Rw3G015050

Glycogen recognition site of AMP-activated protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0005701
Physical Location & Seq
Forward (+)
15453801 .. 15458377
4577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G015050.1

Sequence Viewer

Length: 1896 bp
ATGGCCACTCTCTCACAGTTTCCGGCCTTCCCCTCCCTCCTCTCTCCCAAACTCGTCTTCTTCGACCCGCAACAACACCAGCTCAAACTCCGGCGATGCACCGCTCGACATCCACCTTCTCCGGTACACTTCGCGGTTCGCGCTTCTTCGTCCGTCAAGAAATCCAGGTTCACTGAGAAGGTGAAGAGCAATGAGGAGCTTTGCAATGAACTCATGGAGTTTATTGCTGCGGTTGGACTTCCACAAGGTCATGTTCCCTCCATGAAAGAGCTCTCGCAGAACGGAAGGAATGACCTTGCATACATTGTGAGACGGAGGGGATATAAACTTATAAGAGAGCTTCTTGTGGACTCCACGGAATCAGAATCGACGGATGTGGATGGTAATGTGGATAACTTTATAGCTGAAAATGATGATGGTCAGAAAGATATAGTGACAGGTCAGTATCATGAGGTGAATGATGTGGTTGAGGAATTCTCATCCTTGAGTGAAGTTTCAATCTTGGAAAGTAGTTCTGAAGCTTTGGTTACTGATCCAGTTCTGAAACACGATGATGGTGTTGATGTACCTGTGGAATCTTTGGCGGATTCACTTTTGCAGGACACATCCTCAGGTAATTTAGAAGGTCATGGTGAACGGGTGGATAGTATGGAAGGCAATGGTCGTGTGTCAAATGTTCCTATTATTGAGAGTCATGTCAATAGTTCTAAGATTGGTACAGCCTTCAACTCCGACCACCATACGCCAGTAGAAATTTGCACCAATTCATCATTGGATGTACTAGAAGATTTATCCTTACCGACCACCATTCCCATCAAACAAAATGATTCTGATAGTCCAAATATTGGTTGGGATCTGAACTCTGATGGACAACCTAGTGTGCCCATAGAATCTGGGACCCATTGGTCCTCAGATAAAAAGGCCTTACATAGGGACCGGGGTGGGAAGGTTGACAATATGGCTGATGAAGTTGCATTGTCAACCAAAGCTTCAGTTATGGAAGAGGAAGATCATCACTCTAGTTCAGATCTTGAACTAAATCAGAATTCTGATGACGATAGCGATGCACCAGTAAAATATCCAGTGAATTTTTCCTTGGAGGAAAAGGTGACAGAATTTATGCAGAATGGAGACCTGGATGCACTTGAAGATAACATCTATGGTGTATCAATTGAGAGTTATGCTGAAGAAATCAAGAGTAGCAATAAGTTCGGGAATGCTGAAGAAGTTCAACTAAGAACTCCTACTTCAGATTACTCAAAACATATGTTTGATGGAAGTGATGCAACATCTGAGCAAATTTTGTCTCCAACAGCAGTTGACCCCCCTCTTGGTGATGCTACTTCATTAGCTGATTCGCGGAGTACTCTAGCTGACAAGAATTTGGATGTTAAGACAAGTGAAAGGGAGGATCAACATGATATTAGTCATCTCAAGTCCATGCTGCATCAGAAGGAGTTGGAATTGTCTCGGTTGAAAGAACAGATTGAGAAGGAACAGCATGCCTTGTCGGTCTTGCAAGCAAACGCAGAAACAGCAATCAACGAAGCACAAAAGCTTATCTGCGAAAAAGATGCAGAGTTGCTTGCTGCTGAAGAAAACCTTTCAGGACTAGTGGAGGTTGAGATCCAGTTTCATGGTGATGGTGAAATTGTGGAGGTGACCGGTAGCTTCAATGGTTGGCATCATCAGATTAAATTGGATCCACAGCCACCATCCAGTATCATAGACCACTCTGGATCAAGGAAATCCAGGCTGTGGTCAACGATGCTATGGCTTTACCCAGGAGTATATGAGATAAAATTCCTCGTTGATGGCCATTGGAGTATTGATCCTCAAAGAGAAACAGTTACTAGGGGTACAATATGTAATAACATTCTTAGAGTTGACGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AMPK1_CBM

Protein Analysis

631

Amino Acids

69.77

Weight (kDa)

4.64

Isoelectric Point (pI)

47.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMPK1_CBM PF16561 540 - 629 1.8e-15 Glycogen recognition site of AMP-activated protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 332
AasI GACNNNNNNGTC 1 cut(s) 904
AccB7I CCANNNNNTGG 2 cut(s) 845, 1758
AccBSI CCGCTC 1 cut(s) 104
AccII CGCG 3 cut(s) 134, 141, 1360
AciI CCGC 6 cut(s) 68, 102, 134, 230, 584, 1360
AclWI GGATC 8 cut(s) 527, 861, 1419, 1621, 1697, 1710, 1747, 1826
AcoI YGGCCR 2 cut(s) 3, 1816
AcsI RAATTY 8 cut(s) 473, 753, 1045, 1087, 1115, 1299, 1381, 1802
AcuI CTGAAG 6 cut(s) 537, 975, 1206, 1233, 1242, 1614
AfaI GTAC 6 cut(s) 126, 567, 718, 780, 1366, 1861
AfiI CCNNNNNNNGG 4 cut(s) 845, 930, 1331, 1758
AgeI ACCGGT 1 cut(s) 1664
AgsI TTSAA 7 cut(s) 498, 727, 1034, 1148, 1232, 1477, 1675
AhlI ACTAGT 1 cut(s) 1612
AjnI CCWGG 4 cut(s) 164, 1134, 1751, 1783
AjuI GAANNNNNNNTTGG 4 cut(s) 41, 73, 1079, 1111
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 4 cut(s) 304, 1125, 1311, 1473
AlwI GGATC 8 cut(s) 527, 861, 1419, 1621, 1697, 1710, 1747, 1826
AoxI GGCC 4 cut(s) 3, 24, 921, 1816
ApeKI GCWGC 3 cut(s) 227, 1444, 1589
ApoI RAATTY 8 cut(s) 473, 753, 1045, 1087, 1115, 1299, 1381, 1802
AsiGI ACCGGT 1 cut(s) 1664
Asp700I GAANNNNTTC 1 cut(s) 1227
AspLEI GCGC 1 cut(s) 143
AspS9I GGNCC 3 cut(s) 897, 906, 934
AsuC2I CCSGG 1 cut(s) 938
AsuHPI GGTGA 8 cut(s) 193, 466, 644, 1120, 1346, 1652, 1658, 1672
AvaII GGWCC 3 cut(s) 897, 906, 934
AxyI CCTNAGG 1 cut(s) 610
BaeGI GKGCMC 1 cut(s) 885
BalI TGGCCA 2 cut(s) 5, 1818
BamHI GGATCC 1 cut(s) 1702
BanII GRGCYC 1 cut(s) 273
BbsI GAAGAC 1 cut(s) 49
Bbv12I GWGCWC 1 cut(s) 273
BbvI GCAGC 3 cut(s) 214, 1431, 1576
BccI CCATC 9 cut(s) 374, 410, 548, 821, 860, 1268, 1637, 1723, 1808
BcgI CGANNNNNNTGC 6 cut(s) 1046, 1080, 1192, 1226, 1556, 1590
BciT130I CCWGG 4 cut(s) 166, 1136, 1753, 1785
BcnI CCSGG 1 cut(s) 938
BcoDI GTCTC 4 cut(s) 304, 1125, 1311, 1473
BcuI ACTAGT 1 cut(s) 1612
BfaI CTAG 6 cut(s) 782, 876, 1020, 1370, 1613, 1854
BglII AGATCT 1 cut(s) 1027
BisI GCNGC 3 cut(s) 228, 1445, 1590
BlsI GCNGC 3 cut(s) 229, 1446, 1591
BmcAI AGTACT 1 cut(s) 1366
Bme1390I CCNGG 5 cut(s) 166, 938, 1136, 1753, 1785
Bme18I GGWCC 3 cut(s) 897, 906, 934
BmgT120I GGNCC 3 cut(s) 897, 906, 934
BmiI GGNNCC 4 cut(s) 898, 899, 935, 1704
BmrFI CCNGG 5 cut(s) 166, 938, 1136, 1753, 1785
BmsI GCATC 9 cut(s) 86, 1054, 1129, 1273, 1327, 1456, 1564, 1693, 1758
BpiI GAAGAC 1 cut(s) 49
BplI GAGNNNNNCTC 2 cut(s) 461, 493
BpuEI CTTGAG 2 cut(s) 505, 1418
BpuMI CCSGG 1 cut(s) 938
BsaI GGTCTC 1 cut(s) 1125
BsaJI CCNNGG 4 cut(s) 354, 937, 1095, 1783
BsaWI WCCGGW 2 cut(s) 121, 1664
Bsc4I CCNNNNNNNGG 4 cut(s) 845, 930, 1331, 1758
Bse118I RCCGGY 1 cut(s) 1664
Bse1I ACTGG 6 cut(s) 536, 746, 1070, 1082, 1630, 1719
Bse21I CCTNAGG 1 cut(s) 610
Bse3DI GCAATG 3 cut(s) 196, 211, 664
BseBI CCWGG 4 cut(s) 166, 1136, 1753, 1785
BseDI CCNNGG 4 cut(s) 354, 937, 1095, 1783
BseGI GGATG 9 cut(s) 109, 379, 385, 479, 605, 781, 1144, 1393, 1715
BseLI CCNNNNNNNGG 4 cut(s) 845, 930, 1331, 1758
BseMI GCAATG 3 cut(s) 196, 211, 664
BseMII CTCAG 4 cut(s) 165, 624, 924, 1284
BseNI ACTGG 6 cut(s) 536, 746, 1070, 1082, 1630, 1719
BseRI GAGGAG 2 cut(s) 29, 209
BseSI GKGCMC 1 cut(s) 885
BseXI GCAGC 3 cut(s) 214, 1431, 1576
Bsh1236I CGCG 3 cut(s) 134, 141, 1360
BshFI GGCC 4 cut(s) 5, 26, 923, 1818
BshTI ACCGGT 1 cut(s) 1664
BsiHKAI GWGCWC 1 cut(s) 273
BsiSI CCGG 5 cut(s) 23, 91, 122, 937, 1665
BslFI GGGAC 2 cut(s) 910, 947
BslI CCNNNNNNNGG 4 cut(s) 845, 930, 1331, 1758
BsmAI GTCTC 4 cut(s) 304, 1125, 1311, 1473
BsmBI CGTCTC 1 cut(s) 304
BsmFI GGGAC 2 cut(s) 910, 947
BsmI GAATGC 1 cut(s) 1222
BsnI GGCC 4 cut(s) 5, 26, 923, 1818
Bso31I GGTCTC 1 cut(s) 1125
Bsp1286I GDGCHC 2 cut(s) 273, 885
Bsp143I GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
BspACI CCGC 6 cut(s) 68, 102, 134, 230, 584, 1360
BspANI GGCC 4 cut(s) 5, 26, 923, 1818
BspCNI CTCAG 4 cut(s) 166, 623, 923, 1285
BspFNI CGCG 3 cut(s) 134, 141, 1360
BspHI TCATGA 1 cut(s) 448
BspLI GGNNCC 4 cut(s) 898, 899, 935, 1704
BspPI GGATC 8 cut(s) 527, 861, 1419, 1621, 1697, 1710, 1747, 1826
BspQI GCTCTTC 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 1125
BsrBI CCGCTC 1 cut(s) 104
BsrDI GCAATG 3 cut(s) 196, 211, 664
BsrFI RCCGGY 1 cut(s) 1664
BsrI ACTGG 6 cut(s) 536, 746, 1070, 1082, 1630, 1719
BssAI RCCGGY 1 cut(s) 1664
BssECI CCNNGG 4 cut(s) 354, 937, 1095, 1783
BssMI GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
BssT1I CCWWGG 1 cut(s) 1095
Bst2UI CCWGG 4 cut(s) 166, 1136, 1753, 1785
Bst4CI ACNGT 3 cut(s) 18, 1849, 1892
Bst6I CTCTTC 2 cut(s) 179, 996
BstC8I GCNNGC 3 cut(s) 1503, 1521, 1587
BstDEI CTNAG 7 cut(s) 174, 610, 708, 910, 1235, 1293, 1880
BstDSI CCRYGG 1 cut(s) 354
BstEII GGTNACC 1 cut(s) 1660
BstENI CCTNNNNNAGG 1 cut(s) 928
BstF5I GGATG 9 cut(s) 109, 379, 385, 479, 605, 781, 1144, 1393, 1715
BstFNI CGCG 3 cut(s) 134, 141, 1360
BstHHI GCGC 1 cut(s) 143
BstKTI GATC 9 cut(s) 535, 856, 1012, 1030, 1414, 1629, 1705, 1742, 1834
BstMAI GTCTC 4 cut(s) 304, 1125, 1311, 1473
BstMBI GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
BstMWI GCNNNNNNNGC 2 cut(s) 140, 1535
BstNI CCWGG 4 cut(s) 166, 1136, 1753, 1785
BstNSI RCATGY 1 cut(s) 1505
BstPI GGTNACC 1 cut(s) 1660
BstSCI CCNGG 5 cut(s) 164, 936, 1134, 1751, 1783
BstSLI GKGCMC 1 cut(s) 885
BstUI CGCG 3 cut(s) 134, 141, 1360
BstV1I GCAGC 3 cut(s) 214, 1431, 1576
BstV2I GAAGAC 1 cut(s) 49
BstX2I RGATCY 4 cut(s) 853, 1027, 1626, 1702
BstXI CCANNNNNNTGG 1 cut(s) 1637
BstYI RGATCY 4 cut(s) 853, 1027, 1626, 1702
Bsu36I CCTNAGG 1 cut(s) 610
BsuRI GGCC 4 cut(s) 5, 26, 923, 1818
BtgI CCRYGG 1 cut(s) 354
BtgZI GCGATG 2 cut(s) 109, 1077
BtsCI GGATG 9 cut(s) 109, 379, 385, 479, 605, 781, 1144, 1393, 1715
BtsIMutI CAGTG 2 cut(s) 171, 1089
Cac8I GCNNGC 3 cut(s) 1503, 1521, 1587
CciI TCATGA 1 cut(s) 448
CfoI GCGC 1 cut(s) 143
Cfr10I RCCGGY 1 cut(s) 1664
Cfr13I GGNCC 3 cut(s) 897, 906, 934
Csp6I GTAC 6 cut(s) 125, 566, 717, 779, 1365, 1860
CspAI ACCGGT 1 cut(s) 1664
CviQI GTAC 6 cut(s) 125, 566, 717, 779, 1365, 1860
DdeI CTNAG 7 cut(s) 174, 610, 708, 910, 1235, 1293, 1880
DpnI GATC 9 cut(s) 534, 855, 1011, 1029, 1413, 1628, 1704, 1741, 1833
DpnII GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
DrdI GACNNNNNNGTC 1 cut(s) 904
DseDI GACNNNNNNGTC 1 cut(s) 904
EaeI YGGCCR 2 cut(s) 3, 1816
Eam1104I CTCTTC 2 cut(s) 179, 996
EarI CTCTTC 2 cut(s) 179, 996
EciI GGCGGA 1 cut(s) 599
Ecl136II GAGCTC 1 cut(s) 271
Eco130I CCWWGG 1 cut(s) 1095
Eco147I AGGCCT 1 cut(s) 923
Eco24I GRGCYC 1 cut(s) 273
Eco31I GGTCTC 1 cut(s) 1125
Eco47I GGWCC 3 cut(s) 897, 906, 934
Eco53kI GAGCTC 1 cut(s) 271
Eco57I CTGAAG 6 cut(s) 537, 975, 1206, 1233, 1242, 1614
Eco81I CCTNAGG 1 cut(s) 610
Eco91I GGTNACC 1 cut(s) 1660
EcoICRI GAGCTC 1 cut(s) 271
EcoNI CCTNNNNNAGG 1 cut(s) 928
EcoO109I RGGNCCY 1 cut(s) 897
EcoO65I GGTNACC 1 cut(s) 1660
EcoRI GAATTC 2 cut(s) 473, 1045
EcoRII CCWGG 4 cut(s) 164, 1134, 1751, 1783
EcoT14I CCWWGG 1 cut(s) 1095
EcoT38I GRGCYC 1 cut(s) 273
ErhI CCWWGG 1 cut(s) 1095
Esp3I CGTCTC 1 cut(s) 304
FalI AAGNNNNNCTT 2 cut(s) 1587, 1619
FaqI GGGAC 2 cut(s) 910, 947
FauI CCCGC 1 cut(s) 75
FauNDI CATATG 1 cut(s) 1266
Fnu4HI GCNGC 3 cut(s) 228, 1445, 1590
FokI GGATG 9 cut(s) 96, 386, 392, 466, 592, 788, 1151, 1400, 1702
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 3 cut(s) 228, 1445, 1590
FspBI CTAG 6 cut(s) 782, 876, 1020, 1370, 1613, 1854
GlaI GCGC 1 cut(s) 142
GluI GCNGC 3 cut(s) 228, 1445, 1590
HaeIII GGCC 4 cut(s) 5, 26, 923, 1818
HapII CCGG 5 cut(s) 23, 91, 122, 937, 1665
HhaI GCGC 1 cut(s) 143
Hin6I GCGC 1 cut(s) 141
HinP1I GCGC 1 cut(s) 141
HincII GTYRAC 5 cut(s) 952, 981, 1321, 1764, 1888
HindII GTYRAC 5 cut(s) 952, 981, 1321, 1764, 1888
HindIII AAGCTT 3 cut(s) 519, 987, 1556
HinfI GANTC 9 cut(s) 350, 359, 365, 575, 587, 691, 827, 890, 1355
HpaII CCGG 5 cut(s) 23, 91, 122, 937, 1665
HphI GGTGA 8 cut(s) 193, 466, 644, 1120, 1346, 1652, 1658, 1672
Hpy166II GTNNAC 9 cut(s) 127, 171, 349, 635, 952, 981, 1321, 1764, 1888
Hpy188III TCNNGA 7 cut(s) 157, 449, 1031, 1195, 1213, 1608, 1737
Hpy8I GTNNAC 9 cut(s) 127, 171, 349, 635, 952, 981, 1321, 1764, 1888
Hpy99I CGWCG 1 cut(s) 373
HpyCH4III ACNGT 3 cut(s) 18, 1849, 1892
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 1535
HpyF3I CTNAG 7 cut(s) 174, 610, 708, 910, 1235, 1293, 1880
HspAI GCGC 1 cut(s) 141
KflI GGGWCCC 1 cut(s) 897
Kzo9I GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
LguI GCTCTTC 1 cut(s) 179
LmnI GCTCC 1 cut(s) 196
Lsp1109I GCAGC 3 cut(s) 214, 1431, 1576
LweI GCATC 9 cut(s) 86, 1054, 1129, 1273, 1327, 1456, 1564, 1693, 1758
MaeI CTAG 6 cut(s) 782, 876, 1020, 1370, 1613, 1854
MaeIII GTNAC 5 cut(s) 433, 526, 1108, 1660, 1849
MalI GATC 9 cut(s) 534, 855, 1011, 1029, 1413, 1628, 1704, 1741, 1833
MbiI CCGCTC 1 cut(s) 104
MboI GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
MfeI CAATTG 1 cut(s) 1170
MflI RGATCY 4 cut(s) 853, 1027, 1626, 1702
MhlI GDGCHC 2 cut(s) 273, 885
MlsI TGGCCA 2 cut(s) 5, 1818
MluNI TGGCCA 2 cut(s) 5, 1818
MlyI GAGTC 2 cut(s) 344, 700
MmeI TCCRAC 4 cut(s) 214, 756, 1334, 1440
Mox20I TGGCCA 2 cut(s) 5, 1818
MroXI GAANNNNTTC 1 cut(s) 1227
MscI TGGCCA 2 cut(s) 5, 1818
MseI TTAA 3 cut(s) 1392, 1695, 1894
MslI CAYNNNNRTG 2 cut(s) 552, 1641
Msp20I TGGCCA 2 cut(s) 5, 1818
MspI CCGG 5 cut(s) 23, 91, 122, 937, 1665
MspR9I CCNGG 5 cut(s) 166, 938, 1136, 1753, 1785
MunI CAATTG 1 cut(s) 1170
Mva1269I GAATGC 1 cut(s) 1222
MvaI CCWGG 4 cut(s) 166, 1136, 1753, 1785
MvnI CGCG 3 cut(s) 134, 141, 1360
MwoI GCNNNNNNNGC 2 cut(s) 140, 1535
NciI CCSGG 1 cut(s) 938
NdeI CATATG 1 cut(s) 1266
NdeII GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
NlaIV GGNNCC 4 cut(s) 898, 899, 935, 1704
NmuCI GTSAC 3 cut(s) 433, 1108, 1660
NspI RCATGY 1 cut(s) 1505
PaeI GCATGC 1 cut(s) 1505
PagI TCATGA 1 cut(s) 448
PceI AGGCCT 1 cut(s) 923
PciSI GCTCTTC 1 cut(s) 179
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PctI GAATGC 1 cut(s) 1222
PdmI GAANNNNTTC 1 cut(s) 1227
PfeI GAWTC 7 cut(s) 359, 365, 575, 587, 827, 890, 1355
PflMI CCANNNNNTGG 2 cut(s) 845, 1758
PinAI ACCGGT 1 cut(s) 1664
PkrI GCNGC 3 cut(s) 229, 1446, 1591
PleI GAGTC 2 cut(s) 344, 699
PpsI GAGTC 2 cut(s) 344, 699
PpuMI RGGWCCY 1 cut(s) 897
PsiI TTATAA 1 cut(s) 332
Psp124BI GAGCTC 1 cut(s) 273
Psp5II RGGWCCY 1 cut(s) 897
Psp6I CCWGG 4 cut(s) 164, 1134, 1751, 1783
PspEI GGTNACC 1 cut(s) 1660
PspGI CCWGG 4 cut(s) 164, 1134, 1751, 1783
PspN4I GGNNCC 4 cut(s) 898, 899, 935, 1704
PspPI GGNCC 3 cut(s) 897, 906, 934
PspPPI RGGWCCY 1 cut(s) 897
PsuI RGATCY 4 cut(s) 853, 1027, 1626, 1702
RsaI GTAC 6 cut(s) 126, 567, 718, 780, 1366, 1861
RsaNI GTAC 6 cut(s) 125, 566, 717, 779, 1365, 1860
RseI CAYNNNNRTG 2 cut(s) 552, 1641
SacI GAGCTC 1 cut(s) 273
SapI GCTCTTC 1 cut(s) 179
SaqAI TTAA 3 cut(s) 1392, 1695, 1894
SatI GCNGC 3 cut(s) 228, 1445, 1590
Sau3AI GATC 9 cut(s) 532, 853, 1009, 1027, 1411, 1626, 1702, 1739, 1831
Sau96I GGNCC 3 cut(s) 897, 906, 934
ScaI AGTACT 1 cut(s) 1366
SchI GAGTC 2 cut(s) 344, 700
ScrFI CCNGG 5 cut(s) 166, 938, 1136, 1753, 1785
SduI GDGCHC 2 cut(s) 273, 885
SfaNI GCATC 9 cut(s) 86, 1054, 1129, 1273, 1327, 1456, 1564, 1693, 1758
SinI GGWCC 3 cut(s) 897, 906, 934
SmiMI CAYNNNNRTG 2 cut(s) 552, 1641
SmlI CTYRAG 2 cut(s) 484, 1433
SmoI CTYRAG 2 cut(s) 484, 1433
SpeI ACTAGT 1 cut(s) 1612
SphI GCATGC 1 cut(s) 1505
SseBI AGGCCT 1 cut(s) 923
SsiI CCGC 6 cut(s) 68, 102, 134, 230, 584, 1360
SspI AATATT 1 cut(s) 844
SspMI CTAG 6 cut(s) 782, 876, 1020, 1370, 1613, 1854
SstI GAGCTC 1 cut(s) 273
StuI AGGCCT 1 cut(s) 923
StyD4I CCNGG 5 cut(s) 164, 936, 1134, 1751, 1783
StyI CCWWGG 1 cut(s) 1095
TaaI ACNGT 3 cut(s) 18, 1849, 1892
TaqI TCGA 3 cut(s) 63, 106, 368
TaqII GACCGA 1 cut(s) 1501
TatI WGTACW 2 cut(s) 778, 1364
TfiI GAWTC 7 cut(s) 359, 365, 575, 587, 827, 890, 1355
Tru1I TTAA 3 cut(s) 1392, 1695, 1894
Tru9I TTAA 3 cut(s) 1392, 1695, 1894
TscAI CASTG 2 cut(s) 178, 1089
TseFI GTSAC 3 cut(s) 433, 1108, 1660
TseI GCWGC 3 cut(s) 227, 1444, 1589
Tsp45I GTSAC 3 cut(s) 433, 1108, 1660
TspDTI ATGAA 6 cut(s) 222, 278, 756, 981, 1335, 1625
TspGWI ACGGA 5 cut(s) 142, 297, 328, 371, 386
TspRI CASTG 2 cut(s) 178, 1089
Van91I CCANNNNNTGG 2 cut(s) 845, 1758
VpaK11BI GGWCC 3 cut(s) 897, 906, 934
XagI CCTNNNNNAGG 1 cut(s) 928
XapI RAATTY 8 cut(s) 473, 753, 1045, 1087, 1115, 1299, 1381, 1802
XceI RCATGY 1 cut(s) 1505
XcmI CCANNNNNNNNNTGG 2 cut(s) 769, 846
XmnI GAANNNNTTC 1 cut(s) 1227
XspI CTAG 6 cut(s) 782, 876, 1020, 1370, 1613, 1854
ZrmI AGTACT 1 cut(s) 1366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.