Rh7AG056800

Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0009976
Physical Location & Seq
Forward (+)
3898222 .. 3902108
3887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG056800.1

Sequence Viewer

Length: 1377 bp
ATGGCGAAGCTTGGACCAACCCCAGATGCGATTTCGACCCTCTTGGCCAACCCATCGCCGAAAGAGTCCAGCCCGATCCCGGAGATCGTCGTCCAGGTCGTCGACCTCAATCTTAAGGGCATCAACCGTTATATGTTTACTGCTAGTGATGGAAAGATGAGGCTAAAGACGATGTTGAGCACAGAATTGAGTCCTGATGTTATTTCTGGGAAAATTCAGAACCTGGGCCTCATTCGACTTCTTGATTACACTGTTAATGACATTCCAAACAAGCCCGAAAAATATATGATTGTAATAAACTGTGAGATGGTTTCACCTGCGCTTGAGATGGAGATTAAAAGTGAGGTCAGTAAAGATGAGGTGAAAGGAGAACAGGTTGGGATTATTTTGAAGCCCAAGCAAGAGATGGTGACTAAATCAGCTGCTCAAATTATGCATGAGCAGAATGCAAATATGGCCCCGGCTGCACGGATGGCCATGACCAGAAGGGTTCATCCTATTGTTTCCTTGAATCCTTATCAAGGCAATTGGACCATAAAGGTTCGTGTTACAAACAAGGGAACCATGCGTACTTACTCGAATGCTAGAGGTCAAGGCTGTGTCTTCAATGTGGAGTTAACAGATGAAGATGGAACTGAAATTCGAGCTACAATGTTTAATGAAGCTGCAAAGAAGTTCTATGAAAAGTTTCAACTAGGGAAGGTCTATTATGTTTCAAAGGGAGCTCTAAAGGTTGCTAACAAGAAGTTTAGCACAGTACAAAATGATTATGAAATGACCTTAAATGAGAATTCTGAGGTGGATGAAGTCAGCAATGAAGAAGCTTTTGTTCCTGAAACAAAATTTGATTTTATCCCAATTGATATGTTGGGTCCTCATGTTAACAGCAAGGTGCTTGTGGATGTTATTGGAGTTGTTACAAATGTGTCTCCTACGATGAGCATCAGAAGAAAGAGCGACAATGAGAATATCCCAAAGCGTGACATTACCATTGCTGATGAGTCGAAAAAAGTGGTTGTGGTTTCTTTATGGAATGATCTTGCAACTGGTGTTGGCCAGGAATTGCTGGACATTGCTGATCAATCTCCTGTAGTTGCTATCAAATCCCTTAAAGTTGGAGACTATCAAGGTGTATCCTTGTCTACGTTGTCCAGGAGCTCAATATTTGTAAATCCAGATTTACCTGAAGCAAAGAGGTTGAAATCCTGGTATGATTCTGAAGGTAAAGAGGTTTCAATGGCATCTGTTGGCTCTGGTATGAGCCCATCAGCCAATAGTGGAGCATGGTCCATGTACTCTGATAGAATCTCCCTGTCTTATTTGAAAGATAACCCATCCTTGGGTGAGGACAAGGTAATACTAGTTCCCTTAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000278 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005662 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006278 GO:0006279 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007004 GO:0007049 GO:0007063 GO:0007088 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010224 GO:0010556 GO:0010557 GO:0010564 GO:0010604 GO:0010638 GO:0010639 GO:0010833 GO:0010948 GO:0016043 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022402 GO:0022414 GO:0030894 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032200 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032392 GO:0032508 GO:0032879 GO:0032880 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0035861 GO:0042162 GO:0042592 GO:0043047 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044786 GO:0045786 GO:0045839 GO:0045875 GO:0045930 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051098 GO:0051101 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051276 GO:0051321 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0060249 GO:0060255 GO:0060341 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070034 GO:0071103 GO:0071704 GO:0071840 GO:0071897 GO:0071922 GO:0071923 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0098687 GO:0098847 GO:0106111 GO:0106112 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902969 GO:1903046 GO:1903047 GO:1903827 GO:1903828 GO:1904356 GO:1904358 GO:1905405 GO:1905412 GO:1905634 GO:2000112 GO:2000278 GO:2000573 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03030 ko03420 ko03430 ko03440 ko03460 map03030 map03420 map03430 map03440 map03460
Pfam Domains
Protein Families
REPA_OB_2 Rep-A_N Rep_fac-A_C tRNA_anti-codon

Protein Analysis

458

Amino Acids

50.56

Weight (kDa)

5.72

Isoelectric Point (pI)

35.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rep-A_N PF04057 7 - 105 1e-21 Replication factor-A protein 1, N-terminal domain
DUF223 PF02721 165 - 268 8.1e-08 Domain of unknown function DUF223
tRNA_anti-codon PF01336 177 - 261 1.7e-09 OB-fold nucleic acid binding domain
REPA_OB_2 PF16900 294 - 391 3.1e-23 Replication protein A OB domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 325
Acc36I ACCTGC 1 cut(s) 325
AccI GTMKAC 2 cut(s) 102, 1142
AclWI GGATC 1 cut(s) 70
AcoI YGGCCR 3 cut(s) 45, 474, 1054
AcsI RAATTY 4 cut(s) 213, 639, 790, 842
AcuI CTGAAG 2 cut(s) 1206, 1239
AfaI GTAC 3 cut(s) 571, 759, 1295
AfiI CCNNNNNNNGG 4 cut(s) 79, 521, 1339, 1340
AflII CTTAAG 1 cut(s) 113
AgsI TTSAA 8 cut(s) 391, 511, 607, 692, 717, 1201, 1236, 1324
AhlI ACTAGT 1 cut(s) 1360
AjnI CCWGG 5 cut(s) 93, 222, 1056, 1151, 1205
AluBI AGCT 7 cut(s) 10, 422, 647, 665, 725, 824, 1158
AluI AGCT 7 cut(s) 10, 422, 647, 665, 725, 824, 1158
Alw21I GWGCWC 3 cut(s) 182, 727, 1160
Alw26I GTCTC 2 cut(s) 933, 1113
AlwI GGATC 1 cut(s) 70
AlwNI CAGNNNCTG 1 cut(s) 223
AoxI GGCC 5 cut(s) 45, 226, 456, 474, 1054
ApeKI GCWGC 3 cut(s) 422, 464, 665
ApoI RAATTY 4 cut(s) 213, 639, 790, 842
Asp700I GAANNNNTTC 1 cut(s) 687
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 6 cut(s) 14, 226, 457, 531, 872, 1287
AsuC2I CCSGG 2 cut(s) 80, 461
AsuHPI GGTGA 4 cut(s) 306, 373, 421, 1355
AvaII GGWCC 4 cut(s) 14, 531, 872, 1287
BalI TGGCCA 3 cut(s) 47, 476, 1056
BanII GRGCYC 3 cut(s) 727, 1160, 1265
BbsI GAAGAC 1 cut(s) 595
Bbv12I GWGCWC 3 cut(s) 182, 727, 1160
BbvI GCAGC 3 cut(s) 409, 451, 652
BccI CCATC 9 cut(s) 61, 143, 301, 322, 400, 466, 623, 1273, 1342
BciT130I CCWGG 5 cut(s) 95, 224, 1058, 1153, 1207
BciVI GTATCC 1 cut(s) 1144
BclI TGATCA 1 cut(s) 1078
BcnI CCSGG 2 cut(s) 80, 461
BcoDI GTCTC 2 cut(s) 933, 1113
BcuI ACTAGT 1 cut(s) 1360
BfaI CTAG 4 cut(s) 144, 585, 695, 1361
BfmI CTRYAG 1 cut(s) 1089
BfrI CTTAAG 1 cut(s) 113
BfuAI ACCTGC 1 cut(s) 325
BfuI GTATCC 1 cut(s) 1144
BisI GCNGC 3 cut(s) 423, 465, 666
BlsI GCNGC 3 cut(s) 424, 466, 667
Bme1390I CCNGG 7 cut(s) 80, 95, 224, 461, 1058, 1153, 1207
Bme18I GGWCC 4 cut(s) 14, 531, 872, 1287
BmgT120I GGNCC 6 cut(s) 14, 226, 457, 531, 872, 1287
BmiI GGNNCC 3 cut(s) 459, 562, 873
BmrFI CCNGG 7 cut(s) 80, 95, 224, 461, 1058, 1153, 1207
BmsI GCATC 4 cut(s) 16, 129, 951, 1250
BpiI GAAGAC 1 cut(s) 595
BpuEI CTTGAG 1 cut(s) 344
BpuMI CCSGG 2 cut(s) 80, 461
BsaBI GATNNNNATC 1 cut(s) 941
BsaJI CCNNGG 3 cut(s) 223, 459, 1338
BsaXI ACNNNNNCTCC 2 cut(s) 360, 390
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 521, 1339, 1340
Bse1I ACTGG 1 cut(s) 1051
Bse3DI GCAATG 3 cut(s) 820, 990, 1071
Bse8I GATNNNNATC 1 cut(s) 941
BseBI CCWGG 5 cut(s) 95, 224, 1058, 1153, 1207
BseDI CCNNGG 3 cut(s) 223, 459, 1338
BseGI GGATG 5 cut(s) 477, 493, 808, 907, 1334
BseJI GATNNNNATC 1 cut(s) 941
BseLI CCNNNNNNNGG 4 cut(s) 79, 521, 1339, 1340
BseMI GCAATG 3 cut(s) 820, 990, 1071
BseMII CTCAG 1 cut(s) 786
BseNI ACTGG 1 cut(s) 1051
BseXI GCAGC 3 cut(s) 409, 451, 652
BsgI GTGCAG 1 cut(s) 450
BshFI GGCC 5 cut(s) 47, 228, 458, 476, 1056
BsiHKAI GWGCWC 3 cut(s) 182, 727, 1160
BsiSI CCGG 2 cut(s) 80, 461
BslI CCNNNNNNNGG 4 cut(s) 79, 521, 1339, 1340
BsmAI GTCTC 2 cut(s) 933, 1113
BsmI GAATGC 2 cut(s) 451, 586
BsnI GGCC 5 cut(s) 47, 228, 458, 476, 1056
Bsp1286I GDGCHC 4 cut(s) 182, 727, 1160, 1265
Bsp143I GATC 4 cut(s) 75, 84, 1036, 1078
BspANI GGCC 5 cut(s) 47, 228, 458, 476, 1056
BspCNI CTCAG 1 cut(s) 787
BspLI GGNNCC 3 cut(s) 459, 562, 873
BspMI ACCTGC 1 cut(s) 325
BspPI GGATC 1 cut(s) 70
BspTI CTTAAG 1 cut(s) 113
BsrDI GCAATG 3 cut(s) 820, 990, 1071
BsrI ACTGG 1 cut(s) 1051
BssECI CCNNGG 3 cut(s) 223, 459, 1338
BssMI GATC 4 cut(s) 75, 84, 1036, 1078
BssT1I CCWWGG 1 cut(s) 1338
Bst2UI CCWGG 5 cut(s) 95, 224, 1058, 1153, 1207
Bst4CI ACNGT 4 cut(s) 128, 253, 302, 757
BstAFI CTTAAG 1 cut(s) 113
BstDEI CTNAG 1 cut(s) 795
BstENI CCTNNNNNAGG 1 cut(s) 519
BstF5I GGATG 5 cut(s) 477, 493, 808, 907, 1334
BstHHI GCGC 1 cut(s) 322
BstKTI GATC 4 cut(s) 78, 87, 1039, 1081
BstMAI GTCTC 2 cut(s) 933, 1113
BstMBI GATC 4 cut(s) 75, 84, 1036, 1078
BstMWI GCNNNNNNNGC 3 cut(s) 455, 464, 473
BstNI CCWGG 5 cut(s) 95, 224, 1058, 1153, 1207
BstSCI CCNGG 7 cut(s) 78, 93, 222, 459, 1056, 1151, 1205
BstSFI CTRYAG 1 cut(s) 1089
BstV1I GCAGC 3 cut(s) 409, 451, 652
BstV2I GAAGAC 1 cut(s) 595
BsuI GTATCC 1 cut(s) 1144
BsuRI GGCC 5 cut(s) 47, 228, 458, 476, 1056
BtgZI GCGATG 1 cut(s) 39
BtsCI GGATG 5 cut(s) 477, 493, 808, 907, 1334
BtsIMutI CAGTG 1 cut(s) 249
BveI ACCTGC 1 cut(s) 325
CaiI CAGNNNCTG 1 cut(s) 223
CfoI GCGC 1 cut(s) 322
Cfr13I GGNCC 6 cut(s) 14, 226, 457, 531, 872, 1287
Csp6I GTAC 3 cut(s) 570, 758, 1294
CviAII CATG 6 cut(s) 437, 478, 565, 878, 1284, 1291
CviQI GTAC 3 cut(s) 570, 758, 1294
DdeI CTNAG 1 cut(s) 795
DpnI GATC 4 cut(s) 77, 86, 1038, 1080
DpnII GATC 4 cut(s) 75, 84, 1036, 1078
EaeI YGGCCR 3 cut(s) 45, 474, 1054
Ecl136II GAGCTC 2 cut(s) 725, 1158
Eco130I CCWWGG 1 cut(s) 1338
Eco24I GRGCYC 3 cut(s) 727, 1160, 1265
Eco47I GGWCC 4 cut(s) 14, 531, 872, 1287
Eco53kI GAGCTC 2 cut(s) 725, 1158
Eco57I CTGAAG 2 cut(s) 1206, 1239
EcoICRI GAGCTC 2 cut(s) 725, 1158
EcoNI CCTNNNNNAGG 1 cut(s) 519
EcoO109I RGGNCCY 1 cut(s) 872
EcoRI GAATTC 1 cut(s) 790
EcoRII CCWGG 5 cut(s) 93, 222, 1056, 1151, 1205
EcoT14I CCWWGG 1 cut(s) 1338
EcoT22I ATGCAT 1 cut(s) 438
EcoT38I GRGCYC 3 cut(s) 727, 1160, 1265
ErhI CCWWGG 1 cut(s) 1338
FaeI CATG 6 cut(s) 440, 481, 568, 881, 1287, 1294
FatI CATG 6 cut(s) 436, 477, 564, 877, 1283, 1290
FbaI TGATCA 1 cut(s) 1078
FblI GTMKAC 2 cut(s) 102, 1142
Fnu4HI GCNGC 3 cut(s) 423, 465, 666
FokI GGATG 5 cut(s) 480, 484, 815, 914, 1321
FriOI GRGCYC 3 cut(s) 727, 1160, 1265
Fsp4HI GCNGC 3 cut(s) 423, 465, 666
FspBI CTAG 4 cut(s) 144, 585, 695, 1361
GlaI GCGC 1 cut(s) 321
GluI GCNGC 3 cut(s) 423, 465, 666
HaeIII GGCC 5 cut(s) 47, 228, 458, 476, 1056
HapII CCGG 2 cut(s) 80, 461
HhaI GCGC 1 cut(s) 322
Hin1II CATG 6 cut(s) 440, 481, 568, 881, 1287, 1294
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HincII GTYRAC 3 cut(s) 103, 618, 883
HindII GTYRAC 3 cut(s) 103, 618, 883
HindIII AAGCTT 2 cut(s) 8, 822
HinfI GANTC 6 cut(s) 65, 190, 511, 1001, 1214, 1305
HpaI GTTAAC 2 cut(s) 618, 883
HpaII CCGG 2 cut(s) 80, 461
HphI GGTGA 4 cut(s) 306, 373, 421, 1355
Hpy166II GTNNAC 5 cut(s) 103, 138, 618, 883, 1143
Hpy188I TCNGA 5 cut(s) 219, 796, 947, 1219, 1300
Hpy188III TCNNGA 4 cut(s) 194, 242, 833, 1175
Hpy8I GTNNAC 5 cut(s) 103, 138, 618, 883, 1143
Hpy99I CGWCG 2 cut(s) 92, 104
HpyAV CCTTC 3 cut(s) 480, 694, 1214
HpyCH4III ACNGT 4 cut(s) 128, 253, 302, 757
HpyCH4IV ACGT 1 cut(s) 1145
HpyCH4V TGCA 5 cut(s) 436, 449, 467, 668, 1043
HpyF10VI GCNNNNNNNGC 3 cut(s) 455, 464, 473
HpyF3I CTNAG 1 cut(s) 795
HpySE526I ACGT 1 cut(s) 1145
Hsp92II CATG 6 cut(s) 440, 481, 568, 881, 1287, 1294
HspAI GCGC 1 cut(s) 320
Ksp22I TGATCA 1 cut(s) 1078
KspAI GTTAAC 2 cut(s) 618, 883
Kzo9I GATC 4 cut(s) 75, 84, 1036, 1078
LmnI GCTCC 3 cut(s) 722, 1155, 1280
Lsp1109I GCAGC 3 cut(s) 409, 451, 652
LweI GCATC 4 cut(s) 16, 129, 951, 1250
MaeI CTAG 4 cut(s) 144, 585, 695, 1361
MaeII ACGT 1 cut(s) 1145
MaeIII GTNAC 4 cut(s) 409, 547, 916, 980
MalI GATC 4 cut(s) 77, 86, 1038, 1080
MboI GATC 4 cut(s) 75, 84, 1036, 1078
MboII GAAGA 4 cut(s) 595, 638, 830, 960
MfeI CAATTG 2 cut(s) 526, 858
MhlI GDGCHC 4 cut(s) 182, 727, 1160, 1265
MlsI TGGCCA 3 cut(s) 47, 476, 1056
MluCI AATT 9 cut(s) 185, 213, 429, 526, 639, 790, 842, 858, 1061
MluNI TGGCCA 3 cut(s) 47, 476, 1056
MlyI GAGTC 3 cut(s) 74, 199, 1010
MmeI TCCRAC 1 cut(s) 1096
Mox20I TGGCCA 3 cut(s) 47, 476, 1056
Mph1103I ATGCAT 1 cut(s) 438
MroXI GAANNNNTTC 1 cut(s) 687
MscI TGGCCA 3 cut(s) 47, 476, 1056
MseI TTAA 9 cut(s) 114, 255, 336, 617, 657, 782, 882, 1110, 1370
Msp20I TGGCCA 3 cut(s) 47, 476, 1056
MspA1I CMGCKG 1 cut(s) 422
MspCI CTTAAG 1 cut(s) 113
MspI CCGG 2 cut(s) 80, 461
MspR9I CCNGG 7 cut(s) 80, 95, 224, 461, 1058, 1153, 1207
MunI CAATTG 2 cut(s) 526, 858
Mva1269I GAATGC 2 cut(s) 451, 586
MvaI CCWGG 5 cut(s) 95, 224, 1058, 1153, 1207
MwoI GCNNNNNNNGC 3 cut(s) 455, 464, 473
NciI CCSGG 2 cut(s) 80, 461
NdeII GATC 4 cut(s) 75, 84, 1036, 1078
NlaIII CATG 6 cut(s) 440, 481, 568, 881, 1287, 1294
NlaIV GGNNCC 3 cut(s) 459, 562, 873
NmuCI GTSAC 2 cut(s) 409, 980
NsiI ATGCAT 1 cut(s) 438
PaqCI CACCTGC 1 cut(s) 325
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 2 cut(s) 451, 586
PdmI GAANNNNTTC 1 cut(s) 687
PfeI GAWTC 3 cut(s) 511, 1214, 1305
PfoI TCCNGGA 2 cut(s) 78, 1151
PkrI GCNGC 3 cut(s) 424, 466, 667
PleI GAGTC 3 cut(s) 73, 198, 1009
PpsI GAGTC 3 cut(s) 73, 198, 1009
PpuMI RGGWCCY 1 cut(s) 872
Psp124BI GAGCTC 2 cut(s) 727, 1160
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 5 cut(s) 93, 222, 1056, 1151, 1205
PspGI CCWGG 5 cut(s) 93, 222, 1056, 1151, 1205
PspN4I GGNNCC 3 cut(s) 459, 562, 873
PspPI GGNCC 6 cut(s) 14, 226, 457, 531, 872, 1287
PspPPI RGGWCCY 1 cut(s) 872
PsrI GAACNNNNNNTAC 3 cut(s) 553, 585, 1347
PstNI CAGNNNCTG 1 cut(s) 223
PvuII CAGCTG 1 cut(s) 422
RsaI GTAC 3 cut(s) 571, 759, 1295
RsaNI GTAC 3 cut(s) 570, 758, 1294
SacI GAGCTC 2 cut(s) 727, 1160
SalI GTCGAC 1 cut(s) 101
SaqAI TTAA 9 cut(s) 114, 255, 336, 617, 657, 782, 882, 1110, 1370
SatI GCNGC 3 cut(s) 423, 465, 666
Sau3AI GATC 4 cut(s) 75, 84, 1036, 1078
Sau96I GGNCC 6 cut(s) 14, 226, 457, 531, 872, 1287
SchI GAGTC 3 cut(s) 74, 199, 1010
ScrFI CCNGG 7 cut(s) 80, 95, 224, 461, 1058, 1153, 1207
SduI GDGCHC 4 cut(s) 182, 727, 1160, 1265
SfaNI GCATC 4 cut(s) 16, 129, 951, 1250
SfcI CTRYAG 1 cut(s) 1089
SinI GGWCC 4 cut(s) 14, 531, 872, 1287
SmlI CTYRAG 2 cut(s) 113, 323
SmoI CTYRAG 2 cut(s) 113, 323
SpeI ACTAGT 1 cut(s) 1360
Sse9I AATT 9 cut(s) 185, 213, 429, 526, 639, 790, 842, 858, 1061
SspI AATATT 1 cut(s) 1164
SspMI CTAG 4 cut(s) 144, 585, 695, 1361
SstI GAGCTC 2 cut(s) 727, 1160
StyD4I CCNGG 7 cut(s) 78, 93, 222, 459, 1056, 1151, 1205
StyI CCWWGG 1 cut(s) 1338
TaaI ACNGT 4 cut(s) 128, 253, 302, 757
TaiI ACGT 1 cut(s) 1148
TaqI TCGA 6 cut(s) 35, 102, 235, 578, 643, 1004
TasI AATT 9 cut(s) 185, 213, 429, 526, 639, 790, 842, 858, 1061
TatI WGTACW 2 cut(s) 757, 1293
TfiI GAWTC 3 cut(s) 511, 1214, 1305
Tru1I TTAA 9 cut(s) 114, 255, 336, 617, 657, 782, 882, 1110, 1370
Tru9I TTAA 9 cut(s) 114, 255, 336, 617, 657, 782, 882, 1110, 1370
TscAI CASTG 1 cut(s) 256
TseFI GTSAC 2 cut(s) 409, 980
TseI GCWGC 3 cut(s) 422, 464, 665
Tsp45I GTSAC 2 cut(s) 409, 980
TspDTI ATGAA 7 cut(s) 482, 639, 675, 696, 786, 819, 831
TspGWI ACGGA 1 cut(s) 484
TspRI CASTG 1 cut(s) 256
Vha464I CTTAAG 1 cut(s) 113
VpaK11BI GGWCC 4 cut(s) 14, 531, 872, 1287
XagI CCTNNNNNAGG 1 cut(s) 519
XapI RAATTY 4 cut(s) 213, 639, 790, 842
XcmI CCANNNNNNNNNTGG 1 cut(s) 403
XmiI GTMKAC 2 cut(s) 102, 1142
XmnI GAANNNNTTC 1 cut(s) 687
XspI CTAG 4 cut(s) 144, 585, 695, 1361
Zsp2I ATGCAT 1 cut(s) 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.