Rh5CG482400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
67270088 .. 67270484
397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG482400.1

Sequence Viewer

Length: 321 bp
ATGATCAGGTGGAGTCTTCGCTGGTGGGCGTCGTTGAGGCCACTGAGATCGCTATTCGGGCTGGAATCGCTGGTGGAGTCTTCGCTTGATTTTTTCGTCGTTAAGGCCACTGAGATCGCTGTTCGGGCTGGAGTCGTCGTCCTGTCCCTGTCGGCGTCAAGATGGCCGGAGTCAGAGGAGCTGATGGAGTCTGGGTCAAATCTGGTGTATGGTTATGGGTTTGGATATGTGTATGGCGGAGAGAGAGAGAGTGATAGTTGGAGAGATATTAGACTGGGGGTAAAAATGTCACTTAGGTTTAAATTGGGTAAGTGGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

106

Amino Acids

12.15

Weight (kDa)

9.15

Isoelectric Point (pI)

59.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 237
AcoI YGGCCR 1 cut(s) 164
AcyI GRCGYC 2 cut(s) 29, 155
AluBI AGCT 1 cut(s) 181
AluI AGCT 1 cut(s) 181
AoxI GGCC 3 cut(s) 38, 105, 164
BbsI GAAGAC 2 cut(s) 8, 72
BccI CCATC 2 cut(s) 156, 178
BclI TGATCA 1 cut(s) 3
BmrI ACTGGG 1 cut(s) 284
BmuI ACTGGG 1 cut(s) 284
BpiI GAAGAC 2 cut(s) 8, 72
BpmI CTGGAG 1 cut(s) 150
BsaHI GRCGYC 2 cut(s) 29, 155
BsaXI ACNNNNNCTCC 4 cut(s) 123, 153, 179, 209
Bse1I ACTGG 1 cut(s) 279
BseMII CTCAG 2 cut(s) 35, 102
BseNI ACTGG 1 cut(s) 279
BseRI GAGGAG 1 cut(s) 191
BshFI GGCC 3 cut(s) 40, 107, 166
BsiSI CCGG 1 cut(s) 167
BslFI GGGAC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 130
BsnI GGCC 3 cut(s) 40, 107, 166
Bsp143I GATC 3 cut(s) 3, 47, 114
BspACI CCGC 1 cut(s) 237
BspANI GGCC 3 cut(s) 40, 107, 166
BspCNI CTCAG 2 cut(s) 36, 103
BsrI ACTGG 1 cut(s) 279
BssMI GATC 3 cut(s) 3, 47, 114
BssNI GRCGYC 2 cut(s) 29, 155
BstACI GRCGYC 2 cut(s) 29, 155
BstDEI CTNAG 3 cut(s) 44, 111, 293
BstKTI GATC 3 cut(s) 6, 50, 117
BstMBI GATC 3 cut(s) 3, 47, 114
BstMWI GCNNNNNNNGC 3 cut(s) 58, 67, 125
BstV2I GAAGAC 2 cut(s) 8, 72
BsuRI GGCC 3 cut(s) 40, 107, 166
BtsIMutI CAGTG 2 cut(s) 41, 108
CseI GACGC 2 cut(s) 18, 144
CviJI RGCY 6 cut(s) 40, 61, 107, 128, 166, 181
CviKI_1 RGCY 6 cut(s) 40, 61, 107, 128, 166, 181
DdeI CTNAG 3 cut(s) 44, 111, 293
DpnI GATC 3 cut(s) 5, 49, 116
DpnII GATC 3 cut(s) 3, 47, 114
DraI TTTAAA 1 cut(s) 301
EaeI YGGCCR 1 cut(s) 164
EciI GGCGGA 1 cut(s) 252
FaiI YATR 4 cut(s) 210, 216, 228, 234
FaqI GGGAC 1 cut(s) 130
FbaI TGATCA 1 cut(s) 3
GsuI CTGGAG 1 cut(s) 150
HaeIII GGCC 3 cut(s) 40, 107, 166
HapII CCGG 1 cut(s) 167
HgaI GACGC 2 cut(s) 18, 144
Hin1I GRCGYC 2 cut(s) 29, 155
HinfI GANTC 6 cut(s) 13, 65, 77, 132, 170, 188
HpaII CCGG 1 cut(s) 167
Hpy188I TCNGA 1 cut(s) 175
Hpy188III TCNNGA 1 cut(s) 159
Hpy99I CGWCG 3 cut(s) 34, 101, 140
HpyF10VI GCNNNNNNNGC 3 cut(s) 58, 67, 125
HpyF3I CTNAG 3 cut(s) 44, 111, 293
Hsp92I GRCGYC 2 cut(s) 29, 155
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 3 cut(s) 3, 47, 114
LmnI GCTCC 1 cut(s) 178
MaeIII GTNAC 1 cut(s) 288
MalI GATC 3 cut(s) 5, 49, 116
MboI GATC 3 cut(s) 3, 47, 114
MboII GAAGA 2 cut(s) 8, 72
MluCI AATT 1 cut(s) 302
MlyI GAGTC 5 cut(s) 22, 86, 141, 179, 197
MmeI TCCRAC 1 cut(s) 239
MnlI CCTC 2 cut(s) 30, 169
MseI TTAA 3 cut(s) 102, 300, 319
MspI CCGG 1 cut(s) 167
MwoI GCNNNNNNNGC 3 cut(s) 58, 67, 125
NdeII GATC 3 cut(s) 3, 47, 114
NmuCI GTSAC 1 cut(s) 288
PfeI GAWTC 1 cut(s) 65
PleI GAGTC 5 cut(s) 21, 85, 140, 178, 196
PpsI GAGTC 5 cut(s) 21, 85, 140, 178, 196
SaqAI TTAA 3 cut(s) 102, 300, 319
Sau3AI GATC 3 cut(s) 3, 47, 114
SchI GAGTC 5 cut(s) 22, 86, 141, 179, 197
SetI ASST 3 cut(s) 11, 183, 299
Sse9I AATT 1 cut(s) 302
SsiI CCGC 1 cut(s) 237
TasI AATT 1 cut(s) 302
TfiI GAWTC 1 cut(s) 65
Tru1I TTAA 3 cut(s) 102, 300, 319
Tru9I TTAA 3 cut(s) 102, 300, 319
TscAI CASTG 2 cut(s) 48, 115
TseFI GTSAC 1 cut(s) 288
Tsp45I GTSAC 1 cut(s) 288
TspRI CASTG 2 cut(s) 48, 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.