No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05570 AT4G39235 AT4G39235 |
| fragaria_vesca | FvH4_2g08920 FvH4_4g27401 |
| malus_domestica | MD05G1065400.v1.1 MD10G1075100.v1.1 |
| prunus_persica | Prupe.8G064900_v2.0.a1 Prupe.8G064900_v2.0.a1 Prupe.8G096200_v2.0.a1 Prupe.8G096200_v2.0.a1 Prupe.8G096200_v2.0.a1 Prupe.8G096200_v2.0.a1 |
| pyrus_communis | pycom05g05680 pycom10g05870 |
| rosa_chinensis | RchiOBHm_Chr4g0435221 RchiOBHm_Chr6g0264531 |
| rosa_laevigata | RLG00000014246 |
| rosa_multiflora | Rmu_sc0000578.1_g000012 Rmu_sc0005281.1_g000012 Rmu_ssc0000339.1_g000028 |
| rosa_roxburghii | Rroxscaffold_176G00431880 Rroxscaffold_5G00376430 |
| rosa_rugosa | Rorug04G0283200.1 Rorug06G0015700 |
| rosa_samantha | Rh4BG347000 Rh4CG361600 Rh4DG341400 Rh6AG133000 Rh6BG130600 Rh6CG128800 Rh6DG116000 |
| rosa_wichuraiana | Rw0G009750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 67 |
| Acc36I | ACCTGC | 1 cut(s) | 67 |
| AclWI | GGATC | 1 cut(s) | 144 |
| AcvI | CACGTG | 1 cut(s) | 178 |
| AflIII | ACRYGT | 2 cut(s) | 175, 177 |
| AgsI | TTSAA | 2 cut(s) | 26, 190 |
| AlwI | GGATC | 1 cut(s) | 144 |
| ApeKI | GCWGC | 5 cut(s) | 62, 65, 68, 71, 245 |
| AsuII | TTCGAA | 1 cut(s) | 283 |
| BbrPI | CACGTG | 1 cut(s) | 178 |
| BbsI | GAAGAC | 1 cut(s) | 200 |
| BbvI | GCAGC | 5 cut(s) | 49, 52, 55, 58, 232 |
| BceAI | ACGGC | 1 cut(s) | 63 |
| BfuAI | ACCTGC | 1 cut(s) | 67 |
| BisI | GCNGC | 5 cut(s) | 63, 66, 69, 72, 246 |
| BlsI | GCNGC | 5 cut(s) | 64, 67, 70, 73, 247 |
| BpiI | GAAGAC | 1 cut(s) | 200 |
| Bpu14I | TTCGAA | 1 cut(s) | 283 |
| BsaAI | YACGTR | 1 cut(s) | 178 |
| BsaJI | CCNNGG | 1 cut(s) | 255 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 37, 67 |
| BseDI | CCNNGG | 1 cut(s) | 255 |
| BseMII | CTCAG | 1 cut(s) | 225 |
| BseXI | GCAGC | 5 cut(s) | 49, 52, 55, 58, 232 |
| BsmI | GAATGC | 1 cut(s) | 247 |
| Bsp119I | TTCGAA | 1 cut(s) | 283 |
| Bsp143I | GATC | 1 cut(s) | 136 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspMI | ACCTGC | 1 cut(s) | 67 |
| BspPI | GGATC | 1 cut(s) | 144 |
| BspT104I | TTCGAA | 1 cut(s) | 283 |
| BssECI | CCNNGG | 1 cut(s) | 255 |
| BssMI | GATC | 1 cut(s) | 136 |
| BssT1I | CCWWGG | 1 cut(s) | 255 |
| Bst4CI | ACNGT | 1 cut(s) | 292 |
| Bst6I | CTCTTC | 2 cut(s) | 8, 279 |
| BstBAI | YACGTR | 1 cut(s) | 178 |
| BstBI | TTCGAA | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 1 cut(s) | 36 |
| BstDEI | CTNAG | 1 cut(s) | 234 |
| BstKTI | GATC | 1 cut(s) | 139 |
| BstMBI | GATC | 1 cut(s) | 136 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 71 |
| BstV1I | GCAGC | 5 cut(s) | 49, 52, 55, 58, 232 |
| BstV2I | GAAGAC | 1 cut(s) | 200 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 121 |
| BveI | ACCTGC | 1 cut(s) | 67 |
| Cac8I | GCNNGC | 1 cut(s) | 36 |
| CviAII | CATG | 1 cut(s) | 158 |
| CviJI | RGCY | 3 cut(s) | 34, 50, 113 |
| CviKI_1 | RGCY | 3 cut(s) | 34, 50, 113 |
| DdeI | CTNAG | 1 cut(s) | 234 |
| DpnI | GATC | 1 cut(s) | 138 |
| DpnII | GATC | 1 cut(s) | 136 |
| DraI | TTTAAA | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 2 cut(s) | 8, 279 |
| EarI | CTCTTC | 2 cut(s) | 8, 279 |
| Eco130I | CCWWGG | 1 cut(s) | 255 |
| Eco72I | CACGTG | 1 cut(s) | 178 |
| EcoT14I | CCWWGG | 1 cut(s) | 255 |
| ErhI | CCWWGG | 1 cut(s) | 255 |
| FaeI | CATG | 1 cut(s) | 161 |
| FaiI | YATR | 2 cut(s) | 159, 167 |
| FatI | CATG | 1 cut(s) | 157 |
| Fnu4HI | GCNGC | 5 cut(s) | 63, 66, 69, 72, 246 |
| Fsp4HI | GCNGC | 5 cut(s) | 63, 66, 69, 72, 246 |
| GluI | GCNGC | 5 cut(s) | 63, 66, 69, 72, 246 |
| Hin1II | CATG | 1 cut(s) | 161 |
| HinfI | GANTC | 1 cut(s) | 5 |
| Hpy188III | TCNNGA | 1 cut(s) | 190 |
| HpyAV | CCTTC | 2 cut(s) | 127, 290 |
| HpyCH4III | ACNGT | 1 cut(s) | 292 |
| HpyCH4IV | ACGT | 1 cut(s) | 177 |
| HpyCH4V | TGCA | 1 cut(s) | 74 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 71 |
| HpyF3I | CTNAG | 1 cut(s) | 234 |
| HpySE526I | ACGT | 1 cut(s) | 177 |
| Hsp92II | CATG | 1 cut(s) | 161 |
| Kzo9I | GATC | 1 cut(s) | 136 |
| LpnPI | CCDG | 3 cut(s) | 24, 48, 72 |
| Lsp1109I | GCAGC | 5 cut(s) | 49, 52, 55, 58, 232 |
| MaeII | ACGT | 1 cut(s) | 177 |
| MalI | GATC | 1 cut(s) | 138 |
| MboI | GATC | 1 cut(s) | 136 |
| MboII | GAAGA | 7 cut(s) | 25, 109, 112, 137, 205, 250, 266 |
| MseI | TTAA | 1 cut(s) | 213 |
| MslI | CAYNNNNRTG | 1 cut(s) | 144 |
| Mva1269I | GAATGC | 1 cut(s) | 247 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 71 |
| NdeII | GATC | 1 cut(s) | 136 |
| NlaIII | CATG | 1 cut(s) | 161 |
| NspV | TTCGAA | 1 cut(s) | 283 |
| PaqCI | CACCTGC | 1 cut(s) | 67 |
| PctI | GAATGC | 1 cut(s) | 247 |
| PfeI | GAWTC | 1 cut(s) | 5 |
| PkrI | GCNGC | 5 cut(s) | 64, 67, 70, 73, 247 |
| PmaCI | CACGTG | 1 cut(s) | 178 |
| PmlI | CACGTG | 1 cut(s) | 178 |
| Ppu21I | YACGTR | 1 cut(s) | 178 |
| PspCI | CACGTG | 1 cut(s) | 178 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 34, 66 |
| RseI | CAYNNNNRTG | 1 cut(s) | 144 |
| SaqAI | TTAA | 1 cut(s) | 213 |
| SatI | GCNGC | 5 cut(s) | 63, 66, 69, 72, 246 |
| Sau3AI | GATC | 1 cut(s) | 136 |
| SetI | ASST | 3 cut(s) | 61, 180, 228 |
| SfuI | TTCGAA | 1 cut(s) | 283 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 144 |
| StyI | CCWWGG | 1 cut(s) | 255 |
| TaaI | ACNGT | 1 cut(s) | 292 |
| TaiI | ACGT | 1 cut(s) | 180 |
| TaqI | TCGA | 1 cut(s) | 283 |
| TfiI | GAWTC | 1 cut(s) | 5 |
| Tru1I | TTAA | 1 cut(s) | 213 |
| Tru9I | TTAA | 1 cut(s) | 213 |
| TseI | GCWGC | 5 cut(s) | 62, 65, 68, 71, 245 |
| TspDTI | ATGAA | 1 cut(s) | 120 |