Rh7CG287200

Secretory carrier-associated membrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0007929
Physical Location & Seq
Forward (+)
29218538 .. 29227468
8931 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG287200.1

Sequence Viewer

Length: 762 bp
ATGTGCCATAATTTGATAAATATGCAGAATGGGAAGTCACGGATTCCACCATTGGCATCTGAACCTCTTGGTTTTGGGCAGAAACATGATGCAACAGTTGATATACCATTGGACACAATGAGTGATTCTAAGCAAAAGGCAAAAGAGCTTGCAACCTGGGAAGCAGATCTAAAGAGAAGAGAAAAGGATATCAAACGAAGAGAGGATTCTGTTGCAAAAGCTGGTGTCCCTGATGATGGGAAAAATTGGCCTCCATTCTTTCCGATTATTCACCATGATATTGCCAATGAAATTCCTGTACATGCTCAAAGACTACAGTATATGGCTTTTGCAAGTTGGTTAGGTATAGTTCTTTGCCTAGTGTTCAATGTAATTGCTGTTATCATCTGTTGGGTTAGAGGAGGAGGTTCCAAAATATTTTTCCTTGCAGTCATCTATGCTCTACTTGGAATACCACTCTCATATGTGCTGTGGTACAGGCCTCTCTATCGGGCAATGAGGACAGATAGTGCCTTGAAGTTTGGTTGGTTTTTCCTGTTCTACATGCTCCATATTGGGTTTTGTATCATCGCGGCTATAGCTCCTCCAATTGTCTTTCAAGGAAAATCACTGACGGGCATTCTTGCTGCAATTGATGTCTTTTCTGACCATGCGGTGGTAGGGATATTCTACTTAATTGGGTTTGCCTTGTTTTGCTTAGAGACGCTTCTAAGCTTTTGGGTACTCCAGAAAATATACGTGTATTTCAGGGGGCACAAGTGA

Protein Analysis

253

Amino Acids

28.7

Weight (kDa)

9.04

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAMP PF04144 81 - 251 9.8e-61 SCAMP family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 655
AccII CGCG 1 cut(s) 572
AciI CCGC 2 cut(s) 572, 653
AcsI RAATTY 1 cut(s) 291
AfaI GTAC 3 cut(s) 300, 476, 723
AfiI CCNNNNNNNGG 2 cut(s) 236, 655
AflIII ACRYGT 1 cut(s) 738
AgsI TTSAA 3 cut(s) 367, 517, 599
AjnI CCWGG 1 cut(s) 155
AjuI GAANNNNNNNTTGG 2 cut(s) 404, 436
AluBI AGCT 4 cut(s) 148, 221, 581, 714
AluI AGCT 4 cut(s) 148, 221, 581, 714
Alw26I GTCTC 1 cut(s) 695
AoxI GGCC 2 cut(s) 248, 479
ApeKI GCWGC 1 cut(s) 626
ApoI RAATTY 1 cut(s) 291
AsuHPI GGTGA 1 cut(s) 263
BaeGI GKGCMC 1 cut(s) 756
BbvI GCAGC 1 cut(s) 613
BccI CCATC 1 cut(s) 230
BciT130I CCWGG 1 cut(s) 157
BcoDI GTCTC 1 cut(s) 695
BfaI CTAG 1 cut(s) 359
BfmI CTRYAG 2 cut(s) 314, 576
BglII AGATCT 1 cut(s) 166
BisI GCNGC 2 cut(s) 573, 627
BlsI GCNGC 2 cut(s) 574, 628
Bme1390I CCNGG 1 cut(s) 157
BmiI GGNNCC 1 cut(s) 409
BmrFI CCNGG 1 cut(s) 157
BmsI GCATC 2 cut(s) 65, 79
BpmI CTGGAG 1 cut(s) 710
BsaAI YACGTR 1 cut(s) 739
BsaJI CCNNGG 1 cut(s) 156
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 655
Bse3DI GCAATG 1 cut(s) 501
BseBI CCWGG 1 cut(s) 157
BseDI CCNNGG 1 cut(s) 156
BseLI CCNNNNNNNGG 2 cut(s) 236, 655
BseMI GCAATG 1 cut(s) 501
BseRI GAGGAG 3 cut(s) 414, 417, 573
BseSI GKGCMC 1 cut(s) 756
BseXI GCAGC 1 cut(s) 613
Bsh1236I CGCG 1 cut(s) 572
BshFI GGCC 2 cut(s) 250, 481
BslFI GGGAC 1 cut(s) 212
BslI CCNNNNNNNGG 2 cut(s) 236, 655
BsmAI GTCTC 1 cut(s) 695
BsmBI CGTCTC 1 cut(s) 695
BsmFI GGGAC 1 cut(s) 212
BsmI GAATGC 1 cut(s) 618
BsnI GGCC 2 cut(s) 250, 481
Bsp1286I GDGCHC 1 cut(s) 756
Bsp1407I TGTACA 1 cut(s) 298
Bsp143I GATC 1 cut(s) 166
BspACI CCGC 2 cut(s) 572, 653
BspANI GGCC 2 cut(s) 250, 481
BspFNI CGCG 1 cut(s) 572
BspLI GGNNCC 1 cut(s) 409
BsrDI GCAATG 1 cut(s) 501
BsrGI TGTACA 1 cut(s) 298
BssECI CCNNGG 1 cut(s) 156
BssMI GATC 1 cut(s) 166
Bst2UI CCWGG 1 cut(s) 157
Bst4CI ACNGT 2 cut(s) 97, 318
Bst6I CTCTTC 2 cut(s) 172, 193
BstAUI TGTACA 1 cut(s) 298
BstBAI YACGTR 1 cut(s) 739
BstC8I GCNNGC 1 cut(s) 150
BstDEI CTNAG 3 cut(s) 129, 697, 710
BstFNI CGCG 1 cut(s) 572
BstKTI GATC 1 cut(s) 169
BstMAI GTCTC 1 cut(s) 695
BstMBI GATC 1 cut(s) 166
BstMWI GCNNNNNNNGC 1 cut(s) 578
BstNI CCWGG 1 cut(s) 157
BstNSI RCATGY 2 cut(s) 305, 547
BstSCI CCNGG 1 cut(s) 155
BstSFI CTRYAG 2 cut(s) 314, 576
BstSLI GKGCMC 1 cut(s) 756
BstUI CGCG 1 cut(s) 572
BstV1I GCAGC 1 cut(s) 613
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BsuRI GGCC 2 cut(s) 250, 481
BtgZI GCGATG 1 cut(s) 553
BtsIMutI CAGTG 1 cut(s) 608
Cac8I GCNNGC 1 cut(s) 150
CseI GACGC 1 cut(s) 712
Csp6I GTAC 3 cut(s) 299, 475, 722
CviAII CATG 5 cut(s) 86, 275, 302, 544, 650
CviJI RGCY 8 cut(s) 148, 221, 250, 326, 481, 575, 581, 714
CviKI_1 RGCY 8 cut(s) 148, 221, 250, 326, 481, 575, 581, 714
CviQI GTAC 3 cut(s) 299, 475, 722
DdeI CTNAG 3 cut(s) 129, 697, 710
DpnI GATC 1 cut(s) 168
DpnII GATC 1 cut(s) 166
Eam1104I CTCTTC 2 cut(s) 172, 193
EarI CTCTTC 2 cut(s) 172, 193
Eco147I AGGCCT 1 cut(s) 481
Eco32I GATATC 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 155
EcoRV GATATC 1 cut(s) 190
Esp3I CGTCTC 1 cut(s) 695
FaeI CATG 5 cut(s) 89, 278, 305, 547, 653
FaqI GGGAC 1 cut(s) 212
FatI CATG 5 cut(s) 85, 274, 301, 543, 649
FauNDI CATATG 1 cut(s) 463
Fnu4HI GCNGC 2 cut(s) 573, 627
Fsp4HI GCNGC 2 cut(s) 573, 627
FspBI CTAG 1 cut(s) 359
GluI GCNGC 2 cut(s) 573, 627
GsuI CTGGAG 1 cut(s) 710
HaeIII GGCC 2 cut(s) 250, 481
HgaI GACGC 1 cut(s) 712
Hin1II CATG 5 cut(s) 89, 278, 305, 547, 653
HindIII AAGCTT 1 cut(s) 712
HinfI GANTC 3 cut(s) 43, 125, 206
HphI GGTGA 1 cut(s) 263
Hpy188I TCNGA 3 cut(s) 61, 264, 646
Hpy188III TCNNGA 1 cut(s) 727
HpyCH4III ACNGT 2 cut(s) 97, 318
HpyCH4IV ACGT 1 cut(s) 738
HpyCH4V TGCA 7 cut(s) 25, 92, 152, 215, 332, 428, 629
HpyF10VI GCNNNNNNNGC 1 cut(s) 578
HpyF3I CTNAG 3 cut(s) 129, 697, 710
HpySE526I ACGT 1 cut(s) 738
Hsp92II CATG 5 cut(s) 89, 278, 305, 547, 653
Kzo9I GATC 1 cut(s) 166
LmnI GCTCC 2 cut(s) 552, 586
LpnPI CCDG 9 cut(s) 142, 169, 207, 243, 309, 463, 548, 733, 740
Lsp1109I GCAGC 1 cut(s) 613
LweI GCATC 2 cut(s) 65, 79
MaeI CTAG 1 cut(s) 359
MaeII ACGT 1 cut(s) 738
MaeIII GTNAC 1 cut(s) 36
MalI GATC 1 cut(s) 168
MboI GATC 1 cut(s) 166
MboII GAAGA 2 cut(s) 189, 210
MfeI CAATTG 2 cut(s) 588, 630
MflI RGATCY 1 cut(s) 166
MhlI GDGCHC 1 cut(s) 756
MluCI AATT 7 cut(s) 10, 244, 291, 372, 588, 630, 675
MnlI CCTC 9 cut(s) 75, 196, 261, 392, 395, 398, 492, 492, 594
MseI TTAA 1 cut(s) 674
MspR9I CCNGG 1 cut(s) 157
MunI CAATTG 2 cut(s) 588, 630
Mva1269I GAATGC 1 cut(s) 618
MvaI CCWGG 1 cut(s) 157
MvnI CGCG 1 cut(s) 572
MwoI GCNNNNNNNGC 1 cut(s) 578
NdeI CATATG 1 cut(s) 463
NdeII GATC 1 cut(s) 166
NlaIII CATG 5 cut(s) 89, 278, 305, 547, 653
NlaIV GGNNCC 1 cut(s) 409
NmuCI GTSAC 1 cut(s) 36
NspI RCATGY 2 cut(s) 305, 547
PceI AGGCCT 1 cut(s) 481
PctI GAATGC 1 cut(s) 618
PfeI GAWTC 3 cut(s) 43, 125, 206
PflMI CCANNNNNTGG 1 cut(s) 655
PkrI GCNGC 2 cut(s) 574, 628
Ppu21I YACGTR 1 cut(s) 739
Psp6I CCWGG 1 cut(s) 155
PspGI CCWGG 1 cut(s) 155
PspN4I GGNNCC 1 cut(s) 409
PsuI RGATCY 1 cut(s) 166
RsaI GTAC 3 cut(s) 300, 476, 723
RsaNI GTAC 3 cut(s) 299, 475, 722
SaqAI TTAA 1 cut(s) 674
SatI GCNGC 2 cut(s) 573, 627
Sau3AI GATC 1 cut(s) 166
ScrFI CCNGG 1 cut(s) 157
SduI GDGCHC 1 cut(s) 756
SetI ASST 9 cut(s) 67, 150, 158, 223, 346, 409, 583, 716, 741
SfaNI GCATC 2 cut(s) 65, 79
SfcI CTRYAG 2 cut(s) 314, 576
Sse9I AATT 7 cut(s) 10, 244, 291, 372, 588, 630, 675
SseBI AGGCCT 1 cut(s) 481
SsiI CCGC 2 cut(s) 572, 653
SspI AATATT 1 cut(s) 417
SspMI CTAG 1 cut(s) 359
StuI AGGCCT 1 cut(s) 481
StyD4I CCNGG 1 cut(s) 155
TaaI ACNGT 2 cut(s) 97, 318
TaiI ACGT 1 cut(s) 741
TasI AATT 7 cut(s) 10, 244, 291, 372, 588, 630, 675
TatI WGTACW 1 cut(s) 298
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 3 cut(s) 43, 125, 206
Tru1I TTAA 1 cut(s) 674
Tru9I TTAA 1 cut(s) 674
TscAI CASTG 1 cut(s) 615
TseFI GTSAC 1 cut(s) 36
TseI GCWGC 1 cut(s) 626
Tsp45I GTSAC 1 cut(s) 36
TspDTI ATGAA 1 cut(s) 303
TspGWI ACGGA 1 cut(s) 55
TspRI CASTG 1 cut(s) 615
Van91I CCANNNNNTGG 1 cut(s) 655
XapI RAATTY 1 cut(s) 291
XceI RCATGY 2 cut(s) 305, 547
XspI CTAG 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.