Rh7CG428000

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0012017
Physical Location & Seq
Reverse (-)
55805146 .. 55810823
5678 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG428000.1

Sequence Viewer

Length: 2049 bp
ATGATTATGGCACTAAAAGCTAAACCCATCTCATCCCCATCACCATTTTTCAGGTACTCGCCGCAAAACCCAATTTTCTTTCTCCCTCGATTACTCTCTTCCCAAACCCCAATCGACAGTGACGTCGACACTGTCTACCGCATAGTCAGTAGCTCCACCCGTTCCAAAAACTTGAAGCAAAACTTGAAATCGAGTGGTGTTTTCCTCTCAAATGATTTGATAGATGAGGTTCTGAAGCGTGCTAGGTTCAGCCATGGAAACCCTTTACAGGCTCTCGAGTTTTTCAATCACACTGGGAATAGAAGAGGGTTTTATCACACCACATTTGCACTGGACACAATGCTTTATATGTTGGGAAGAAGTCGAATGTTCGAAAAGATGTGGGAGGTTTTGGTTGAGATCAAGAGTAAGGATAGGAATTTGATAACTCCGCGTACTGTGATGGTTGTTTTAGCTAGGATTGCTAAGGTTTGTTCTGTTAGGGAGACTGTGGAGTGTTTTAGAAAGTTCAAGAAGCTTGTGCCCGAATTCGACACAGCTTGTTTCAATGCGTTGTTGAGGACTCTTTGTCAAGAGAAGAGTATGACAGATGCTAGGAATGTGTATCATAAGCTGAAGCAGAGCTTTAGGCCGAATTTGCAGACCTTTAATATATTGTTATCGGGTTGGAAGTCATCAGACGAAGCCGAGGGGTTTTTCGAGGAGATGAGGGAGATGGGTCTGAAACCTGATATTGTTTCGTACAATTGTTTGATTGATGTTTATAGTAAGAATAGAGAAATGGAGAAAGCGTTTAAGGTGATGGAAACAATGCGTGACGAGGATATATCACCGGATAAGATCACTTATACTTGTGTCATTGGGGGATTGGGGTTGGTTGGTCAGCCTGATAAAGCCAGAGATGTGTTGAAGGAAATGAAGGAGCTTGGGTGCTACCCAGATGTTGCGGCATACAATGCTGCCATTAGGAATTTTTGCATTGCAAAGAGGCTTGGTGATGCTAATGGGTTGATGGAGGAGATGATAAGTAATGGTTTGAGTCCAAATGCAACTACTTACAATTTGTTCTTTAGGGTTTTCTTTTGGTCAAGTGACTTGCAGAACTCTTGGAGCTTGTATGGGAGAATGATGCATACTGGGTGTCTGCCAAATACACAGTCGTGCATGTTCCTGATCAGGTTGTTTAAGAGGCTGGAAAAGGTGGATATGGCATTGCAGCTGTGGAATGATATGGTCGAGAGGGGTTTTGGGTCTTATATATTGGTATCTGATGTGCTGTTTGATTTGCTGTGTGATATGGGTAAACTGACAGAAGCAGAAACATGCTTCTTGCAGATGGTGGAGAAGGGGCATAAGCCAAGTAATGTTTCCTTTAGAAGGATCAAGGTGCTTATGGAACTGGCAAACAAGCATGAGGCCCTCAAGAACTTGACGGAGAAAATGACACTTTTTGGCTCTTCAATCCATCTTCCTGAGAGTATGGATAGGTCAACAGAGACTGCTTGTTCCACAAATTTCCCAACTTCCATAATTCTGTTAAACAAGTATCCAGTTAGAGTCAGAATCACAGTAAGGAAATATATATTTGTGAGGCAAAATCAATCAGAGTGGAGGCAGCTTCAGCTCAAAGTGTTGCATGATTGGAAGACCAATAAAAATGGTTGCAAGGCACGTATTGCTGCCGAGTACAGTGGTGTCAACCTTGAATTGGTGAAAATTTTTGAGATGGGGATGTCCAATAAGACTGCCAATTTTCTCAAATTGACCCCTATTGGGAAGCTTCCTTTGTTAGAAACACCTGTTGGTCCTGTTTTTGAGAGCAATGCCATTGCACGCTATGTTACTAGCTTGAAAGCGGATAATCCTCTTTTTGCCCTTGTGGAGCAATGGATAGATTTTGCATCTTTGGAGATTGATGCCAATATGTTGCGATGGTTGAAACAGCGTATGGGTTATGCTGTTTACCTTCCTCTGGATGAGGATGCGGCAATTTCTTCCTTGAAGAGAGCACTAACTGCTTTGAACATTCATCTTGCTTCCAACACGTAA

Protein Analysis

682

Amino Acids

78.14

Weight (kDa)

9.13

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 178 - 222 9.1e-07 PPR repeat family
PPR_3 PF13812 233 - 289 7.9e-11 Pentatricopeptide repeat domain
PPR_long PF17177 233 - 359 1.7e-09 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 236 - 330 1.9e-07 Fungal tetratrico peptide repeats
PPR_1 PF12854 239 - 272 1.9e-08 PPR repeat
PPR_2 PF13041 243 - 290 2.7e-16 PPR repeat family
PPR PF01535 246 - 275 8e-07 PPR repeat
PPR PF01535 281 - 311 1.5e-06 PPR repeat
PPR_2 PF13041 285 - 326 8e-07 PPR repeat family
PPR_3 PF13812 302 - 359 1.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 313 - 360 5.6e-10 PPR repeat family
GST_N_3 PF13417 545 - 620 1e-05 Glutathione S-transferase, N-terminal domain
GST_N PF02798 547 - 615 3.2e-10 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012017)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02420
fragaria_vesca FvH4_5g32610 FvH4_5g32610 FvH4_5g32610
malus_domestica MD08G1216300.v1.1
prunus_persica Prupe.1G549200_v2.0.a1
pyrus_communis pycom08g18730
rosa_chinensis RchiOBHm_Chr7g0230241
rosa_laevigata RLG00000001507
rosa_multiflora Rmu_sc0002822.1_g000019 Rmu_sc0008506.1_g000024
rosa_roxburghii Rroxscaffold_3G00230280
rosa_rugosa Rorug07G0260000
rosa_samantha Rh7AG409400 Rh7BG389300 Rh7CG428000 Rh7DG407000
rosa_wichuraiana Rw0G018590 Rw0G022620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 122
AatII GACGTC 1 cut(s) 126
AccI GTMKAC 2 cut(s) 126, 135
AccII CGCG 1 cut(s) 433
AciI CCGC 6 cut(s) 62, 139, 431, 947, 1856, 1985
AclWI GGATC 1 cut(s) 1388
AcsI RAATTY 6 cut(s) 418, 527, 634, 970, 1513, 1716
AcuI CTGAAG 3 cut(s) 254, 635, 1604
AcyI GRCGYC 1 cut(s) 123
AfaI GTAC 4 cut(s) 56, 436, 743, 1688
AfiI CCNNNNNNNGG 5 cut(s) 268, 1377, 1708, 1773, 1972
AflIII ACRYGT 1 cut(s) 2043
AhdI GACNNNNNGTC 1 cut(s) 567
AjuI GAANNNNNNNTTGG 4 cut(s) 1351, 1383, 1785, 1817
AleI CACNNNNGTG 1 cut(s) 1159
Alw21I GWGCWC 1 cut(s) 2011
Alw26I GTCTC 2 cut(s) 479, 1490
AlwI GGATC 1 cut(s) 1388
AlwNI CAGNNNCTG 1 cut(s) 1499
Ama87I CYCGRG 1 cut(s) 275
AoxI GGCC 2 cut(s) 629, 1416
ApeKI GCWGC 4 cut(s) 959, 1216, 1615, 1679
ApoI RAATTY 6 cut(s) 418, 527, 634, 970, 1513, 1716
ArsI GACNNNNNNTTYG 2 cut(s) 1142, 1174
AspS9I GGNCC 2 cut(s) 1417, 1805
AsuHPI GGTGA 5 cut(s) 33, 811, 822, 1007, 1723
AsuII TTCGAA 1 cut(s) 372
AvaI CYCGRG 1 cut(s) 275
AvaII GGWCC 1 cut(s) 1805
BaeGI GKGCMC 1 cut(s) 525
BbsI GAAGAC 1 cut(s) 1652
Bbv12I GWGCWC 1 cut(s) 2011
BbvI GCAGC 4 cut(s) 946, 1228, 1627, 1666
BciVI GTATCC 1 cut(s) 1557
BclI TGATCA 1 cut(s) 1173
BcoDI GTCTC 2 cut(s) 479, 1490
BfaI CTAG 4 cut(s) 243, 456, 594, 1845
BfuI GTATCC 1 cut(s) 1557
BisI GCNGC 7 cut(s) 62, 948, 960, 1217, 1616, 1680, 1986
BlsI GCNGC 7 cut(s) 63, 949, 961, 1218, 1617, 1681, 1987
Bme18I GGWCC 1 cut(s) 1805
BmeRI GACNNNNNGTC 1 cut(s) 567
BmeT110I CYCGRG 1 cut(s) 275
BmgT120I GGNCC 2 cut(s) 1417, 1805
BmrI ACTGGG 2 cut(s) 303, 1146
BmsI GCATC 6 cut(s) 580, 988, 1119, 1906, 1910, 1972
BmuI ACTGGG 2 cut(s) 303, 1146
BpiI GAAGAC 1 cut(s) 1652
Bpu10I CCTNAGC 1 cut(s) 465
Bpu14I TTCGAA 1 cut(s) 372
BpuEI CTTGAG 1 cut(s) 1406
BsaAI YACGTR 2 cut(s) 1673, 2046
BsaHI GRCGYC 1 cut(s) 123
BsaJI CCNNGG 2 cut(s) 253, 687
BsaWI WCCGGW 1 cut(s) 832
BsaXI ACNNNNNCTCC 4 cut(s) 776, 806, 914, 944
Bsc4I CCNNNNNNNGG 5 cut(s) 268, 1377, 1708, 1773, 1972
Bse1I ACTGG 5 cut(s) 298, 336, 1141, 1404, 1550
Bse3DI GCAATG 5 cut(s) 978, 1211, 1827, 1828, 1892
BseDI CCNNGG 2 cut(s) 253, 687
BseGI GGATG 4 cut(s) 32, 1737, 1981, 1987
BseLI CCNNNNNNNGG 5 cut(s) 268, 1377, 1708, 1773, 1972
BseMI GCAATG 5 cut(s) 978, 1211, 1827, 1828, 1892
BseMII CTCAG 1 cut(s) 1464
BseNI ACTGG 5 cut(s) 298, 336, 1141, 1404, 1550
BseRI GAGGAG 2 cut(s) 716, 1031
BseSI GKGCMC 1 cut(s) 525
BseXI GCAGC 4 cut(s) 946, 1228, 1627, 1666
Bsh1236I CGCG 1 cut(s) 433
BshFI GGCC 2 cut(s) 631, 1418
BsiHKAI GWGCWC 1 cut(s) 2011
BsiHKCI CYCGRG 1 cut(s) 275
BsiSI CCGG 1 cut(s) 833
BslI CCNNNNNNNGG 5 cut(s) 268, 1377, 1708, 1773, 1972
BsmAI GTCTC 2 cut(s) 479, 1490
BsnI GGCC 2 cut(s) 631, 1418
BsoBI CYCGRG 1 cut(s) 275
Bsp119I TTCGAA 1 cut(s) 372
Bsp1286I GDGCHC 2 cut(s) 525, 2011
Bsp143I GATC 4 cut(s) 399, 840, 1173, 1380
Bsp19I CCATGG 1 cut(s) 253
BspACI CCGC 6 cut(s) 62, 139, 431, 947, 1856, 1985
BspANI GGCC 2 cut(s) 631, 1418
BspCNI CTCAG 1 cut(s) 1465
BspFNI CGCG 1 cut(s) 433
BspPI GGATC 1 cut(s) 1388
BspQI GCTCTTC 1 cut(s) 1462
BspT104I TTCGAA 1 cut(s) 372
BsrDI GCAATG 5 cut(s) 978, 1211, 1827, 1828, 1892
BsrI ACTGG 5 cut(s) 298, 336, 1141, 1404, 1550
BssECI CCNNGG 2 cut(s) 253, 687
BssMI GATC 4 cut(s) 399, 840, 1173, 1380
BssNI GRCGYC 1 cut(s) 123
BssT1I CCWWGG 1 cut(s) 253
Bst4CI ACNGT 7 cut(s) 119, 133, 439, 490, 1158, 1570, 1691
Bst6I CTCTTC 5 cut(s) 103, 298, 572, 1462, 1997
BstACI GRCGYC 1 cut(s) 123
BstAPI GCANNNNNTGC 3 cut(s) 956, 1676, 2015
BstBAI YACGTR 2 cut(s) 1673, 2046
BstBI TTCGAA 1 cut(s) 372
BstC8I GCNNGC 2 cut(s) 240, 1834
BstDEI CTNAG 2 cut(s) 465, 1473
BstDSI CCRYGG 1 cut(s) 253
BstENI CCTNNNNNAGG 1 cut(s) 1375
BstF5I GGATG 4 cut(s) 32, 1737, 1981, 1987
BstFNI CGCG 1 cut(s) 433
BstKTI GATC 4 cut(s) 402, 843, 1176, 1383
BstMAI GTCTC 2 cut(s) 479, 1490
BstMBI GATC 4 cut(s) 399, 840, 1173, 1380
BstMWI GCNNNNNNNGC 7 cut(s) 17, 461, 637, 956, 1621, 1676, 2015
BstNSI RCATGY 2 cut(s) 1168, 1326
BstSLI GKGCMC 1 cut(s) 525
BstUI CGCG 1 cut(s) 433
BstV1I GCAGC 4 cut(s) 946, 1228, 1627, 1666
BstV2I GAAGAC 1 cut(s) 1652
BsuI GTATCC 1 cut(s) 1557
BsuRI GGCC 2 cut(s) 631, 1418
BtgI CCRYGG 1 cut(s) 253
BtgZI GCGATG 1 cut(s) 1945
BtsCI GGATG 4 cut(s) 32, 1737, 1981, 1987
BtsIMutI CAGTG 5 cut(s) 124, 129, 291, 329, 1696
Cac8I GCNNGC 2 cut(s) 240, 1834
CaiI CAGNNNCTG 1 cut(s) 1499
Cfr13I GGNCC 2 cut(s) 1417, 1805
Csp6I GTAC 4 cut(s) 55, 435, 742, 1687
CspCI CAANNNNNGTGG 2 cut(s) 1589, 1624
CviAII CATG 5 cut(s) 254, 1165, 1323, 1412, 1637
CviQI GTAC 4 cut(s) 55, 435, 742, 1687
DdeI CTNAG 2 cut(s) 465, 1473
DpnI GATC 4 cut(s) 401, 842, 1175, 1382
DpnII GATC 4 cut(s) 399, 840, 1173, 1380
DrdI GACNNNNNNGTC 1 cut(s) 122
DriI GACNNNNNGTC 1 cut(s) 567
DseDI GACNNNNNNGTC 1 cut(s) 122
Eam1104I CTCTTC 5 cut(s) 103, 298, 572, 1462, 1997
Eam1105I GACNNNNNGTC 1 cut(s) 567
EarI CTCTTC 5 cut(s) 103, 298, 572, 1462, 1997
Eco130I CCWWGG 1 cut(s) 253
Eco47I GGWCC 1 cut(s) 1805
Eco57I CTGAAG 3 cut(s) 254, 635, 1604
Eco88I CYCGRG 1 cut(s) 275
EcoNI CCTNNNNNAGG 1 cut(s) 1375
EcoO109I RGGNCCY 1 cut(s) 1417
EcoRI GAATTC 1 cut(s) 527
EcoT14I CCWWGG 1 cut(s) 253
EcoT22I ATGCAT 1 cut(s) 1134
ErhI CCWWGG 1 cut(s) 253
FaeI CATG 5 cut(s) 257, 1168, 1326, 1415, 1640
FalI AAGNNNNNCTT 4 cut(s) 167, 199, 608, 640
FatI CATG 5 cut(s) 253, 1164, 1322, 1411, 1636
FbaI TGATCA 1 cut(s) 1173
FblI GTMKAC 2 cut(s) 126, 135
Fnu4HI GCNGC 7 cut(s) 62, 948, 960, 1217, 1616, 1680, 1986
FokI GGATG 4 cut(s) 19, 1744, 1988, 1994
Fsp4HI GCNGC 7 cut(s) 62, 948, 960, 1217, 1616, 1680, 1986
FspBI CTAG 4 cut(s) 243, 456, 594, 1845
GluI GCNGC 7 cut(s) 62, 948, 960, 1217, 1616, 1680, 1986
HaeIII GGCC 2 cut(s) 631, 1418
HapII CCGG 1 cut(s) 833
Hin1I GRCGYC 1 cut(s) 123
Hin1II CATG 5 cut(s) 257, 1168, 1326, 1415, 1640
HincII GTYRAC 3 cut(s) 127, 1491, 1699
HindII GTYRAC 3 cut(s) 127, 1491, 1699
HindIII AAGCTT 2 cut(s) 515, 1778
HinfI GANTC 4 cut(s) 562, 1039, 1557, 1563
HpaII CCGG 1 cut(s) 833
HphI GGTGA 5 cut(s) 33, 811, 822, 1007, 1723
Hpy166II GTNNAC 6 cut(s) 127, 136, 1304, 1491, 1699, 1963
Hpy188I TCNGA 6 cut(s) 234, 679, 723, 1270, 1562, 1606
Hpy188III TCNNGA 9 cut(s) 275, 403, 511, 572, 1171, 1237, 1423, 1472, 1973
Hpy8I GTNNAC 6 cut(s) 127, 136, 1304, 1491, 1699, 1963
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 5 cut(s) 904, 913, 1339, 1371, 1976
HpyCH4III ACNGT 7 cut(s) 119, 133, 439, 490, 1158, 1570, 1691
HpyCH4IV ACGT 3 cut(s) 123, 1672, 2045
HpyF10VI GCNNNNNNNGC 7 cut(s) 17, 461, 637, 956, 1621, 1676, 2015
HpyF3I CTNAG 2 cut(s) 465, 1473
HpySE526I ACGT 3 cut(s) 123, 1672, 2045
Hsp92I GRCGYC 1 cut(s) 123
Hsp92II CATG 5 cut(s) 257, 1168, 1326, 1415, 1640
Ksp22I TGATCA 1 cut(s) 1173
Kzo9I GATC 4 cut(s) 399, 840, 1173, 1380
LguI GCTCTTC 1 cut(s) 1462
LmnI GCTCC 4 cut(s) 158, 922, 1110, 1882
Lsp1109I GCAGC 4 cut(s) 946, 1228, 1627, 1666
LweI GCATC 6 cut(s) 580, 988, 1119, 1906, 1910, 1972
MaeI CTAG 4 cut(s) 243, 456, 594, 1845
MaeII ACGT 3 cut(s) 123, 1672, 2045
MaeIII GTNAC 4 cut(s) 119, 815, 1091, 1840
MalI GATC 4 cut(s) 401, 842, 1175, 1382
MboI GATC 4 cut(s) 399, 840, 1173, 1380
MboII GAAGA 9 cut(s) 90, 315, 369, 589, 1449, 1460, 1657, 1986, 2014
MfeI CAATTG 1 cut(s) 745
MhlI GDGCHC 2 cut(s) 525, 2011
MlyI GAGTC 3 cut(s) 556, 1048, 1566
MmeI TCCRAC 1 cut(s) 647
Mph1103I ATGCAT 1 cut(s) 1134
MseI TTAA 4 cut(s) 648, 795, 1185, 1538
MslI CAYNNNNRTG 1 cut(s) 1159
MspA1I CMGCKG 1 cut(s) 1219
MspI CCGG 1 cut(s) 833
MunI CAATTG 1 cut(s) 745
MvnI CGCG 1 cut(s) 433
MwoI GCNNNNNNNGC 7 cut(s) 17, 461, 637, 956, 1621, 1676, 2015
NcoI CCATGG 1 cut(s) 253
NdeII GATC 4 cut(s) 399, 840, 1173, 1380
NlaIII CATG 5 cut(s) 257, 1168, 1326, 1415, 1640
NmeAIII GCCGAG 2 cut(s) 712, 1708
NmuCI GTSAC 3 cut(s) 119, 815, 1091
NsiI ATGCAT 1 cut(s) 1134
NspI RCATGY 2 cut(s) 1168, 1326
NspV TTCGAA 1 cut(s) 372
OliI CACNNNNGTG 1 cut(s) 1159
PaeR7I CTCGAG 1 cut(s) 275
PciSI GCTCTTC 1 cut(s) 1462
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PfeI GAWTC 1 cut(s) 1563
PflFI GACNNNGTC 1 cut(s) 131
PkrI GCNGC 7 cut(s) 63, 949, 961, 1218, 1617, 1681, 1987
PleI GAGTC 3 cut(s) 556, 1047, 1565
PpsI GAGTC 3 cut(s) 556, 1047, 1565
Ppu21I YACGTR 2 cut(s) 1673, 2046
PspPI GGNCC 2 cut(s) 1417, 1805
PstNI CAGNNNCTG 1 cut(s) 1499
PsyI GACNNNGTC 1 cut(s) 131
PvuII CAGCTG 1 cut(s) 1219
RsaI GTAC 4 cut(s) 56, 436, 743, 1688
RsaNI GTAC 4 cut(s) 55, 435, 742, 1687
RseI CAYNNNNRTG 1 cut(s) 1159
SalI GTCGAC 1 cut(s) 125
SapI GCTCTTC 1 cut(s) 1462
SaqAI TTAA 4 cut(s) 648, 795, 1185, 1538
SatI GCNGC 7 cut(s) 62, 948, 960, 1217, 1616, 1680, 1986
Sau3AI GATC 4 cut(s) 399, 840, 1173, 1380
Sau96I GGNCC 2 cut(s) 1417, 1805
SchI GAGTC 3 cut(s) 556, 1048, 1566
SduI GDGCHC 2 cut(s) 525, 2011
SfaNI GCATC 6 cut(s) 580, 988, 1119, 1906, 1910, 1972
Sfr274I CTCGAG 1 cut(s) 275
SfuI TTCGAA 1 cut(s) 372
SinI GGWCC 1 cut(s) 1805
SlaI CTCGAG 1 cut(s) 275
SmiMI CAYNNNNRTG 1 cut(s) 1159
SmlI CTYRAG 2 cut(s) 275, 1421
SmoI CTYRAG 2 cut(s) 275, 1421
SsiI CCGC 6 cut(s) 62, 139, 431, 947, 1856, 1985
SspMI CTAG 4 cut(s) 243, 456, 594, 1845
StyI CCWWGG 1 cut(s) 253
TaaI ACNGT 7 cut(s) 119, 133, 439, 490, 1158, 1570, 1691
TaiI ACGT 3 cut(s) 126, 1675, 2048
TatI WGTACW 1 cut(s) 1686
TauI GCSGC 3 cut(s) 64, 950, 1988
TfiI GAWTC 1 cut(s) 1563
Tru1I TTAA 4 cut(s) 648, 795, 1185, 1538
Tru9I TTAA 4 cut(s) 648, 795, 1185, 1538
TscAI CASTG 5 cut(s) 124, 136, 298, 336, 1696
TseFI GTSAC 3 cut(s) 119, 815, 1091
TseI GCWGC 4 cut(s) 959, 1216, 1615, 1679
Tsp45I GTSAC 3 cut(s) 119, 815, 1091
TspDTI ATGAA 2 cut(s) 932, 2018
TspGWI ACGGA 1 cut(s) 1448
TspRI CASTG 5 cut(s) 124, 136, 298, 336, 1696
Tth111I GACNNNGTC 1 cut(s) 131
VpaK11BI GGWCC 1 cut(s) 1805
XagI CCTNNNNNAGG 1 cut(s) 1375
XapI RAATTY 6 cut(s) 418, 527, 634, 970, 1513, 1716
XceI RCATGY 2 cut(s) 1168, 1326
XcmI CCANNNNNNNNNTGG 1 cut(s) 328
XhoI CTCGAG 1 cut(s) 275
XmiI GTMKAC 2 cut(s) 126, 135
XspI CTAG 4 cut(s) 243, 456, 594, 1845
ZraI GACGTC 1 cut(s) 124
Zsp2I ATGCAT 1 cut(s) 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.