No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G42725 |
| malus_domestica | MD15G1091800.v1.1 MD15G1217200.v1.1 |
| prunus_persica | Prupe.7G199300_v2.0.a1 |
| pyrus_communis | pycom15g19280 |
| rosa_chinensis | RchiOBHm_Chr1g0362471 RchiOBHm_Chr2g0094891 |
| rosa_laevigata | RLG00000023091 RLG00000033400 |
| rosa_multiflora | Rmu_co8428099.1_g000001 Rmu_sc0004969.1_g000003 Rmu_sc0041750.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00107930 |
| rosa_rugosa | Rorug02G0048700.1 |
| rosa_samantha | Rh1AG014600 Rh1DG034300 Rh2AG095200 Rh2AG096300 Rh2BG096200 Rh2CG098200 Rh2DG094800 Rh2DG094900 Rh6CG464700 Rh6DG214600 Rh6DG451300 |
| rosa_wichuraiana | Rw2G007160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 217 |
| AcoI | YGGCCR | 1 cut(s) | 246 |
| AgsI | TTSAA | 2 cut(s) | 79, 233 |
| AjiI | CACGTC | 1 cut(s) | 167 |
| AluBI | AGCT | 1 cut(s) | 136 |
| AluI | AGCT | 1 cut(s) | 136 |
| Alw26I | GTCTC | 1 cut(s) | 173 |
| Ama87I | CYCGRG | 1 cut(s) | 182 |
| AoxI | GGCC | 2 cut(s) | 192, 246 |
| AsuHPI | GGTGA | 1 cut(s) | 138 |
| AvaI | CYCGRG | 1 cut(s) | 182 |
| BaeGI | GKGCMC | 1 cut(s) | 49 |
| BalI | TGGCCA | 1 cut(s) | 248 |
| BanII | GRGCYC | 1 cut(s) | 243 |
| BcoDI | GTCTC | 1 cut(s) | 173 |
| BfaI | CTAG | 1 cut(s) | 42 |
| BisI | GCNGC | 1 cut(s) | 218 |
| BlsI | GCNGC | 1 cut(s) | 219 |
| BmeT110I | CYCGRG | 1 cut(s) | 182 |
| BmgBI | CACGTC | 1 cut(s) | 167 |
| BmiI | GGNNCC | 1 cut(s) | 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 225 |
| BsaJI | CCNNGG | 1 cut(s) | 243 |
| BseDI | CCNNGG | 1 cut(s) | 243 |
| BseMII | CTCAG | 1 cut(s) | 110 |
| BseRI | GAGGAG | 2 cut(s) | 48, 251 |
| BseSI | GKGCMC | 1 cut(s) | 49 |
| BshFI | GGCC | 2 cut(s) | 194, 248 |
| BsiHKCI | CYCGRG | 1 cut(s) | 182 |
| BsmAI | GTCTC | 1 cut(s) | 173 |
| BsmBI | CGTCTC | 1 cut(s) | 173 |
| BsmI | GAATGC | 1 cut(s) | 70 |
| BsnI | GGCC | 2 cut(s) | 194, 248 |
| BsoBI | CYCGRG | 1 cut(s) | 182 |
| Bsp1286I | GDGCHC | 2 cut(s) | 49, 243 |
| Bsp19I | CCATGG | 1 cut(s) | 243 |
| BspACI | CCGC | 1 cut(s) | 217 |
| BspANI | GGCC | 2 cut(s) | 194, 248 |
| BspCNI | CTCAG | 1 cut(s) | 109 |
| BspLI | GGNNCC | 1 cut(s) | 240 |
| BssECI | CCNNGG | 1 cut(s) | 243 |
| BssT1I | CCWWGG | 1 cut(s) | 243 |
| Bst6I | CTCTTC | 2 cut(s) | 24, 128 |
| BstC8I | GCNNGC | 1 cut(s) | 222 |
| BstDEI | CTNAG | 2 cut(s) | 96, 225 |
| BstDSI | CCRYGG | 1 cut(s) | 243 |
| BstMAI | GTCTC | 1 cut(s) | 173 |
| BstSLI | GKGCMC | 1 cut(s) | 49 |
| BsuRI | GGCC | 2 cut(s) | 194, 248 |
| BtgI | CCRYGG | 1 cut(s) | 243 |
| BtrI | CACGTC | 1 cut(s) | 167 |
| Cac8I | GCNNGC | 1 cut(s) | 222 |
| CviAII | CATG | 1 cut(s) | 244 |
| CviJI | RGCY | 6 cut(s) | 136, 194, 220, 241, 248, 278 |
| CviKI_1 | RGCY | 6 cut(s) | 136, 194, 220, 241, 248, 278 |
| DdeI | CTNAG | 2 cut(s) | 96, 225 |
| EaeI | YGGCCR | 1 cut(s) | 246 |
| Eam1104I | CTCTTC | 2 cut(s) | 24, 128 |
| EarI | CTCTTC | 2 cut(s) | 24, 128 |
| Eco130I | CCWWGG | 1 cut(s) | 243 |
| Eco24I | GRGCYC | 1 cut(s) | 243 |
| Eco88I | CYCGRG | 1 cut(s) | 182 |
| EcoT14I | CCWWGG | 1 cut(s) | 243 |
| EcoT38I | GRGCYC | 1 cut(s) | 243 |
| ErhI | CCWWGG | 1 cut(s) | 243 |
| Esp3I | CGTCTC | 1 cut(s) | 173 |
| FaeI | CATG | 1 cut(s) | 247 |
| FaiI | YATR | 3 cut(s) | 87, 159, 245 |
| FatI | CATG | 1 cut(s) | 243 |
| Fnu4HI | GCNGC | 1 cut(s) | 218 |
| FriOI | GRGCYC | 1 cut(s) | 243 |
| Fsp4HI | GCNGC | 1 cut(s) | 218 |
| FspBI | CTAG | 1 cut(s) | 42 |
| GluI | GCNGC | 1 cut(s) | 218 |
| HaeIII | GGCC | 2 cut(s) | 194, 248 |
| Hin1II | CATG | 1 cut(s) | 247 |
| HindIII | AAGCTT | 1 cut(s) | 134 |
| HinfI | GANTC | 1 cut(s) | 109 |
| HphI | GGTGA | 1 cut(s) | 138 |
| Hpy188I | TCNGA | 1 cut(s) | 63 |
| Hpy188III | TCNNGA | 5 cut(s) | 98, 106, 182, 184, 233 |
| Hpy99I | CGWCG | 1 cut(s) | 202 |
| HpyAV | CCTTC | 1 cut(s) | 183 |
| HpyCH4IV | ACGT | 1 cut(s) | 166 |
| HpyCH4V | TGCA | 1 cut(s) | 266 |
| HpyF3I | CTNAG | 2 cut(s) | 96, 225 |
| HpySE526I | ACGT | 1 cut(s) | 166 |
| Hsp92II | CATG | 1 cut(s) | 247 |
| LmnI | GCTCC | 1 cut(s) | 238 |
| LpnPI | CCDG | 2 cut(s) | 83, 91 |
| MaeI | CTAG | 1 cut(s) | 42 |
| MaeII | ACGT | 1 cut(s) | 166 |
| MaeIII | GTNAC | 1 cut(s) | 32 |
| MboII | GAAGA | 2 cut(s) | 11, 115 |
| MhlI | GDGCHC | 2 cut(s) | 49, 243 |
| MlsI | TGGCCA | 1 cut(s) | 248 |
| MluCI | AATT | 1 cut(s) | 261 |
| MluNI | TGGCCA | 1 cut(s) | 248 |
| MnlI | CCTC | 5 cut(s) | 66, 69, 159, 184, 229 |
| Mox20I | TGGCCA | 1 cut(s) | 248 |
| MscI | TGGCCA | 1 cut(s) | 248 |
| MseI | TTAA | 1 cut(s) | 273 |
| Msp20I | TGGCCA | 1 cut(s) | 248 |
| Mva1269I | GAATGC | 1 cut(s) | 70 |
| NcoI | CCATGG | 1 cut(s) | 243 |
| NlaIII | CATG | 1 cut(s) | 247 |
| NlaIV | GGNNCC | 1 cut(s) | 240 |
| NmuCI | GTSAC | 1 cut(s) | 32 |
| PaeR7I | CTCGAG | 1 cut(s) | 182 |
| PctI | GAATGC | 1 cut(s) | 70 |
| PfeI | GAWTC | 1 cut(s) | 109 |
| PkrI | GCNGC | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 1 cut(s) | 240 |
| SaqAI | TTAA | 1 cut(s) | 273 |
| SatI | GCNGC | 1 cut(s) | 218 |
| SduI | GDGCHC | 2 cut(s) | 49, 243 |
| SetI | ASST | 4 cut(s) | 138, 151, 169, 231 |
| Sfr274I | CTCGAG | 1 cut(s) | 182 |
| SlaI | CTCGAG | 1 cut(s) | 182 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| Sse9I | AATT | 1 cut(s) | 261 |
| SsiI | CCGC | 1 cut(s) | 217 |
| SspMI | CTAG | 1 cut(s) | 42 |
| StyI | CCWWGG | 1 cut(s) | 243 |
| TaiI | ACGT | 1 cut(s) | 169 |
| TaqI | TCGA | 1 cut(s) | 183 |
| TasI | AATT | 1 cut(s) | 261 |
| TauI | GCSGC | 1 cut(s) | 220 |
| TfiI | GAWTC | 1 cut(s) | 109 |
| Tru1I | TTAA | 1 cut(s) | 273 |
| Tru9I | TTAA | 1 cut(s) | 273 |
| TseFI | GTSAC | 1 cut(s) | 32 |
| Tsp45I | GTSAC | 1 cut(s) | 32 |
| TspDTI | ATGAA | 3 cut(s) | 11, 115, 146 |
| XhoI | CTCGAG | 1 cut(s) | 182 |
| XspI | CTAG | 1 cut(s) | 42 |