SPX and EXS domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g11882 FvH4_6g30062 |
| rosa_chinensis | RchiOBHm_Chr2g0117601 RchiOBHm_Chr2g0126381 RchiOBHm_Chr2g0131431 |
| rosa_multiflora | Rmu_sc0006695.1_g000083 Rmu_sc0038051.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00056080 Rroxscaffold_3G00246990 |
| rosa_samantha | Rh2BG328300 Rh5BG101500 Rh6AG125000 Rh6CG200400 |
| rosa_wichuraiana | Rw0G009450 Rw2G022640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 250 |
| AciI | CCGC | 1 cut(s) | 11 |
| AclWI | GGATC | 1 cut(s) | 59 |
| AcsI | RAATTY | 1 cut(s) | 357 |
| AfaI | GTAC | 1 cut(s) | 179 |
| AgsI | TTSAA | 2 cut(s) | 215, 299 |
| AleI | CACNNNNGTG | 1 cut(s) | 25 |
| AluBI | AGCT | 1 cut(s) | 243 |
| AluI | AGCT | 1 cut(s) | 243 |
| Alw26I | GTCTC | 1 cut(s) | 117 |
| AlwI | GGATC | 1 cut(s) | 59 |
| Aor13HI | TCCGGA | 1 cut(s) | 250 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| ApoI | RAATTY | 1 cut(s) | 357 |
| AsuHPI | GGTGA | 1 cut(s) | 25 |
| BbsI | GAAGAC | 1 cut(s) | 50 |
| BccI | CCATC | 1 cut(s) | 91 |
| BcoDI | GTCTC | 1 cut(s) | 117 |
| BfmI | CTRYAG | 1 cut(s) | 333 |
| BglII | AGATCT | 1 cut(s) | 271 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| BpiI | GAAGAC | 1 cut(s) | 50 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 193, 225 |
| Bsa29I | ATCGAT | 1 cut(s) | 39 |
| BsaJI | CCNNGG | 1 cut(s) | 23 |
| BsaWI | WCCGGW | 1 cut(s) | 250 |
| BseAI | TCCGGA | 1 cut(s) | 250 |
| BseCI | ATCGAT | 1 cut(s) | 39 |
| BseDI | CCNNGG | 1 cut(s) | 23 |
| BseMII | CTCAG | 1 cut(s) | 188 |
| BseRI | GAGGAG | 1 cut(s) | 214 |
| BshVI | ATCGAT | 1 cut(s) | 39 |
| BsiSI | CCGG | 1 cut(s) | 251 |
| BsmAI | GTCTC | 1 cut(s) | 117 |
| Bsp13I | TCCGGA | 1 cut(s) | 250 |
| Bsp143I | GATC | 3 cut(s) | 36, 64, 271 |
| BspACI | CCGC | 1 cut(s) | 11 |
| BspCNI | CTCAG | 1 cut(s) | 189 |
| BspDI | ATCGAT | 1 cut(s) | 39 |
| BspEI | TCCGGA | 1 cut(s) | 250 |
| BspPI | GGATC | 1 cut(s) | 59 |
| BssECI | CCNNGG | 1 cut(s) | 23 |
| BssMI | GATC | 3 cut(s) | 36, 64, 271 |
| BssT1I | CCWWGG | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 1 cut(s) | 216 |
| BstC8I | GCNNGC | 2 cut(s) | 222, 267 |
| BstDEI | CTNAG | 1 cut(s) | 197 |
| BstKTI | GATC | 3 cut(s) | 39, 67, 274 |
| BstMAI | GTCTC | 1 cut(s) | 117 |
| BstMBI | GATC | 3 cut(s) | 36, 64, 271 |
| BstNSI | RCATGY | 1 cut(s) | 269 |
| BstSFI | CTRYAG | 1 cut(s) | 333 |
| BstV2I | GAAGAC | 1 cut(s) | 50 |
| BstX2I | RGATCY | 2 cut(s) | 64, 271 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 27 |
| BstYI | RGATCY | 2 cut(s) | 64, 271 |
| Bsu15I | ATCGAT | 1 cut(s) | 39 |
| BsuTUI | ATCGAT | 1 cut(s) | 39 |
| BtsIMutI | CAGTG | 1 cut(s) | 194 |
| Cac8I | GCNNGC | 2 cut(s) | 222, 267 |
| ClaI | ATCGAT | 1 cut(s) | 39 |
| Csp6I | GTAC | 1 cut(s) | 178 |
| CviAII | CATG | 1 cut(s) | 266 |
| CviJI | RGCY | 2 cut(s) | 8, 243 |
| CviKI_1 | RGCY | 2 cut(s) | 8, 243 |
| CviQI | GTAC | 1 cut(s) | 178 |
| DdeI | CTNAG | 1 cut(s) | 197 |
| DpnI | GATC | 3 cut(s) | 38, 66, 273 |
| DpnII | GATC | 3 cut(s) | 36, 64, 271 |
| Eam1104I | CTCTTC | 1 cut(s) | 216 |
| EarI | CTCTTC | 1 cut(s) | 216 |
| Eco130I | CCWWGG | 1 cut(s) | 23 |
| Eco32I | GATATC | 1 cut(s) | 144 |
| EcoRV | GATATC | 1 cut(s) | 144 |
| EcoT14I | CCWWGG | 1 cut(s) | 23 |
| ErhI | CCWWGG | 1 cut(s) | 23 |
| FaeI | CATG | 1 cut(s) | 269 |
| FaiI | YATR | 6 cut(s) | 257, 267, 327, 329, 335, 352 |
| FatI | CATG | 1 cut(s) | 265 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| GluI | GCNGC | 1 cut(s) | 9 |
| HapII | CCGG | 1 cut(s) | 251 |
| Hin1II | CATG | 1 cut(s) | 269 |
| HinfI | GANTC | 2 cut(s) | 16, 55 |
| HpaII | CCGG | 1 cut(s) | 251 |
| HphI | GGTGA | 1 cut(s) | 25 |
| Hpy166II | GTNNAC | 1 cut(s) | 20 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 141 |
| Hpy188III | TCNNGA | 4 cut(s) | 62, 99, 251, 312 |
| Hpy8I | GTNNAC | 1 cut(s) | 20 |
| HpyCH4V | TGCA | 2 cut(s) | 269, 354 |
| HpyF3I | CTNAG | 1 cut(s) | 197 |
| Hsp92II | CATG | 1 cut(s) | 269 |
| Kpn2I | TCCGGA | 1 cut(s) | 250 |
| Kzo9I | GATC | 3 cut(s) | 36, 64, 271 |
| LpnPI | CCDG | 5 cut(s) | 75, 84, 206, 264, 325 |
| MalI | GATC | 3 cut(s) | 38, 66, 273 |
| MboI | GATC | 3 cut(s) | 36, 64, 271 |
| MboII | GAAGA | 3 cut(s) | 50, 203, 300 |
| MflI | RGATCY | 2 cut(s) | 64, 271 |
| MluCI | AATT | 2 cut(s) | 285, 357 |
| MlyI | GAGTC | 2 cut(s) | 25, 64 |
| MmeI | TCCRAC | 1 cut(s) | 12 |
| MnlI | CCTC | 4 cut(s) | 41, 100, 192, 195 |
| MroI | TCCGGA | 1 cut(s) | 250 |
| MseI | TTAA | 3 cut(s) | 188, 288, 364 |
| MslI | CAYNNNNRTG | 1 cut(s) | 25 |
| MspI | CCGG | 1 cut(s) | 251 |
| NdeII | GATC | 3 cut(s) | 36, 64, 271 |
| NlaIII | CATG | 1 cut(s) | 269 |
| NspI | RCATGY | 1 cut(s) | 269 |
| OliI | CACNNNNGTG | 1 cut(s) | 25 |
| PaeI | GCATGC | 1 cut(s) | 269 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| PleI | GAGTC | 2 cut(s) | 24, 63 |
| PpsI | GAGTC | 2 cut(s) | 24, 63 |
| PsuI | RGATCY | 2 cut(s) | 64, 271 |
| RsaI | GTAC | 1 cut(s) | 179 |
| RsaNI | GTAC | 1 cut(s) | 178 |
| RseI | CAYNNNNRTG | 1 cut(s) | 25 |
| SaqAI | TTAA | 3 cut(s) | 188, 288, 364 |
| SatI | GCNGC | 1 cut(s) | 9 |
| Sau3AI | GATC | 3 cut(s) | 36, 64, 271 |
| SchI | GAGTC | 2 cut(s) | 25, 64 |
| SetI | ASST | 4 cut(s) | 25, 111, 245, 340 |
| SfcI | CTRYAG | 1 cut(s) | 333 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 25 |
| SphI | GCATGC | 1 cut(s) | 269 |
| Sse9I | AATT | 2 cut(s) | 285, 357 |
| SsiI | CCGC | 1 cut(s) | 11 |
| StyI | CCWWGG | 1 cut(s) | 23 |
| TaqI | TCGA | 1 cut(s) | 39 |
| TasI | AATT | 2 cut(s) | 285, 357 |
| Tru1I | TTAA | 3 cut(s) | 188, 288, 364 |
| Tru9I | TTAA | 3 cut(s) | 188, 288, 364 |
| TscAI | CASTG | 1 cut(s) | 201 |
| TseI | GCWGC | 1 cut(s) | 8 |
| TspGWI | ACGGA | 1 cut(s) | 60 |
| TspRI | CASTG | 1 cut(s) | 201 |
| XapI | RAATTY | 1 cut(s) | 357 |
| XceI | RCATGY | 1 cut(s) | 269 |