Rh7BG056500

Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0009976
Physical Location & Seq
Forward (+)
3766616 .. 3770372
3757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG056500.1

Sequence Viewer

Length: 1209 bp
ATGGCGAAGCTTGGACCAACCCCAGATGCGATTTCGACCGTCTTGGCCAACCGATCGCCGGACGGGTCCACCCCGATCCCGGAGATCGTCGTCCAGGTCGTCGATCTCAATCTTAAGGGCAACCGTTATATGTTTACTGCTAGTGATGGAAAGATGAGGCTAAAGACGATGTTGAACACAACTATGAGTTCTGATGTTATTTCTGGGAAAATTCAGAACCTGGGCCTCATTCGTGTTCTTGATTACACTGTTAATGACATTCCAAACAAGCCCGAAAAATATATGATTGTAACAAAATGTGAGATGGTTTCACCTGCGCTTGAGATGGAGATTAAAAGTGAGGTCAGTAAAGATGAGGTGAAAGGAGAACAGGTTGGGATTATTTTGAAGCCCAAGCAAGAGATGGTGACTAAATCAGCTGCTCAAATTATGCATGAGCAGAATGCAAATATGGCCCCGGCTGCACGAATGGCCATGACCAGAAGGGTTCATCCTATTGTTTCCTTGAATCCTTATCAAGGCAATTGGACCATAAAGGTTCGTGTTACAAACAAGGGAACCATGCATACTTACTCGAATGCTAGAGGTCAAGGCTGTGTCTTCAATGTGGAGTTAACAGATGAAGATGGAACTGAAATTCGAGCTACAATGTTTAATGAAGCTGCGAAGAAGTTCTATGAAAAGTTTCAACTAGGGAAGGTCTATTATGTTTCAAAGGGAGCTCTAAAGGTTGCTAACAAGAAGTTTAGCACAGTAAAAAATGATTATGAAATGACCTTAAATGAGAATTCTGAGGTGGATGAAGTCAGCAATGAAGAAGTTTTTGTTCCTGAAACAAAATTTGATTTTATCCCAATTGATATGTTGGGTCCCCATGTTAACAGCAAGGTGCTTGTGGATGTTATTGGAGTTGTTACAAATGTGTCTCCTACAATGAGCATCAGAAGAAAAAGCAACAATGAGAATATCCCAAAGCGTGACATTACCATTGCTGATGAGTCGAAAAAAGTGGTTGTGGTTTCTTTATGGAATGATCTTGCAACTGGTGTTGGCCAGGAATTGCTGGACATTGCTGATCAATCTCCTGTAGTTGCTATCAAATCCCTTAAAGTTGGAGACTATCAAGGTGTATCCTTGTCTACGGTTTCCAGGAGCTCAATATTTGTAAATCCAGATTTACCTGAAGCAAAGAGGTTGAAATCCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000278 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005662 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006278 GO:0006279 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007004 GO:0007049 GO:0007063 GO:0007088 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010224 GO:0010556 GO:0010557 GO:0010564 GO:0010604 GO:0010638 GO:0010639 GO:0010833 GO:0010948 GO:0016043 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022402 GO:0022414 GO:0030894 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032200 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032392 GO:0032508 GO:0032879 GO:0032880 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0035861 GO:0042162 GO:0042592 GO:0043047 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044786 GO:0045786 GO:0045839 GO:0045875 GO:0045930 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051098 GO:0051101 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051276 GO:0051321 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0060249 GO:0060255 GO:0060341 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070034 GO:0071103 GO:0071704 GO:0071840 GO:0071897 GO:0071922 GO:0071923 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0098687 GO:0098847 GO:0106111 GO:0106112 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902969 GO:1903046 GO:1903047 GO:1903827 GO:1903828 GO:1904356 GO:1904358 GO:1905405 GO:1905412 GO:1905634 GO:2000112 GO:2000278 GO:2000573 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03030 ko03420 ko03430 ko03440 ko03460 map03030 map03420 map03430 map03440 map03460
Pfam Domains
Protein Families
REPA_OB_2 Rep-A_N Rep_fac-A_C tRNA_anti-codon

Protein Analysis

402

Amino Acids

44.57

Weight (kDa)

8.25

Isoelectric Point (pI)

33.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rep-A_N PF04057 7 - 104 8.7e-22 Replication factor-A protein 1, N-terminal domain
DUF223 PF02721 164 - 267 2.5e-08 Domain of unknown function DUF223
tRNA_anti-codon PF01336 176 - 261 1.3e-09 OB-fold nucleic acid binding domain
REPA_OB_2 PF16900 293 - 390 1.4e-23 Replication protein A OB domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 322
Acc36I ACCTGC 1 cut(s) 322
AccI GTMKAC 1 cut(s) 1139
AclWI GGATC 1 cut(s) 70
AcoI YGGCCR 3 cut(s) 45, 471, 1051
AcsI RAATTY 4 cut(s) 210, 636, 787, 839
AcuI CTGAAG 1 cut(s) 1203
AfiI CCNNNNNNNGG 3 cut(s) 58, 79, 518
AflII CTTAAG 1 cut(s) 113
AgsI TTSAA 7 cut(s) 175, 388, 508, 604, 689, 714, 1198
AjnI CCWGG 5 cut(s) 93, 219, 1053, 1148, 1202
AluBI AGCT 6 cut(s) 10, 419, 644, 662, 722, 1155
AluI AGCT 6 cut(s) 10, 419, 644, 662, 722, 1155
Alw21I GWGCWC 2 cut(s) 724, 1157
Alw26I GTCTC 2 cut(s) 930, 1110
AlwI GGATC 1 cut(s) 70
AlwNI CAGNNNCTG 1 cut(s) 220
AoxI GGCC 5 cut(s) 45, 223, 453, 471, 1051
ApeKI GCWGC 3 cut(s) 419, 461, 662
ApoI RAATTY 4 cut(s) 210, 636, 787, 839
Asp700I GAANNNNTTC 2 cut(s) 671, 684
AspLEI GCGC 1 cut(s) 319
AspS9I GGNCC 6 cut(s) 14, 66, 223, 454, 528, 869
AsuC2I CCSGG 2 cut(s) 80, 458
AsuHPI GGTGA 3 cut(s) 303, 370, 418
AvaII GGWCC 4 cut(s) 14, 66, 528, 869
BalI TGGCCA 3 cut(s) 47, 473, 1053
BanII GRGCYC 2 cut(s) 724, 1157
BbsI GAAGAC 1 cut(s) 592
Bbv12I GWGCWC 2 cut(s) 724, 1157
BbvI GCAGC 3 cut(s) 406, 448, 649
BccI CCATC 5 cut(s) 140, 298, 319, 397, 620
BciT130I CCWGG 5 cut(s) 95, 221, 1055, 1150, 1204
BciVI GTATCC 1 cut(s) 1141
BclI TGATCA 1 cut(s) 1075
BcnI CCSGG 2 cut(s) 80, 458
BcoDI GTCTC 2 cut(s) 930, 1110
BfaI CTAG 3 cut(s) 141, 582, 692
BfmI CTRYAG 1 cut(s) 1086
BfrI CTTAAG 1 cut(s) 113
BfuAI ACCTGC 1 cut(s) 322
BfuI GTATCC 1 cut(s) 1141
BisI GCNGC 3 cut(s) 420, 462, 663
BlsI GCNGC 3 cut(s) 421, 463, 664
Bme1390I CCNGG 7 cut(s) 80, 95, 221, 458, 1055, 1150, 1204
Bme18I GGWCC 4 cut(s) 14, 66, 528, 869
BmgT120I GGNCC 6 cut(s) 14, 66, 223, 454, 528, 869
BmiI GGNNCC 5 cut(s) 67, 456, 559, 870, 871
BmrFI CCNGG 7 cut(s) 80, 95, 221, 458, 1055, 1150, 1204
BmsI GCATC 2 cut(s) 16, 948
BpiI GAAGAC 1 cut(s) 592
BpuEI CTTGAG 1 cut(s) 341
BpuMI CCSGG 2 cut(s) 80, 458
BsaBI GATNNNNATC 1 cut(s) 108
BsaJI CCNNGG 2 cut(s) 220, 456
BsaXI ACNNNNNCTCC 2 cut(s) 357, 387
Bsc4I CCNNNNNNNGG 3 cut(s) 58, 79, 518
Bse1I ACTGG 1 cut(s) 1048
Bse3DI GCAATG 3 cut(s) 817, 987, 1068
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 5 cut(s) 95, 221, 1055, 1150, 1204
BseDI CCNNGG 2 cut(s) 220, 456
BseGI GGATG 3 cut(s) 490, 805, 904
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 3 cut(s) 58, 79, 518
BseMI GCAATG 3 cut(s) 817, 987, 1068
BseMII CTCAG 1 cut(s) 783
BseNI ACTGG 1 cut(s) 1048
BseXI GCAGC 3 cut(s) 406, 448, 649
BsgI GTGCAG 1 cut(s) 447
Bsh1285I CGRYCG 2 cut(s) 39, 56
BshFI GGCC 5 cut(s) 47, 225, 455, 473, 1053
BsiEI CGRYCG 2 cut(s) 39, 56
BsiHKAI GWGCWC 2 cut(s) 724, 1157
BsiSI CCGG 3 cut(s) 59, 80, 458
BslFI GGGAC 1 cut(s) 855
BslI CCNNNNNNNGG 3 cut(s) 58, 79, 518
BsmAI GTCTC 2 cut(s) 930, 1110
BsmFI GGGAC 1 cut(s) 855
BsmI GAATGC 2 cut(s) 448, 583
BsnI GGCC 5 cut(s) 47, 225, 455, 473, 1053
Bsp1286I GDGCHC 2 cut(s) 724, 1157
Bsp143I GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
BspANI GGCC 5 cut(s) 47, 225, 455, 473, 1053
BspCNI CTCAG 1 cut(s) 784
BspLI GGNNCC 5 cut(s) 67, 456, 559, 870, 871
BspMI ACCTGC 1 cut(s) 322
BspPI GGATC 1 cut(s) 70
BspTI CTTAAG 1 cut(s) 113
BsrDI GCAATG 3 cut(s) 817, 987, 1068
BsrI ACTGG 1 cut(s) 1048
BssECI CCNNGG 2 cut(s) 220, 456
BssMI GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
Bst2UI CCWGG 5 cut(s) 95, 221, 1055, 1150, 1204
Bst4CI ACNGT 5 cut(s) 40, 125, 250, 754, 1144
BstAFI CTTAAG 1 cut(s) 113
BstDEI CTNAG 1 cut(s) 792
BstENI CCTNNNNNAGG 1 cut(s) 516
BstF5I GGATG 3 cut(s) 490, 805, 904
BstHHI GCGC 1 cut(s) 319
BstKTI GATC 6 cut(s) 56, 78, 87, 106, 1036, 1078
BstMAI GTCTC 2 cut(s) 930, 1110
BstMBI GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
BstMCI CGRYCG 2 cut(s) 39, 56
BstMWI GCNNNNNNNGC 3 cut(s) 452, 461, 470
BstNI CCWGG 5 cut(s) 95, 221, 1055, 1150, 1204
BstSCI CCNGG 7 cut(s) 78, 93, 219, 456, 1053, 1148, 1202
BstSFI CTRYAG 1 cut(s) 1086
BstV1I GCAGC 3 cut(s) 406, 448, 649
BstV2I GAAGAC 1 cut(s) 592
BsuI GTATCC 1 cut(s) 1141
BsuRI GGCC 5 cut(s) 47, 225, 455, 473, 1053
BtsCI GGATG 3 cut(s) 490, 805, 904
BtsIMutI CAGTG 1 cut(s) 246
BveI ACCTGC 1 cut(s) 322
CaiI CAGNNNCTG 1 cut(s) 220
CfoI GCGC 1 cut(s) 319
Cfr13I GGNCC 6 cut(s) 14, 66, 223, 454, 528, 869
CviAII CATG 4 cut(s) 434, 475, 562, 875
DdeI CTNAG 1 cut(s) 792
DpnI GATC 6 cut(s) 55, 77, 86, 105, 1035, 1077
DpnII GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
EaeI YGGCCR 3 cut(s) 45, 471, 1051
Ecl136II GAGCTC 2 cut(s) 722, 1155
Eco24I GRGCYC 2 cut(s) 724, 1157
Eco47I GGWCC 4 cut(s) 14, 66, 528, 869
Eco53kI GAGCTC 2 cut(s) 722, 1155
Eco57I CTGAAG 1 cut(s) 1203
EcoICRI GAGCTC 2 cut(s) 722, 1155
EcoNI CCTNNNNNAGG 1 cut(s) 516
EcoO109I RGGNCCY 1 cut(s) 869
EcoRI GAATTC 1 cut(s) 787
EcoRII CCWGG 5 cut(s) 93, 219, 1053, 1148, 1202
EcoT22I ATGCAT 2 cut(s) 435, 567
EcoT38I GRGCYC 2 cut(s) 724, 1157
FaeI CATG 4 cut(s) 437, 478, 565, 878
FaqI GGGAC 1 cut(s) 855
FatI CATG 4 cut(s) 433, 474, 561, 874
FbaI TGATCA 1 cut(s) 1075
FblI GTMKAC 1 cut(s) 1139
Fnu4HI GCNGC 3 cut(s) 420, 462, 663
FokI GGATG 3 cut(s) 477, 812, 911
FriOI GRGCYC 2 cut(s) 724, 1157
Fsp4HI GCNGC 3 cut(s) 420, 462, 663
FspBI CTAG 3 cut(s) 141, 582, 692
GlaI GCGC 1 cut(s) 318
GluI GCNGC 3 cut(s) 420, 462, 663
HaeIII GGCC 5 cut(s) 47, 225, 455, 473, 1053
HapII CCGG 3 cut(s) 59, 80, 458
HhaI GCGC 1 cut(s) 319
Hin1II CATG 4 cut(s) 437, 478, 565, 878
Hin6I GCGC 1 cut(s) 317
HinP1I GCGC 1 cut(s) 317
HincII GTYRAC 2 cut(s) 615, 880
HindII GTYRAC 2 cut(s) 615, 880
HindIII AAGCTT 1 cut(s) 8
HinfI GANTC 2 cut(s) 508, 998
HpaI GTTAAC 2 cut(s) 615, 880
HpaII CCGG 3 cut(s) 59, 80, 458
HphI GGTGA 3 cut(s) 303, 370, 418
Hpy166II GTNNAC 5 cut(s) 69, 135, 615, 880, 1140
Hpy188I TCNGA 4 cut(s) 193, 216, 793, 944
Hpy188III TCNNGA 3 cut(s) 239, 830, 1172
Hpy8I GTNNAC 5 cut(s) 69, 135, 615, 880, 1140
Hpy99I CGWCG 2 cut(s) 92, 104
HpyAV CCTTC 2 cut(s) 477, 691
HpyCH4III ACNGT 5 cut(s) 40, 125, 250, 754, 1144
HpyCH4V TGCA 5 cut(s) 433, 446, 464, 565, 1040
HpyF10VI GCNNNNNNNGC 3 cut(s) 452, 461, 470
HpyF3I CTNAG 1 cut(s) 792
Hsp92II CATG 4 cut(s) 437, 478, 565, 878
HspAI GCGC 1 cut(s) 317
KflI GGGWCCC 1 cut(s) 869
Ksp22I TGATCA 1 cut(s) 1075
KspAI GTTAAC 2 cut(s) 615, 880
Kzo9I GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
LmnI GCTCC 2 cut(s) 719, 1152
Lsp1109I GCAGC 3 cut(s) 406, 448, 649
LweI GCATC 2 cut(s) 16, 948
MaeI CTAG 3 cut(s) 141, 582, 692
MaeIII GTNAC 5 cut(s) 289, 406, 544, 913, 977
MalI GATC 6 cut(s) 55, 77, 86, 105, 1035, 1077
MboI GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
MboII GAAGA 5 cut(s) 592, 635, 679, 827, 957
MfeI CAATTG 2 cut(s) 523, 855
MhlI GDGCHC 2 cut(s) 724, 1157
MlsI TGGCCA 3 cut(s) 47, 473, 1053
MluCI AATT 8 cut(s) 210, 426, 523, 636, 787, 839, 855, 1058
MluNI TGGCCA 3 cut(s) 47, 473, 1053
MlyI GAGTC 1 cut(s) 1007
MmeI TCCRAC 1 cut(s) 1093
MnlI CCTC 7 cut(s) 150, 236, 334, 349, 578, 787, 1185
Mox20I TGGCCA 3 cut(s) 47, 473, 1053
Mph1103I ATGCAT 2 cut(s) 435, 567
MroXI GAANNNNTTC 2 cut(s) 671, 684
MscI TGGCCA 3 cut(s) 47, 473, 1053
MseI TTAA 8 cut(s) 114, 252, 333, 614, 654, 779, 879, 1107
MslI CAYNNNNRTG 1 cut(s) 182
Msp20I TGGCCA 3 cut(s) 47, 473, 1053
MspA1I CMGCKG 1 cut(s) 419
MspCI CTTAAG 1 cut(s) 113
MspI CCGG 3 cut(s) 59, 80, 458
MspR9I CCNGG 7 cut(s) 80, 95, 221, 458, 1055, 1150, 1204
MunI CAATTG 2 cut(s) 523, 855
Mva1269I GAATGC 2 cut(s) 448, 583
MvaI CCWGG 5 cut(s) 95, 221, 1055, 1150, 1204
MwoI GCNNNNNNNGC 3 cut(s) 452, 461, 470
NciI CCSGG 2 cut(s) 80, 458
NdeII GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
NlaIII CATG 4 cut(s) 437, 478, 565, 878
NlaIV GGNNCC 5 cut(s) 67, 456, 559, 870, 871
NmuCI GTSAC 2 cut(s) 406, 977
NsiI ATGCAT 2 cut(s) 435, 567
PaqCI CACCTGC 1 cut(s) 322
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 2 cut(s) 448, 583
PdmI GAANNNNTTC 2 cut(s) 671, 684
PfeI GAWTC 1 cut(s) 508
PfoI TCCNGGA 2 cut(s) 78, 1148
PkrI GCNGC 3 cut(s) 421, 463, 664
Ple19I CGATCG 1 cut(s) 56
PleI GAGTC 1 cut(s) 1006
PpsI GAGTC 1 cut(s) 1006
PpuMI RGGWCCY 1 cut(s) 869
Psp124BI GAGCTC 2 cut(s) 724, 1157
Psp5II RGGWCCY 1 cut(s) 869
Psp6I CCWGG 5 cut(s) 93, 219, 1053, 1148, 1202
PspGI CCWGG 5 cut(s) 93, 219, 1053, 1148, 1202
PspN4I GGNNCC 5 cut(s) 67, 456, 559, 870, 871
PspPI GGNCC 6 cut(s) 14, 66, 223, 454, 528, 869
PspPPI RGGWCCY 1 cut(s) 869
PsrI GAACNNNNNNTAC 2 cut(s) 550, 582
PstNI CAGNNNCTG 1 cut(s) 220
PvuI CGATCG 1 cut(s) 56
PvuII CAGCTG 1 cut(s) 419
RseI CAYNNNNRTG 1 cut(s) 182
SacI GAGCTC 2 cut(s) 724, 1157
SaqAI TTAA 8 cut(s) 114, 252, 333, 614, 654, 779, 879, 1107
SatI GCNGC 3 cut(s) 420, 462, 663
Sau3AI GATC 6 cut(s) 53, 75, 84, 103, 1033, 1075
Sau96I GGNCC 6 cut(s) 14, 66, 223, 454, 528, 869
SchI GAGTC 1 cut(s) 1007
ScrFI CCNGG 7 cut(s) 80, 95, 221, 458, 1055, 1150, 1204
SduI GDGCHC 2 cut(s) 724, 1157
SfaNI GCATC 2 cut(s) 16, 948
SfcI CTRYAG 1 cut(s) 1086
SinI GGWCC 4 cut(s) 14, 66, 528, 869
SmiMI CAYNNNNRTG 1 cut(s) 182
SmlI CTYRAG 2 cut(s) 113, 320
SmoI CTYRAG 2 cut(s) 113, 320
Sse9I AATT 8 cut(s) 210, 426, 523, 636, 787, 839, 855, 1058
SspI AATATT 1 cut(s) 1161
SspMI CTAG 3 cut(s) 141, 582, 692
SstI GAGCTC 2 cut(s) 724, 1157
StyD4I CCNGG 7 cut(s) 78, 93, 219, 456, 1053, 1148, 1202
TaaI ACNGT 5 cut(s) 40, 125, 250, 754, 1144
TaqI TCGA 5 cut(s) 35, 102, 575, 640, 1001
TasI AATT 8 cut(s) 210, 426, 523, 636, 787, 839, 855, 1058
TfiI GAWTC 1 cut(s) 508
Tru1I TTAA 8 cut(s) 114, 252, 333, 614, 654, 779, 879, 1107
Tru9I TTAA 8 cut(s) 114, 252, 333, 614, 654, 779, 879, 1107
TscAI CASTG 1 cut(s) 253
TseFI GTSAC 2 cut(s) 406, 977
TseI GCWGC 3 cut(s) 419, 461, 662
Tsp45I GTSAC 2 cut(s) 406, 977
TspDTI ATGAA 7 cut(s) 479, 636, 672, 693, 783, 816, 828
TspRI CASTG 1 cut(s) 253
Vha464I CTTAAG 1 cut(s) 113
VpaK11BI GGWCC 4 cut(s) 14, 66, 528, 869
XagI CCTNNNNNAGG 1 cut(s) 516
XapI RAATTY 4 cut(s) 210, 636, 787, 839
XcmI CCANNNNNNNNNTGG 1 cut(s) 400
XmiI GTMKAC 1 cut(s) 1139
XmnI GAANNNNTTC 2 cut(s) 671, 684
XspI CTAG 3 cut(s) 141, 582, 692
Zsp2I ATGCAT 2 cut(s) 435, 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.