Rh6CG443800

Protein GLUTAMINE DUMPER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0014675
Physical Location & Seq
Reverse (-)
62215341 .. 62215896
556 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG443800.1

Sequence Viewer

Length: 378 bp
ATGCACGACGATGATAACTGTAACAACTGGCGGTGCTCGGCGTGGAACAATCCGGTGCTTTATTTGGCGGCGGCGTTTGCGGCCGTGTTCCTTTTCCTGCGGCTAGGGCTCTCCATCTGGATTTTTTACGAGAAGCGGAGGCAGATAATGGCTCAACAACACGATCACAGATTATCATCAGCTTCACAAGACTTGGAGAGTAATGGGACGGTTACTAGTAATAGTACTGATCGTGTTCATCAGAGAGAATGGGAATTGGAGAGTGTTAATGGTGGTGGTGAGGCCAGCGATTGCAAGGAAGGGAAAGTTTCCGACGATAAGGTTTTGGTGATAATGGCCGGAGATGACAAACCTACCTTCTTGGCCACGCCAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

125

Amino Acids

14.09

Weight (kDa)

5.05

Isoelectric Point (pI)

31.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 6 cut(s) 31, 68, 71, 80, 100, 136
AcoI YGGCCR 3 cut(s) 81, 336, 363
AfaI GTAC 1 cut(s) 226
AhlI ACTAGT 1 cut(s) 215
AluBI AGCT 1 cut(s) 182
AluI AGCT 1 cut(s) 182
Alw21I GWGCWC 1 cut(s) 38
AoxI GGCC 4 cut(s) 81, 282, 336, 363
AsuHPI GGTGA 2 cut(s) 290, 340
BalI TGGCCA 1 cut(s) 365
BanII GRGCYC 1 cut(s) 111
Bbv12I GWGCWC 1 cut(s) 38
BccI CCATC 1 cut(s) 122
BceAI ACGGC 1 cut(s) 68
BcuI ACTAGT 1 cut(s) 215
BfaI CTAG 2 cut(s) 104, 216
BisI GCNGC 4 cut(s) 69, 72, 81, 101
BlsI GCNGC 4 cut(s) 70, 73, 82, 102
BmcAI AGTACT 1 cut(s) 226
BsaBI GATNNNNATC 1 cut(s) 175
BsaWI WCCGGW 1 cut(s) 52
Bse1I ACTGG 1 cut(s) 32
Bse8I GATNNNNATC 1 cut(s) 175
BseJI GATNNNNATC 1 cut(s) 175
BseNI ACTGG 1 cut(s) 32
BseX3I CGGCCG 1 cut(s) 81
Bsh1285I CGRYCG 1 cut(s) 84
BshFI GGCC 4 cut(s) 83, 284, 338, 365
BsiEI CGRYCG 1 cut(s) 84
BsiHKAI GWGCWC 1 cut(s) 38
BsiSI CCGG 2 cut(s) 53, 339
BslFI GGGAC 1 cut(s) 220
BsmFI GGGAC 1 cut(s) 220
BsnI GGCC 4 cut(s) 83, 284, 338, 365
Bsp1286I GDGCHC 2 cut(s) 38, 111
Bsp143I GATC 2 cut(s) 163, 229
BspACI CCGC 6 cut(s) 31, 68, 71, 80, 100, 136
BspANI GGCC 4 cut(s) 83, 284, 338, 365
BsrI ACTGG 1 cut(s) 32
BssMI GATC 2 cut(s) 163, 229
Bst4CI ACNGT 2 cut(s) 20, 211
BstC8I GCNNGC 1 cut(s) 286
BstKTI GATC 2 cut(s) 166, 232
BstMBI GATC 2 cut(s) 163, 229
BstMCI CGRYCG 1 cut(s) 84
BstMWI GCNNNNNNNGC 3 cut(s) 77, 80, 106
BstZI CGGCCG 1 cut(s) 81
BsuRI GGCC 4 cut(s) 83, 284, 338, 365
Cac8I GCNNGC 1 cut(s) 286
Csp6I GTAC 1 cut(s) 225
CviJI RGCY 8 cut(s) 83, 103, 109, 152, 182, 284, 338, 365
CviKI_1 RGCY 8 cut(s) 83, 103, 109, 152, 182, 284, 338, 365
CviQI GTAC 1 cut(s) 225
DpnI GATC 2 cut(s) 165, 231
DpnII GATC 2 cut(s) 163, 229
EaeI YGGCCR 3 cut(s) 81, 336, 363
EagI CGGCCG 1 cut(s) 81
EclXI CGGCCG 1 cut(s) 81
Eco24I GRGCYC 1 cut(s) 111
Eco52I CGGCCG 1 cut(s) 81
EcoT38I GRGCYC 1 cut(s) 111
FaqI GGGAC 1 cut(s) 220
Fnu4HI GCNGC 4 cut(s) 69, 72, 81, 101
FriOI GRGCYC 1 cut(s) 111
Fsp4HI GCNGC 4 cut(s) 69, 72, 81, 101
FspBI CTAG 2 cut(s) 104, 216
GluI GCNGC 4 cut(s) 69, 72, 81, 101
HaeIII GGCC 4 cut(s) 83, 284, 338, 365
HapII CCGG 2 cut(s) 53, 339
HpaII CCGG 2 cut(s) 53, 339
HphI GGTGA 2 cut(s) 290, 340
Hpy188I TCNGA 2 cut(s) 243, 313
Hpy188III TCNNGA 1 cut(s) 118
Hpy99I CGWCG 2 cut(s) 11, 317
HpyAV CCTTC 2 cut(s) 293, 367
HpyCH4III ACNGT 2 cut(s) 20, 211
HpyCH4V TGCA 2 cut(s) 4, 294
HpyF10VI GCNNNNNNNGC 3 cut(s) 77, 80, 106
Kzo9I GATC 2 cut(s) 163, 229
LpnPI CCDG 6 cut(s) 13, 66, 103, 110, 298, 352
MaeI CTAG 2 cut(s) 104, 216
MaeIII GTNAC 2 cut(s) 20, 211
MalI GATC 2 cut(s) 165, 231
MboI GATC 2 cut(s) 163, 229
MhlI GDGCHC 2 cut(s) 38, 111
MlsI TGGCCA 1 cut(s) 365
MluCI AATT 1 cut(s) 254
MluNI TGGCCA 1 cut(s) 365
MmeI TCCRAC 1 cut(s) 336
MnlI CCTC 2 cut(s) 132, 274
Mox20I TGGCCA 1 cut(s) 365
MscI TGGCCA 1 cut(s) 365
MseI TTAA 1 cut(s) 267
MslI CAYNNNNRTG 2 cut(s) 9, 371
Msp20I TGGCCA 1 cut(s) 365
MspI CCGG 2 cut(s) 53, 339
MwoI GCNNNNNNNGC 3 cut(s) 77, 80, 106
NdeII GATC 2 cut(s) 163, 229
NmeAIII GCCGAG 1 cut(s) 17
PkrI GCNGC 4 cut(s) 70, 73, 82, 102
RsaI GTAC 1 cut(s) 226
RsaNI GTAC 1 cut(s) 225
RseI CAYNNNNRTG 2 cut(s) 9, 371
SaqAI TTAA 1 cut(s) 267
SatI GCNGC 4 cut(s) 69, 72, 81, 101
Sau3AI GATC 2 cut(s) 163, 229
ScaI AGTACT 1 cut(s) 226
SduI GDGCHC 2 cut(s) 38, 111
SetI ASST 4 cut(s) 184, 324, 355, 359
SmiMI CAYNNNNRTG 2 cut(s) 9, 371
SpeI ACTAGT 1 cut(s) 215
Sse9I AATT 1 cut(s) 254
SsiI CCGC 6 cut(s) 31, 68, 71, 80, 100, 136
SspMI CTAG 2 cut(s) 104, 216
TaaI ACNGT 2 cut(s) 20, 211
TasI AATT 1 cut(s) 254
TatI WGTACW 1 cut(s) 224
TauI GCSGC 4 cut(s) 71, 74, 83, 103
Tru1I TTAA 1 cut(s) 267
Tru9I TTAA 1 cut(s) 267
TspDTI ATGAA 1 cut(s) 227
XspI CTAG 2 cut(s) 104, 216
ZrmI AGTACT 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.