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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g09801 FvH4_2g09801 FvH4_2g09802 FvH4_2g10140 FvH4_2g10140 FvH4_2g10140 |
| rosa_chinensis | RchiOBHm_Chr6g0266141 RchiOBHm_Chr6g0266151 |
| rosa_laevigata | RLG00000014112 RLG00000014113 |
| rosa_multiflora | Rmu_sc0004324.1_g000010 Rmu_sc0012594.1_g000003 |
| rosa_roxburghii | Rroxscaffold_174G00435240 Rroxscaffold_174G00435320 Rroxscaffold_2G00113790 Rroxscaffold_7G00201870 Rroxscaffold_7G00201900 |
| rosa_rugosa | Rorug06G0024300 |
| rosa_samantha | Rh6AG144900 Rh6AG145000 Rh6BG145600 Rh6BG145700 Rh6CG142000 Rh6CG142100 Rh6DG130000 Rh6DG130100 |
| rosa_wichuraiana | Rw6G012510 Rw6G012520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 218 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 773 |
| AccIII | TCCGGA | 1 cut(s) | 826 |
| AciI | CCGC | 2 cut(s) | 142, 717 |
| AclWI | GGATC | 7 cut(s) | 1250, 1263, 1316, 1352, 1365, 1538, 1967 |
| AcoI | YGGCCR | 2 cut(s) | 191, 1195 |
| AcsI | RAATTY | 4 cut(s) | 105, 698, 1129, 1175 |
| AcvI | CACGTG | 1 cut(s) | 1589 |
| AfaI | GTAC | 3 cut(s) | 537, 1281, 1338 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 371, 773, 1220 |
| AflIII | ACRYGT | 1 cut(s) | 1586 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 172, 204, 1541, 1573 |
| AluBI | AGCT | 6 cut(s) | 556, 832, 874, 967, 1126, 1446 |
| AluI | AGCT | 6 cut(s) | 556, 832, 874, 967, 1126, 1446 |
| Alw21I | GWGCWC | 2 cut(s) | 939, 1448 |
| Alw26I | GTCTC | 4 cut(s) | 23, 284, 568, 1215 |
| AlwI | GGATC | 7 cut(s) | 1250, 1263, 1316, 1352, 1365, 1538, 1967 |
| Ama87I | CYCGRG | 1 cut(s) | 397 |
| Aor13HI | TCCGGA | 1 cut(s) | 826 |
| AoxI | GGCC | 2 cut(s) | 191, 1195 |
| ApeKI | GCWGC | 3 cut(s) | 121, 475, 1246 |
| ApoI | RAATTY | 4 cut(s) | 105, 698, 1129, 1175 |
| AseI | ATTAAT | 1 cut(s) | 1493 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 207, 381, 1526 |
| AsuC2I | CCSGG | 2 cut(s) | 398, 399 |
| AsuHPI | GGTGA | 4 cut(s) | 386, 929, 1531, 2014 |
| AsuII | TTCGAA | 1 cut(s) | 1240 |
| AsuNHI | GCTAGC | 1 cut(s) | 1628 |
| AvaI | CYCGRG | 1 cut(s) | 397 |
| BalI | TGGCCA | 2 cut(s) | 193, 1197 |
| BamHI | GGATCC | 2 cut(s) | 1255, 1357 |
| BanI | GGYRCC | 1 cut(s) | 218 |
| BanII | GRGCYC | 3 cut(s) | 404, 1430, 1448 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 519, 551 |
| BauI | CACGAG | 2 cut(s) | 938, 1791 |
| BbrPI | CACGTG | 1 cut(s) | 1589 |
| BbsI | GAAGAC | 2 cut(s) | 345, 624 |
| Bbv12I | GWGCWC | 2 cut(s) | 939, 1448 |
| BbvI | GCAGC | 3 cut(s) | 108, 462, 1258 |
| BccI | CCATC | 3 cut(s) | 887, 1091, 1993 |
| BceAI | ACGGC | 1 cut(s) | 365 |
| BclI | TGATCA | 1 cut(s) | 1120 |
| BcnI | CCSGG | 2 cut(s) | 398, 399 |
| BcoDI | GTCTC | 4 cut(s) | 23, 284, 568, 1215 |
| BfaI | CTAG | 3 cut(s) | 1068, 1449, 1629 |
| BfmI | CTRYAG | 3 cut(s) | 1227, 1332, 1620 |
| BisI | GCNGC | 3 cut(s) | 122, 476, 1247 |
| BlpI | GCTNAGC | 1 cut(s) | 1992 |
| BlsI | GCNGC | 3 cut(s) | 123, 477, 1248 |
| Bme1390I | CCNGG | 2 cut(s) | 398, 399 |
| BmeT110I | CYCGRG | 1 cut(s) | 397 |
| BmiI | GGNNCC | 4 cut(s) | 220, 821, 1257, 1359 |
| BmrFI | CCNGG | 2 cut(s) | 398, 399 |
| BmrI | ACTGGG | 1 cut(s) | 1865 |
| BmsI | GCATC | 5 cut(s) | 256, 704, 1633, 1729, 2025 |
| BmtI | GCTAGC | 1 cut(s) | 1632 |
| BmuI | ACTGGG | 1 cut(s) | 1865 |
| BpiI | GAAGAC | 2 cut(s) | 345, 624 |
| BpmI | CTGGAG | 1 cut(s) | 1582 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1992 |
| Bpu14I | TTCGAA | 1 cut(s) | 1240 |
| BpuEI | CTTGAG | 1 cut(s) | 4 |
| BpuMI | CCSGG | 2 cut(s) | 398, 399 |
| BsaAI | YACGTR | 1 cut(s) | 1589 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1506 |
| BsaI | GGTCTC | 2 cut(s) | 23, 1215 |
| BsaJI | CCNNGG | 4 cut(s) | 396, 397, 1166, 1548 |
| BsaWI | WCCGGW | 1 cut(s) | 826 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 371, 773, 1220 |
| Bse1I | ACTGG | 1 cut(s) | 1871 |
| Bse3DI | GCAATG | 1 cut(s) | 220 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1506 |
| BseAI | TCCGGA | 1 cut(s) | 826 |
| BseDI | CCNNGG | 4 cut(s) | 396, 397, 1166, 1548 |
| BseGI | GGATG | 7 cut(s) | 270, 719, 1102, 1177, 1446, 1504, 1866 |
| BseJI | GATNNNNATC | 1 cut(s) | 1506 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 371, 773, 1220 |
| BseMI | GCAATG | 1 cut(s) | 220 |
| BseMII | CTCAG | 1 cut(s) | 362 |
| BseNI | ACTGG | 1 cut(s) | 1871 |
| BseRI | GAGGAG | 4 cut(s) | 465, 1436, 1852, 1889 |
| BseXI | GCAGC | 3 cut(s) | 108, 462, 1258 |
| BsgI | GTGCAG | 1 cut(s) | 461 |
| BshFI | GGCC | 2 cut(s) | 193, 1197 |
| BshNI | GGYRCC | 1 cut(s) | 218 |
| BsiHKAI | GWGCWC | 2 cut(s) | 939, 1448 |
| BsiHKCI | CYCGRG | 1 cut(s) | 397 |
| BsiSI | CCGG | 2 cut(s) | 398, 827 |
| BslFI | GGGAC | 1 cut(s) | 807 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 371, 773, 1220 |
| BsmAI | GTCTC | 4 cut(s) | 23, 284, 568, 1215 |
| BsmFI | GGGAC | 1 cut(s) | 807 |
| BsmI | GAATGC | 2 cut(s) | 1526, 1579 |
| BsnI | GGCC | 2 cut(s) | 193, 1197 |
| Bso31I | GGTCTC | 2 cut(s) | 23, 1215 |
| BsoBI | CYCGRG | 1 cut(s) | 397 |
| Bsp119I | TTCGAA | 1 cut(s) | 1240 |
| Bsp1286I | GDGCHC | 4 cut(s) | 404, 939, 1430, 1448 |
| Bsp13I | TCCGGA | 1 cut(s) | 826 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1992 |
| BspACI | CCGC | 2 cut(s) | 142, 717 |
| BspANI | GGCC | 2 cut(s) | 193, 1197 |
| BspCNI | CTCAG | 1 cut(s) | 361 |
| BspEI | TCCGGA | 1 cut(s) | 826 |
| BspLI | GGNNCC | 4 cut(s) | 220, 821, 1257, 1359 |
| BspMAI | CTGCAG | 3 cut(s) | 1231, 1336, 1624 |
| BspOI | GCTAGC | 1 cut(s) | 1632 |
| BspPI | GGATC | 7 cut(s) | 1250, 1263, 1316, 1352, 1365, 1538, 1967 |
| BspT104I | TTCGAA | 1 cut(s) | 1240 |
| BspT107I | GGYRCC | 1 cut(s) | 218 |
| BspTNI | GGTCTC | 2 cut(s) | 23, 1215 |
| BsrDI | GCAATG | 1 cut(s) | 220 |
| BsrI | ACTGG | 1 cut(s) | 1871 |
| BssECI | CCNNGG | 4 cut(s) | 396, 397, 1166, 1548 |
| BssSI | CACGAG | 2 cut(s) | 938, 1791 |
| BssT1I | CCWWGG | 2 cut(s) | 1166, 1548 |
| Bst2BI | CACGAG | 2 cut(s) | 938, 1791 |
| Bst4CI | ACNGT | 2 cut(s) | 482, 1237 |
| Bst6I | CTCTTC | 4 cut(s) | 985, 991, 1413, 1946 |
| BstBAI | YACGTR | 1 cut(s) | 1589 |
| BstBI | TTCGAA | 1 cut(s) | 1240 |
| BstC8I | GCNNGC | 2 cut(s) | 719, 1630 |
| BstDEI | CTNAG | 3 cut(s) | 348, 622, 1992 |
| BstF5I | GGATG | 7 cut(s) | 270, 719, 1102, 1177, 1446, 1504, 1866 |
| BstMAI | GTCTC | 4 cut(s) | 23, 284, 568, 1215 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 84 |
| BstNSI | RCATGY | 2 cut(s) | 8, 1313 |
| BstSCI | CCNGG | 2 cut(s) | 396, 397 |
| BstSFI | CTRYAG | 3 cut(s) | 1227, 1332, 1620 |
| BstV1I | GCAGC | 3 cut(s) | 108, 462, 1258 |
| BstV2I | GAAGAC | 2 cut(s) | 345, 624 |
| BstX2I | RGATCY | 3 cut(s) | 1255, 1357, 1543 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1437 |
| BstYI | RGATCY | 3 cut(s) | 1255, 1357, 1543 |
| BsuRI | GGCC | 2 cut(s) | 193, 1197 |
| BtsCI | GGATG | 7 cut(s) | 270, 719, 1102, 1177, 1446, 1504, 1866 |
| BtsI | GCAGTG | 3 cut(s) | 663, 1146, 1617 |
| BtsIMutI | CAGTG | 5 cut(s) | 487, 663, 778, 1146, 1617 |
| Cac8I | GCNNGC | 2 cut(s) | 719, 1630 |
| Cfr9I | CCCGGG | 1 cut(s) | 397 |
| Csp6I | GTAC | 3 cut(s) | 536, 1280, 1337 |
| CviAII | CATG | 9 cut(s) | 5, 371, 405, 550, 645, 1084, 1199, 1310, 1977 |
| CviQI | GTAC | 3 cut(s) | 536, 1280, 1337 |
| DdeI | CTNAG | 3 cut(s) | 348, 622, 1992 |
| EaeI | YGGCCR | 2 cut(s) | 191, 1195 |
| Eam1104I | CTCTTC | 4 cut(s) | 985, 991, 1413, 1946 |
| EarI | CTCTTC | 4 cut(s) | 985, 991, 1413, 1946 |
| Ecl136II | GAGCTC | 1 cut(s) | 1446 |
| Eco130I | CCWWGG | 2 cut(s) | 1166, 1548 |
| Eco24I | GRGCYC | 3 cut(s) | 404, 1430, 1448 |
| Eco31I | GGTCTC | 2 cut(s) | 23, 1215 |
| Eco53kI | GAGCTC | 1 cut(s) | 1446 |
| Eco72I | CACGTG | 1 cut(s) | 1589 |
| Eco88I | CYCGRG | 1 cut(s) | 397 |
| EcoICRI | GAGCTC | 1 cut(s) | 1446 |
| EcoT14I | CCWWGG | 2 cut(s) | 1166, 1548 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 1648 |
| EcoT38I | GRGCYC | 3 cut(s) | 404, 1430, 1448 |
| ErhI | CCWWGG | 2 cut(s) | 1166, 1548 |
| FaeI | CATG | 9 cut(s) | 8, 374, 408, 553, 648, 1087, 1202, 1313, 1980 |
| FaqI | GGGAC | 1 cut(s) | 807 |
| FatI | CATG | 9 cut(s) | 4, 370, 404, 549, 644, 1083, 1198, 1309, 1976 |
| FauI | CCCGC | 1 cut(s) | 710 |
| FbaI | TGATCA | 1 cut(s) | 1120 |
| Fnu4HI | GCNGC | 3 cut(s) | 122, 476, 1247 |
| FokI | GGATG | 7 cut(s) | 257, 726, 1109, 1184, 1453, 1511, 1853 |
| FriOI | GRGCYC | 3 cut(s) | 404, 1430, 1448 |
| Fsp4HI | GCNGC | 3 cut(s) | 122, 476, 1247 |
| FspBI | CTAG | 3 cut(s) | 1068, 1449, 1629 |
| GluI | GCNGC | 3 cut(s) | 122, 476, 1247 |
| GsuI | CTGGAG | 1 cut(s) | 1582 |
| HaeIII | GGCC | 2 cut(s) | 193, 1197 |
| HapII | CCGG | 2 cut(s) | 398, 827 |
| Hin1II | CATG | 9 cut(s) | 8, 374, 408, 553, 648, 1087, 1202, 1313, 1980 |
| HindIII | AAGCTT | 1 cut(s) | 872 |
| HinfI | GANTC | 4 cut(s) | 230, 352, 1162, 1810 |
| HpaII | CCGG | 2 cut(s) | 398, 827 |
| HphI | GGTGA | 4 cut(s) | 386, 929, 1531, 2014 |
| Hpy188I | TCNGA | 6 cut(s) | 177, 229, 351, 1321, 1414, 1960 |
| HpyAV | CCTTC | 6 cut(s) | 450, 833, 938, 967, 1152, 1350 |
| HpyCH4III | ACNGT | 2 cut(s) | 482, 1237 |
| HpyCH4IV | ACGT | 2 cut(s) | 538, 1588 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 84 |
| HpyF3I | CTNAG | 3 cut(s) | 348, 622, 1992 |
| HpySE526I | ACGT | 2 cut(s) | 538, 1588 |
| Hsp92II | CATG | 9 cut(s) | 8, 374, 408, 553, 648, 1087, 1202, 1313, 1980 |
| Kpn2I | TCCGGA | 1 cut(s) | 826 |
| Ksp22I | TGATCA | 1 cut(s) | 1120 |
| LmnI | GCTCC | 5 cut(s) | 244, 553, 819, 829, 886 |
| Lsp1109I | GCAGC | 3 cut(s) | 108, 462, 1258 |
| LweI | GCATC | 5 cut(s) | 256, 704, 1633, 1729, 2025 |
| MaeI | CTAG | 3 cut(s) | 1068, 1449, 1629 |
| MaeII | ACGT | 2 cut(s) | 538, 1588 |
| MaeIII | GTNAC | 5 cut(s) | 322, 1231, 1582, 1605, 1853 |
| MfeI | CAATTG | 2 cut(s) | 1157, 1250 |
| MflI | RGATCY | 3 cut(s) | 1255, 1357, 1543 |
| MhlI | GDGCHC | 4 cut(s) | 404, 939, 1430, 1448 |
| MlsI | TGGCCA | 2 cut(s) | 193, 1197 |
| MluNI | TGGCCA | 2 cut(s) | 193, 1197 |
| MlyI | GAGTC | 1 cut(s) | 1171 |
| MmeI | TCCRAC | 3 cut(s) | 111, 1072, 1349 |
| Mox20I | TGGCCA | 2 cut(s) | 193, 1197 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 1648 |
| MroI | TCCGGA | 1 cut(s) | 826 |
| MroXI | GAANNNNTTC | 3 cut(s) | 207, 381, 1526 |
| MscI | TGGCCA | 2 cut(s) | 193, 1197 |
| MseI | TTAA | 9 cut(s) | 150, 282, 491, 870, 900, 1004, 1113, 1493, 1907 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1056, 2021 |
| Msp20I | TGGCCA | 2 cut(s) | 193, 1197 |
| MspI | CCGG | 2 cut(s) | 398, 827 |
| MspR9I | CCNGG | 2 cut(s) | 398, 399 |
| MunI | CAATTG | 2 cut(s) | 1157, 1250 |
| Mva1269I | GAATGC | 2 cut(s) | 1526, 1579 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 84 |
| NciI | CCSGG | 2 cut(s) | 398, 399 |
| NheI | GCTAGC | 1 cut(s) | 1628 |
| NlaIII | CATG | 9 cut(s) | 8, 374, 408, 553, 648, 1087, 1202, 1313, 1980 |
| NlaIV | GGNNCC | 4 cut(s) | 220, 821, 1257, 1359 |
| NmuCI | GTSAC | 2 cut(s) | 1582, 1853 |
| NsiI | ATGCAT | 2 cut(s) | 6, 1648 |
| NspI | RCATGY | 2 cut(s) | 8, 1313 |
| NspV | TTCGAA | 1 cut(s) | 1240 |
| PctI | GAATGC | 2 cut(s) | 1526, 1579 |
| PdmI | GAANNNNTTC | 3 cut(s) | 207, 381, 1526 |
| PfeI | GAWTC | 3 cut(s) | 230, 352, 1810 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 773 |
| PkrI | GCNGC | 3 cut(s) | 123, 477, 1248 |
| PleI | GAGTC | 1 cut(s) | 1170 |
| PmaCI | CACGTG | 1 cut(s) | 1589 |
| PmlI | CACGTG | 1 cut(s) | 1589 |
| PpsI | GAGTC | 1 cut(s) | 1170 |
| Ppu21I | YACGTR | 1 cut(s) | 1589 |
| PshBI | ATTAAT | 1 cut(s) | 1493 |
| Psp124BI | GAGCTC | 1 cut(s) | 1448 |
| PspCI | CACGTG | 1 cut(s) | 1589 |
| PspN4I | GGNNCC | 4 cut(s) | 220, 821, 1257, 1359 |
| PstI | CTGCAG | 3 cut(s) | 1231, 1336, 1624 |
| PsuI | RGATCY | 3 cut(s) | 1255, 1357, 1543 |
| RsaI | GTAC | 3 cut(s) | 537, 1281, 1338 |
| RsaNI | GTAC | 3 cut(s) | 536, 1280, 1337 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1056, 2021 |
| SacI | GAGCTC | 1 cut(s) | 1448 |
| SaqAI | TTAA | 9 cut(s) | 150, 282, 491, 870, 900, 1004, 1113, 1493, 1907 |
| SatI | GCNGC | 3 cut(s) | 122, 476, 1247 |
| SchI | GAGTC | 1 cut(s) | 1171 |
| ScrFI | CCNGG | 2 cut(s) | 398, 399 |
| SduI | GDGCHC | 4 cut(s) | 404, 939, 1430, 1448 |
| SfaNI | GCATC | 5 cut(s) | 256, 704, 1633, 1729, 2025 |
| SfcI | CTRYAG | 3 cut(s) | 1227, 1332, 1620 |
| SfuI | TTCGAA | 1 cut(s) | 1240 |
| SmaI | CCCGGG | 1 cut(s) | 399 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1056, 2021 |
| SmlI | CTYRAG | 1 cut(s) | 19 |
| SmoI | CTYRAG | 1 cut(s) | 19 |
| SsiI | CCGC | 2 cut(s) | 142, 717 |
| SspI | AATATT | 4 cut(s) | 611, 641, 868, 2012 |
| SspMI | CTAG | 3 cut(s) | 1068, 1449, 1629 |
| SstI | GAGCTC | 1 cut(s) | 1448 |
| StyD4I | CCNGG | 2 cut(s) | 396, 397 |
| StyI | CCWWGG | 2 cut(s) | 1166, 1548 |
| TaaI | ACNGT | 2 cut(s) | 482, 1237 |
| TaiI | ACGT | 2 cut(s) | 541, 1591 |
| TaqI | TCGA | 3 cut(s) | 250, 954, 1240 |
| TfiI | GAWTC | 3 cut(s) | 230, 352, 1810 |
| Tru1I | TTAA | 9 cut(s) | 150, 282, 491, 870, 900, 1004, 1113, 1493, 1907 |
| Tru9I | TTAA | 9 cut(s) | 150, 282, 491, 870, 900, 1004, 1113, 1493, 1907 |
| TscAI | CASTG | 5 cut(s) | 487, 663, 778, 1153, 1624 |
| TseFI | GTSAC | 2 cut(s) | 1582, 1853 |
| TseI | GCWGC | 3 cut(s) | 121, 475, 1246 |
| Tsp45I | GTSAC | 2 cut(s) | 1582, 1853 |
| TspGWI | ACGGA | 1 cut(s) | 350 |
| TspMI | CCCGGG | 1 cut(s) | 397 |
| TspRI | CASTG | 5 cut(s) | 487, 663, 778, 1153, 1624 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 773 |
| VspI | ATTAAT | 1 cut(s) | 1493 |
| XapI | RAATTY | 4 cut(s) | 105, 698, 1129, 1175 |
| XceI | RCATGY | 2 cut(s) | 8, 1313 |
| XmaI | CCCGGG | 1 cut(s) | 397 |
| XmnI | GAANNNNTTC | 3 cut(s) | 207, 381, 1526 |
| XspI | CTAG | 3 cut(s) | 1068, 1449, 1629 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 1648 |