Rh7DG411500

Glutathione S-transferase, N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0006188
Physical Location & Seq
Reverse (-)
57884251 .. 57896335
12085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG411500.1

Sequence Viewer

Length: 1026 bp
ATGTCTCTAACATTCTCTCAAACACTAGTCCTCTATTCCTCAGACCCACCTCACACTTGTCTCAATTCAATTCGGAAGCTTTCGCCAACATTCTACAGAAATGGCAGCAACTCTGTTTCTCGCAGAAACAACAGATTTCAGTTCCATGCAAACTCCACTGACTCAGACGACGAATTGGGAACTAGCCAAGTTGCTGCCGTTTCCAACCCATCATCCACCAGCCTTCTCTCTTTTCTTTGCCCCTTGCTCAAACTCTTCTCCGGAGGAGATCCCTCACAAGAACGGAACTTTACCTTGGAGGTAGCCACATCTTCCTTGTCTACCTTGGCTAGATTCCCTTGGGGATCAAGATCTCTATCCAATAATTCGGACAGCCAGGAAGTCACTACCTTGGATCCTCCTCTGCGTCTGCAGCTTTTTGAATTCGAGGCCTGCCCTTTTTGCAGGAGGGTTCGTGAAGCTATGACTGAGCTAGATCTTTCAGCAGAGGTGTATCCTTGTCCAAAAGGTTCGATAAGACACAGAGAATTGGTTAACAGATCTGGTGGAAAAGAGCAATTTCCTTTTCTCATTGATCCAAATACCGGTTTTTCAATGTATGAAAGCGGTGAAATCGTGAGATACCTATTCCAGCAATATGGGAAAGGCAGAAAACCTTCACCAGGGCTTTTGGAAAGTACATTGCTTACAGGGTGGATGCCGACAATATTTCGAGCAGGGAGAGGAATGACATTATGGGAAAGGGCTACTGTAGAGCCACCACCTGAAAAGCTGGAACTTTACTCGTACGAAAATAATCCGTATGCACGAATTGTGCGTGAGGCACTTTGTGAGTTGGAGCTTCCTTACATCCTACAGAATGTAGGAGAAGGGTCCCTGCGGTTAAAGCTGCTTGTTGATGCATCGGGGTCCAAAGAGAAGACGTGGTGGTGCCAAGTGAGGCTAGGGTTTGCGAGTCAAGGAGTCATGGATTCCATGGGACATGTATTCACCACAACAACTGTGCTCTCGTCTGCCGTAACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166
Pfam Domains
Protein Families
GST_N_3

Protein Analysis

341

Amino Acids

38.13

Weight (kDa)

6.47

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N_3 PF13417 139 - 214 4.5e-19 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 144 - 209 1.3e-07 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 930
AccI GTMKAC 1 cut(s) 320
AccIII TCCGGA 1 cut(s) 260
AciI CCGC 2 cut(s) 606, 880
AclWI GGATC 5 cut(s) 263, 352, 389, 402, 569
AcsI RAATTY 1 cut(s) 422
AdeI CACNNNGTG 1 cut(s) 830
AfaI GTAC 2 cut(s) 679, 788
AfiI CCNNNNNNNGG 2 cut(s) 584, 662
AflIII ACRYGT 1 cut(s) 982
AgeI ACCGGT 1 cut(s) 584
AgsI TTSAA 3 cut(s) 69, 422, 594
AhlI ACTAGT 1 cut(s) 25
AjiI CACGTC 1 cut(s) 924
AjnI CCWGG 2 cut(s) 375, 661
AjuI GAANNNNNNNTTGG 2 cut(s) 278, 310
AluBI AGCT 7 cut(s) 79, 415, 461, 472, 772, 841, 889
AluI AGCT 7 cut(s) 79, 415, 461, 472, 772, 841, 889
Alw21I GWGCWC 1 cut(s) 1008
Alw26I GTCTC 2 cut(s) 9, 65
AlwI GGATC 5 cut(s) 263, 352, 389, 402, 569
Aor13HI TCCGGA 1 cut(s) 260
AoxI GGCC 1 cut(s) 429
ApeKI GCWGC 4 cut(s) 105, 194, 412, 889
ApoI RAATTY 1 cut(s) 422
AsiGI ACCGGT 1 cut(s) 584
Asp700I GAANNNNTTC 1 cut(s) 655
AspS9I GGNCC 2 cut(s) 873, 909
AsuHPI GGTGA 3 cut(s) 620, 651, 982
AvaII GGWCC 2 cut(s) 873, 909
BamHI GGATCC 1 cut(s) 394
BanI GGYRCC 1 cut(s) 930
BbsI GAAGAC 1 cut(s) 926
Bbv12I GWGCWC 1 cut(s) 1008
BbvI GCAGC 4 cut(s) 117, 181, 424, 876
BccI CCATC 1 cut(s) 217
BceAI ACGGC 2 cut(s) 182, 1001
BciT130I CCWGG 2 cut(s) 377, 663
BciVI GTATCC 1 cut(s) 504
BcoDI GTCTC 2 cut(s) 9, 65
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 5 cut(s) 26, 183, 330, 473, 944
BfmI CTRYAG 4 cut(s) 94, 410, 750, 854
BfuI GTATCC 1 cut(s) 504
BglII AGATCT 3 cut(s) 350, 475, 539
BisI GCNGC 4 cut(s) 106, 195, 413, 890
BlsI GCNGC 4 cut(s) 107, 196, 414, 891
Bme1390I CCNGG 2 cut(s) 377, 663
Bme18I GGWCC 2 cut(s) 873, 909
BmgBI CACGTC 1 cut(s) 924
BmgT120I GGNCC 2 cut(s) 873, 909
BmiI GGNNCC 5 cut(s) 396, 874, 875, 910, 932
BmrFI CCNGG 2 cut(s) 377, 663
BmsI GCATC 3 cut(s) 687, 889, 911
BpiI GAAGAC 1 cut(s) 926
BsaBI GATNNNNATC 2 cut(s) 349, 355
BsaJI CCNNGG 6 cut(s) 294, 324, 338, 390, 662, 975
BsaWI WCCGGW 2 cut(s) 260, 584
BsaXI ACNNNNNCTCC 2 cut(s) 439, 469
Bsc4I CCNNNNNNNGG 2 cut(s) 584, 662
Bse118I RCCGGY 1 cut(s) 584
Bse3DI GCAATG 1 cut(s) 680
Bse8I GATNNNNATC 2 cut(s) 349, 355
BseAI TCCGGA 1 cut(s) 260
BseBI CCWGG 2 cut(s) 377, 663
BseDI CCNNGG 6 cut(s) 294, 324, 338, 390, 662, 975
BseGI GGATG 3 cut(s) 212, 702, 849
BseJI GATNNNNATC 2 cut(s) 349, 355
BseLI CCNNNNNNNGG 2 cut(s) 584, 662
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 3 cut(s) 54, 177, 459
BseRI GAGGAG 2 cut(s) 279, 390
BseXI GCAGC 4 cut(s) 117, 181, 424, 876
BshFI GGCC 1 cut(s) 431
BshNI GGYRCC 1 cut(s) 930
BshTI ACCGGT 1 cut(s) 584
BsiHKAI GWGCWC 1 cut(s) 1008
BsiSI CCGG 2 cut(s) 261, 585
BsiWI CGTACG 1 cut(s) 786
BslFI GGGAC 2 cut(s) 859, 993
BslI CCNNNNNNNGG 2 cut(s) 584, 662
BsmAI GTCTC 2 cut(s) 9, 65
BsmFI GGGAC 2 cut(s) 859, 993
BsnI GGCC 1 cut(s) 431
Bsp1286I GDGCHC 1 cut(s) 1008
Bsp13I TCCGGA 1 cut(s) 260
Bsp143I GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
Bsp19I CCATGG 1 cut(s) 975
BspACI CCGC 2 cut(s) 606, 880
BspANI GGCC 1 cut(s) 431
BspCNI CTCAG 3 cut(s) 53, 176, 460
BspEI TCCGGA 1 cut(s) 260
BspLI GGNNCC 5 cut(s) 396, 874, 875, 910, 932
BspMAI CTGCAG 1 cut(s) 414
BspPI GGATC 5 cut(s) 263, 352, 389, 402, 569
BspT107I GGYRCC 1 cut(s) 930
BsrDI GCAATG 1 cut(s) 680
BsrFI RCCGGY 1 cut(s) 584
BssAI RCCGGY 1 cut(s) 584
BssECI CCNNGG 6 cut(s) 294, 324, 338, 390, 662, 975
BssMI GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
BssT1I CCWWGG 5 cut(s) 294, 324, 338, 390, 975
Bst2UI CCWGG 2 cut(s) 377, 663
Bst4CI ACNGT 2 cut(s) 751, 1003
Bst6I CTCTTC 1 cut(s) 260
BstC8I GCNNGC 1 cut(s) 433
BstDEI CTNAG 3 cut(s) 40, 163, 468
BstDSI CCRYGG 1 cut(s) 975
BstENI CCTNNNNNAGG 1 cut(s) 660
BstF5I GGATG 3 cut(s) 212, 702, 849
BstKTI GATC 7 cut(s) 271, 347, 353, 397, 478, 542, 577
BstMAI GTCTC 2 cut(s) 9, 65
BstMBI GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
BstMWI GCNNNNNNNGC 3 cut(s) 412, 441, 886
BstNI CCWGG 2 cut(s) 377, 663
BstNSI RCATGY 1 cut(s) 986
BstSCI CCNGG 2 cut(s) 375, 661
BstSFI CTRYAG 4 cut(s) 94, 410, 750, 854
BstV1I GCAGC 4 cut(s) 117, 181, 424, 876
BstV2I GAAGAC 1 cut(s) 926
BstX2I RGATCY 5 cut(s) 268, 350, 394, 475, 539
BstXI CCANNNNNNTGG 1 cut(s) 638
BstYI RGATCY 5 cut(s) 268, 350, 394, 475, 539
BsuI GTATCC 1 cut(s) 504
BsuRI GGCC 1 cut(s) 431
BtgI CCRYGG 1 cut(s) 975
BtrI CACGTC 1 cut(s) 924
BtsCI GGATG 3 cut(s) 212, 702, 849
BtsIMutI CAGTG 1 cut(s) 156
Cac8I GCNNGC 1 cut(s) 433
Cfr10I RCCGGY 1 cut(s) 584
Cfr13I GGNCC 2 cut(s) 873, 909
CseI GACGC 1 cut(s) 395
Csp6I GTAC 2 cut(s) 678, 787
CspAI ACCGGT 1 cut(s) 584
CviAII CATG 4 cut(s) 146, 967, 976, 983
CviQI GTAC 2 cut(s) 678, 787
DdeI CTNAG 3 cut(s) 40, 163, 468
DpnI GATC 7 cut(s) 270, 346, 352, 396, 477, 541, 576
DpnII GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
DraIII CACNNNGTG 1 cut(s) 830
Eam1104I CTCTTC 1 cut(s) 260
EarI CTCTTC 1 cut(s) 260
Eco130I CCWWGG 5 cut(s) 294, 324, 338, 390, 975
Eco147I AGGCCT 1 cut(s) 431
Eco47I GGWCC 2 cut(s) 873, 909
EcoNI CCTNNNNNAGG 1 cut(s) 660
EcoO109I RGGNCCY 1 cut(s) 873
EcoRI GAATTC 1 cut(s) 422
EcoRII CCWGG 2 cut(s) 375, 661
EcoT14I CCWWGG 5 cut(s) 294, 324, 338, 390, 975
EcoT22I ATGCAT 1 cut(s) 904
ErhI CCWWGG 5 cut(s) 294, 324, 338, 390, 975
FaeI CATG 4 cut(s) 149, 970, 979, 986
FaiI YATR 9 cut(s) 147, 464, 600, 639, 736, 804, 968, 977, 984
FaqI GGGAC 2 cut(s) 859, 993
FatI CATG 4 cut(s) 145, 966, 975, 982
FblI GTMKAC 1 cut(s) 320
Fnu4HI GCNGC 4 cut(s) 106, 195, 413, 890
FokI GGATG 3 cut(s) 199, 709, 836
Fsp4HI GCNGC 4 cut(s) 106, 195, 413, 890
FspBI CTAG 5 cut(s) 26, 183, 330, 473, 944
GluI GCNGC 4 cut(s) 106, 195, 413, 890
HaeIII GGCC 1 cut(s) 431
HapII CCGG 2 cut(s) 261, 585
HgaI GACGC 1 cut(s) 395
Hin1II CATG 4 cut(s) 149, 970, 979, 986
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 5 cut(s) 161, 333, 955, 963, 971
HpaI GTTAAC 1 cut(s) 535
HpaII CCGG 2 cut(s) 261, 585
HphI GGTGA 3 cut(s) 620, 651, 982
Hpy166II GTNNAC 2 cut(s) 321, 535
Hpy188I TCNGA 4 cut(s) 43, 75, 166, 370
Hpy188III TCNNGA 4 cut(s) 261, 348, 455, 616
Hpy8I GTNNAC 2 cut(s) 321, 535
Hpy99I CGWCG 1 cut(s) 173
HpyAV CCTTC 3 cut(s) 233, 666, 863
HpyCH4III ACNGT 2 cut(s) 751, 1003
HpyCH4IV ACGT 2 cut(s) 923, 1022
HpyCH4V TGCA 5 cut(s) 149, 412, 444, 806, 902
HpyF10VI GCNNNNNNNGC 3 cut(s) 412, 441, 886
HpyF3I CTNAG 3 cut(s) 40, 163, 468
HpySE526I ACGT 2 cut(s) 923, 1022
Hsp92II CATG 4 cut(s) 149, 970, 979, 986
KflI GGGWCCC 1 cut(s) 873
Kpn2I TCCGGA 1 cut(s) 260
KspAI GTTAAC 1 cut(s) 535
Kzo9I GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
LmnI GCTCC 1 cut(s) 838
Lsp1109I GCAGC 4 cut(s) 117, 181, 424, 876
LweI GCATC 3 cut(s) 687, 889, 911
MaeI CTAG 5 cut(s) 26, 183, 330, 473, 944
MaeII ACGT 2 cut(s) 923, 1022
MaeIII GTNAC 2 cut(s) 382, 1018
MalI GATC 7 cut(s) 270, 346, 352, 396, 477, 541, 576
MboI GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
MboII GAAGA 3 cut(s) 247, 303, 931
MflI RGATCY 5 cut(s) 268, 350, 394, 475, 539
MhlI GDGCHC 1 cut(s) 1008
MluCI AATT 8 cut(s) 64, 69, 173, 364, 422, 527, 557, 810
MlyI GAGTC 3 cut(s) 155, 964, 972
MmeI TCCRAC 2 cut(s) 228, 816
Mph1103I ATGCAT 1 cut(s) 904
MroI TCCGGA 1 cut(s) 260
MroXI GAANNNNTTC 1 cut(s) 655
MseI TTAA 2 cut(s) 534, 884
MspI CCGG 2 cut(s) 261, 585
MspR9I CCNGG 2 cut(s) 377, 663
MvaI CCWGG 2 cut(s) 377, 663
MwoI GCNNNNNNNGC 3 cut(s) 412, 441, 886
NcoI CCATGG 1 cut(s) 975
NdeII GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
NlaIII CATG 4 cut(s) 149, 970, 979, 986
NlaIV GGNNCC 5 cut(s) 396, 874, 875, 910, 932
NmuCI GTSAC 1 cut(s) 382
NsiI ATGCAT 1 cut(s) 904
NspI RCATGY 1 cut(s) 986
PceI AGGCCT 1 cut(s) 431
PciI ACATGT 1 cut(s) 982
PcsI WCGNNNNNNNCGW 1 cut(s) 814
PdmI GAANNNNTTC 1 cut(s) 655
PfeI GAWTC 2 cut(s) 333, 971
Pfl23II CGTACG 1 cut(s) 786
PinAI ACCGGT 1 cut(s) 584
PkrI GCNGC 4 cut(s) 107, 196, 414, 891
PleI GAGTC 3 cut(s) 155, 963, 971
PpsI GAGTC 3 cut(s) 155, 963, 971
PpuMI RGGWCCY 1 cut(s) 873
PscI ACATGT 1 cut(s) 982
Psp5II RGGWCCY 1 cut(s) 873
Psp6I CCWGG 2 cut(s) 375, 661
PspGI CCWGG 2 cut(s) 375, 661
PspLI CGTACG 1 cut(s) 786
PspN4I GGNNCC 5 cut(s) 396, 874, 875, 910, 932
PspPI GGNCC 2 cut(s) 873, 909
PspPPI RGGWCCY 1 cut(s) 873
PstI CTGCAG 1 cut(s) 414
PsuI RGATCY 5 cut(s) 268, 350, 394, 475, 539
RsaI GTAC 2 cut(s) 679, 788
RsaNI GTAC 2 cut(s) 678, 787
SaqAI TTAA 2 cut(s) 534, 884
SatI GCNGC 4 cut(s) 106, 195, 413, 890
Sau3AI GATC 7 cut(s) 268, 344, 350, 394, 475, 539, 574
Sau96I GGNCC 2 cut(s) 873, 909
SchI GAGTC 3 cut(s) 155, 964, 972
ScrFI CCNGG 2 cut(s) 377, 663
SduI GDGCHC 1 cut(s) 1008
SfaNI GCATC 3 cut(s) 687, 889, 911
SfcI CTRYAG 4 cut(s) 94, 410, 750, 854
SinI GGWCC 2 cut(s) 873, 909
SpeI ACTAGT 1 cut(s) 25
Sse9I AATT 8 cut(s) 64, 69, 173, 364, 422, 527, 557, 810
SseBI AGGCCT 1 cut(s) 431
SsiI CCGC 2 cut(s) 606, 880
SspI AATATT 1 cut(s) 708
SspMI CTAG 5 cut(s) 26, 183, 330, 473, 944
StuI AGGCCT 1 cut(s) 431
StyD4I CCNGG 2 cut(s) 375, 661
StyI CCWWGG 5 cut(s) 294, 324, 338, 390, 975
TaaI ACNGT 2 cut(s) 751, 1003
TaiI ACGT 2 cut(s) 926, 1025
TaqI TCGA 3 cut(s) 426, 512, 712
TasI AATT 8 cut(s) 64, 69, 173, 364, 422, 527, 557, 810
TatI WGTACW 1 cut(s) 677
TfiI GAWTC 2 cut(s) 333, 971
Tru1I TTAA 2 cut(s) 534, 884
Tru9I TTAA 2 cut(s) 534, 884
TscAI CASTG 1 cut(s) 163
TseFI GTSAC 1 cut(s) 382
TseI GCWGC 4 cut(s) 105, 194, 412, 889
Tsp45I GTSAC 1 cut(s) 382
TspDTI ATGAA 1 cut(s) 615
TspGWI ACGGA 2 cut(s) 298, 789
TspRI CASTG 1 cut(s) 163
VpaK11BI GGWCC 2 cut(s) 873, 909
XagI CCTNNNNNAGG 1 cut(s) 660
XapI RAATTY 1 cut(s) 422
XceI RCATGY 1 cut(s) 986
XmiI GTMKAC 1 cut(s) 320
XmnI GAANNNNTTC 1 cut(s) 655
XspI CTAG 5 cut(s) 26, 183, 330, 473, 944
Zsp2I ATGCAT 1 cut(s) 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.