1200000.v1.1 |
| prunus_persica | Prupe.4G243100_v2.0.a1 Prupe.4G243200_v2.0.a1 |
| pyrus_communis | pycom03g13680 |
| rosa_chinensis | RchiOBHm_Chr5g0053681 |
| rosa_laevigata | RLG00000034893 RLG00000034895 |
| rosa_multiflora | Rmu_sc0003246.1_g000003 Rmu_sc0026672.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00026890 |
| rosa_rugosa | Rorug02G0290800 Rorug05G0281000 Rorug05G0281100 |
| rosa_samantha | Rh5AG352500 Rh5BG364200 Rh5CG388900 Rh5DG378800 Rh5DG378900 |
| rosa_wichuraiana | Rw5G033300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 11 |
| AciI | CCGC | 1 cut(s) | 9 |
| AcsI | RAATTY | 1 cut(s) | 118 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 15, 195, 214 |
| AgsI | TTSAA | 2 cut(s) | 28, 93 |
| AluBI | AGCT | 2 cut(s) | 151, 164 |
| AluI | AGCT | 2 cut(s) | 151, 164 |
| AoxI | GGCC | 1 cut(s) | 186 |
| ApeKI | GCWGC | 4 cut(s) | 71, 74, 161, 173 |
| ApoI | RAATTY | 1 cut(s) | 118 |
| AspS9I | GGNCC | 1 cut(s) | 187 |
| AsuHPI | GGTGA | 2 cut(s) | 127, 197 |
| BbsI | GAAGAC | 1 cut(s) | 12 |
| BbvI | GCAGC | 4 cut(s) | 83, 86, 160, 173 |
| BccI | CCATC | 1 cut(s) | 212 |
| BisI | GCNGC | 4 cut(s) | 72, 75, 162, 174 |
| BlsI | GCNGC | 4 cut(s) | 73, 76, 163, 175 |
| BmgT120I | GGNCC | 1 cut(s) | 187 |
| BpiI | GAAGAC | 1 cut(s) | 12 |
| BpmI | CTGGAG | 1 cut(s) | 17 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 15, 195, 214 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseGI | GGATG | 1 cut(s) | 223 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 15, 195, 214 |
| BseMII | CTCAG | 1 cut(s) | 73 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BseXI | GCAGC | 4 cut(s) | 83, 86, 160, 173 |
| BshFI | GGCC | 1 cut(s) | 188 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 15, 195, 214 |
| BsnI | GGCC | 1 cut(s) | 188 |
| BspACI | CCGC | 1 cut(s) | 9 |
| BspANI | GGCC | 1 cut(s) | 188 |
| BspCNI | CTCAG | 1 cut(s) | 72 |
| BsrBI | CCGCTC | 1 cut(s) | 11 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| Bst4CI | ACNGT | 1 cut(s) | 46 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 143 |
| BstDEI | CTNAG | 1 cut(s) | 59 |
| BstEII | GGTNACC | 1 cut(s) | 4 |
| BstF5I | GGATG | 1 cut(s) | 223 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 143, 170 |
| BstPI | GGTNACC | 1 cut(s) | 4 |
| BstV1I | GCAGC | 4 cut(s) | 83, 86, 160, 173 |
| BstV2I | GAAGAC | 1 cut(s) | 12 |
| BsuRI | GGCC | 1 cut(s) | 188 |
| BtsCI | GGATG | 1 cut(s) | 223 |
| BtsIMutI | CAGTG | 1 cut(s) | 67 |
| Cfr13I | GGNCC | 1 cut(s) | 187 |
| CviJI | RGCY | 5 cut(s) | 125, 151, 156, 164, 188 |
| CviKI_1 | RGCY | 5 cut(s) | 125, 151, 156, 164, 188 |
| DdeI | CTNAG | 1 cut(s) | 59 |
| Eco91I | GGTNACC | 1 cut(s) | 4 |
| EcoO109I | RGGNCCY | 1 cut(s) | 187 |
| EcoO65I | GGTNACC | 1 cut(s) | 4 |
| EcoRI | GAATTC | 1 cut(s) | 118 |
| FaiI | YATR | 2 cut(s) | 102, 194 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 140, 172 |
| Fnu4HI | GCNGC | 4 cut(s) | 72, 75, 162, 174 |
| Fsp4HI | GCNGC | 4 cut(s) | 72, 75, 162, 174 |
| GluI | GCNGC | 4 cut(s) | 72, 75, 162, 174 |
| GsuI | CTGGAG | 1 cut(s) | 17 |
| HaeIII | GGCC | 1 cut(s) | 188 |
| HindIII | AAGCTT | 1 cut(s) | 149 |
| HphI | GGTGA | 2 cut(s) | 127, 197 |
| Hpy166II | GTNNAC | 1 cut(s) | 205 |
| Hpy8I | GTNNAC | 1 cut(s) | 205 |
| HpyAV | CCTTC | 3 cut(s) | 34, 59, 99 |
| HpyCH4III | ACNGT | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 146 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 143, 170 |
| HpyF3I | CTNAG | 1 cut(s) | 59 |
| LmnI | GCTCC | 1 cut(s) | 68 |
| LpnPI | CCDG | 3 cut(s) | 47, 183, 221 |
| Lsp1109I | GCAGC | 4 cut(s) | 83, 86, 160, 173 |
| MaeIII | GTNAC | 1 cut(s) | 4 |
| MbiI | CCGCTC | 1 cut(s) | 11 |
| MboII | GAAGA | 1 cut(s) | 12 |
| MfeI | CAATTG | 1 cut(s) | 107 |
| MluCI | AATT | 2 cut(s) | 107, 118 |
| MnlI | CCTC | 3 cut(s) | 41, 68, 106 |
| MunI | CAATTG | 1 cut(s) | 107 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 143, 170 |
| PkrI | GCNGC | 4 cut(s) | 73, 76, 163, 175 |
| PspEI | GGTNACC | 1 cut(s) | 4 |
| PspPI | GGNCC | 1 cut(s) | 187 |
| SatI | GCNGC | 4 cut(s) | 72, 75, 162, 174 |
| Sau96I | GGNCC | 1 cut(s) | 187 |
| SetI | ASST | 6 cut(s) | 20, 33, 117, 153, 166, 210 |
| SgeI | CNNG | 9 cut(s) | 28, 46, 61, 155, 164, 169, 182, 196, 220 |
| Sse9I | AATT | 2 cut(s) | 107, 118 |
| SsiI | CCGC | 1 cut(s) | 9 |
| TaaI | ACNGT | 1 cut(s) | 46 |
| TasI | AATT | 2 cut(s) | 107, 118 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TseI | GCWGC | 4 cut(s) | 71, 74, 161, 173 |
| TspDTI | ATGAA | 1 cut(s) | 117 |
| TspRI | CASTG | 1 cut(s) | 67 |
| XapI | RAATTY | 1 cut(s) | 118 |