AT1G03080

Kinase interacting

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005688
Physical Location & Seq
Reverse (-)
731554 .. 738306
6753 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G03080.3

Sequence Viewer

Length: 5202 bp
ATGACTGCTGTTGTGAATGGTAACTCTAAACGCTATTCTTGGTGGTGGGATAGTCACATAAGCCCCAAGAACTCGAAATGGCTTCAGGAGAATCTTACAGATATGGATAGTAAAGTCAAGCAAATGATCAAGGTTATTGAAGAAGATGCTGACTCTTTTGCTAGGCGAGCGGAAATGTATTACAAGAAGCGGCCTGAGCTTATGAAACTGGTTGAGGAGTTTTATCGAGCATATCGTGCTTTGGCTGAAAGATACGATCATGCCACCGGTGTTATTCGTCATGCTCAGCAGACTATGGCTGAAGCCTTCCCAAACCAAGACCCTATGATGTTTGGTGAGGAGTCACCTCTCGGTTCTTCCACCGATGGTTTTGATCCACAAACGCCTGACAGTTATCCACCTATCCGAGCTCCTGTTTACCCAGATGATTTACGAAAAGGTGCTTTTGGGATTTCTTCCTCTCATTTGAGTACCGTTAAGCGCAATATAGCCTTCATGGAAGACCCTCAGTCTGTGAGTAGCGGGAAAGGTTTTAAAACTGCAAAGGCAAGGAAAGGACTGAATTTCAATAATGTTGATGGAAAAGAAATAAATGCTAAGGTTCTTTCAGAATCTGAACGCGCAAGCAAAGCTGAGGCTGAAATTGTGGCTTTAAAAGATGCTCTTTCTAAAGTGCAGGCTGAAAAGGAAGCTAGCTTAGCTCAGTTTGATCAGAATTTGGAGAAACTGTCTAATTTGGAGTCTGAGGTATCTCGTGCACAAGAGGACTCTAGGGTGCTTATTGAACGAGCCACAAGAGCCGAAGCTGAGGTCGAAACGCTCAGAGAATCCCTCAGCAAAGTAGAGGTTGAAAAGGAGTCCAGCCTTCTTCAGTATCAGCAATGTCTGCAAAACATAGCTGATTTGGAGGATCGCATTTCTCTAGCCCAGAAGGAGGCTGGAGAAGTAGATGAGCGAGCCAACAGAGCCGAAGCTGAAACTCTAGCACTGAAGCAAAGCCTTGTTAGTTCCGAAACTGACAAGGAAGCTGCTCTTGTTCAATATCAACAATGCTTGAAAACCATATCTAACCTGGAAGAGAGGTTGCACAAGGCTGAGGAAGATTCAAGGTTAACCAATCAGCGGGCAGAAAATGCTGAGGGTGAAGTTGAAAGCTTGAAGCAAAAGGTTTCCAAATTAATTGAAGAGAATGAAGCTTACGAACTCCAATACCAACAATGTCTGGACACAATTGCAGATTTAAAGCTCAAGCTGTTTCATGCTCAAGAAGAAACTCAAAGGCTCAGCCGTGAAATAGAGGATGGAGTTGCTAAGTTAAAATTTGCAGAGGAAAAATGTGTTGTGCTTGAGAGATCAAATCAAAATCTTCACTCTGAACTGGATGGTCTACTAGAGAAACTGGGGAATCAAAGTCATGAGCTCACGGAGAAACAGAAAGAGTTGGGAAGATTGTGGACTTGTGTACAAGAAGAAAACTTGCGTTTTATGGAAGCTGAGACTGCCTTTCAAACCCTACAACAGTTACACTCTCAGTCTCAGGAGGAACTAAGCACTTTGGCATTGGAACTGCAAAACAGGTCTCAAATCCTGAAAGATATGGAAGCCCGTAACAATGGTTTACAGGAGGAAGTTCAGGAAGCCAAAGACCAGAGCAAAAGCCTCAATGAGCTCAATCTCTCCTCGGCTGCATCAATTAAAAGTTTGCAGGAGGAGGTCTCAAAATTACGAGAGACAATACAGAAACTTGAGGCAGAAGTTGAACTAAGAGTGGACCAAAGAAATGCTTTGCAGCAAGAAATATACTGTCTTAAAGAGGAATTAAGTCAGATAGGGAAGAAACACCAGTCCATGGTAGAACAGGTGGAATTGGTTGGTTTACATCCAGAAAGCTTTGGGTCTTCTGTCAAGGAGTTACAGGAGGAGAACTCAAAGCTAAAGGAAATCCGGGAAAGAGAAAGTATTGAAAAGACGGCCCTGATTGAGAAGTTAGAAATGATGGAAAAGCTTGTTCAGAAAAACCTTCTTCTGGAGAACTCCATATCAGATTTGAATGCTGAGCTGGAAACAATCAGAGGAAAGCTGAAAACATTGGAGGAAGCTTCTATGTCACTTGCTGAAGAGAAATCAGGCCTTCATTCTGAGAAGGACATGTTGATTTCCCGTCTGCAGAGTGCTACAGAAAACAGCAAGAAACTCTCTGAGGAAAACATGGTACTGGAGAATTCTCTTTTTAATGCCAATGTAGAACTTGAAGAACTCAAGTCGAAATTGAAAAGCCTAGAAGAATCATGCCACCTGCTGAATGATGACAAGACCACTTTAACTAGTGAAAGAGAAAGCCTACTCTCTCATATTGATACAATGAGAAAAAGAATTGAAGATCTGGAGAAAGAACATGCAGAATTAAAAGTGAAAGTTTTGGAATTAGCGACTGAGAGGGAGTCTTCTCTTCAGAAAATTGAAGAGTTGGGAGTGTCTTTAAATGCCAAGGACTGTGAGTATGCTAGTTTTGTGCAATTTTCAGAGAGTCGGATGAATGGCATGGAATCAACGATCCATCACCTTCAAGATGAAAATCAATGCCGGGTGAGAGAATATCAAGTGGAACTGGATCGAGCTCATGATGCTCACATTGAGATTATTGTTCTGCAGAAATGTTTGCAGGACTGGCTTGAGAAGAGTTCCTCTTTGATTGCTGAGAATCAGGATATTAAAGAGGCTTCTAAACTGTTAGAGAAGCTAGTTTCTGAACTAGAAGAGGAAAATATTGGGAAACAAGTGCAGATTGACTCCTCGATTAACTGCATTAAAATACTGAGAACAGGGATCTACCAGGTATTGATGAAGCTTGAAATAATTCCAGGTATAGGTTCCGGTGATGAGAACTCGCGAGACCAGAGAAATATGCATGATATATTGAATAGACTTGAAGACATGCAAACTATGCTTTTGAGCATTCGGGATGAAAACCAGCACTCTGCCATAGAGAACCTCGTCCTTATTGAATTTCTTCGGCAACTTAAATCAGAAGCTGTAGGTATTGAAACAGAGAAGAAAATCCTTGAGGAAGAACTTGAATCTCAGTGTCAGCAGCTCTCGTTTTCGCGGGATGAGACCCAGAAACTTATCTTCGTGAACGGAGAATTGACCACAAAAGTTAATCAAGGAGTCAACAGAGAAAAGGTTTTGATGGTGGAAATTGAGGATTTTCACAGGCAGGTGTTGCAGTTACGAGATGACTACACCATTCTACAGGGAGATAATAACAAAACGTTGGATGAGAAAGCATACTTGACAAAGTCAACATTGCAGTTGGAGGAGGAGAAATGTAAACTAGAAGATGATATCTCTTTGCTTCTGTCGGAGACTATATATCAAAGCAATCTCATCATTCTGTTGGAGGATGTCATCTTGGAAAAGCTTTCAGGAGCAATGAAACTAAACGAGGATCTAGACAGACTCAGTATTGTCAAGTGTAAGCTTGAGGAAGAGGTAAGAGAGCTTGGTGATAAGTTAAAATCTGCAGACATTGCGAACTTTCAGCTTCAAGTTGTGCTAGAGAAATCGAATGCCGAACTACTCTCTGCCAGATCAGCCAATGTTCATTTGGAACATGAAATAGCTAATGTGAAGGTTCAGAAGGAGAAAGAGCTTTTAGAAGCAATGCTGATGATCTCCATCATGCAAAATGAAAAATCTGAATTATCTAAGGCAGTGGAGGGTTTAGAATGTAGATACAAGGAAGCTAAAGCGATAGAAGAGGATAGGGATAAGCAGGTCTTGAGACTCCGTGGAGATTACGATGAGCAGGTTAAGAAGAATAGTCATTCGAACGAAGCTAATCTGAAATTGGAAGCTGACTTGATGAACTTACTCATGGAACTCGAAGAAATCAAAGTGGAGAAGGAAAATCTGAACCAGGAGCTTTTTACAGAAAGGAATGAGATTGAACTATGGGAGTCTCAGTCTGCAACATTGTTTGGAGAGTTGCAGATTTCGGCTGTTCATGAAACATTGCTTGAAGGGTTGACCAATGAGCTGGTCGAAGCATGTAAGAACCTTGAAAGCAGAAGCACGTTAAAAGACAGGGAGATTGAGCAGCTTAAAGGAAGAGTGAACAACTTAGAAGATGCGAACAAAGGACAAAACGATCTTATGTGCAAATACGCCCAAGCTATTTTCCTGTTGAAGGAAAGCATACAATCTCTGGAAAAACATGCAATGCTTCACGAATTCGAGAATGGACCAGCCACAGAAACTGCTTCATTGGTGGATAACAGCGATGGCTTCTTAGAGATACAAGAATTGCATTTGAGAATTAAAGCTATTGAGGAGGCAATAACCAAAAAGCTTGCAATGGAAGAACTAAAAACTTCCTCTGCCCGAAGAAGCAGAAGGAGAAATGGAAGCCTCCGGAAACAGAACCATGAAATCTACTCCGAGGAAACCGAGATGATCACAAAAGATATCGTACTCGATCAGGTTTCTGATTGCTCATCATATGGGATAAGTACGAGAGACATTTTGAAGATAGAAGATGATCACAGTTTAGAGGCAAAGTCACAAAATCCTCCGAAAGGTAAATCCTTGTCTGAAGAGTCATTGGTTGTGGACAAACTAGAGATCTCCGATAGATTCACGGATCCAAACAAAGATGCAAACAAGAGGAAAGTTCTCGAGAGACTTAATTCAGATTTACAGAAGCTCTCAAATCTTCATGTCGCCGTTGAAGATTTGAAAATCAAAGTGGAGACAGAGGAGAAAGACGAGAAAGGAAAAGAAAACGAGTACGAGACGATCAAGGGACAGATCAACGAAGCTGAAGAAGCATTAGAGAAACTGTTAAGCATCAACAGGAAACTGGTGACGAAAGTTCAAAATGGATTTGAAAGATCAGATGGAAGCAAATCATCAATGGATCTTGATGAGAATGAGAGTAGCAGAAGGAGGAGGATATCAGAACAGGCGAGAAGAGGATCAGAGAAGATTGGTAGGTTACAGTTGGAGATACAGAGATTACAGTTTCTGTTACTGAAACTGGAAGGAGATAGAGAGGATCGAGCAAAAGCAAAGATATCGGATAGCAAAACGAGGATTCTTCTTCGGGATTATATCTATAGCGGAGTGAGAGGTGAGCGACGAAAGAGGATTAAAAAGCGGTTTGCGTTTTGTGGGTGCGTGCAACCGCCTCCATCTCCTTGA

Protein Analysis

1733

Amino Acids

198.55

Weight (kDa)

5.01

Isoelectric Point (pI)

51.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 13 - 86 4.6e-38 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2304, 3208
Acc36I ACCTGC 4 cut(s) 2304, 3208, 3766, 3799
AccB7I CCANNNNNTGG 1 cut(s) 1849
AccBSI CCGCTC 1 cut(s) 170
AccI GTMKAC 1 cut(s) 1387
AccII CGCG 3 cut(s) 621, 2890, 3106
AccIII TCCGGA 1 cut(s) 4413
AciI CCGC 8 cut(s) 170, 190, 522, 1123, 3106, 5121, 5158, 5186
AclI AACGTT 1 cut(s) 3272
AcsI RAATTY 6 cut(s) 562, 715, 1319, 2221, 3005, 4232
AcuI CTGAAG 8 cut(s) 68, 321, 854, 1010, 2136, 2435, 4614, 4842
AfaI GTAC 6 cut(s) 472, 1464, 2214, 4473, 4513, 4790
AfiI CCNNNNNNNGG 7 cut(s) 934, 1122, 1849, 2026, 2867, 4189, 4577
AflIII ACRYGT 1 cut(s) 2148
AgeI ACCGGT 1 cut(s) 266
AhdI GACNNNNNGTC 1 cut(s) 508
AhlI ACTAGT 1 cut(s) 2324
AjnI CCWGG 4 cut(s) 1071, 2832, 2860, 3918
Alw21I GWGCWC 5 cut(s) 412, 760, 1422, 1671, 2620
Alw44I GTGCAC 1 cut(s) 756
AlwNI CAGNNNCTG 4 cut(s) 614, 3032, 4259, 5026
Ama87I CYCGRG 1 cut(s) 4676
Aor13HI TCCGGA 1 cut(s) 4413
AoxI GGCC 3 cut(s) 191, 1971, 2128
ApaLI GTGCAC 1 cut(s) 756
ApeKI GCWGC 5 cut(s) 1028, 1685, 1789, 3091, 4099
ApoI RAATTY 6 cut(s) 562, 715, 1319, 2221, 3005, 4232
ArsI GACNNNNNNTTYG 2 cut(s) 795, 827
AseI ATTAAT 1 cut(s) 1178
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 2 cut(s) 2856, 3009
AspLEI GCGC 2 cut(s) 483, 623
AspS9I GGNCC 3 cut(s) 1771, 1972, 4244
AsuC2I CCSGG 2 cut(s) 1946, 2585
AsuHPI GGTGA 9 cut(s) 336, 347, 1154, 2552, 2599, 2888, 3518, 4876, 5144
AsuII TTCGAA 1 cut(s) 3830
AsuNHI GCTAGC 1 cut(s) 692
AvaI CYCGRG 1 cut(s) 4676
AvaII GGWCC 2 cut(s) 1771, 4244
BaeGI GKGCMC 1 cut(s) 760
BamHI GGATCC 1 cut(s) 4642
BanII GRGCYC 4 cut(s) 412, 1422, 1671, 2620
BauI CACGAG 1 cut(s) 753
BbsI GAAGAC 4 cut(s) 507, 1890, 2436, 2937
Bbv12I GWGCWC 5 cut(s) 412, 760, 1422, 1671, 2620
BbvCI CCTCAGC 5 cut(s) 633, 807, 833, 1095, 1137
BbvI GCAGC 5 cut(s) 1015, 1672, 1801, 3103, 4111
BceAI ACGGC 3 cut(s) 1272, 1986, 4709
BcgI CGANNNNNNTGC 2 cut(s) 5058, 5092
BciT130I CCWGG 4 cut(s) 1073, 2834, 2862, 3920
BclI TGATCA 4 cut(s) 126, 709, 4455, 4540
BcnI CCSGG 2 cut(s) 1946, 2585
BcuI ACTAGT 1 cut(s) 2324
BfmI CTRYAG 7 cut(s) 2165, 2175, 2648, 3033, 3251, 3522, 5116
BfuAI ACCTGC 4 cut(s) 2304, 3208, 3766, 3799
BglII AGATCT 2 cut(s) 2380, 4623
BisI GCNGC 6 cut(s) 191, 1029, 1686, 1790, 3092, 4100
BlpI GCTNAGC 4 cut(s) 285, 697, 1283, 2055
BlsI GCNGC 6 cut(s) 192, 1030, 1687, 1791, 3093, 4101
Bme1390I CCNGG 6 cut(s) 1073, 1946, 2585, 2834, 2862, 3920
Bme18I GGWCC 2 cut(s) 1771, 4244
BmeRI GACNNNNNGTC 1 cut(s) 508
BmeT110I CYCGRG 1 cut(s) 4676
BmgT120I GGNCC 3 cut(s) 1771, 1972, 4244
BmiI GGNNCC 2 cut(s) 2872, 4644
BmrFI CCNGG 6 cut(s) 1073, 1946, 2585, 2834, 2862, 3920
BmrI ACTGGG 1 cut(s) 1409
BmsI GCATC 7 cut(s) 136, 649, 1697, 2614, 4120, 4645, 4857
BmtI GCTAGC 1 cut(s) 696
BmuI ACTGGG 1 cut(s) 1409
BpiI GAAGAC 4 cut(s) 507, 1890, 2436, 2937
BplI GAGNNNNNCTC 6 cut(s) 816, 848, 1700, 1732, 1910, 1942
BpmI CTGGAG 4 cut(s) 960, 2048, 2237, 2405
Bpu10I CCTNAGC 7 cut(s) 195, 597, 633, 807, 833, 1095, 1137
Bpu1102I GCTNAGC 4 cut(s) 285, 697, 1283, 2055
Bpu14I TTCGAA 1 cut(s) 3830
BpuEI CTTGAG 9 cut(s) 1232, 1248, 1367, 1766, 2243, 2693, 3083, 3503, 3802
BpuMI CCSGG 2 cut(s) 1946, 2585
BsaBI GATNNNNATC 2 cut(s) 2574, 3677
BsaI GGTCTC 4 cut(s) 1584, 1720, 2886, 3107
BsaJI CCNNGG 5 cut(s) 1680, 1848, 2487, 3790, 4440
BsaWI WCCGGW 3 cut(s) 266, 2873, 4413
BsaXI ACNNNNNCTCC 4 cut(s) 713, 743, 3950, 3980
Bsc4I CCNNNNNNNGG 7 cut(s) 934, 1122, 1849, 2026, 2867, 4189, 4577
Bse118I RCCGGY 1 cut(s) 266
Bse1I ACTGG 9 cut(s) 213, 1383, 1404, 1843, 2220, 2613, 2672, 4866, 5043
Bse3DI GCAATG 8 cut(s) 887, 3305, 3438, 3528, 3669, 4013, 4227, 4362
Bse8I GATNNNNATC 2 cut(s) 2574, 3677
BseAI TCCGGA 1 cut(s) 4413
BseBI CCWGG 4 cut(s) 1073, 2834, 2862, 3920
BseDI CCNNGG 5 cut(s) 1680, 1848, 2487, 3790, 4440
BseGI GGATG 8 cut(s) 1306, 1387, 1879, 2538, 2968, 3115, 3283, 3409
BseJI GATNNNNATC 2 cut(s) 2574, 3677
BseLI CCNNNNNNNGG 7 cut(s) 934, 1122, 1849, 2026, 2867, 4189, 4577
BseMI GCAATG 8 cut(s) 887, 3305, 3438, 3528, 3669, 4013, 4227, 4362
BseNI ACTGG 9 cut(s) 213, 1383, 1404, 1843, 2220, 2613, 2672, 4866, 5043
BseSI GKGCMC 1 cut(s) 760
BseXI GCAGC 5 cut(s) 1015, 1672, 1801, 3103, 4111
BsgI GTGCAG 2 cut(s) 695, 2801
Bsh1236I CGCG 3 cut(s) 621, 2890, 3106
BshFI GGCC 3 cut(s) 193, 1973, 2130
BshTI ACCGGT 1 cut(s) 266
BsiHKAI GWGCWC 5 cut(s) 412, 760, 1422, 1671, 2620
BsiHKCI CYCGRG 1 cut(s) 4676
BsiSI CCGG 5 cut(s) 267, 1945, 2584, 2874, 4414
BslFI GGGAC 1 cut(s) 4818
BslI CCNNNNNNNGG 7 cut(s) 934, 1122, 1849, 2026, 2867, 4189, 4577
BsmBI CGTCTC 1 cut(s) 4787
BsmFI GGGAC 1 cut(s) 4818
BsmI GAATGC 3 cut(s) 2056, 2955, 3574
BsnI GGCC 3 cut(s) 193, 1973, 2130
Bso31I GGTCTC 4 cut(s) 1584, 1720, 2886, 3107
BsoBI CYCGRG 1 cut(s) 4676
Bsp119I TTCGAA 1 cut(s) 3830
Bsp1286I GDGCHC 5 cut(s) 412, 760, 1422, 1671, 2620
Bsp13I TCCGGA 1 cut(s) 4413
Bsp1407I TGTACA 1 cut(s) 1462
Bsp1720I GCTNAGC 4 cut(s) 285, 697, 1283, 2055
Bsp19I CCATGG 1 cut(s) 1848
Bsp68I TCGCGA 1 cut(s) 2890
BspACI CCGC 8 cut(s) 170, 190, 522, 1123, 3106, 5121, 5158, 5186
BspANI GGCC 3 cut(s) 193, 1973, 2130
BspEI TCCGGA 1 cut(s) 4413
BspFNI CGCG 3 cut(s) 621, 2890, 3106
BspHI TCATGA 3 cut(s) 1414, 2620, 4006
BspLI GGNNCC 2 cut(s) 2872, 4644
BspMAI CTGCAG 3 cut(s) 2169, 2652, 3526
BspMI ACCTGC 4 cut(s) 2304, 3208, 3766, 3799
BspOI GCTAGC 1 cut(s) 696
BspT104I TTCGAA 1 cut(s) 3830
BspTNI GGTCTC 4 cut(s) 1584, 1720, 2886, 3107
BsrBI CCGCTC 1 cut(s) 170
BsrDI GCAATG 8 cut(s) 887, 3305, 3438, 3528, 3669, 4013, 4227, 4362
BsrFI RCCGGY 1 cut(s) 266
BsrGI TGTACA 1 cut(s) 1462
BsrI ACTGG 9 cut(s) 213, 1383, 1404, 1843, 2220, 2613, 2672, 4866, 5043
BssAI RCCGGY 1 cut(s) 266
BssECI CCNNGG 5 cut(s) 1680, 1848, 2487, 3790, 4440
BssSI CACGAG 1 cut(s) 753
BssT1I CCWWGG 2 cut(s) 1848, 2487
Bst2BI CACGAG 1 cut(s) 753
Bst2UI CCWGG 4 cut(s) 1073, 2834, 2862, 3920
BstAPI GCANNNNNTGC 6 cut(s) 236, 886, 1133, 2944, 3223, 3530
BstAUI TGTACA 1 cut(s) 1462
BstBI TTCGAA 1 cut(s) 3830
BstC8I GCNNGC 8 cut(s) 168, 625, 678, 694, 957, 1125, 4353, 5180
BstDSI CCRYGG 2 cut(s) 1848, 3790
BstENI CCTNNNNNAGG 2 cut(s) 4187, 4575
BstF5I GGATG 8 cut(s) 1306, 1387, 1879, 2538, 2968, 3115, 3283, 3409
BstFNI CGCG 3 cut(s) 621, 2890, 3106
BstHHI GCGC 2 cut(s) 483, 623
BstNI CCWGG 4 cut(s) 1073, 2834, 2862, 3920
BstNSI RCATGY 5 cut(s) 2152, 2399, 2938, 4053, 4220
BstSCI CCNGG 6 cut(s) 1071, 1944, 2583, 2832, 2860, 3918
BstSFI CTRYAG 7 cut(s) 2165, 2175, 2648, 3033, 3251, 3522, 5116
BstSLI GKGCMC 1 cut(s) 760
BstUI CGCG 3 cut(s) 621, 2890, 3106
BstV1I GCAGC 5 cut(s) 1015, 1672, 1801, 3103, 4111
BstV2I GAAGAC 4 cut(s) 507, 1890, 2436, 2937
BstX2I RGATCY 6 cut(s) 2380, 2826, 3448, 4623, 4642, 4918
BstXI CCANNNNNNTGG 1 cut(s) 4039
BstYI RGATCY 6 cut(s) 2380, 2826, 3448, 4623, 4642, 4918
BsuRI GGCC 3 cut(s) 193, 1973, 2130
BtgI CCRYGG 2 cut(s) 1848, 3790
BtgZI GCGATG 1 cut(s) 4296
BtsCI GGATG 8 cut(s) 1306, 1387, 1879, 2538, 2968, 3115, 3283, 3409
BtsI GCAGTG 1 cut(s) 3720
BtsIMutI CAGTG 3 cut(s) 986, 3089, 3720
BtuMI TCGCGA 1 cut(s) 2890
BveI ACCTGC 4 cut(s) 2304, 3208, 3766, 3799
Cac8I GCNNGC 8 cut(s) 168, 625, 678, 694, 957, 1125, 4353, 5180
CaiI CAGNNNCTG 4 cut(s) 614, 3032, 4259, 5026
CciI TCATGA 3 cut(s) 1414, 2620, 4006
CfoI GCGC 2 cut(s) 483, 623
Cfr10I RCCGGY 1 cut(s) 266
Cfr13I GGNCC 3 cut(s) 1771, 1972, 4244
CsiI ACCWGGT 1 cut(s) 2832
Csp6I GTAC 6 cut(s) 471, 1463, 2213, 4472, 4512, 4789
CspAI ACCGGT 1 cut(s) 266
CviQI GTAC 6 cut(s) 471, 1463, 2213, 4472, 4512, 4789
DraI TTTAAA 4 cut(s) 535, 654, 1242, 2481
DriI GACNNNNNGTC 1 cut(s) 508
Eam1105I GACNNNNNGTC 1 cut(s) 508
Ecl136II GAGCTC 4 cut(s) 410, 1420, 1669, 2618
Eco130I CCWWGG 2 cut(s) 1848, 2487
Eco147I AGGCCT 1 cut(s) 2130
Eco24I GRGCYC 4 cut(s) 412, 1422, 1671, 2620
Eco31I GGTCTC 4 cut(s) 1584, 1720, 2886, 3107
Eco32I GATATC 4 cut(s) 3346, 4468, 4956, 5076
Eco47I GGWCC 2 cut(s) 1771, 4244
Eco53kI GAGCTC 4 cut(s) 410, 1420, 1669, 2618
Eco57I CTGAAG 8 cut(s) 68, 321, 854, 1010, 2136, 2435, 4614, 4842
Eco88I CYCGRG 1 cut(s) 4676
EcoICRI GAGCTC 4 cut(s) 410, 1420, 1669, 2618
EcoNI CCTNNNNNAGG 2 cut(s) 4187, 4575
EcoRI GAATTC 2 cut(s) 2221, 4232
EcoRII CCWGG 4 cut(s) 1071, 2832, 2860, 3918
EcoRV GATATC 4 cut(s) 3346, 4468, 4956, 5076
EcoT14I CCWWGG 2 cut(s) 1848, 2487
EcoT22I ATGCAT 1 cut(s) 2910
EcoT38I GRGCYC 4 cut(s) 412, 1422, 1671, 2620
ErhI CCWWGG 2 cut(s) 1848, 2487
Esp3I CGTCTC 1 cut(s) 4787
FalI AAGNNNNNCTT 8 cut(s) 648, 680, 1017, 1049, 1768, 1800, 3764, 3796
FaqI GGGAC 1 cut(s) 4818
FauI CCCGC 3 cut(s) 515, 1116, 3099
FauNDI CATATG 1 cut(s) 4501
FbaI TGATCA 4 cut(s) 126, 709, 4455, 4540
FblI GTMKAC 1 cut(s) 1387
Fnu4HI GCNGC 6 cut(s) 191, 1029, 1686, 1790, 3092, 4100
FokI GGATG 8 cut(s) 1313, 1394, 1866, 2545, 2975, 3122, 3290, 3416
FriOI GRGCYC 4 cut(s) 412, 1422, 1671, 2620
Fsp4HI GCNGC 6 cut(s) 191, 1029, 1686, 1790, 3092, 4100
GlaI GCGC 2 cut(s) 482, 622
GluI GCNGC 6 cut(s) 191, 1029, 1686, 1790, 3092, 4100
GsuI CTGGAG 4 cut(s) 960, 2048, 2237, 2405
HaeIII GGCC 3 cut(s) 193, 1973, 2130
HapII CCGG 5 cut(s) 267, 1945, 2584, 2874, 4414
HhaI GCGC 2 cut(s) 483, 623
Hin6I GCGC 2 cut(s) 481, 621
HinP1I GCGC 2 cut(s) 481, 621
HincII GTYRAC 4 cut(s) 1113, 3172, 3303, 4029
HindII GTYRAC 4 cut(s) 1113, 3172, 3303, 4029
HindIII AAGCTT 9 cut(s) 1153, 1194, 1888, 2003, 2097, 2846, 3419, 3479, 4349
HpaI GTTAAC 1 cut(s) 1113
HpaII CCGG 5 cut(s) 267, 1945, 2584, 2874, 4414
HphI GGTGA 9 cut(s) 336, 347, 1154, 2552, 2599, 2888, 3518, 4876, 5144
Hpy99I CGWCG 1 cut(s) 5142
HpyCH4IV ACGT 2 cut(s) 3272, 4076
HpySE526I ACGT 2 cut(s) 3272, 4076
HspAI GCGC 2 cut(s) 481, 621
Kpn2I TCCGGA 1 cut(s) 4413
Ksp22I TGATCA 4 cut(s) 126, 709, 4455, 4540
KspAI GTTAAC 1 cut(s) 1113
LmnI GCTCC 3 cut(s) 415, 3428, 3922
Lsp1109I GCAGC 5 cut(s) 1015, 1672, 1801, 3103, 4111
LweI GCATC 7 cut(s) 136, 649, 1697, 2614, 4120, 4645, 4857
MabI ACCWGGT 1 cut(s) 2832
MaeII ACGT 2 cut(s) 3272, 4076
MbiI CCGCTC 1 cut(s) 170
MfeI CAATTG 1 cut(s) 1230
MflI RGATCY 6 cut(s) 2380, 2826, 3448, 4623, 4642, 4918
MhlI GDGCHC 5 cut(s) 412, 760, 1422, 1671, 2620
MmeI TCCRAC 6 cut(s) 2510, 3255, 3294, 3342, 3378, 4983
Mph1103I ATGCAT 1 cut(s) 2910
MroI TCCGGA 1 cut(s) 4413
MroXI GAANNNNTTC 2 cut(s) 2856, 3009
MspA1I CMGCKG 1 cut(s) 1123
MspI CCGG 5 cut(s) 267, 1945, 2584, 2874, 4414
MspR9I CCNGG 6 cut(s) 1073, 1946, 2585, 2834, 2862, 3920
MunI CAATTG 1 cut(s) 1230
Mva1269I GAATGC 3 cut(s) 2056, 2955, 3574
MvaI CCWGG 4 cut(s) 1073, 2834, 2862, 3920
MvnI CGCG 3 cut(s) 621, 2890, 3106
NciI CCSGG 2 cut(s) 1946, 2585
NcoI CCATGG 1 cut(s) 1848
NdeI CATATG 1 cut(s) 4501
NheI GCTAGC 1 cut(s) 692
NlaIV GGNNCC 2 cut(s) 2872, 4644
NmeAIII GCCGAG 1 cut(s) 1661
NmuCI GTSAC 5 cut(s) 53, 342, 2106, 4560, 4864
NruI TCGCGA 1 cut(s) 2890
NsiI ATGCAT 1 cut(s) 2910
NspI RCATGY 5 cut(s) 2152, 2399, 2938, 4053, 4220
NspV TTCGAA 1 cut(s) 3830
PaeR7I CTCGAG 1 cut(s) 4676
PagI TCATGA 3 cut(s) 1414, 2620, 4006
PaqCI CACCTGC 2 cut(s) 2304, 3208
PceI AGGCCT 1 cut(s) 2130
PciI ACATGT 1 cut(s) 2148
PcsI WCGNNNNNNNCGW 1 cut(s) 232
PctI GAATGC 3 cut(s) 2056, 2955, 3574
PdmI GAANNNNTTC 2 cut(s) 2856, 3009
PflFI GACNNNGTC 1 cut(s) 3298
PflMI CCANNNNNTGG 1 cut(s) 1849
PfoI TCCNGGA 1 cut(s) 1944
PinAI ACCGGT 1 cut(s) 266
PkrI GCNGC 6 cut(s) 192, 1030, 1687, 1791, 3093, 4101
PscI ACATGT 1 cut(s) 2148
PshBI ATTAAT 1 cut(s) 1178
Psp124BI GAGCTC 4 cut(s) 412, 1422, 1671, 2620
Psp1406I AACGTT 1 cut(s) 3272
Psp6I CCWGG 4 cut(s) 1071, 2832, 2860, 3918
PspGI CCWGG 4 cut(s) 1071, 2832, 2860, 3918
PspN4I GGNNCC 2 cut(s) 2872, 4644
PspPI GGNCC 3 cut(s) 1771, 1972, 4244
PstI CTGCAG 3 cut(s) 2169, 2652, 3526
PstNI CAGNNNCTG 4 cut(s) 614, 3032, 4259, 5026
PsuI RGATCY 6 cut(s) 2380, 2826, 3448, 4623, 4642, 4918
PsyI GACNNNGTC 1 cut(s) 3298
RruI TCGCGA 1 cut(s) 2890
RsaI GTAC 6 cut(s) 472, 1464, 2214, 4473, 4513, 4790
RsaNI GTAC 6 cut(s) 471, 1463, 2213, 4472, 4512, 4789
SacI GAGCTC 4 cut(s) 412, 1422, 1671, 2620
SatI GCNGC 6 cut(s) 191, 1029, 1686, 1790, 3092, 4100
Sau96I GGNCC 3 cut(s) 1771, 1972, 4244
ScrFI CCNGG 6 cut(s) 1073, 1946, 2585, 2834, 2862, 3920
SduI GDGCHC 5 cut(s) 412, 760, 1422, 1671, 2620
SexAI ACCWGGT 1 cut(s) 2832
SfaNI GCATC 7 cut(s) 136, 649, 1697, 2614, 4120, 4645, 4857
SfcI CTRYAG 7 cut(s) 2165, 2175, 2648, 3033, 3251, 3522, 5116
Sfr274I CTCGAG 1 cut(s) 4676
SfuI TTCGAA 1 cut(s) 3830
SgrAI CRCCGGYG 1 cut(s) 266
SinI GGWCC 2 cut(s) 1771, 4244
SlaI CTCGAG 1 cut(s) 4676
SpeI ACTAGT 1 cut(s) 2324
SseBI AGGCCT 1 cut(s) 2130
SsiI CCGC 8 cut(s) 170, 190, 522, 1123, 3106, 5121, 5158, 5186
SspI AATATT 1 cut(s) 2767
SstI GAGCTC 4 cut(s) 412, 1422, 1671, 2620
StuI AGGCCT 1 cut(s) 2130
StyD4I CCNGG 6 cut(s) 1071, 1944, 2583, 2832, 2860, 3918
StyI CCWWGG 2 cut(s) 1848, 2487
TaiI ACGT 2 cut(s) 3275, 4079
TatI WGTACW 1 cut(s) 1462
TauI GCSGC 1 cut(s) 193
TscAI CASTG 3 cut(s) 993, 3089, 3720
TseFI GTSAC 5 cut(s) 53, 342, 2106, 4560, 4864
TseI GCWGC 5 cut(s) 1028, 1685, 1789, 3091, 4099
Tsp45I GTSAC 5 cut(s) 53, 342, 2106, 4560, 4864
TspGWI ACGGA 4 cut(s) 1439, 3153, 3779, 4655
TspRI CASTG 3 cut(s) 993, 3089, 3720
Tth111I GACNNNGTC 1 cut(s) 3298
Van91I CCANNNNNTGG 1 cut(s) 1849
VneI GTGCAC 1 cut(s) 756
VpaK11BI GGWCC 2 cut(s) 1771, 4244
VspI ATTAAT 1 cut(s) 1178
XagI CCTNNNNNAGG 2 cut(s) 4187, 4575
XapI RAATTY 6 cut(s) 562, 715, 1319, 2221, 3005, 4232
XbaI TCTAGA 1 cut(s) 3451
XceI RCATGY 5 cut(s) 2152, 2399, 2938, 4053, 4220
XcmI CCANNNNNNNNNTGG 3 cut(s) 935, 1069, 3604
XhoI CTCGAG 1 cut(s) 4676
XmiI GTMKAC 1 cut(s) 1387
XmnI GAANNNNTTC 2 cut(s) 2856, 3009
Zsp2I ATGCAT 1 cut(s) 2910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.