Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0006326

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG301800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3657 bp

ATGCCGTCCCTGATCTCCCAGGGCAAAATCCACCGCCTGGAGCTCGAGAATTTCAAGTCCTACCGGGGCCACCAGGTCATCGGCCCCTTCTCCGACTTCACGGCGATTATCGGCCCCAATGGCTCCGGCAAGTCCAACCTCATGGACGCCATAAGCTTCGTCCTTGGGGTCAAGACCGGCCAGCTCCGTGGGTCCCAGTTGAAGGACCTGATCTACGCCATGGACGACAGTGAGAAGAGCGAGAAAGGCCGCAGGGCGTTTGTGAGCTTGGTTTACCAGCTTGCGAATGAGTCTGAGATCCAGTTCACAAGGGCCATCACTAGCTCCGGCGGCAGTGAGTACCGCATAGACGGCAAGTCGGTATCGTGGGAAGCTTACAATGAGAAGCTTAAGTCCCTTGGAATTCTAGTCAAGGCTCGCAATTTTCTTGTCTTTCAGGGTGATGTCGAGTCCATTGCCTCTAAAAATCCTAAGGAACTCACTGGACTGCTTGAGCAGATCTCAGGGTCTGATGAGCTCAAGAGAGACTATGAAAAGTATGAAGAAGAGAAAGGCATAGCTGAAGAAAAAGCAGCCCTTGTTTATCAGAAAAAAAGAACCATAGTAGCAGAGAGGAAGCAAAAGAAAGAGCAAAAGGAAGAAGCTGAGAAGCACATTCGCCTGCAAAATGAACTGAAATCTTTGAAGAGAGAACACTTTTTGTGGCAGTTGTTTAACATAGAAAAAGATATAACGAAAACAACTGATGAGCTTGAAGCTGAAAAGAGAAGCCGCGAACAGGTTATGCAAGAACTAGATGATTTTCAGCAAGAAGCAAACAAAAAGAAGAAAGAACTTGCCAAATACTTAAAAGAGATTGCTCAATGTGAAAAGAAGATTGCTGAGAGAAGTAGTAGACTTGACAGAAGTAAACCAGAGCTGCTGAAACTGAAAGAGGAAATGTCGCGAATAAATTCAAAAATCAAGAAAAGTAAGACAGAGCTTGGTAGAAAAGAACAAGAACGGGGGAGACATAAGGAGGAAATTAAAAAGCTGCAGAAGGGCATCCAGGATTTGACCACACAACTAGAGGATTTACAGGAAAAAGGCCGAGACAGTGGTGAAAAATTACATTTAGACGATACTAAATTAAGGGAATATTTTAAAGTGAAGGAGGATGCTGGGATGAAAACTGCAAAGCTAAAAGATGAGAAAGAGGTTCTGGATCGGCAACAGCATGCTGATCTTGAAGCTCAAAAGAATTTGGAAGAAAATCTTCAACAGTTGAGAAGTAGGGAGCGTGAACTGGATTCACAGAATGAGCAAATGCTGACAAGGCAGAGAAAAATTAAGGAAAACTCTGCAAAACACAAGCAGGAATCTAAAAATCTGAATAATGAATTGCATGTGATGCAGGAGAAACATCAGAATGCCAGACAAAAGTATGAAAATCTGAAGTCAAAAATTGATGAATTAGAAAAGCAATTACGTGAACTGAAGGCCGACAGATATGAAAATGAGAGAGATTCCAGGTTGTCTCAGGCAGTGGAGACGCTCAAGCGCTTGTTTCAGGGTGTCCATGGTCGCATGACTGAACTCTGTAGGCCAACACAAAAGAAGTATAATCTTGCTGTCACTGTTGCCATGGGGAAATTTATGGATGCAGTCGTAGTTGAAGATGAACAAACAGGAAAGGAGTGTATCAAGTATTTGAAAGAACAAAGGCTTCCTCCCCAGACATTCATACCTCTCCAATCTGTTCGTGTAAAGCAAGTAATGGAGAGATTGCGTAACTTGGGTGGTACTGCAAAGCTGGTTTTTGATGTTGTCCAATTTGATCATGCTTTGGAGAAGGCTATTCTTTTTGCGGTTGGCAATACACTTGTTTGTGACGAACTTGATGAGGCTAAGCGCCTAAGCTGGAGTGGTGAGAGGTTCAAAGTTGTAACTGTTGATGGAATTATGCTGTCAAAATCTGGCACAATGACTGGGGGTACCAGTGGAGGAATGGAAGCTAGATCAAAACAATGGGATGATAAAAAAGTTGAAGGACTGAAGAAGAAGAAAGAACAGTTTGAGTTGGAGCTAGAAGAGCTTGGGTCAATTAGAGAGATGCAGCTAAAAGAGTCTGAAACAGCTGGCAGAATTAGTGGGCTTGACAAGAAAATCCAATATGCAGATATTGAGAAGGAAAGCATAAAGGACAAACTTGCAAATTTGGTCCACGAGAGGCAGAATATAAAAGAAGAGATTGATCGTATCAGTCCTGATCTTCTGAAGCTAAAACAAGCTGTAGATAAGCGGAGCACAGAAATCAATAAGCTTGAGAAGAGGATAAATGATATTGTTGACAGACTCTACAAAGGCTTTAGTAAATCTGTTGGGGTAGATAACATTCGCGAGTATGAAGAAAAACAACTCAAGGCTACCCAATCTATGGCTGAAGAGAGGCTTAGTTTGAGTAGCCAGCTATCAAAACTGAAATACCAGCTAGAGTATGAGCAAAATCGGGACATGGATACACGAATTGAAGAACTCCAATCATTTATTAGTAACCTACTAAAAGATTTAGAACGGGTTCAAAAGAAAGAGGCCGAAGCCAACTCTGCAGCAGAAAAAGCCTCTGATGAGATTCTTCAGTTGAAGGAAGAAGCACAAGAATGGAAGTCCAAGTCGGAAGGGTGTGAAAAGGAAATTCAAGAATGGAACAAGCGGGGTTCTACTGCAACATCAAATGTATCCAAACTTAATCGACAGATAAATTCTAAGGAATCGCAGATTGAGCAGCTAACATCTCGAAAGCAGGAGATAGTAGAAAATTGTGAACTACAGCAAATAAGCCTTCCGATCATTTCAGATCCAATGGAGACTGAATCCTCCACGACAGGCCCAGTATTTGATTTTGATGAGTTAGATGAGTCTCTATTGAGGAATAGGAGGCCTTCTGAGCGGGAGAAAGTTGAGTTAGACTTTAAGAAACAAATGGATGCCAAGTTATCAGAAATTGAAAGAACAGCTCCCAATTTGAAGGCCATGGACCAATATGAGGCTCTACAAGAAAAGGAAAGAGATGTAACTGGAGAGTTTGAAGTGGCCAGAAAAGAACAGAAGCAAAAGGCTGATCTGTTTAACTCGGTTAAGCAAAGGAGGTATGAGTTGTTTATGGATGCCTTCAACCATATTTCCAGTAATATTGATAAGATATACAAACAACTGACGAAGAGCAATACACATCCCCTGGGTGGGACGGCATATTTGAATTTAGAAAATGAAGATGATCCCTTTTTACATGGCGTCAAGTACACTACCATGCCCCCAACAAAGCGCTTTCGAGATATGGAACAATTATCTGGCGGAGAGAAAACTGTTGCAGCGTTAGCATTACTGTTTTCCATACACAGCTATAGGCCTTCGCCTTTTTTCATACTGGATGAAGTTGATGCTGCACTGGATAACTTAAATGTAGCAAAGGTTGCTCGATTCATCCGTTCAAAGTCATGCCAAGGAGCCAGGGTTAATCAGGATACTGAAGGAGGCAATGGTTTTCAAAGTATTGTAATATCTCTAAAAGATAGCTTCTATGACAAGGCTGAAGCTCTGGTTGGGGTTTTCAGGGACGCTGACATGGGTTGTTCCAAAACACTGTCATTTGACTTGACTAAATTTCGGGAGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000793 GO:0000819 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008278 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0022402 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044427 GO:0044444 GO:0044446 GO:0044464 GO:0051276 GO:0071840 GO:0098813

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 map04110 map04111 map04113 map04114

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

1218

Amino Acids

140.58

Weight (kDa)

7.27

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_15	PF13175	9 - 356	1.4e-14	AAA ATPase domain
SMC_N	PF02463	10 - 1199	4.7e-41	RecF/RecN/SMC N terminal domain
AAA_29	PF13555	11 - 55	3.9e-08	P-loop containing region of AAA domain
AAA_23	PF13476	12 - 219	3.7e-16	AAA domain
AAA_21	PF13304	33 - 61	1.5e-07	AAA domain, putative AbiEii toxin, Type IV TA system
SMC_hinge	PF06470	517 - 632	1.1e-26	SMC proteins Flexible Hinge Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54670
fragaria_vesca	FvH4_2g21371 FvH4_2g21371 FvH4_2g21371 FvH4_2g21371 FvH4_2g21371 FvH4_2g21371
malus_domestica	MD05G1196500.v1.1 MD10G1183700.v1.1
prunus_persica	Prupe.8G222900_v2.0.a1 Prupe.8G223100_v2.0.a1
pyrus_communis	pycom05g18350 pycom05g18360 pycom10g15870 pycom10g15880
rosa_chinensis	RchiOBHm_Chr6g0287971
rosa_laevigata	RLG00000012450
rosa_multiflora	Rmu_co8056790.1_g000001 Rmu_co8420611.1_g000001 Rmu_sc0005266.1_g000007
rosa_roxburghii	Rroxscaffold_7G00180620 Rroxscaffold_7G00180920
rosa_rugosa	Rorug06G0193700
rosa_samantha	Rh6AG303100 Rh6BG309300 Rh6DG301800
rosa_wichuraiana	Rw6G026210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1973
AccB1I	GGYRCC	1 cut(s)	1973
AccB7I	CCANNNNNTGG	2 cut(s)	37, 2416
AccBSI	CCGCTC	1 cut(s)	2929
AccI	GTMKAC	1 cut(s)	895
AccII	CGCG	3 cut(s)	774, 946, 2379
AclWI	GGATC	4 cut(s)	292, 1212, 2831, 3251
AcoI	YGGCCR	2 cut(s)	178, 3072
AcuI	CTGAAG	9 cut(s)	582, 1454, 1496, 2054, 2276, 2442, 2600, 3528, 3591
AcyI	GRCGYC	2 cut(s)	147, 3273
AfaI	GTAC	4 cut(s)	341, 1783, 1975, 3281
AfeI	AGCGCT	2 cut(s)	1541, 3305
AfiI	CCNNNNNNNGG	7 cut(s)	37, 202, 778, 2416, 3025, 3221, 3222
AflII	CTTAAG	1 cut(s)	389
AhdI	GACNNNNNGTC	1 cut(s)	355
AjnI	CCWGG	7 cut(s)	18, 36, 72, 1047, 1508, 3216, 3488
AjuI	GAANNNNNNNTTGG	2 cut(s)	3564, 3596
Alw21I	GWGCWC	3 cut(s)	45, 519, 2288
Alw26I	GTCTC	7 cut(s)	519, 1003, 1086, 1521, 1523, 2840, 2904
AlwI	GGATC	4 cut(s)	292, 1212, 2831, 3251
AlwNI	CAGNNNCTG	1 cut(s)	509
Ama87I	CYCGRG	1 cut(s)	44
Aor51HI	AGCGCT	2 cut(s)	1541, 3305
ApeKI	GCWGC	8 cut(s)	572, 919, 1033, 2095, 2588, 2764, 3350, 3422
ArsI	GACNNNNNNTTYG	2 cut(s)	3217, 3249
Asp700I	GAANNNNTTC	3 cut(s)	952, 1254, 2556
Asp718I	GGTACC	1 cut(s)	1973
AspLEI	GCGC	3 cut(s)	1542, 1893, 3306
AspS9I	GGNCC	9 cut(s)	67, 83, 113, 192, 205, 312, 2200, 2867, 3016
AsuC2I	CCSGG	1 cut(s)	65
AsuHPI	GGTGA	3 cut(s)	452, 1112, 1919
AvaI	CYCGRG	1 cut(s)	44
AvaII	GGWCC	4 cut(s)	192, 205, 2200, 3016
AxyI	CCTNAGG	1 cut(s)	471
BalI	TGGCCA	1 cut(s)	3074
BanI	GGYRCC	1 cut(s)	1973
BanII	GRGCYC	2 cut(s)	45, 519
BauI	CACGAG	1 cut(s)	2204
Bbv12I	GWGCWC	3 cut(s)	45, 519, 2288
BbvI	GCAGC	8 cut(s)	584, 906, 1020, 2107, 2600, 2776, 3362, 3409
BccI	CCATC	2 cut(s)	323, 1928
BceAI	ACGGC	3 cut(s)	117, 367, 3243
BcgI	CGANNNNNNTGC	2 cut(s)	437, 471
BciT130I	CCWGG	7 cut(s)	20, 38, 74, 1049, 1510, 3218, 3490
BciVI	GTATCC	3 cut(s)	2491, 2728, 3496
BclI	TGATCA	1 cut(s)	1816
BcnI	CCSGG	1 cut(s)	65
BcoDI	GTCTC	7 cut(s)	519, 1003, 1086, 1521, 1523, 2840, 2904
BfaI	CTAG	7 cut(s)	321, 407, 794, 1067, 1995, 2066, 2471
BfmI	CTRYAG	6 cut(s)	1034, 1579, 2271, 2586, 2807, 3382
BfoI	RGCGCY	3 cut(s)	1543, 1894, 3307
BfrI	CTTAAG	1 cut(s)	389
BfuI	GTATCC	3 cut(s)	2491, 2728, 3496
BglI	GCCNNNNNGGC	1 cut(s)	120
BglII	AGATCT	1 cut(s)	498
BlpI	GCTNAGC	1 cut(s)	1887
Bme1390I	CCNGG	8 cut(s)	20, 38, 65, 74, 1049, 1510, 3218, 3490
Bme18I	GGWCC	4 cut(s)	192, 205, 2200, 3016
BmeRI	GACNNNNNGTC	1 cut(s)	355
BmeT110I	CYCGRG	1 cut(s)	44
BmgT120I	GGNCC	9 cut(s)	67, 83, 113, 192, 205, 312, 2200, 2867, 3016
BmiI	GGNNCC	8 cut(s)	68, 85, 115, 124, 193, 194, 1975, 3487
BmrFI	CCNGG	8 cut(s)	20, 38, 65, 74, 1049, 1510, 3218, 3490
BmrI	ACTGGG	3 cut(s)	190, 1977, 2864
BmsI	GCATC	8 cut(s)	1053, 1147, 1380, 1630, 2082, 2956, 3136, 3409
BmuI	ACTGGG	3 cut(s)	190, 1977, 2864
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
BpmI	CTGGAG	3 cut(s)	59, 1921, 3078
Bpu10I	CCTNAGC	1 cut(s)	1895
Bpu1102I	GCTNAGC	1 cut(s)	1887
BpuEI	CTTGAG	5 cut(s)	503, 512, 1520, 2324, 2384
BpuMI	CCSGG	1 cut(s)	65
BsaAI	YACGTR	1 cut(s)	1469
BsaHI	GRCGYC	2 cut(s)	147, 3273
BsaXI	ACNNNNNCTCC	2 cut(s)	3477, 3507
Bsc4I	CCNNNNNNNGG	7 cut(s)	37, 202, 778, 2416, 3025, 3221, 3222
Bse118I	RCCGGY	1 cut(s)	176
Bse21I	CCTNAGG	1 cut(s)	471
Bse3DI	GCAATG	2 cut(s)	453, 3523
BseBI	CCWGG	7 cut(s)	20, 38, 74, 1049, 1510, 3218, 3490
BseLI	CCNNNNNNNGG	7 cut(s)	37, 202, 778, 2416, 3025, 3221, 3222
BseMI	GCAATG	2 cut(s)	453, 3523
BseMII	CTCAG	6 cut(s)	285, 516, 636, 873, 1532, 2916
BseXI	GCAGC	8 cut(s)	584, 906, 1020, 2107, 2600, 2776, 3362, 3409
BseYI	CCCAGC	1 cut(s)	1160
BsgI	GTGCAG	1 cut(s)	3408
Bsh1236I	CGCG	3 cut(s)	774, 946, 2379
BshNI	GGYRCC	1 cut(s)	1973
BsiHKAI	GWGCWC	3 cut(s)	45, 519, 2288
BsiHKCI	CYCGRG	1 cut(s)	44
BsiSI	CCGG	4 cut(s)	64, 126, 177, 327
BslFI	GGGAC	5 cut(s)	178, 379, 2504, 3238, 3608
BslI	CCNNNNNNNGG	7 cut(s)	37, 202, 778, 2416, 3025, 3221, 3222
BsmAI	GTCTC	7 cut(s)	519, 1003, 1086, 1521, 1523, 2840, 2904
BsmBI	CGTCTC	1 cut(s)	1523
BsmFI	GGGAC	5 cut(s)	178, 379, 2504, 3238, 3608
BsmI	GAATGC	1 cut(s)	1414
BsoBI	CYCGRG	1 cut(s)	44
Bsp1286I	GDGCHC	3 cut(s)	45, 519, 2288
Bsp1720I	GCTNAGC	1 cut(s)	1887
Bsp19I	CCATGG	4 cut(s)	219, 1558, 1623, 3012
Bsp68I	TCGCGA	2 cut(s)	946, 2379
BspCNI	CTCAG	6 cut(s)	286, 515, 637, 874, 1531, 2917
BspFNI	CGCG	3 cut(s)	774, 946, 2379
BspLI	GGNNCC	8 cut(s)	68, 85, 115, 124, 193, 194, 1975, 3487
BspMAI	CTGCAG	2 cut(s)	1038, 2590
BspPI	GGATC	4 cut(s)	292, 1212, 2831, 3251
BspQI	GCTCTTC	3 cut(s)	230, 2064, 3194
BspT107I	GGYRCC	1 cut(s)	1973
BspTI	CTTAAG	1 cut(s)	389
BsrBI	CCGCTC	1 cut(s)	2929
BsrDI	GCAATG	2 cut(s)	453, 3523
BsrFI	RCCGGY	1 cut(s)	176
BssAI	RCCGGY	1 cut(s)	176
BssNI	GRCGYC	2 cut(s)	147, 3273
BssSI	CACGAG	1 cut(s)	2204
BssT1I	CCWWGG	7 cut(s)	163, 219, 397, 1558, 1623, 3012, 3481
Bst2BI	CACGAG	1 cut(s)	2204
Bst2UI	CCWGG	7 cut(s)	20, 38, 74, 1049, 1510, 3218, 3490
Bst4CI	ACNGT	9 cut(s)	230, 1097, 1263, 1618, 1930, 2052, 3346, 3366, 3624
Bst6I	CTCTTC	8 cut(s)	230, 540, 680, 2064, 2220, 2303, 2418, 3194
BstACI	GRCGYC	2 cut(s)	147, 3273
BstAFI	CTTAAG	1 cut(s)	389
BstAPI	GCANNNNNTGC	2 cut(s)	1390, 3452
BstBAI	YACGTR	1 cut(s)	1469
BstC8I	GCNNGC	7 cut(s)	182, 282, 418, 662, 1218, 2119, 2447
BstDSI	CCRYGG	5 cut(s)	187, 219, 1558, 1623, 3012
BstFNI	CGCG	3 cut(s)	774, 946, 2379
BstH2I	RGCGCY	3 cut(s)	1543, 1894, 3307
BstHHI	GCGC	3 cut(s)	1542, 1893, 3306
BstMAI	GTCTC	7 cut(s)	519, 1003, 1086, 1521, 1523, 2840, 2904
BstNI	CCWGG	7 cut(s)	20, 38, 74, 1049, 1510, 3218, 3490
BstNSI	RCATGY	2 cut(s)	1220, 1388
BstSCI	CCNGG	8 cut(s)	18, 36, 63, 72, 1047, 1508, 3216, 3488
BstSFI	CTRYAG	6 cut(s)	1034, 1579, 2271, 2586, 2807, 3382
BstUI	CGCG	3 cut(s)	774, 946, 2379
BstV1I	GCAGC	8 cut(s)	584, 906, 1020, 2107, 2600, 2776, 3362, 3409
BstX2I	RGATCY	3 cut(s)	297, 498, 2836
BstXI	CCANNNNNNTGG	2 cut(s)	142, 188
BstYI	RGATCY	3 cut(s)	297, 498, 2836
Bsu36I	CCTNAGG	1 cut(s)	471
BsuI	GTATCC	3 cut(s)	2491, 2728, 3496
BtgI	CCRYGG	5 cut(s)	187, 219, 1558, 1623, 3012
BtsI	GCAGTG	2 cut(s)	340, 1530
BtsIMutI	CAGTG	9 cut(s)	235, 340, 480, 1102, 1530, 1614, 1984, 3425, 3620
BtuMI	TCGCGA	2 cut(s)	946, 2379
Cac8I	GCNNGC	7 cut(s)	182, 282, 418, 662, 1218, 2119, 2447
CaiI	CAGNNNCTG	1 cut(s)	509
CfoI	GCGC	3 cut(s)	1542, 1893, 3306
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	9 cut(s)	67, 83, 113, 192, 205, 312, 2200, 2867, 3016
CseI	GACGC	4 cut(s)	155, 1540, 3262, 3605
CsiI	ACCWGGT	1 cut(s)	72
Csp6I	GTAC	4 cut(s)	340, 1782, 1974, 3280
CviQI	GTAC	4 cut(s)	340, 1782, 1974, 3280
DraI	TTTAAA	1 cut(s)	1144
DriI	GACNNNNNGTC	1 cut(s)	355
EaeI	YGGCCR	2 cut(s)	178, 3072
Eam1104I	CTCTTC	8 cut(s)	230, 540, 680, 2064, 2220, 2303, 2418, 3194
Eam1105I	GACNNNNNGTC	1 cut(s)	355
EarI	CTCTTC	8 cut(s)	230, 540, 680, 2064, 2220, 2303, 2418, 3194
EciI	GGCGGA	1 cut(s)	3348
Ecl136II	GAGCTC	2 cut(s)	43, 517
Eco130I	CCWWGG	7 cut(s)	163, 219, 397, 1558, 1623, 3012, 3481
Eco147I	AGGCCT	2 cut(s)	2920, 3388
Eco24I	GRGCYC	2 cut(s)	45, 519
Eco47I	GGWCC	4 cut(s)	192, 205, 2200, 3016
Eco47III	AGCGCT	2 cut(s)	1541, 3305
Eco53kI	GAGCTC	2 cut(s)	43, 517
Eco57I	CTGAAG	9 cut(s)	582, 1454, 1496, 2054, 2276, 2442, 2600, 3528, 3591
Eco81I	CCTNAGG	1 cut(s)	471
Eco88I	CYCGRG	1 cut(s)	44
EcoICRI	GAGCTC	2 cut(s)	43, 517
EcoO109I	RGGNCCY	2 cut(s)	192, 205
EcoRI	GAATTC	1 cut(s)	402
EcoRII	CCWGG	7 cut(s)	18, 36, 72, 1047, 1508, 3216, 3488
EcoT14I	CCWWGG	7 cut(s)	163, 219, 397, 1558, 1623, 3012, 3481
EcoT38I	GRGCYC	2 cut(s)	45, 519
ErhI	CCWWGG	7 cut(s)	163, 219, 397, 1558, 1623, 3012, 3481
Esp3I	CGTCTC	1 cut(s)	1523
FalI	AAGNNNNNCTT	6 cut(s)	561, 593, 1239, 1271, 2415, 2447
FaqI	GGGAC	5 cut(s)	178, 379, 2504, 3238, 3608
FauI	CCCGC	2 cut(s)	2685, 2922
FbaI	TGATCA	1 cut(s)	1816
FblI	GTMKAC	1 cut(s)	895
FriOI	GRGCYC	2 cut(s)	45, 519
FspBI	CTAG	7 cut(s)	321, 407, 794, 1067, 1995, 2066, 2471
GlaI	GCGC	3 cut(s)	1541, 1892, 3305
GsaI	CCCAGC	1 cut(s)	1164
GsuI	CTGGAG	3 cut(s)	59, 1921, 3078
HaeII	RGCGCY	3 cut(s)	1543, 1894, 3307
HapII	CCGG	4 cut(s)	64, 126, 177, 327
HgaI	GACGC	4 cut(s)	155, 1540, 3262, 3605
HhaI	GCGC	3 cut(s)	1542, 1893, 3306
Hin1I	GRCGYC	2 cut(s)	147, 3273
Hin6I	GCGC	3 cut(s)	1540, 1891, 3304
HinP1I	GCGC	3 cut(s)	1540, 1891, 3304
HincII	GTYRAC	1 cut(s)	2329
HindII	GTYRAC	1 cut(s)	2329
HindIII	AAGCTT	4 cut(s)	154, 372, 386, 2300
HpaII	CCGG	4 cut(s)	64, 126, 177, 327
HphI	GGTGA	3 cut(s)	452, 1112, 1919
HpyCH4III	ACNGT	9 cut(s)	230, 1097, 1263, 1618, 1930, 2052, 3346, 3366, 3624
HpyCH4IV	ACGT	1 cut(s)	1468
HpySE526I	ACGT	1 cut(s)	1468
Hsp92I	GRCGYC	2 cut(s)	147, 3273
HspAI	GCGC	3 cut(s)	1540, 1891, 3304
KflI	GGGWCCC	1 cut(s)	192
KpnI	GGTACC	1 cut(s)	1977
Ksp22I	TGATCA	1 cut(s)	1816
LguI	GCTCTTC	3 cut(s)	230, 2064, 3194
LmnI	GCTCC	9 cut(s)	40, 128, 189, 329, 1276, 2062, 2283, 3001, 3485
Lsp1109I	GCAGC	8 cut(s)	584, 906, 1020, 2107, 2600, 2776, 3362, 3409
LweI	GCATC	8 cut(s)	1053, 1147, 1380, 1630, 2082, 2956, 3136, 3409
MabI	ACCWGGT	1 cut(s)	72
MaeI	CTAG	7 cut(s)	321, 407, 794, 1067, 1995, 2066, 2471
MaeII	ACGT	1 cut(s)	1468
MaeIII	GTNAC	6 cut(s)	1612, 1769, 1868, 1924, 2531, 3052
MbiI	CCGCTC	1 cut(s)	2929
MflI	RGATCY	3 cut(s)	297, 498, 2836
MhlI	GDGCHC	3 cut(s)	45, 519, 2288
MlsI	TGGCCA	1 cut(s)	3074
MluNI	TGGCCA	1 cut(s)	3074
MlyI	GAGTC	5 cut(s)	299, 458, 2114, 2328, 2906
MmeI	TCCRAC	4 cut(s)	117, 159, 2040, 2634
Mox20I	TGGCCA	1 cut(s)	3074
MroXI	GAANNNNTTC	3 cut(s)	952, 1254, 2556
MscI	TGGCCA	1 cut(s)	3074
MslI	CAYNNNNRTG	3 cut(s)	1407, 2638, 3287
Msp20I	TGGCCA	1 cut(s)	3074
MspA1I	CMGCKG	1 cut(s)	2117
MspCI	CTTAAG	1 cut(s)	389
MspI	CCGG	4 cut(s)	64, 126, 177, 327
MspR9I	CCNGG	8 cut(s)	20, 38, 65, 74, 1049, 1510, 3218, 3490
Mva1269I	GAATGC	1 cut(s)	1414
MvaI	CCWGG	7 cut(s)	20, 38, 74, 1049, 1510, 3218, 3490
MvnI	CGCG	3 cut(s)	774, 946, 2379
NciI	CCSGG	1 cut(s)	65
NcoI	CCATGG	4 cut(s)	219, 1558, 1623, 3012
NlaIV	GGNNCC	8 cut(s)	68, 85, 115, 124, 193, 194, 1975, 3487
NmeAIII	GCCGAG	1 cut(s)	1115
NmuCI	GTSAC	2 cut(s)	1612, 1868
NruI	TCGCGA	2 cut(s)	946, 2379
NspI	RCATGY	2 cut(s)	1220, 1388
PaeI	GCATGC	1 cut(s)	1220
PaeR7I	CTCGAG	1 cut(s)	44
PasI	CCCWGGG	2 cut(s)	19, 3217
PceI	AGGCCT	2 cut(s)	2920, 3388
PciSI	GCTCTTC	3 cut(s)	230, 2064, 3194
PcsI	WCGNNNNNNNCGW	2 cut(s)	222, 3463
PctI	GAATGC	1 cut(s)	1414
PdmI	GAANNNNTTC	3 cut(s)	952, 1254, 2556
PfeI	GAWTC	7 cut(s)	1289, 1358, 1505, 2611, 2750, 2852, 3459
PflMI	CCANNNNNTGG	2 cut(s)	37, 2416
PfoI	TCCNGGA	1 cut(s)	1047
PleI	GAGTC	5 cut(s)	298, 457, 2113, 2328, 2905
PpsI	GAGTC	5 cut(s)	298, 457, 2113, 2328, 2905
Ppu21I	YACGTR	1 cut(s)	1469
PpuMI	RGGWCCY	2 cut(s)	192, 205
Psp124BI	GAGCTC	2 cut(s)	45, 519
Psp5II	RGGWCCY	2 cut(s)	192, 205
Psp6I	CCWGG	7 cut(s)	18, 36, 72, 1047, 1508, 3216, 3488
PspFI	CCCAGC	1 cut(s)	1160
PspGI	CCWGG	7 cut(s)	18, 36, 72, 1047, 1508, 3216, 3488
PspN4I	GGNNCC	8 cut(s)	68, 85, 115, 124, 193, 194, 1975, 3487
PspPI	GGNCC	9 cut(s)	67, 83, 113, 192, 205, 312, 2200, 2867, 3016
PspPPI	RGGWCCY	2 cut(s)	192, 205
PstI	CTGCAG	2 cut(s)	1038, 2590
PstNI	CAGNNNCTG	1 cut(s)	509
PsuI	RGATCY	3 cut(s)	297, 498, 2836
PvuII	CAGCTG	1 cut(s)	2117
RruI	TCGCGA	2 cut(s)	946, 2379
RsaI	GTAC	4 cut(s)	341, 1783, 1975, 3281
RsaNI	GTAC	4 cut(s)	340, 1782, 1974, 3280
RseI	CAYNNNNRTG	3 cut(s)	1407, 2638, 3287
SacI	GAGCTC	2 cut(s)	45, 519
SapI	GCTCTTC	3 cut(s)	230, 2064, 3194
Sau96I	GGNCC	9 cut(s)	67, 83, 113, 192, 205, 312, 2200, 2867, 3016
SchI	GAGTC	5 cut(s)	299, 458, 2114, 2328, 2906
ScrFI	CCNGG	8 cut(s)	20, 38, 65, 74, 1049, 1510, 3218, 3490
SduI	GDGCHC	3 cut(s)	45, 519, 2288
SexAI	ACCWGGT	1 cut(s)	72
SfaNI	GCATC	8 cut(s)	1053, 1147, 1380, 1630, 2082, 2956, 3136, 3409
SfcI	CTRYAG	6 cut(s)	1034, 1579, 2271, 2586, 2807, 3382
Sfr274I	CTCGAG	1 cut(s)	44
SinI	GGWCC	4 cut(s)	192, 205, 2200, 3016
SlaI	CTCGAG	1 cut(s)	44
SmiMI	CAYNNNNRTG	3 cut(s)	1407, 2638, 3287
SmlI	CTYRAG	7 cut(s)	44, 389, 491, 518, 1535, 2303, 2399
SmoI	CTYRAG	7 cut(s)	44, 389, 491, 518, 1535, 2303, 2399
SphI	GCATGC	1 cut(s)	1220
SseBI	AGGCCT	2 cut(s)	2920, 3388
SspI	AATATT	2 cut(s)	1139, 3172
SspMI	CTAG	7 cut(s)	321, 407, 794, 1067, 1995, 2066, 2471
SstI	GAGCTC	2 cut(s)	45, 519
StuI	AGGCCT	2 cut(s)	2920, 3388
StyD4I	CCNGG	8 cut(s)	18, 36, 63, 72, 1047, 1508, 3216, 3488
StyI	CCWWGG	7 cut(s)	163, 219, 397, 1558, 1623, 3012, 3481
TaaI	ACNGT	9 cut(s)	230, 1097, 1263, 1618, 1930, 2052, 3346, 3366, 3624
TaiI	ACGT	1 cut(s)	1471
TaqI	TCGA	6 cut(s)	45, 447, 2731, 2776, 3310, 3457
TatI	WGTACW	1 cut(s)	3279
TauI	GCSGC	3 cut(s)	252, 333, 774
TfiI	GAWTC	7 cut(s)	1289, 1358, 1505, 2611, 2750, 2852, 3459
TscAI	CASTG	9 cut(s)	235, 340, 487, 1102, 1530, 1621, 1984, 3432, 3627
TseFI	GTSAC	2 cut(s)	1612, 1868
TseI	GCWGC	8 cut(s)	572, 919, 1033, 2095, 2588, 2764, 3350, 3422
Tsp45I	GTSAC	2 cut(s)	1612, 1868
TspGWI	ACGGA	2 cut(s)	176, 3455
TspRI	CASTG	9 cut(s)	235, 340, 487, 1102, 1530, 1621, 1984, 3432, 3627
Van91I	CCANNNNNTGG	2 cut(s)	37, 2416
Vha464I	CTTAAG	1 cut(s)	389
VpaK11BI	GGWCC	4 cut(s)	192, 205, 2200, 3016
XceI	RCATGY	2 cut(s)	1220, 1388
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1984
XhoI	CTCGAG	1 cut(s)	44
XmiI	GTMKAC	1 cut(s)	895
XmnI	GAANNNNTTC	3 cut(s)	952, 1254, 2556
XspI	CTAG	7 cut(s)	321, 407, 794, 1067, 1995, 2066, 2471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.