Trafficking protein particle complex subunit 5-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01100 AT2G01100 AT2G01100 |
| fragaria_vesca | FvH4_4g26261 FvH4_4g26261 FvH4_4g26261 FvH4_4g26263 |
| malus_domestica | MD13G1031200.v1.1 MD16G1033400.v1.1 |
| prunus_persica | Prupe.1G320900_v2.0.a1 Prupe.1G320900_v2.0.a1 Prupe.1G320900_v2.0.a1 |
| pyrus_communis | pycom13g02730 pycom16g02800 |
| rosa_chinensis | RchiOBHm_Chr2g0167881 RchiOBHm_Chr2g0167891 RchiOBHm_Chr4g0433871 |
| rosa_laevigata | RLG00000006721 RLG00000011334 RLG00000017078 |
| rosa_multiflora | Rmu_sc0000352.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00375270 |
| rosa_rugosa | Rorug04G0272000 Rorug04G0272000 Rorug04G0272000 |
| rosa_samantha | Rh2BG014400 Rh4AG326700 Rh4DG330900 Rh5DG507000 Rh6AG509600 Rh7BG051000 Rh7CG171900 |
| rosa_wichuraiana | Rw4G028320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 192 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 202, 478, 508 |
| AgsI | TTSAA | 4 cut(s) | 141, 181, 295, 399 |
| AluBI | AGCT | 3 cut(s) | 7, 91, 115 |
| AluI | AGCT | 3 cut(s) | 7, 91, 115 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| AoxI | GGCC | 1 cut(s) | 29 |
| AseI | ATTAAT | 1 cut(s) | 573 |
| AsuHPI | GGTGA | 2 cut(s) | 344, 491 |
| BanI | GGYRCC | 1 cut(s) | 192 |
| BccI | CCATC | 3 cut(s) | 323, 510, 572 |
| BclI | TGATCA | 1 cut(s) | 238 |
| BfaI | CTAG | 3 cut(s) | 116, 228, 318 |
| BglII | AGATCT | 1 cut(s) | 443 |
| BmiI | GGNNCC | 1 cut(s) | 194 |
| BsaBI | GATNNNNATC | 3 cut(s) | 213, 237, 501 |
| BsaJI | CCNNGG | 1 cut(s) | 526 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 202, 478, 508 |
| Bse118I | RCCGGY | 1 cut(s) | 285 |
| Bse8I | GATNNNNATC | 3 cut(s) | 213, 237, 501 |
| BseDI | CCNNGG | 1 cut(s) | 526 |
| BseGI | GGATG | 2 cut(s) | 160, 334 |
| BseJI | GATNNNNATC | 3 cut(s) | 213, 237, 501 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 202, 478, 508 |
| BseMII | CTCAG | 1 cut(s) | 49 |
| BseRI | GAGGAG | 1 cut(s) | 503 |
| BshFI | GGCC | 1 cut(s) | 31 |
| BshNI | GGYRCC | 1 cut(s) | 192 |
| BsiSI | CCGG | 1 cut(s) | 286 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 202, 478, 508 |
| BsnI | GGCC | 1 cut(s) | 31 |
| Bsp143I | GATC | 4 cut(s) | 214, 238, 443, 496 |
| Bsp19I | CCATGG | 1 cut(s) | 526 |
| BspANI | GGCC | 1 cut(s) | 31 |
| BspCNI | CTCAG | 1 cut(s) | 48 |
| BspLI | GGNNCC | 1 cut(s) | 194 |
| BspT107I | GGYRCC | 1 cut(s) | 192 |
| BsrFI | RCCGGY | 1 cut(s) | 285 |
| BssAI | RCCGGY | 1 cut(s) | 285 |
| BssECI | CCNNGG | 1 cut(s) | 526 |
| BssMI | GATC | 4 cut(s) | 214, 238, 443, 496 |
| BssT1I | CCWWGG | 1 cut(s) | 526 |
| Bst4CI | ACNGT | 1 cut(s) | 551 |
| BstDEI | CTNAG | 1 cut(s) | 35 |
| BstDSI | CCRYGG | 1 cut(s) | 526 |
| BstF5I | GGATG | 2 cut(s) | 160, 334 |
| BstKTI | GATC | 4 cut(s) | 217, 241, 446, 499 |
| BstMBI | GATC | 4 cut(s) | 214, 238, 443, 496 |
| BstX2I | RGATCY | 1 cut(s) | 443 |
| BstYI | RGATCY | 1 cut(s) | 443 |
| BsuRI | GGCC | 1 cut(s) | 31 |
| BtgI | CCRYGG | 1 cut(s) | 526 |
| BtsCI | GGATG | 2 cut(s) | 160, 334 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| Cfr10I | RCCGGY | 1 cut(s) | 285 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviAII | CATG | 3 cut(s) | 263, 473, 527 |
| CviJI | RGCY | 6 cut(s) | 7, 31, 91, 105, 115, 523 |
| CviKI_1 | RGCY | 6 cut(s) | 7, 31, 91, 105, 115, 523 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DdeI | CTNAG | 1 cut(s) | 35 |
| DpnI | GATC | 4 cut(s) | 216, 240, 445, 498 |
| DpnII | GATC | 4 cut(s) | 214, 238, 443, 496 |
| Eco130I | CCWWGG | 1 cut(s) | 526 |
| Eco147I | AGGCCT | 1 cut(s) | 31 |
| EcoT14I | CCWWGG | 1 cut(s) | 526 |
| ErhI | CCWWGG | 1 cut(s) | 526 |
| FaeI | CATG | 3 cut(s) | 266, 476, 530 |
| FaiI | YATR | 9 cut(s) | 198, 264, 324, 366, 375, 423, 425, 474, 528 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 430, 462 |
| FatI | CATG | 3 cut(s) | 262, 472, 526 |
| FbaI | TGATCA | 1 cut(s) | 238 |
| FokI | GGATG | 2 cut(s) | 167, 341 |
| FspBI | CTAG | 3 cut(s) | 116, 228, 318 |
| HaeIII | GGCC | 1 cut(s) | 31 |
| HapII | CCGG | 1 cut(s) | 286 |
| Hin1II | CATG | 3 cut(s) | 266, 476, 530 |
| HpaII | CCGG | 1 cut(s) | 286 |
| HphI | GGTGA | 2 cut(s) | 344, 491 |
| Hpy188III | TCNNGA | 2 cut(s) | 166, 509 |
| HpyAV | CCTTC | 1 cut(s) | 336 |
| HpyCH4III | ACNGT | 1 cut(s) | 551 |
| HpyCH4IV | ACGT | 1 cut(s) | 18 |
| HpyCH4V | TGCA | 4 cut(s) | 68, 97, 266, 356 |
| HpyF3I | CTNAG | 1 cut(s) | 35 |
| HpySE526I | ACGT | 1 cut(s) | 18 |
| Hsp92II | CATG | 3 cut(s) | 266, 476, 530 |
| Ksp22I | TGATCA | 1 cut(s) | 238 |
| Kzo9I | GATC | 4 cut(s) | 214, 238, 443, 496 |
| LpnPI | CCDG | 5 cut(s) | 13, 108, 175, 299, 468 |
| MaeI | CTAG | 3 cut(s) | 116, 228, 318 |
| MaeII | ACGT | 1 cut(s) | 18 |
| MaeIII | GTNAC | 1 cut(s) | 428 |
| MalI | GATC | 4 cut(s) | 216, 240, 445, 498 |
| MboI | GATC | 4 cut(s) | 214, 238, 443, 496 |
| MboII | GAAGA | 5 cut(s) | 129, 258, 267, 297, 306 |
| MflI | RGATCY | 1 cut(s) | 443 |
| MlyI | GAGTC | 2 cut(s) | 171, 419 |
| MnlI | CCTC | 7 cut(s) | 32, 42, 46, 195, 319, 472, 481 |
| MseI | TTAA | 2 cut(s) | 519, 573 |
| MspI | CCGG | 1 cut(s) | 286 |
| NcoI | CCATGG | 1 cut(s) | 526 |
| NdeII | GATC | 4 cut(s) | 214, 238, 443, 496 |
| NlaIII | CATG | 3 cut(s) | 266, 476, 530 |
| NlaIV | GGNNCC | 1 cut(s) | 194 |
| NmuCI | GTSAC | 1 cut(s) | 428 |
| PceI | AGGCCT | 1 cut(s) | 31 |
| PfeI | GAWTC | 9 cut(s) | 119, 134, 209, 224, 249, 311, 395, 416, 512 |
| PleI | GAGTC | 2 cut(s) | 170, 418 |
| PpsI | GAGTC | 2 cut(s) | 170, 418 |
| PshBI | ATTAAT | 1 cut(s) | 573 |
| PspN4I | GGNNCC | 1 cut(s) | 194 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| PsuI | RGATCY | 1 cut(s) | 443 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| SaqAI | TTAA | 2 cut(s) | 519, 573 |
| Sau3AI | GATC | 4 cut(s) | 214, 238, 443, 496 |
| SchI | GAGTC | 2 cut(s) | 171, 419 |
| SetI | ASST | 6 cut(s) | 9, 21, 57, 93, 117, 404 |
| SseBI | AGGCCT | 1 cut(s) | 31 |
| SspMI | CTAG | 3 cut(s) | 116, 228, 318 |
| StuI | AGGCCT | 1 cut(s) | 31 |
| StyI | CCWWGG | 1 cut(s) | 526 |
| TaaI | ACNGT | 1 cut(s) | 551 |
| TaiI | ACGT | 1 cut(s) | 21 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TfiI | GAWTC | 9 cut(s) | 119, 134, 209, 224, 249, 311, 395, 416, 512 |
| Tru1I | TTAA | 2 cut(s) | 519, 573 |
| Tru9I | TTAA | 2 cut(s) | 519, 573 |
| TseFI | GTSAC | 1 cut(s) | 428 |
| Tsp45I | GTSAC | 1 cut(s) | 428 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 466 |
| VspI | ATTAAT | 1 cut(s) | 573 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 554 |
| XspI | CTAG | 3 cut(s) | 116, 228, 318 |