Rh7BG328600

Protein EI24 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0008616
Physical Location & Seq
Reverse (-)
33860514 .. 33869134
8621 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG328600.1

Sequence Viewer

Length: 726 bp
ATGGAAGCTCTGAGCGCAAAATCAAAGCTAGCCGCGGTGCTTTGGCTTGAGGGCTTCAGACAGGCCTGTTGCCTTCACCGTGTGCTGATTCTCTGCCACAGGTCCAGAAAGCTTCTGATACGCACAGGACAGTGTTTTCTGTTGAATGGTTTCATTTTCTTAGGAAGCATAATTATCCTTAACTCGTTCATCATCCCAGCTCTATACTGGATATTGCCTGATATGTGTCCAGAATCTAGTTCTCAAGAATTCTGCTCATTTGCTGTCATTTGGGAATTTTATTCCTTCTTACGTCACGGACTCATACAAATCTTTTATGTAACTTGGTTATACCCATTATATGTATTCAGCTTTATCCTGAGCAACATCTGGTACAATGATATTGCCAAGTATGGATTTTCTGCAATGGGGAGACCTGTGATTAACAAATTGGATCCCGTCAGGCAAAGTGATGTATCAACCTTACAAAATGCAGCTGGCATGGAAAGACGAACTGACCTAGGACGGGTCATGATTGGAATAGGAGAGCAGGTTTATTCAGTGCTTCTTTTGAGCTGTTTCTTCTTAGAGGTATATGTGACAGGATTTATACCATATGTGGGCAAGGCATTAAATTTTCTGCTTCTTTCCTGGATGTATGCCTACTACTGTTTTGAGTATGTGGTACATGTAACTTTCTTGGTTAATGTGTTCCAGTTGCTAACTTCCTACGTGCGTGTGCTCTAA

Protein Analysis

241

Amino Acids

27.91

Weight (kDa)

8.59

Isoelectric Point (pI)

43.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EI24 PF07264 24 - 221 2e-18 Sulfate transporter CysZ/Etoposide-induced protein 2.4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 520
AccII CGCG 1 cut(s) 35
AciI CCGC 2 cut(s) 33, 35
AclWI GGATC 2 cut(s) 428, 441
AcsI RAATTY 3 cut(s) 248, 275, 613
AcuI CTGAAG 1 cut(s) 40
AdeI CACNNNGTG 1 cut(s) 82
AfaI GTAC 2 cut(s) 374, 666
AfiI CCNNNNNNNGG 2 cut(s) 505, 599
AflIII ACRYGT 1 cut(s) 667
AgsI TTSAA 1 cut(s) 145
AjnI CCWGG 1 cut(s) 629
AluBI AGCT 7 cut(s) 8, 28, 112, 200, 351, 476, 555
AluI AGCT 7 cut(s) 8, 28, 112, 200, 351, 476, 555
Alw21I GWGCWC 1 cut(s) 723
Alw26I GTCTC 1 cut(s) 406
AlwI GGATC 2 cut(s) 428, 441
AoxI GGCC 1 cut(s) 63
ApeKI GCWGC 1 cut(s) 473
ApoI RAATTY 3 cut(s) 248, 275, 613
Asp700I GAANNNNTTC 1 cut(s) 149
AspA2I CCTAGG 1 cut(s) 499
AspLEI GCGC 1 cut(s) 17
AspS9I GGNCC 1 cut(s) 102
AsuHPI GGTGA 1 cut(s) 68
AsuNHI GCTAGC 1 cut(s) 28
AvaII GGWCC 1 cut(s) 102
AvrII CCTAGG 1 cut(s) 499
BamHI GGATCC 1 cut(s) 433
Bbv12I GWGCWC 1 cut(s) 723
BbvI GCAGC 1 cut(s) 485
BciT130I CCWGG 1 cut(s) 631
BcoDI GTCTC 1 cut(s) 406
BfaI CTAG 3 cut(s) 29, 237, 500
BfuAI ACCTGC 1 cut(s) 520
BisI GCNGC 2 cut(s) 33, 474
BlnI CCTAGG 1 cut(s) 499
BlsI GCNGC 2 cut(s) 34, 475
Bme1390I CCNGG 1 cut(s) 631
Bme18I GGWCC 1 cut(s) 102
BmgT120I GGNCC 1 cut(s) 102
BmiI GGNNCC 1 cut(s) 435
BmrFI CCNGG 1 cut(s) 631
BmtI GCTAGC 1 cut(s) 32
Bpu10I CCTNAGC 1 cut(s) 359
BpuEI CTTGAG 2 cut(s) 68, 228
BsaAI YACGTR 1 cut(s) 712
BsaI GGTCTC 1 cut(s) 406
BsaJI CCNNGG 2 cut(s) 33, 499
BsaXI ACNNNNNCTCC 2 cut(s) 516, 546
Bsc4I CCNNNNNNNGG 2 cut(s) 505, 599
Bse1I ACTGG 2 cut(s) 212, 694
Bse3DI GCAATG 1 cut(s) 411
BseBI CCWGG 1 cut(s) 631
BseDI CCNNGG 2 cut(s) 33, 499
BseGI GGATG 2 cut(s) 192, 639
BseLI CCNNNNNNNGG 2 cut(s) 505, 599
BseMI GCAATG 1 cut(s) 411
BseMII CTCAG 1 cut(s) 350
BseNI ACTGG 2 cut(s) 212, 694
BseXI GCAGC 1 cut(s) 485
BseYI CCCAGC 1 cut(s) 196
Bsh1236I CGCG 1 cut(s) 35
BshFI GGCC 1 cut(s) 65
BsiHKAI GWGCWC 1 cut(s) 723
BslI CCNNNNNNNGG 2 cut(s) 505, 599
BsmAI GTCTC 1 cut(s) 406
BsnI GGCC 1 cut(s) 65
Bso31I GGTCTC 1 cut(s) 406
Bsp1286I GDGCHC 1 cut(s) 723
Bsp143I GATC 1 cut(s) 433
BspACI CCGC 2 cut(s) 33, 35
BspANI GGCC 1 cut(s) 65
BspCNI CTCAG 1 cut(s) 351
BspFNI CGCG 1 cut(s) 35
BspHI TCATGA 1 cut(s) 510
BspLI GGNNCC 1 cut(s) 435
BspMI ACCTGC 1 cut(s) 520
BspOI GCTAGC 1 cut(s) 32
BspPI GGATC 2 cut(s) 428, 441
BspTNI GGTCTC 1 cut(s) 406
BsrDI GCAATG 1 cut(s) 411
BsrI ACTGG 2 cut(s) 212, 694
BssECI CCNNGG 2 cut(s) 33, 499
BssMI GATC 1 cut(s) 433
BssT1I CCWWGG 1 cut(s) 499
Bst2UI CCWGG 1 cut(s) 631
Bst4CI ACNGT 3 cut(s) 80, 132, 650
BstBAI YACGTR 1 cut(s) 712
BstC8I GCNNGC 2 cut(s) 30, 478
BstDEI CTNAG 4 cut(s) 11, 160, 359, 565
BstDSI CCRYGG 1 cut(s) 33
BstF5I GGATG 2 cut(s) 192, 639
BstFNI CGCG 1 cut(s) 35
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 1 cut(s) 436
BstMAI GTCTC 1 cut(s) 406
BstMBI GATC 1 cut(s) 433
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstNI CCWGG 1 cut(s) 631
BstNSI RCATGY 1 cut(s) 671
BstSCI CCNGG 1 cut(s) 629
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 1 cut(s) 485
BstX2I RGATCY 1 cut(s) 433
BstYI RGATCY 1 cut(s) 433
BsuRI GGCC 1 cut(s) 65
BtgI CCRYGG 1 cut(s) 33
BtsCI GGATG 2 cut(s) 192, 639
BtsIMutI CAGTG 2 cut(s) 137, 546
BveI ACCTGC 1 cut(s) 520
Cac8I GCNNGC 2 cut(s) 30, 478
CciI TCATGA 1 cut(s) 510
CfoI GCGC 1 cut(s) 17
Cfr13I GGNCC 1 cut(s) 102
Cfr42I CCGCGG 1 cut(s) 36
Csp6I GTAC 2 cut(s) 373, 665
CviAII CATG 3 cut(s) 481, 511, 668
CviQI GTAC 2 cut(s) 373, 665
DdeI CTNAG 4 cut(s) 11, 160, 359, 565
DpnI GATC 1 cut(s) 435
DpnII GATC 1 cut(s) 433
DraIII CACNNNGTG 1 cut(s) 82
Eco130I CCWWGG 1 cut(s) 499
Eco147I AGGCCT 1 cut(s) 65
Eco31I GGTCTC 1 cut(s) 406
Eco47I GGWCC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 40
EcoRI GAATTC 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 629
EcoT14I CCWWGG 1 cut(s) 499
ErhI CCWWGG 1 cut(s) 499
FaeI CATG 3 cut(s) 484, 514, 671
FatI CATG 3 cut(s) 480, 510, 667
FauNDI CATATG 1 cut(s) 595
Fnu4HI GCNGC 2 cut(s) 33, 474
FokI GGATG 2 cut(s) 179, 646
Fsp4HI GCNGC 2 cut(s) 33, 474
FspBI CTAG 3 cut(s) 29, 237, 500
GlaI GCGC 1 cut(s) 16
GluI GCNGC 2 cut(s) 33, 474
GsaI CCCAGC 1 cut(s) 200
HaeIII GGCC 1 cut(s) 65
HhaI GCGC 1 cut(s) 17
Hin1II CATG 3 cut(s) 484, 514, 671
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HindIII AAGCTT 1 cut(s) 110
HinfI GANTC 3 cut(s) 88, 233, 300
HphI GGTGA 1 cut(s) 68
Hpy188I TCNGA 3 cut(s) 12, 59, 117
Hpy188III TCNNGA 5 cut(s) 105, 230, 245, 358, 511
HpyAV CCTTC 2 cut(s) 83, 295
HpyCH4III ACNGT 3 cut(s) 80, 132, 650
HpyCH4IV ACGT 2 cut(s) 292, 711
HpyCH4V TGCA 2 cut(s) 404, 473
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpyF3I CTNAG 4 cut(s) 11, 160, 359, 565
HpySE526I ACGT 2 cut(s) 292, 711
Hsp92II CATG 3 cut(s) 484, 514, 671
HspAI GCGC 1 cut(s) 15
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 1 cut(s) 433
Lsp1109I GCAGC 1 cut(s) 485
MaeI CTAG 3 cut(s) 29, 237, 500
MaeII ACGT 2 cut(s) 292, 711
MaeIII GTNAC 4 cut(s) 293, 319, 577, 670
MalI GATC 1 cut(s) 435
MboI GATC 1 cut(s) 433
MboII GAAGA 1 cut(s) 553
MflI RGATCY 1 cut(s) 433
MhlI GDGCHC 1 cut(s) 723
MluCI AATT 5 cut(s) 171, 248, 275, 428, 613
MlyI GAGTC 1 cut(s) 294
MnlI CCTC 2 cut(s) 43, 562
MroXI GAANNNNTTC 1 cut(s) 149
MseI TTAA 4 cut(s) 180, 423, 611, 684
MspA1I CMGCKG 2 cut(s) 35, 476
MspR9I CCNGG 1 cut(s) 631
MvaI CCWGG 1 cut(s) 631
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 1 cut(s) 14
NdeI CATATG 1 cut(s) 595
NdeII GATC 1 cut(s) 433
NheI GCTAGC 1 cut(s) 28
NlaIII CATG 3 cut(s) 484, 514, 671
NlaIV GGNNCC 1 cut(s) 435
NmuCI GTSAC 2 cut(s) 293, 577
NspI RCATGY 1 cut(s) 671
PagI TCATGA 1 cut(s) 510
PceI AGGCCT 1 cut(s) 65
PciI ACATGT 1 cut(s) 667
PdmI GAANNNNTTC 1 cut(s) 149
PfeI GAWTC 2 cut(s) 88, 233
PfoI TCCNGGA 1 cut(s) 629
PkrI GCNGC 2 cut(s) 34, 475
PleI GAGTC 1 cut(s) 294
PpsI GAGTC 1 cut(s) 294
Ppu21I YACGTR 1 cut(s) 712
PscI ACATGT 1 cut(s) 667
Psp6I CCWGG 1 cut(s) 629
PspFI CCCAGC 1 cut(s) 196
PspGI CCWGG 1 cut(s) 629
PspN4I GGNNCC 1 cut(s) 435
PspPI GGNCC 1 cut(s) 102
PsuI RGATCY 1 cut(s) 433
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 2 cut(s) 374, 666
RsaNI GTAC 2 cut(s) 373, 665
SacII CCGCGG 1 cut(s) 36
SaqAI TTAA 4 cut(s) 180, 423, 611, 684
SatI GCNGC 2 cut(s) 33, 474
Sau3AI GATC 1 cut(s) 433
Sau96I GGNCC 1 cut(s) 102
SchI GAGTC 1 cut(s) 294
ScrFI CCNGG 1 cut(s) 631
SduI GDGCHC 1 cut(s) 723
Sfr303I CCGCGG 1 cut(s) 36
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 1 cut(s) 102
SmlI CTYRAG 2 cut(s) 47, 243
SmoI CTYRAG 2 cut(s) 47, 243
Sse9I AATT 5 cut(s) 171, 248, 275, 428, 613
SseBI AGGCCT 1 cut(s) 65
SsiI CCGC 2 cut(s) 33, 35
SspMI CTAG 3 cut(s) 29, 237, 500
StuI AGGCCT 1 cut(s) 65
StyD4I CCNGG 1 cut(s) 629
StyI CCWWGG 1 cut(s) 499
TaaI ACNGT 3 cut(s) 80, 132, 650
TaiI ACGT 2 cut(s) 295, 714
TasI AATT 5 cut(s) 171, 248, 275, 428, 613
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 2 cut(s) 88, 233
Tru1I TTAA 4 cut(s) 180, 423, 611, 684
Tru9I TTAA 4 cut(s) 180, 423, 611, 684
TscAI CASTG 2 cut(s) 137, 546
TseFI GTSAC 2 cut(s) 293, 577
TseI GCWGC 1 cut(s) 473
Tsp45I GTSAC 2 cut(s) 293, 577
TspDTI ATGAA 2 cut(s) 142, 178
TspGWI ACGGA 1 cut(s) 312
TspRI CASTG 2 cut(s) 137, 546
VpaK11BI GGWCC 1 cut(s) 102
XapI RAATTY 3 cut(s) 248, 275, 613
XceI RCATGY 1 cut(s) 671
XcmI CCANNNNNNNNNTGG 1 cut(s) 204
XmaJI CCTAGG 1 cut(s) 499
XmnI GAANNNNTTC 1 cut(s) 149
XspI CTAG 3 cut(s) 29, 237, 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.