Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0003665

Physical Location & Seq

Genomic Coordinates Forward (+)

8182138 .. 8187531

Gene Structure 5394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG090500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGCAACAAGAAGCTCGAGCTCAGAAGCTTTGACGACCACTCTGTCCAACTCAATCCAAGCTCTGGGTCGAGGCTTTGATGTGACTTCGGATATTAGGCTTCTGTATTGCAAAGGAGCACCTGGGTCAAGGCTTGTGAATCTGGATGAGAGTGGGGCTAAAGATCTTGCTGTTTCTGATGGGGTTGTGGTGCCAAATGTGCCTGCAGATATTGACTGCTCACCTGGGAAGAGAACCATTGAGAGAGTCCCTGTCTGTAGCTTCCATGAGATGGCAGAATACTTTAATAAGAAATCAGGTATATCAACCCGAATTCCCCTGGGAAGCTTCAATGCCATGTTTAATTTCACCGGTTCTTGGCAAGTTGATGCAGCAGCAACCAAATCCCTTGCTATGGTTGGATACTTTATTCCCCTATACAAAGTCAACTTAGAAACAGAAAATTTGGTTTTGCGTGATGAAATCAAGCGTGCTGTTCCTTACTCTTGGGATCCTGCAGCCTTGGCAAGTTTCATTGAGAACTTTGGTACACATATAGTCACATCTGCGACAATTGGTGGGAGAGATGTGGTCTATATCAGGCAGCACCAGTCATCTCCTTTATCATTATCGGACATTCAGAATTATGTGAAAGACATTGGTGATGATAGGTTTCTGGACTCAAAAGCCCAGTCAAGTGCTGGCCCCTTAAAATACAAGGACAAGGATGTTACGGTCATCTTCAGGAGAAGGGGAGGTGATGATCTTGAGCAGAGTCATTCCAAGTGGGCGGAGACAGTACAACTAGCACCAGATGTGATCAATATGACATTTACACCTATTGTTTCTCTTCTTGAAGGAGTGCCTGGAATAAAGCACTTGAGCCGTGCAATTGAGTTATATCTAGAGTACAAGCCTCCAATTGAAGATCTGCAGTATTTCTTGGACTTTCAAATTGCTCAGGTTTGGGCCCCAGAGCAAAATAACCTGCAAAGGAAAGAACCTGTCTGTTCATCCCTTCAATTCAGCTTGATGGGTCCCAAGCTTTATATCAGTCCGGATCAGGTAACAGTAGGCCGTAAGCCTGTCACAGGGCTCAGACTTAACCTAGAAGGCAACAAGCAGAACCGACTTGCTATACATTTGCAGCATCTAGTGTCTCTTCCCAAGATTCTTCAACCCCATTGGGATGCCCATATGGCCATAGGTGCACCTAGGTGGCAAGGTCCAGAGGAGCAAGACAGTCGTTGGTTTGAGCCGATCAAGTGGAAGAACTTCTCCCACGTAAGCACTGCACCAATAGAGCACGTAGAGACTTCTATTGGTGACCTCTCTGGTGTTCACATTGTCACAGGCGCTCAGCTTGGTGTTTGGGATTTTGGTGCCAAAAATGTTTTGCACCTCAAACTCCTCTTTTCAAAAGTACCAAACTGCACAATCCGACGGTCTGTGTGGGATCACAGTCCTGCCGCCCCTTCTTCTGCACAGAGGCCTGATGGTTCTTCTTCATCACATTCAAATAGCAGAAACTCTGATGACAAAAAGGACAAACTAGCAAAGTTAGTAGACTTGACAGAAATGTCAAAGGGGCCGCAAGATATTCCTGGACATTGGTTAGTCACAGGAGCTAAGCTTGGAGTGGACAAGGGAAAGATTGTATTGCGTGTAAAATATTCCTTGCTAAACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0010337 GO:0010565 GO:0010817 GO:0012501 GO:0019222 GO:0031323 GO:0032350 GO:0033554 GO:0034050 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0062012 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MACPF

Protein Analysis

556

Amino Acids

61.57

Weight (kDa)

8.11

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MACPF	PF01823	108 - 294	7.6e-31	MAC/Perforin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003665)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29690
fragaria_vesca	FvH4_6g10020 FvH4_6g10020 FvH4_6g10020 FvH4_7g07810 FvH4_7g07810 FvH4_7g07810
malus_domestica	MD04G1173300.v1.1 MD05G1294000.v1.1 MD12G1186700.v1.1
prunus_persica	Prupe.4G070000_v2.0.a1 Prupe.6G292200_v2.0.a1
pyrus_communis	pycom05g27130 pycom10g22730 pycom12g17520
rosa_chinensis	RchiOBHm_Chr3g0460701 RchiOBHm_Chr5g0012351
rosa_laevigata	RLG00000024987 RLG00000031906
rosa_multiflora	Rmu_co8488383.1_g000001 Rmu_sc0011069.1_g000008
rosa_roxburghii	Rroxscaffold_1G00064310 Rroxscaffold_6G00419290
rosa_rugosa	Rorug03G0045300 Rorug05G0000700
rosa_samantha	Rh3AG102800 Rh3BG106500 Rh3CG108400 Rh3DG108000 Rh5AG094800 Rh5BG091000 Rh5CG104100 Rh5DG090500
rosa_wichuraiana	Rw3G008750 Rw5G008280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	43, 1558
Acc36I	ACCTGC	1 cut(s)	975
AccB1I	GGYRCC	2 cut(s)	190, 1361
AccB7I	CCANNNNNTGG	2 cut(s)	64, 271
AccI	GTMKAC	1 cut(s)	1545
AccIII	TCCGGA	1 cut(s)	1036
AciI	CCGC	3 cut(s)	770, 1449, 1571
AclWI	GGATC	4 cut(s)	485, 498, 1047, 1443
AcoI	YGGCCR	1 cut(s)	1179
AcsI	RAATTY	2 cut(s)	312, 442
AcuI	CTGAAG	1 cut(s)	706
AfaI	GTAC	4 cut(s)	529, 780, 890, 1404
AfiI	CCNNNNNNNGG	5 cut(s)	64, 271, 357, 394, 1070
AgeI	ACCGGT	1 cut(s)	350
AgsI	TTSAA	8 cut(s)	331, 836, 905, 932, 1001, 1157, 1398, 1497
AjnI	CCWGG	5 cut(s)	121, 223, 318, 844, 1582
AleI	CACNNNNGTG	1 cut(s)	1195
Alw21I	GWGCWC	4 cut(s)	23, 121, 1192, 1287
Alw26I	GTCTC	3 cut(s)	767, 1143, 1286
Alw44I	GTGCAC	1 cut(s)	1188
AlwI	GGATC	4 cut(s)	485, 498, 1047, 1443
Ama87I	CYCGRG	1 cut(s)	16
Aor13HI	TCCGGA	1 cut(s)	1036
AoxI	GGCC	6 cut(s)	682, 948, 1054, 1179, 1469, 1568
ApaI	GGGCCC	1 cut(s)	952
ApaLI	GTGCAC	1 cut(s)	1188
ApeKI	GCWGC	5 cut(s)	371, 374, 497, 583, 1126
ApoI	RAATTY	2 cut(s)	312, 442
ArsI	GACNNNNNNTTYG	2 cut(s)	656, 688
AsiGI	ACCGGT	1 cut(s)	350
Asp700I	GAANNNNTTC	1 cut(s)	1253
AspA2I	CCTAGG	1 cut(s)	1193
AspLEI	GCGC	1 cut(s)	1337
AspS9I	GGNCC	6 cut(s)	683, 948, 949, 1016, 1205, 1568
AsuHPI	GGTGA	5 cut(s)	213, 340, 653, 749, 1316
AvaI	CYCGRG	1 cut(s)	16
AvaII	GGWCC	2 cut(s)	1016, 1205
AvrII	CCTAGG	1 cut(s)	1193
BaeGI	GKGCMC	2 cut(s)	952, 1192
BalI	TGGCCA	1 cut(s)	1181
BamHI	GGATCC	1 cut(s)	490
BanI	GGYRCC	2 cut(s)	190, 1361
BanII	GRGCYC	3 cut(s)	23, 952, 1077
Bbv12I	GWGCWC	4 cut(s)	23, 121, 1192, 1287
BbvI	GCAGC	5 cut(s)	383, 386, 509, 595, 1138
BccI	CCATC	4 cut(s)	173, 265, 1006, 1469
BceAI	ACGGC	2 cut(s)	849, 1041
BcgI	CGANNNNNNTGC	2 cut(s)	1205, 1239
BciT130I	CCWGG	5 cut(s)	123, 225, 320, 846, 1584
BciVI	GTATCC	1 cut(s)	395
BclI	TGATCA	1 cut(s)	798
BcoDI	GTCTC	3 cut(s)	767, 1143, 1286
BfaI	CTAG	6 cut(s)	785, 884, 1088, 1133, 1194, 1532
BfmI	CTRYAG	4 cut(s)	204, 256, 495, 911
BfoI	RGCGCY	1 cut(s)	1338
BfuAI	ACCTGC	1 cut(s)	975
BfuI	GTATCC	1 cut(s)	395
BglI	GCCNNNNNGGC	1 cut(s)	1178
BglII	AGATCT	2 cut(s)	163, 907
BisI	GCNGC	7 cut(s)	372, 375, 498, 584, 1127, 1449, 1571
BlnI	CCTAGG	1 cut(s)	1193
BlpI	GCTNAGC	2 cut(s)	1338, 1608
BlsI	GCNGC	7 cut(s)	373, 376, 499, 585, 1128, 1450, 1572
Bme1390I	CCNGG	5 cut(s)	123, 225, 320, 846, 1584
Bme18I	GGWCC	2 cut(s)	1016, 1205
BmeT110I	CYCGRG	1 cut(s)	16
BmgT120I	GGNCC	6 cut(s)	683, 948, 949, 1016, 1205, 1568
BmiI	GGNNCC	9 cut(s)	192, 492, 685, 950, 951, 1017, 1018, 1363, 1569
BmrFI	CCNGG	5 cut(s)	123, 225, 320, 846, 1584
BmrI	ACTGGG	1 cut(s)	664
BmsI	GCATC	3 cut(s)	358, 1138, 1159
BmuI	ACTGGG	1 cut(s)	664
Bpu10I	CCTNAGC	1 cut(s)	939
Bpu1102I	GCTNAGC	2 cut(s)	1338, 1608
BpuEI	CTTGAG	2 cut(s)	767, 880
BsaAI	YACGTR	2 cut(s)	1264, 1288
BsaJI	CCNNGG	6 cut(s)	122, 224, 318, 319, 501, 1193
BsaWI	WCCGGW	2 cut(s)	350, 1036
Bsc4I	CCNNNNNNNGG	5 cut(s)	64, 271, 357, 394, 1070
Bse118I	RCCGGY	1 cut(s)	350
Bse1I	ACTGG	2 cut(s)	589, 670
BseAI	TCCGGA	1 cut(s)	1036
BseBI	CCWGG	5 cut(s)	123, 225, 320, 846, 1584
BseDI	CCNNGG	6 cut(s)	122, 224, 318, 319, 501, 1193
BseGI	GGATG	4 cut(s)	151, 712, 992, 1174
BseLI	CCNNNNNNNGG	5 cut(s)	64, 271, 357, 394, 1070
BseMII	CTCAG	4 cut(s)	36, 953, 1090, 1352
BseNI	ACTGG	2 cut(s)	589, 670
BseRI	GAGGAG	2 cut(s)	1226, 1379
BseSI	GKGCMC	2 cut(s)	952, 1192
BseXI	GCAGC	5 cut(s)	383, 386, 509, 595, 1138
BsgI	GTGCAG	3 cut(s)	1257, 1396, 1446
BshFI	GGCC	6 cut(s)	684, 950, 1056, 1181, 1471, 1570
BshNI	GGYRCC	2 cut(s)	190, 1361
BshTI	ACCGGT	1 cut(s)	350
BsiHKAI	GWGCWC	4 cut(s)	23, 121, 1192, 1287
BsiHKCI	CYCGRG	1 cut(s)	16
BsiSI	CCGG	2 cut(s)	351, 1037
BslFI	GGGAC	2 cut(s)	233, 1002
BslI	CCNNNNNNNGG	5 cut(s)	64, 271, 357, 394, 1070
BsmAI	GTCTC	3 cut(s)	767, 1143, 1286
BsmFI	GGGAC	2 cut(s)	233, 1002
BsnI	GGCC	6 cut(s)	684, 950, 1056, 1181, 1471, 1570
BsoBI	CYCGRG	1 cut(s)	16
Bsp120I	GGGCCC	1 cut(s)	948
Bsp1286I	GDGCHC	6 cut(s)	23, 121, 952, 1077, 1192, 1287
Bsp13I	TCCGGA	1 cut(s)	1036
Bsp143I	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
Bsp1720I	GCTNAGC	2 cut(s)	1338, 1608
BspACI	CCGC	3 cut(s)	770, 1449, 1571
BspANI	GGCC	6 cut(s)	684, 950, 1056, 1181, 1471, 1570
BspCNI	CTCAG	4 cut(s)	35, 952, 1089, 1351
BspEI	TCCGGA	1 cut(s)	1036
BspLI	GGNNCC	9 cut(s)	192, 492, 685, 950, 951, 1017, 1018, 1363, 1569
BspMAI	CTGCAG	3 cut(s)	208, 499, 915
BspMI	ACCTGC	1 cut(s)	975
BspPI	GGATC	4 cut(s)	485, 498, 1047, 1443
BspT107I	GGYRCC	2 cut(s)	190, 1361
BsrFI	RCCGGY	1 cut(s)	350
BsrI	ACTGG	2 cut(s)	589, 670
BssAI	RCCGGY	1 cut(s)	350
BssECI	CCNNGG	6 cut(s)	122, 224, 318, 319, 501, 1193
BssMI	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
BssT1I	CCWWGG	2 cut(s)	501, 1193
Bst2UI	CCWGG	5 cut(s)	123, 225, 320, 846, 1584
Bst4CI	ACNGT	6 cut(s)	715, 778, 1051, 1223, 1425, 1442
Bst6I	CTCTTC	3 cut(s)	224, 834, 1146
BstBAI	YACGTR	2 cut(s)	1264, 1288
BstC8I	GCNNGC	3 cut(s)	204, 471, 682
BstDEI	CTNAG	6 cut(s)	22, 430, 939, 1076, 1338, 1608
BstEII	GGTNACC	1 cut(s)	1304
BstENI	CCTNNNNNAGG	1 cut(s)	1068
BstF5I	GGATG	4 cut(s)	151, 712, 992, 1174
BstH2I	RGCGCY	1 cut(s)	1338
BstHHI	GCGC	1 cut(s)	1337
BstKTI	GATC	8 cut(s)	166, 493, 745, 801, 910, 1042, 1242, 1438
BstMAI	GTCTC	3 cut(s)	767, 1143, 1286
BstMBI	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
BstMWI	GCNNNNNNNGC	4 cut(s)	199, 503, 1178, 1187
BstNI	CCWGG	5 cut(s)	123, 225, 320, 846, 1584
BstPI	GGTNACC	1 cut(s)	1304
BstSCI	CCNGG	5 cut(s)	121, 223, 318, 844, 1582
BstSFI	CTRYAG	4 cut(s)	204, 256, 495, 911
BstSLI	GKGCMC	2 cut(s)	952, 1192
BstV1I	GCAGC	5 cut(s)	383, 386, 509, 595, 1138
BstX2I	RGATCY	3 cut(s)	163, 490, 907
BstYI	RGATCY	3 cut(s)	163, 490, 907
BsuI	GTATCC	1 cut(s)	395
BsuRI	GGCC	6 cut(s)	684, 950, 1056, 1181, 1471, 1570
BtsCI	GGATG	4 cut(s)	151, 712, 992, 1174
BtsI	GCAGTG	1 cut(s)	1269
BtsIMutI	CAGTG	1 cut(s)	1269
BveI	ACCTGC	1 cut(s)	975
Cac8I	GCNNGC	3 cut(s)	204, 471, 682
CfoI	GCGC	1 cut(s)	1337
Cfr10I	RCCGGY	1 cut(s)	350
Cfr13I	GGNCC	6 cut(s)	683, 948, 949, 1016, 1205, 1568
Csp6I	GTAC	4 cut(s)	528, 779, 889, 1403
CspAI	ACCGGT	1 cut(s)	350
CviAII	CATG	2 cut(s)	266, 337
CviQI	GTAC	4 cut(s)	528, 779, 889, 1403
DdeI	CTNAG	6 cut(s)	22, 430, 939, 1076, 1338, 1608
DpnI	GATC	8 cut(s)	165, 492, 744, 800, 909, 1041, 1241, 1437
DpnII	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
DrdI	GACNNNNNNGTC	2 cut(s)	43, 1558
DseDI	GACNNNNNNGTC	2 cut(s)	43, 1558
EaeI	YGGCCR	1 cut(s)	1179
Eam1104I	CTCTTC	3 cut(s)	224, 834, 1146
EarI	CTCTTC	3 cut(s)	224, 834, 1146
EciI	GGCGGA	1 cut(s)	785
Ecl136II	GAGCTC	1 cut(s)	21
Eco130I	CCWWGG	2 cut(s)	501, 1193
Eco147I	AGGCCT	1 cut(s)	1471
Eco24I	GRGCYC	3 cut(s)	23, 952, 1077
Eco47I	GGWCC	2 cut(s)	1016, 1205
Eco53kI	GAGCTC	1 cut(s)	21
Eco57I	CTGAAG	1 cut(s)	706
Eco88I	CYCGRG	1 cut(s)	16
Eco91I	GGTNACC	1 cut(s)	1304
EcoICRI	GAGCTC	1 cut(s)	21
EcoNI	CCTNNNNNAGG	1 cut(s)	1068
EcoO109I	RGGNCCY	2 cut(s)	949, 1016
EcoO65I	GGTNACC	1 cut(s)	1304
EcoRI	GAATTC	1 cut(s)	312
EcoRII	CCWGG	5 cut(s)	121, 223, 318, 844, 1582
EcoT14I	CCWWGG	2 cut(s)	501, 1193
EcoT38I	GRGCYC	3 cut(s)	23, 952, 1077
ErhI	CCWWGG	2 cut(s)	501, 1193
FaeI	CATG	2 cut(s)	269, 340
FaqI	GGGAC	2 cut(s)	233, 1002
FatI	CATG	2 cut(s)	265, 336
FauNDI	CATATG	1 cut(s)	1176
FbaI	TGATCA	1 cut(s)	798
FblI	GTMKAC	1 cut(s)	1545
Fnu4HI	GCNGC	7 cut(s)	372, 375, 498, 584, 1127, 1449, 1571
FokI	GGATG	4 cut(s)	158, 719, 979, 1181
FriOI	GRGCYC	3 cut(s)	23, 952, 1077
Fsp4HI	GCNGC	7 cut(s)	372, 375, 498, 584, 1127, 1449, 1571
FspBI	CTAG	6 cut(s)	785, 884, 1088, 1133, 1194, 1532
GlaI	GCGC	1 cut(s)	1336
GluI	GCNGC	7 cut(s)	372, 375, 498, 584, 1127, 1449, 1571
HaeII	RGCGCY	1 cut(s)	1338
HaeIII	GGCC	6 cut(s)	684, 950, 1056, 1181, 1471, 1570
HapII	CCGG	2 cut(s)	351, 1037
HhaI	GCGC	1 cut(s)	1337
Hin1II	CATG	2 cut(s)	269, 340
Hin6I	GCGC	1 cut(s)	1335
HinP1I	GCGC	1 cut(s)	1335
HincII	GTYRAC	1 cut(s)	427
HindII	GTYRAC	1 cut(s)	427
HindIII	AAGCTT	4 cut(s)	27, 325, 1022, 1610
HinfI	GANTC	5 cut(s)	139, 246, 659, 754, 1150
HpaII	CCGG	2 cut(s)	351, 1037
HphI	GGTGA	5 cut(s)	213, 340, 653, 749, 1316
Hpy166II	GTNNAC	6 cut(s)	427, 530, 1190, 1321, 1546, 1621
Hpy188I	TCNGA	8 cut(s)	25, 91, 178, 613, 621, 1079, 1421, 1513
Hpy188III	TCNNGA	8 cut(s)	143, 656, 724, 746, 833, 884, 1037, 1208
Hpy8I	GTNNAC	6 cut(s)	427, 530, 1190, 1321, 1546, 1621
Hpy99I	CGWCG	1 cut(s)	1425
HpyAV	CCTTC	5 cut(s)	723, 830, 1007, 1085, 1464
HpyCH4III	ACNGT	6 cut(s)	715, 778, 1051, 1223, 1425, 1442
HpyCH4IV	ACGT	2 cut(s)	1263, 1287
HpyF10VI	GCNNNNNNNGC	4 cut(s)	199, 503, 1178, 1187
HpyF3I	CTNAG	6 cut(s)	22, 430, 939, 1076, 1338, 1608
HpySE526I	ACGT	2 cut(s)	1263, 1287
Hsp92II	CATG	2 cut(s)	269, 340
HspAI	GCGC	1 cut(s)	1335
KflI	GGGWCCC	1 cut(s)	1016
Kpn2I	TCCGGA	1 cut(s)	1036
Ksp22I	TGATCA	1 cut(s)	798
Kzo9I	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
LmnI	GCTCC	3 cut(s)	116, 1213, 1604
Lsp1109I	GCAGC	5 cut(s)	383, 386, 509, 595, 1138
LweI	GCATC	3 cut(s)	358, 1138, 1159
MaeI	CTAG	6 cut(s)	785, 884, 1088, 1133, 1194, 1532
MaeII	ACGT	2 cut(s)	1263, 1287
MaeIII	GTNAC	8 cut(s)	82, 538, 709, 1045, 1066, 1304, 1327, 1597
MalI	GATC	8 cut(s)	165, 492, 744, 800, 909, 1041, 1241, 1437
MboI	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
MfeI	CAATTG	3 cut(s)	552, 870, 900
MflI	RGATCY	3 cut(s)	163, 490, 907
MhlI	GDGCHC	6 cut(s)	23, 121, 952, 1077, 1192, 1287
MlsI	TGGCCA	1 cut(s)	1181
MluCI	AATT	9 cut(s)	312, 343, 442, 552, 622, 870, 900, 933, 1001
MluNI	TGGCCA	1 cut(s)	1181
MlyI	GAGTC	3 cut(s)	255, 653, 763
MmeI	TCCRAC	3 cut(s)	72, 379, 1444
MnlI	CCTC	8 cut(s)	65, 728, 906, 1204, 1319, 1391, 1400, 1461
Mox20I	TGGCCA	1 cut(s)	1181
MroI	TCCGGA	1 cut(s)	1036
MroXI	GAANNNNTTC	1 cut(s)	1253
MscI	TGGCCA	1 cut(s)	1181
MseI	TTAA	4 cut(s)	285, 342, 689, 1083
MslI	CAYNNNNRTG	2 cut(s)	1167, 1195
Msp20I	TGGCCA	1 cut(s)	1181
MspI	CCGG	2 cut(s)	351, 1037
MspR9I	CCNGG	5 cut(s)	123, 225, 320, 846, 1584
MunI	CAATTG	3 cut(s)	552, 870, 900
MvaI	CCWGG	5 cut(s)	123, 225, 320, 846, 1584
MwoI	GCNNNNNNNGC	4 cut(s)	199, 503, 1178, 1187
NdeI	CATATG	1 cut(s)	1176
NdeII	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
NlaIII	CATG	2 cut(s)	269, 340
NlaIV	GGNNCC	9 cut(s)	192, 492, 685, 950, 951, 1017, 1018, 1363, 1569
NmuCI	GTSAC	6 cut(s)	82, 538, 1066, 1304, 1327, 1597
OliI	CACNNNNGTG	1 cut(s)	1195
PaeR7I	CTCGAG	1 cut(s)	16
PasI	CCCWGGG	1 cut(s)	319
PceI	AGGCCT	1 cut(s)	1471
PdmI	GAANNNNTTC	1 cut(s)	1253
PfeI	GAWTC	2 cut(s)	139, 1150
PflMI	CCANNNNNTGG	2 cut(s)	64, 271
PfoI	TCCNGGA	1 cut(s)	1582
PinAI	ACCGGT	1 cut(s)	350
PkrI	GCNGC	7 cut(s)	373, 376, 499, 585, 1128, 1450, 1572
PleI	GAGTC	3 cut(s)	254, 653, 762
PpsI	GAGTC	3 cut(s)	254, 653, 762
Ppu21I	YACGTR	2 cut(s)	1264, 1288
PpuMI	RGGWCCY	1 cut(s)	1016
Psp124BI	GAGCTC	1 cut(s)	23
Psp5II	RGGWCCY	1 cut(s)	1016
Psp6I	CCWGG	5 cut(s)	121, 223, 318, 844, 1582
PspEI	GGTNACC	1 cut(s)	1304
PspGI	CCWGG	5 cut(s)	121, 223, 318, 844, 1582
PspN4I	GGNNCC	9 cut(s)	192, 492, 685, 950, 951, 1017, 1018, 1363, 1569
PspOMI	GGGCCC	1 cut(s)	948
PspPI	GGNCC	6 cut(s)	683, 948, 949, 1016, 1205, 1568
PspPPI	RGGWCCY	1 cut(s)	1016
PspXI	VCTCGAGB	1 cut(s)	16
PstI	CTGCAG	3 cut(s)	208, 499, 915
PsuI	RGATCY	3 cut(s)	163, 490, 907
RsaI	GTAC	4 cut(s)	529, 780, 890, 1404
RsaNI	GTAC	4 cut(s)	528, 779, 889, 1403
RseI	CAYNNNNRTG	2 cut(s)	1167, 1195
SacI	GAGCTC	1 cut(s)	23
SaqAI	TTAA	4 cut(s)	285, 342, 689, 1083
SatI	GCNGC	7 cut(s)	372, 375, 498, 584, 1127, 1449, 1571
Sau3AI	GATC	8 cut(s)	163, 490, 742, 798, 907, 1039, 1239, 1435
Sau96I	GGNCC	6 cut(s)	683, 948, 949, 1016, 1205, 1568
SchI	GAGTC	3 cut(s)	255, 653, 763
ScrFI	CCNGG	5 cut(s)	123, 225, 320, 846, 1584
SduI	GDGCHC	6 cut(s)	23, 121, 952, 1077, 1192, 1287
SfaNI	GCATC	3 cut(s)	358, 1138, 1159
SfcI	CTRYAG	4 cut(s)	204, 256, 495, 911
Sfr274I	CTCGAG	1 cut(s)	16
SinI	GGWCC	2 cut(s)	1016, 1205
SlaI	CTCGAG	1 cut(s)	16
SmiMI	CAYNNNNRTG	2 cut(s)	1167, 1195
SmlI	CTYRAG	3 cut(s)	16, 746, 859
SmoI	CTYRAG	3 cut(s)	16, 746, 859
Sse9I	AATT	9 cut(s)	312, 343, 442, 552, 622, 870, 900, 933, 1001
SseBI	AGGCCT	1 cut(s)	1471
SsiI	CCGC	3 cut(s)	770, 1449, 1571
SspI	AATATT	1 cut(s)	1652
SspMI	CTAG	6 cut(s)	785, 884, 1088, 1133, 1194, 1532
SstI	GAGCTC	1 cut(s)	23
StuI	AGGCCT	1 cut(s)	1471
StyD4I	CCNGG	5 cut(s)	121, 223, 318, 844, 1582
StyI	CCWWGG	2 cut(s)	501, 1193
TaaI	ACNGT	6 cut(s)	715, 778, 1051, 1223, 1425, 1442
TaiI	ACGT	2 cut(s)	1266, 1290
TaqI	TCGA	2 cut(s)	17, 70
TasI	AATT	9 cut(s)	312, 343, 442, 552, 622, 870, 900, 933, 1001
TatI	WGTACW	2 cut(s)	778, 888
TauI	GCSGC	2 cut(s)	1451, 1573
TfiI	GAWTC	2 cut(s)	139, 1150
Tru1I	TTAA	4 cut(s)	285, 342, 689, 1083
Tru9I	TTAA	4 cut(s)	285, 342, 689, 1083
TscAI	CASTG	1 cut(s)	1276
TseFI	GTSAC	6 cut(s)	82, 538, 1066, 1304, 1327, 1597
TseI	GCWGC	5 cut(s)	371, 374, 497, 583, 1126
Tsp45I	GTSAC	6 cut(s)	82, 538, 1066, 1304, 1327, 1597
TspDTI	ATGAA	4 cut(s)	474, 502, 981, 1476
TspRI	CASTG	1 cut(s)	1276
Van91I	CCANNNNNTGG	2 cut(s)	64, 271
VneI	GTGCAC	1 cut(s)	1188
VpaK11BI	GGWCC	2 cut(s)	1016, 1205
XagI	CCTNNNNNAGG	1 cut(s)	1068
XapI	RAATTY	2 cut(s)	312, 442
XbaI	TCTAGA	1 cut(s)	883
XcmI	CCANNNNNNNNNTGG	1 cut(s)	677
XhoI	CTCGAG	1 cut(s)	16
XmaJI	CCTAGG	1 cut(s)	1193
XmiI	GTMKAC	1 cut(s)	1545
XmnI	GAANNNNTTC	1 cut(s)	1253
XspI	CTAG	6 cut(s)	785, 884, 1088, 1133, 1194, 1532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.