Rh5BG474200
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
75388911 .. 75398002
9092 bp
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UTR
Exon/CDS
Intron
Rh5BG474200.1

Sequence Viewer

Length: 294 bp
ATGGACAAATCTTGGCCATCAATGAGCTTTGCGTCCATGATTGATAACAAGGAACAAGGCATTCCTACAGATTTTATGATGAGCATCCAGTCACAGTCACACAAAAATGGAAACAGGGGGTCAGAGCTGCAAAAAGATGAAAATGGGGGGTCAGAATCACAGGAAGATGGAAATGGGAGATGCAAAATCTCAAATGGGACTTCTAGTACAGATGCTAAACTAGTGGAAAGCTCCGGCAGCACAACTGATGATTGCTGCTTGATGCTTCTGAGGAGGAAATCAGAGCGTGCTTGA

Protein Analysis

97

Amino Acids

10.58

Weight (kDa)

5.06

Isoelectric Point (pI)

58.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 14
AfaI GTAC 1 cut(s) 208
AhlI ACTAGT 1 cut(s) 220
AluBI AGCT 3 cut(s) 27, 127, 231
AluI AGCT 3 cut(s) 27, 127, 231
AoxI GGCC 1 cut(s) 14
ApeKI GCWGC 3 cut(s) 127, 237, 255
BalI TGGCCA 1 cut(s) 16
BbvI GCAGC 3 cut(s) 114, 242, 249
BccI CCATC 2 cut(s) 25, 161
BcuI ACTAGT 1 cut(s) 220
BfaI CTAG 2 cut(s) 204, 221
BfmI CTRYAG 1 cut(s) 66
BisI GCNGC 3 cut(s) 128, 238, 256
BlsI GCNGC 3 cut(s) 129, 239, 257
BmsI GCATC 4 cut(s) 93, 170, 202, 252
BsaBI GATNNNNATC 1 cut(s) 83
Bse1I ACTGG 1 cut(s) 88
Bse8I GATNNNNATC 1 cut(s) 83
BseGI GGATG 1 cut(s) 84
BseJI GATNNNNATC 1 cut(s) 83
BseMII CTCAG 1 cut(s) 260
BseNI ACTGG 1 cut(s) 88
BseRI GAGGAG 1 cut(s) 286
BseXI GCAGC 3 cut(s) 114, 242, 249
BshFI GGCC 1 cut(s) 16
BsiSI CCGG 1 cut(s) 234
BslFI GGGAC 1 cut(s) 211
BsmFI GGGAC 1 cut(s) 211
BsmI GAATGC 1 cut(s) 60
BsnI GGCC 1 cut(s) 16
BspANI GGCC 1 cut(s) 16
BspCNI CTCAG 1 cut(s) 261
BsrI ACTGG 1 cut(s) 88
Bst4CI ACNGT 1 cut(s) 96
BstC8I GCNNGC 1 cut(s) 288
BstDEI CTNAG 1 cut(s) 269
BstF5I GGATG 1 cut(s) 84
BstMWI GCNNNNNNNGC 1 cut(s) 237
BstSFI CTRYAG 1 cut(s) 66
BstV1I GCAGC 3 cut(s) 114, 242, 249
BsuRI GGCC 1 cut(s) 16
BtsCI GGATG 1 cut(s) 84
Cac8I GCNNGC 1 cut(s) 288
CseI GACGC 1 cut(s) 21
Csp6I GTAC 1 cut(s) 207
CviAII CATG 1 cut(s) 37
CviJI RGCY 4 cut(s) 16, 27, 127, 231
CviKI_1 RGCY 4 cut(s) 16, 27, 127, 231
CviQI GTAC 1 cut(s) 207
DdeI CTNAG 1 cut(s) 269
EaeI YGGCCR 1 cut(s) 14
FaeI CATG 1 cut(s) 40
FaiI YATR 2 cut(s) 38, 77
FaqI GGGAC 1 cut(s) 211
FatI CATG 1 cut(s) 36
Fnu4HI GCNGC 3 cut(s) 128, 238, 256
FokI GGATG 1 cut(s) 71
Fsp4HI GCNGC 3 cut(s) 128, 238, 256
FspBI CTAG 2 cut(s) 204, 221
GluI GCNGC 3 cut(s) 128, 238, 256
HaeIII GGCC 1 cut(s) 16
HapII CCGG 1 cut(s) 234
HgaI GACGC 1 cut(s) 21
Hin1II CATG 1 cut(s) 40
HinfI GANTC 1 cut(s) 155
HpaII CCGG 1 cut(s) 234
Hpy188I TCNGA 4 cut(s) 124, 154, 270, 283
HpyCH4III ACNGT 1 cut(s) 96
HpyCH4V TGCA 2 cut(s) 130, 183
HpyF10VI GCNNNNNNNGC 1 cut(s) 237
HpyF3I CTNAG 1 cut(s) 269
Hsp92II CATG 1 cut(s) 40
LmnI GCTCC 1 cut(s) 236
LpnPI CCDG 4 cut(s) 100, 101, 146, 247
Lsp1109I GCAGC 3 cut(s) 114, 242, 249
LweI GCATC 4 cut(s) 93, 170, 202, 252
MaeI CTAG 2 cut(s) 204, 221
MaeIII GTNAC 2 cut(s) 90, 96
MboII GAAGA 1 cut(s) 176
MlsI TGGCCA 1 cut(s) 16
MluNI TGGCCA 1 cut(s) 16
MnlI CCTC 2 cut(s) 264, 267
Mox20I TGGCCA 1 cut(s) 16
MscI TGGCCA 1 cut(s) 16
MslI CAYNNNNRTG 1 cut(s) 105
Msp20I TGGCCA 1 cut(s) 16
MspI CCGG 1 cut(s) 234
Mva1269I GAATGC 1 cut(s) 60
MwoI GCNNNNNNNGC 1 cut(s) 237
NlaIII CATG 1 cut(s) 40
NmuCI GTSAC 2 cut(s) 90, 96
PctI GAATGC 1 cut(s) 60
PfeI GAWTC 1 cut(s) 155
PkrI GCNGC 3 cut(s) 129, 239, 257
RsaI GTAC 1 cut(s) 208
RsaNI GTAC 1 cut(s) 207
RseI CAYNNNNRTG 1 cut(s) 105
SatI GCNGC 3 cut(s) 128, 238, 256
SetI ASST 3 cut(s) 29, 129, 233
SfaNI GCATC 4 cut(s) 93, 170, 202, 252
SfcI CTRYAG 1 cut(s) 66
SmiMI CAYNNNNRTG 1 cut(s) 105
SpeI ACTAGT 1 cut(s) 220
SspMI CTAG 2 cut(s) 204, 221
TaaI ACNGT 1 cut(s) 96
TatI WGTACW 1 cut(s) 206
TfiI GAWTC 1 cut(s) 155
TseFI GTSAC 2 cut(s) 90, 96
TseI GCWGC 3 cut(s) 127, 237, 255
Tsp45I GTSAC 2 cut(s) 90, 96
TspDTI ATGAA 1 cut(s) 153
XspI CTAG 2 cut(s) 204, 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.