RH6AG259500

FtsJ-like methyltransferase

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0009475
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG259500.1

Sequence Viewer

Length: 951 bp
ATGGCATTTCAGGTTCTGAAATTTCCGAGTCACATCATCTCGCGCCGTTTTGGCAGAACTTCAGGCTTCTATTTCCTATCCGAATTCAACTCACATAAGCTCCCTGCAAGATGGGTTGGAGTGCCAATGCATGGTCCTTGTAGAAGCTTTGCTGCAGTGAAGTTATCAAAGGATCAAACACCAAAGAAGAAGAAGAGACTGGATGAAGTGTGCCTTGAAAGGTATGAACAATATAGCCGAACCTACGTACAGTCATGGATCTTACAAGGGAAAGTATTGGTGGATGGGAAGGTGGTCAATAAAGCCGGTACTCCAGTCTCTGATAAATCTGTTGTAAAGATTCTGGCTGAAGTCCCCAAATATGTATGTAGAGCAGGACACAAGTTAGAAGCTGCAATTGAACAGCTAGGTATTGATGTTTCTGGCAAAGTAGCTCTTGATTCAGGGTTGTCAACCGGTGGATTTACCGACTGTTTACTCCAGTATGGTGCATCATTTGTTTATGGAGTCGATGTAGGATATGGACAGGTAGCGGAAAAAATTCGAACTGATGAACGTGTGAGTGTGATAGAACGGACAAATTTAAGACACCTTCCTGGACTCCCGCAGAAAGTAGATTTGGTGACTTTGGATCTGTCATTCATCTCTATTCTATTGGTCATGCCCGCTGTAGTCAATGTGATGAAAGAAGAGGCAACATTAGTCACCCTGATTAAACCTCAGTTTGAAGCTCGCAGATCACAAGTAGGGAGTGGTGGCATTGTAAGAGATCCATTAGTTCATCAAGAAGTTCTTGAGAGGATCATCAAAGGTGTTGAGAATTTTGGATTTAGCAGCAAAGGATGGATAGAGTCTCCTCTCAAGGGTGCCGAGGGCAATATAGAATTTCTAGTTCACTTTACTCGAACAGCTGAGAAAAGTGTGGAGAACTTGGAATGTACTTCTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FtsJ S4

Protein Analysis

316

Amino Acids

35.03

Weight (kDa)

9.16

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S4 PF01479 66 - 110 1.7e-09 S4 domain
FtsJ PF01728 121 - 301 8.9e-39 FtsJ-like methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 866
AccB7I CCANNNNNTGG 1 cut(s) 131
AccII CGCG 1 cut(s) 43
AciI CCGC 3 cut(s) 533, 605, 666
AclWI GGATC 5 cut(s) 180, 266, 639, 764, 809
AcsI RAATTY 6 cut(s) 20, 83, 540, 580, 820, 884
AcuI CTGAAG 2 cut(s) 45, 369
AfaI GTAC 3 cut(s) 249, 310, 940
AfiI CCNNNNNNNGG 2 cut(s) 131, 863
AflIII ACRYGT 1 cut(s) 556
AgeI ACCGGT 1 cut(s) 455
AgsI TTSAA 4 cut(s) 88, 218, 401, 728
AjnI CCWGG 1 cut(s) 595
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
AluBI AGCT 7 cut(s) 100, 147, 392, 406, 434, 731, 911
AluI AGCT 7 cut(s) 100, 147, 392, 406, 434, 731, 911
Alw26I GTCTC 3 cut(s) 190, 322, 858
AlwI GGATC 5 cut(s) 180, 266, 639, 764, 809
AlwNI CAGNNNCTG 2 cut(s) 16, 320
ApeKI GCWGC 3 cut(s) 152, 392, 834
ApoI RAATTY 6 cut(s) 20, 83, 540, 580, 820, 884
AsiGI ACCGGT 1 cut(s) 455
Asp700I GAANNNNTTC 1 cut(s) 540
AspLEI GCGC 1 cut(s) 45
AspS9I GGNCC 1 cut(s) 134
AsuHPI GGTGA 2 cut(s) 634, 697
AsuII TTCGAA 1 cut(s) 544
AvaII GGWCC 1 cut(s) 134
BaeI ACNNNNGTAYC 2 cut(s) 300, 333
BanI GGYRCC 1 cut(s) 866
BbvI GCAGC 3 cut(s) 139, 379, 846
BccI CCATC 3 cut(s) 105, 278, 837
BceAI ACGGC 1 cut(s) 30
BciT130I CCWGG 1 cut(s) 597
BcoDI GTCTC 3 cut(s) 190, 322, 858
BfaI CTAG 2 cut(s) 407, 890
BfmI CTRYAG 2 cut(s) 153, 669
BglI GCCNNNNNGGC 1 cut(s) 51
BisI GCNGC 3 cut(s) 153, 393, 835
BlsI GCNGC 3 cut(s) 154, 394, 836
Bme1390I CCNGG 1 cut(s) 597
Bme18I GGWCC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 134
BmiI GGNNCC 1 cut(s) 868
BmrFI CCNGG 1 cut(s) 597
BmsI GCATC 1 cut(s) 500
BpmI CTGGAG 2 cut(s) 297, 464
Bpu14I TTCGAA 1 cut(s) 544
BpuEI CTTGAG 2 cut(s) 815, 845
BsaAI YACGTR 1 cut(s) 247
BsaJI CCNNGG 1 cut(s) 870
BsaWI WCCGGW 1 cut(s) 455
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 498, 528
Bsc4I CCNNNNNNNGG 2 cut(s) 131, 863
Bse118I RCCGGY 2 cut(s) 305, 455
Bse1I ACTGG 3 cut(s) 204, 314, 481
BseBI CCWGG 1 cut(s) 597
BseDI CCNNGG 1 cut(s) 870
BseGI GGATG 3 cut(s) 208, 289, 848
BseLI CCNNNNNNNGG 2 cut(s) 131, 863
BseMII CTCAG 2 cut(s) 734, 903
BseNI ACTGG 3 cut(s) 204, 314, 481
BseRI GAGGAG 1 cut(s) 846
BseXI GCAGC 3 cut(s) 139, 379, 846
Bsh1236I CGCG 1 cut(s) 43
BshNI GGYRCC 1 cut(s) 866
BshTI ACCGGT 1 cut(s) 455
BsiSI CCGG 2 cut(s) 306, 456
BslFI GGGAC 1 cut(s) 338
BslI CCNNNNNNNGG 2 cut(s) 131, 863
BsmAI GTCTC 3 cut(s) 190, 322, 858
BsmFI GGGAC 1 cut(s) 338
Bsp119I TTCGAA 1 cut(s) 544
Bsp143I GATC 6 cut(s) 172, 258, 631, 737, 769, 801
BspACI CCGC 3 cut(s) 533, 605, 666
BspCNI CTCAG 2 cut(s) 733, 904
BspFNI CGCG 1 cut(s) 43
BspLI GGNNCC 1 cut(s) 868
BspMAI CTGCAG 1 cut(s) 157
BspPI GGATC 5 cut(s) 180, 266, 639, 764, 809
BspT104I TTCGAA 1 cut(s) 544
BspT107I GGYRCC 1 cut(s) 866
BsrFI RCCGGY 2 cut(s) 305, 455
BsrI ACTGG 3 cut(s) 204, 314, 481
BssAI RCCGGY 2 cut(s) 305, 455
BssECI CCNNGG 1 cut(s) 870
BssMI GATC 6 cut(s) 172, 258, 631, 737, 769, 801
Bst2UI CCWGG 1 cut(s) 597
Bst4CI ACNGT 2 cut(s) 252, 473
Bst6I CTCTTC 2 cut(s) 188, 684
BstBAI YACGTR 1 cut(s) 247
BstBI TTCGAA 1 cut(s) 544
BstC8I GCNNGC 2 cut(s) 666, 733
BstDEI CTNAG 2 cut(s) 720, 912
BstF5I GGATG 3 cut(s) 208, 289, 848
BstFNI CGCG 1 cut(s) 43
BstHHI GCGC 1 cut(s) 45
BstKTI GATC 6 cut(s) 175, 261, 634, 740, 772, 804
BstMAI GTCTC 3 cut(s) 190, 322, 858
BstMBI GATC 6 cut(s) 172, 258, 631, 737, 769, 801
BstMWI GCNNNNNNNGC 1 cut(s) 51
BstNI CCWGG 1 cut(s) 597
BstSCI CCNGG 1 cut(s) 595
BstSFI CTRYAG 2 cut(s) 153, 669
BstSNI TACGTA 1 cut(s) 247
BstUI CGCG 1 cut(s) 43
BstV1I GCAGC 3 cut(s) 139, 379, 846
BstX2I RGATCY 3 cut(s) 258, 631, 769
BstYI RGATCY 3 cut(s) 258, 631, 769
BtsCI GGATG 3 cut(s) 208, 289, 848
BtsI GCAGTG 1 cut(s) 162
BtsIMutI CAGTG 1 cut(s) 162
Cac8I GCNNGC 2 cut(s) 666, 733
CaiI CAGNNNCTG 2 cut(s) 16, 320
CfoI GCGC 1 cut(s) 45
Cfr10I RCCGGY 2 cut(s) 305, 455
Cfr13I GGNCC 1 cut(s) 134
Csp6I GTAC 3 cut(s) 248, 309, 939
CspAI ACCGGT 1 cut(s) 455
CviAII CATG 3 cut(s) 131, 255, 661
CviQI GTAC 3 cut(s) 248, 309, 939
DdeI CTNAG 2 cut(s) 720, 912
DpnI GATC 6 cut(s) 174, 260, 633, 739, 771, 803
DpnII GATC 6 cut(s) 172, 258, 631, 737, 769, 801
Eam1104I CTCTTC 2 cut(s) 188, 684
EarI CTCTTC 2 cut(s) 188, 684
Eco105I TACGTA 1 cut(s) 247
Eco47I GGWCC 1 cut(s) 134
Eco57I CTGAAG 2 cut(s) 45, 369
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 1 cut(s) 595
EcoT22I ATGCAT 1 cut(s) 132
FaeI CATG 3 cut(s) 134, 258, 664
FalI AAGNNNNNCTT 6 cut(s) 198, 230, 420, 452, 777, 809
FaqI GGGAC 1 cut(s) 338
FatI CATG 3 cut(s) 130, 254, 660
FauI CCCGC 2 cut(s) 612, 673
Fnu4HI GCNGC 3 cut(s) 153, 393, 835
FokI GGATG 3 cut(s) 215, 296, 855
Fsp4HI GCNGC 3 cut(s) 153, 393, 835
FspBI CTAG 2 cut(s) 407, 890
GlaI GCGC 1 cut(s) 44
GluI GCNGC 3 cut(s) 153, 393, 835
GsuI CTGGAG 2 cut(s) 297, 464
HapII CCGG 2 cut(s) 306, 456
HhaI GCGC 1 cut(s) 45
Hin1II CATG 3 cut(s) 134, 258, 664
Hin6I GCGC 1 cut(s) 43
HinP1I GCGC 1 cut(s) 43
HincII GTYRAC 1 cut(s) 453
HindII GTYRAC 1 cut(s) 453
HindIII AAGCTT 1 cut(s) 145
HinfI GANTC 6 cut(s) 28, 340, 440, 507, 600, 851
HpaII CCGG 2 cut(s) 306, 456
HphI GGTGA 2 cut(s) 634, 697
Hpy166II GTNNAC 3 cut(s) 453, 476, 895
Hpy188I TCNGA 4 cut(s) 18, 27, 82, 322
Hpy188III TCNNGA 3 cut(s) 437, 785, 794
Hpy8I GTNNAC 3 cut(s) 453, 476, 895
HpyAV CCTTC 2 cut(s) 283, 602
HpyCH4III ACNGT 2 cut(s) 252, 473
HpyCH4IV ACGT 2 cut(s) 246, 556
HpyCH4V TGCA 6 cut(s) 107, 130, 155, 395, 491, 947
HpyF10VI GCNNNNNNNGC 1 cut(s) 51
HpyF3I CTNAG 2 cut(s) 720, 912
HpySE526I ACGT 2 cut(s) 246, 556
Hsp92II CATG 3 cut(s) 134, 258, 664
HspAI GCGC 1 cut(s) 43
Kzo9I GATC 6 cut(s) 172, 258, 631, 737, 769, 801
LmnI GCTCC 1 cut(s) 105
Lsp1109I GCAGC 3 cut(s) 139, 379, 846
LweI GCATC 1 cut(s) 500
MaeI CTAG 2 cut(s) 407, 890
MaeII ACGT 2 cut(s) 246, 556
MaeIII GTNAC 3 cut(s) 29, 622, 703
MalI GATC 6 cut(s) 174, 260, 633, 739, 771, 803
MboI GATC 6 cut(s) 172, 258, 631, 737, 769, 801
MboII GAAGA 4 cut(s) 199, 202, 205, 701
MfeI CAATTG 1 cut(s) 396
MflI RGATCY 3 cut(s) 258, 631, 769
MluCI AATT 7 cut(s) 20, 83, 396, 540, 580, 820, 884
MlyI GAGTC 4 cut(s) 37, 516, 594, 860
MmeI TCCRAC 1 cut(s) 97
MnlI CCTC 5 cut(s) 685, 729, 792, 865, 867
Mph1103I ATGCAT 1 cut(s) 132
MroXI GAANNNNTTC 1 cut(s) 540
MseI TTAA 2 cut(s) 584, 714
MspA1I CMGCKG 2 cut(s) 668, 911
MspI CCGG 2 cut(s) 306, 456
MspR9I CCNGG 1 cut(s) 597
MunI CAATTG 1 cut(s) 396
MvaI CCWGG 1 cut(s) 597
MvnI CGCG 1 cut(s) 43
MwoI GCNNNNNNNGC 1 cut(s) 51
NdeII GATC 6 cut(s) 172, 258, 631, 737, 769, 801
NlaIII CATG 3 cut(s) 134, 258, 664
NlaIV GGNNCC 1 cut(s) 868
NmeAIII GCCGAG 1 cut(s) 895
NmuCI GTSAC 3 cut(s) 29, 622, 703
NsiI ATGCAT 1 cut(s) 132
NspV TTCGAA 1 cut(s) 544
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 2 cut(s) 340, 440
PflMI CCANNNNNTGG 1 cut(s) 131
PfoI TCCNGGA 1 cut(s) 595
PinAI ACCGGT 1 cut(s) 455
PkrI GCNGC 3 cut(s) 154, 394, 836
PleI GAGTC 4 cut(s) 36, 515, 594, 859
PpsI GAGTC 4 cut(s) 36, 515, 594, 859
Ppu21I YACGTR 1 cut(s) 247
Psp6I CCWGG 1 cut(s) 595
PspGI CCWGG 1 cut(s) 595
PspN4I GGNNCC 1 cut(s) 868
PspPI GGNCC 1 cut(s) 134
PstI CTGCAG 1 cut(s) 157
PstNI CAGNNNCTG 2 cut(s) 16, 320
PsuI RGATCY 3 cut(s) 258, 631, 769
PvuII CAGCTG 1 cut(s) 911
RsaI GTAC 3 cut(s) 249, 310, 940
RsaNI GTAC 3 cut(s) 248, 309, 939
SaqAI TTAA 2 cut(s) 584, 714
SatI GCNGC 3 cut(s) 153, 393, 835
Sau3AI GATC 6 cut(s) 172, 258, 631, 737, 769, 801
Sau96I GGNCC 1 cut(s) 134
SchI GAGTC 4 cut(s) 37, 516, 594, 860
ScrFI CCNGG 1 cut(s) 597
SfaNI GCATC 1 cut(s) 500
SfcI CTRYAG 2 cut(s) 153, 669
SfuI TTCGAA 1 cut(s) 544
SinI GGWCC 1 cut(s) 134
SmlI CTYRAG 2 cut(s) 794, 860
SmoI CTYRAG 2 cut(s) 794, 860
SnaBI TACGTA 1 cut(s) 247
Sse9I AATT 7 cut(s) 20, 83, 396, 540, 580, 820, 884
SsiI CCGC 3 cut(s) 533, 605, 666
SspMI CTAG 2 cut(s) 407, 890
StyD4I CCNGG 1 cut(s) 595
TaaI ACNGT 2 cut(s) 252, 473
TaiI ACGT 2 cut(s) 249, 559
TaqI TCGA 3 cut(s) 510, 544, 904
TasI AATT 7 cut(s) 20, 83, 396, 540, 580, 820, 884
TatI WGTACW 1 cut(s) 938
TfiI GAWTC 2 cut(s) 340, 440
Tru1I TTAA 2 cut(s) 584, 714
Tru9I TTAA 2 cut(s) 584, 714
TscAI CASTG 1 cut(s) 162
TseFI GTSAC 3 cut(s) 29, 622, 703
TseI GCWGC 3 cut(s) 152, 392, 834
Tsp45I GTSAC 3 cut(s) 29, 622, 703
TspDTI ATGAA 6 cut(s) 219, 240, 567, 631, 698, 770
TspGWI ACGGA 1 cut(s) 589
TspRI CASTG 1 cut(s) 162
Van91I CCANNNNNTGG 1 cut(s) 131
VpaK11BI GGWCC 1 cut(s) 134
XapI RAATTY 6 cut(s) 20, 83, 540, 580, 820, 884
XmnI GAANNNNTTC 1 cut(s) 540
XspI CTAG 2 cut(s) 407, 890
Zsp2I ATGCAT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.