Rw6G027910

KIP1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0005688
Physical Location & Seq
Reverse (-)
51872467 .. 51878823
6357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G027910.1

Sequence Viewer

Length: 4899 bp
ATGGCTACTGTGTCCCAAGCAGATTCTAGACGCATGTATTCTTGGTGGTGGGACAGCCACATAAGCCCAAAGAACTCGAGATGGCTGAAGGAAAATCTTACAGATATGGATGCCAAAGTCAAACACATGATCAAACTCATTGAAGAAGATGCAGATTCCTTTGCTAGAAGGGCAGAAATGTATTACAAAAAACGCCCAGAACTAATGAAATTGGTTGAAGAGTTCTACCGAGCATACCGTGCGTTAGCTGAAAGATATGATCATGCAACTGGGGCACTGCGCCAGGCTCATCGAACCATGGCAGAGGCATTTCCCAACCAAGTTCCGTTTGTAGATGACTCACCTGCAGGTTCTTCTGCTAGTGAGACTGATCCCCGAACACCTGAGATGCCAGCTCCTATACGAGCATTATTTGACCTTGATGAATTGCAAAAGGATGCTCTGGGACTCTCCTCCTCAACCCATTTCCATGCTCTCAAAAGGAATGGAGCTTTTAGTGAAGAATCTGACTCTGGAACCAGCCGAATTGGTTTGAAACAGCTGAATGATCTCCTTGGATCGGGAGAAGTAAGGGCGAAAAAGGGCCTCAACTTCCTTGATGCTGACGCAAAAGAACACAGCATGCAGAGCAATGGCCATGATCTTAAAAATCGAGCCTTGTTGGGGGATGATCGAGTGGGCAAAGCAGAGACAGAAATATCAAACTTAAAGAAAGCTCTTGCTAAACTAGAAGCTGAAAAGGAAGCTGGCTTGCTTCAGTACCAAGAGTGTTTGGAGAGAGTATCTAATTTGGAGTCTGAAGTCTCTCGTGCACAAGAGGATTCCAGGGGACTTAATGAACGAGCCAGTAAAGCTGAAGCTGAAGTTCAAACTACAAAGGAAGCACTTAACAAATTAGAGGCTGAAAGGGAAGCTAGTCTTCTTCAGTATCAGGAGTGCTTGGACAAAATCTCTAATCTGGAAAGCATCATCTCTTGTGCCCAAAAGGATGCTGGAGAGCTAAATGATCGAGCTAGTAGAGCTGAATTTGCATCTGAATCTCTACAGAAAGATCTTGAAAGGGTGGCATCTGAGAAAGAAGCTGCACTTGCACAATACGAACAGTGTATGGAGAATATATCAAATCTGGAGGACAAACTACTGCAAGTTGAGGAGGATGCCAAGAGGATTAACGAGCGTGCTTTTAAAGCTGAACTCGAAGTTGAATCCTTGAAGCAAGCAATTGCCAATTTAACTGAAGAGAAGGAAGCTGCTGCTCTCCGGTACAAGCAATGCCTGGAAATGATATCTAATCTTGAGCATAAGATCTCTCATGCGGAGGAGGAGGCACTACGGCTACACTCTCAGATAGACGACGGAATTGCGAGGTTAAAGGATTCGGAAGAAAAGTGTCTTCTGCTGGTAAACTCAAATCAGAATCTGCAGTCGGAGTTGGAGTCTGTGGTGAAGCAAATGCAATCTCAAGGTGAAGAGCTTACAGAGAAGCAGAAGGAGTTGGGTAGACTTTGGGCTTGCATACAAGAAGAGCGGTTGCGATTTATGGAGGCTGAAACTGCTTTCCAGACACTGCAGCATTTGCATTCCCAGTCCCAGGAGGAACTTAGATCTCTTGTAGCTGAGCTCCAGAATAGAGATTTGATTCTGAAGGACATGGAAGCACGAAGTCAGAGTTTGGATGATGAAGTCCAGAAGGTGAAGGAGGAAAACAAGAGCCTAAGTGAGATCAATTTGTCTTCATCTCTTTCAATAAAAGATCTGCAAGCAAGAGATTACTGTCTGAAAGAGGAACTCAATGACCTGAACAAGAAACACCAAGCTATGCTAGAGCAGGTGGAGTCAGTTGGCTTGGATCCAGTGTGCATCGGGTCATCTGTGAAGGAGTTGCAAGATGAGAACTTACAGCTCAAACAAACATGTGAGGCTGATAAAAGTGAGAAAGTGGCACTGTTGGAAAAGTTGGAAATCATGCAGAAACTTCGGGAGAAAAATGTTCTTTTGGAGAATTGCCTTTCTGATTTGAATGTTGAGTTAGAAGGGGTTAGAGGGAAGGTAAAGGAGTTGGAACAATCATGTCAGTCTCTTCTGGCAGAAAAAGGTACTCTTCTTGCTGAAAATGACACTCTGATTTCCCAGTTGCAGATTATGACTGAGAATTTAGAAAAATCATCAGAGAAGAACAAATTTTTGGAGAATTCTCTGTTTGATACGAATGCTGAACTGGAAGGCTTGAGTGTAAAATCAAAGAGCTTAGAAGAATCATGCCTAATGATAAGACTGTTGGCTGAAATGGAACTGAAGATCTCTCATCTCCAAGCAGAAGGGATATCGTCAAAAGCTTTTGGGGCATCTGCAATGTCAGAGAAGTTGATTTCTGTCCTAGAGCGTGGCAAACTTGAACAACAGAAGGAAATCAAGTCATTGTTTGTGCTAATTAAAGCACTGAGAATGGGGCTGTATCAGGTGTTGAAGAATGTTGACATTGATGCAAACCTTGGGTGTGCAGAAAAGGATGAGCAAGACCAAGCACTCCTTAATCATATACTTATCAAACTTCAAGACAAACAAAATTCTTTCTCTGAAAGTTGTGATGAAAACCAGCGGTTGCTTATTGAGAACTCTGTTCTAATAGCAATGCTTGCCCAAATGAAACTAGAGGCGGACTGTTTTATGAGAGAAAGAAACACTCTTGACCATGAGTTCAGGACCCAGTCTGAGAAGTTCTTGGTGTTGCAGAGTGGCGCCCAAAGACTTAGTGACATGAATGCAGAATTGAATTTGAAGGTAGTGGAGGGAGAACACAGAGAGGTAGTTTTGAGGACTGAAATAGATAATCTGCACGAGCAGTTGCTGGACTTGCAAAGCATTTACAAGAGTCTACAAAAAGAAAATTCCCAGATGGTTGAAGATGAGGGATCCTTGAAAAGGACGGTCTTGAATTTGGAGGAAGAGGCGCGTCGTAACCTAGAAGAGGATAAATGCGTCATGTTTGCTGAAACAATATATTATAGTAACCTCTCCCTCATTTTCGATGATATTATTTCCCAAAAGCAACTGGAACTGGAAGAGCTCAGTCACAATTATGATGAACTTCATCTTGGCAATAATGACCTAAAAGAGAAGATGGAAAACTTACATCTCAAGGAGTCATTCAATAAGTCAGAGGATGAGCTGAAAATGGTGAAATCTGTGAATGATCAATTGAATGGTGATATTGCAAATGCAAAGGATGGTTTGTCTCAAAAGGAAAATGAGCTTTTGGAAGCCAGGCAGATCGTAAATGAACTACAGAATGAGAAAAAAGAGCTGTATATACTGGTGGAGGATTTGACTAGTAAAAGTGATCATGTGAAGGTGGTGCTGGAAGATCAAGATAAGCAAATTTTCAAACTACATGACGACAATGACCGTCATAGTAAAGAGATTGGATGCCTCCGTGAAGTGAATCAGAAGTTGGAGGTGGAACTATCGAAATTGCATGAAGAAGCTGAAAAAGCCAAAATTGAGGAGGAAAGGTTGGTCAGTGAACTAAAAAGGGGAAGAGAGGAGATAGAAATGTGGGTGACTCACGCAGCCACCCTCTTTGGAGAACTGCAGATCTCCTCCATTCGTGAAACATTGTTTGAAGGAAAGATCCGTGAGCTCATTGAAGCCTGTCAGATCCTTGAAGACAAAAGCGTTTCCAAAGGTCTGGAGAGTGAACAGATGAAAGAAAGAGTCGGCACATTGGAACATGAAAATGGAGAGCTACAAGCTCAGTTGGCTGCCTATATTCCAGCTGTCATCTCTCTGAATGAGTGTACAACAGCCCTTGAGAATCATTCACTTATTAACACCAGATGTCATAAACTTGACACTGAAGCCTCAGAGGATGCCCTTCTGCAAGCTGAGAGCTCTCAAACGGATGGACATCAAATTGACAGAGTGTCAGATGGCATTTCAGGACTGCAGGATTTACAAAGAAGAATCAAAGCTATTGAAAAGGCTATGGTAGAAAAGGAAAGCCATCTGCCAATCAGGAAGAAGCCTGAAATCTCTGAAGCGGGGAACGAAGTTCTGACGAAGGACATCATTCTCGATCAGATATCGGAGTGTTCATCCTATGGGGTAAGCAGGAGAGAAACCACAGAGCCTGATGCTCAGATGATGGAGTTATGGGAGACCACTGACCAGGATGGCAGCATTGATTTGACGGTTGGCAAGGCCCAGAAGGCGACTACTGTACTGACTGACCACAGTCAGACTGAAGCTATAAAGAAACACAAGAATAAATATCCCTCTTCAGAATCATTGGTTGAGAAAGAATATAGCGTTGACAAATTAGAGATCTCTAAGAGATTCTCCGAGCCCCGTCAAGAAGGCAACAAGAGAAGGATTCTAGAAAGACTTGATTCTGATGTGCAAAAGTTGACAAACCTTCAAATTACCGTGGAAGACCTGAAGAAGAAGGTGGACATTACTGAGAAGACCAAAAAGGCCAAAGGTATTGAATTTGGTACTGTAAAGGAGCAGCTGGATGAAGCCGAAGAAGCCATCACTAGGTTGTTTGATGCCAATAATAATTTGATGAAGAGTGTCGAAGATGAATTTGTGTCTCCTGATGGAGCTTCTGAGATAGTCCCAGATCACAGTGGGAGTGTCAGCAGAAGGAGACTGTCCGAACAAGCAAAAAGAGGGTCAGAGAAAATCGGTCGATTGCAGTTGGAGGTACAGAAACTGCAATTTCTTCTACTGAAGCTGGATGGTGAAAAGGAAAGCAAAGGGTCAACCAGGATCAAGGAGAGGAAAACAAGGGTTCTTCTGCGGGACTATCTCTATTCTGGCACTAGAATGAGCAACACAACCCCAAAGCGTAAGAAAGCTCCTTTTTGTGCATGCATGCCCCCAACTAAGGGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIP1

Protein Analysis

1632

Amino Acids

185.71

Weight (kDa)

5.03

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 14 - 87 1.5e-37 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 352, 1819
Acc36I ACCTGC 3 cut(s) 338, 352, 1819
AccB1I GGYRCC 1 cut(s) 2738
AccBSI CCGCTC 1 cut(s) 1528
AccI GTMKAC 2 cut(s) 1501, 2875
AccII CGCG 1 cut(s) 2953
AciI CCGC 6 cut(s) 1316, 1528, 2599, 2657, 4040, 4801
AclWI GGATC 9 cut(s) 365, 565, 1844, 1857, 2907, 2920, 3625, 3652, 4778
AcoI YGGCCR 1 cut(s) 634
AcyI GRCGYC 1 cut(s) 2739
AfaI GTAC 7 cut(s) 761, 1265, 2098, 3799, 4221, 4495, 4707
AfiI CCNNNNNNNGG 8 cut(s) 559, 663, 1591, 2922, 2968, 4536, 4888, 4889
AflIII ACRYGT 1 cut(s) 1913
AhdI GACNNNNNGTC 1 cut(s) 3922
AhlI ACTAGT 1 cut(s) 3329
AjnI CCWGG 7 cut(s) 282, 824, 1275, 1590, 3263, 4167, 4766
AjuI GAANNNNNNNTTGG 6 cut(s) 2168, 2200, 3078, 3110, 3434, 3466
Alw21I GWGCWC 5 cut(s) 814, 1623, 3069, 3642, 3893
Alw26I GTCTC 8 cut(s) 359, 683, 808, 2082, 3240, 4151, 4596, 4642
Alw44I GTGCAC 1 cut(s) 810
AlwI GGATC 9 cut(s) 365, 565, 1844, 1857, 2907, 2920, 3625, 3652, 4778
AlwNI CAGNNNCTG 5 cut(s) 1420, 1567, 2848, 4130, 4714
Ama87I CYCGRG 1 cut(s) 76
AoxI GGCC 4 cut(s) 583, 634, 4200, 4473
ApaLI GTGCAC 1 cut(s) 810
ApeKI GCWGC 8 cut(s) 1082, 1250, 1253, 1570, 3569, 3761, 4176, 4507
ArsI GACNNNNNNTTYG 2 cut(s) 4658, 4690
AspLEI GCGC 3 cut(s) 282, 2741, 2953
AspS9I GGNCC 3 cut(s) 583, 2703, 4201
AsuHPI GGTGA 8 cut(s) 333, 1456, 1478, 1705, 3190, 3218, 3571, 4754
AvaI CYCGRG 1 cut(s) 76
AvaII GGWCC 1 cut(s) 2703
BaeGI GKGCMC 3 cut(s) 277, 814, 982
BalI TGGCCA 1 cut(s) 636
BamHI GGATCC 2 cut(s) 1849, 2912
BanI GGYRCC 1 cut(s) 2738
BanII GRGCYC 5 cut(s) 1623, 3069, 3642, 3893, 4347
BauI CACGAG 2 cut(s) 807, 2837
BbsI GAAGAC 6 cut(s) 911, 1385, 1725, 3672, 4437, 4469
Bbv12I GWGCWC 5 cut(s) 814, 1623, 3069, 3642, 3893
BbvI GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 3581, 3748, 4188, 4519
BceAI ACGGC 1 cut(s) 1349
BcgI CGANNNNNNTGC 4 cut(s) 1343, 1377, 1958, 1992
BciT130I CCWGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
BclI TGATCA 4 cut(s) 129, 259, 3193, 3340
BcoDI GTCTC 8 cut(s) 359, 683, 808, 2082, 3240, 4151, 4596, 4642
BcuI ACTAGT 1 cut(s) 3329
BfmI CTRYAG 7 cut(s) 345, 1043, 1421, 1568, 3284, 3590, 3944
BfoI RGCGCY 1 cut(s) 2742
BfuAI ACCTGC 3 cut(s) 338, 352, 1819
BglI GCCNNNNNGGC 1 cut(s) 4208
BglII AGATCT 7 cut(s) 1051, 1305, 1604, 1753, 2298, 3594, 4323
BisI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 3570, 3762, 4177, 4508
BlpI GCTNAGC 1 cut(s) 1617
BlsI GCNGC 8 cut(s) 1084, 1252, 1255, 1572, 3571, 3763, 4178, 4509
Bme1390I CCNGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
Bme18I GGWCC 1 cut(s) 2703
BmeRI GACNNNNNGTC 1 cut(s) 3922
BmeT110I CYCGRG 1 cut(s) 76
BmgT120I GGNCC 3 cut(s) 583, 2703, 4201
BmiI GGNNCC 5 cut(s) 517, 1851, 2705, 2740, 2914
BmrFI CCNGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
BmrI ACTGGG 4 cut(s) 279, 1579, 2125, 2701
BmuI ACTGGG 4 cut(s) 279, 1579, 2125, 2701
BoxI GACNNNNGTC 1 cut(s) 4233
BpiI GAAGAC 6 cut(s) 911, 1385, 1725, 3672, 4437, 4469
BpmI CTGGAG 4 cut(s) 1014, 1148, 1607, 3710
Bpu1102I GCTNAGC 1 cut(s) 1617
BpuEI CTTGAG 5 cut(s) 1316, 1446, 2248, 3122, 3830
BsaBI GATNNNNATC 1 cut(s) 3906
BsaHI GRCGYC 1 cut(s) 2739
BsaI GGTCTC 1 cut(s) 4151
BsaJI CCNNGG 6 cut(s) 297, 553, 825, 1590, 2491, 4425
BsaWI WCCGGW 1 cut(s) 1260
BsaXI ACNNNNNCTCC 4 cut(s) 1421, 1451, 3497, 3527
Bsc4I CCNNNNNNNGG 8 cut(s) 559, 663, 1591, 2922, 2968, 4536, 4888, 4889
Bse3DI GCAATG 4 cut(s) 637, 1277, 2358, 2637
Bse8I GATNNNNATC 1 cut(s) 3906
BseBI CCWGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
BseDI CCNNGG 6 cut(s) 297, 553, 825, 1590, 2491, 4425
BseJI GATNNNNATC 1 cut(s) 3906
BseLI CCNNNNNNNGG 8 cut(s) 559, 663, 1591, 2922, 2968, 4536, 4888, 4889
BseMI GCAATG 4 cut(s) 637, 1277, 2358, 2637
BseRI GAGGAG 8 cut(s) 442, 445, 1166, 1334, 1337, 3518, 3557, 3589
BseSI GKGCMC 3 cut(s) 277, 814, 982
BseXI GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 3581, 3748, 4188, 4519
BsgI GTGCAG 3 cut(s) 1068, 2520, 2819
Bsh1236I CGCG 1 cut(s) 2953
Bsh1285I CGRYCG 1 cut(s) 4690
BshFI GGCC 4 cut(s) 585, 636, 4202, 4475
BshNI GGYRCC 1 cut(s) 2738
BsiEI CGRYCG 1 cut(s) 4690
BsiHKAI GWGCWC 5 cut(s) 814, 1623, 3069, 3642, 3893
BsiHKCI CYCGRG 1 cut(s) 76
BsiSI CCGG 1 cut(s) 1261
BslFI GGGAC 6 cut(s) 65, 459, 843, 1573, 4601, 4817
BslI CCNNNNNNNGG 8 cut(s) 559, 663, 1591, 2922, 2968, 4536, 4888, 4889
BsmAI GTCTC 8 cut(s) 359, 683, 808, 2082, 3240, 4151, 4596, 4642
BsmFI GGGAC 6 cut(s) 65, 459, 843, 1573, 4601, 4817
BsmI GAATGC 3 cut(s) 1579, 2215, 2767
BsnI GGCC 4 cut(s) 585, 636, 4202, 4475
Bso31I GGTCTC 1 cut(s) 4151
BsoBI CYCGRG 1 cut(s) 76
Bsp1286I GDGCHC 8 cut(s) 277, 814, 982, 1623, 3069, 3642, 3893, 4347
Bsp1407I TGTACA 1 cut(s) 3797
Bsp1720I GCTNAGC 1 cut(s) 1617
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 6 cut(s) 1316, 1528, 2599, 2657, 4040, 4801
BspANI GGCC 4 cut(s) 585, 636, 4202, 4475
BspFNI CGCG 1 cut(s) 2953
BspLI GGNNCC 5 cut(s) 517, 1851, 2705, 2740, 2914
BspMAI CTGCAG 5 cut(s) 349, 1425, 1572, 3594, 3948
BspMI ACCTGC 3 cut(s) 338, 352, 1819
BspPI GGATC 9 cut(s) 365, 565, 1844, 1857, 2907, 2920, 3625, 3652, 4778
BspQI GCTCTTC 3 cut(s) 1464, 1518, 3057
BspT107I GGYRCC 1 cut(s) 2738
BspTNI GGTCTC 1 cut(s) 4151
BsrBI CCGCTC 1 cut(s) 1528
BsrDI GCAATG 4 cut(s) 637, 1277, 2358, 2637
BsrGI TGTACA 1 cut(s) 3797
BssECI CCNNGG 6 cut(s) 297, 553, 825, 1590, 2491, 4425
BssNI GRCGYC 1 cut(s) 2739
BssSI CACGAG 2 cut(s) 807, 2837
BssT1I CCWWGG 3 cut(s) 297, 553, 2491
Bst2BI CACGAG 2 cut(s) 807, 2837
Bst2UI CCWGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
BstACI GRCGYC 1 cut(s) 2739
BstAPI GCANNNNNTGC 3 cut(s) 239, 1576, 2636
BstAUI TGTACA 1 cut(s) 3797
BstDSI CCRYGG 2 cut(s) 297, 4425
BstENI CCTNNNNNAGG 2 cut(s) 2920, 2966
BstFNI CGCG 1 cut(s) 2953
BstH2I RGCGCY 1 cut(s) 2742
BstHHI GCGC 3 cut(s) 282, 2741, 2953
BstMAI GTCTC 8 cut(s) 359, 683, 808, 2082, 3240, 4151, 4596, 4642
BstMCI CGRYCG 1 cut(s) 4690
BstNI CCWGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
BstNSI RCATGY 5 cut(s) 37, 625, 1917, 4875, 4879
BstPAI GACNNNNGTC 1 cut(s) 4233
BstSCI CCNGG 7 cut(s) 282, 824, 1275, 1590, 3263, 4167, 4766
BstSFI CTRYAG 7 cut(s) 345, 1043, 1421, 1568, 3284, 3590, 3944
BstSLI GKGCMC 3 cut(s) 277, 814, 982
BstUI CGCG 1 cut(s) 2953
BstV1I GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 3581, 3748, 4188, 4519
BstV2I GAAGAC 6 cut(s) 911, 1385, 1725, 3672, 4437, 4469
BstXI CCANNNNNNTGG 1 cut(s) 3688
BsuRI GGCC 4 cut(s) 585, 636, 4202, 4475
BtgI CCRYGG 2 cut(s) 297, 4425
BtsI GCAGTG 2 cut(s) 275, 1565
BveI ACCTGC 3 cut(s) 338, 352, 1819
CaiI CAGNNNCTG 5 cut(s) 1420, 1567, 2848, 4130, 4714
CfoI GCGC 3 cut(s) 282, 2741, 2953
Cfr13I GGNCC 3 cut(s) 583, 2703, 4201
CseI GACGC 4 cut(s) 39, 614, 2942, 2968
Csp6I GTAC 7 cut(s) 760, 1264, 2097, 3798, 4220, 4494, 4706
CspCI CAANNNNNGTGG 2 cut(s) 3562, 3597
CviQI GTAC 7 cut(s) 760, 1264, 2097, 3798, 4220, 4494, 4706
DinI GGCGCC 1 cut(s) 2740
DraI TTTAAA 1 cut(s) 1186
DriI GACNNNNNGTC 1 cut(s) 3922
EaeI YGGCCR 1 cut(s) 634
Eam1105I GACNNNNNGTC 1 cut(s) 3922
EciI GGCGGA 1 cut(s) 2672
Ecl136II GAGCTC 4 cut(s) 1621, 3067, 3640, 3891
Eco130I CCWWGG 3 cut(s) 297, 553, 2491
Eco24I GRGCYC 5 cut(s) 1623, 3069, 3642, 3893, 4347
Eco31I GGTCTC 1 cut(s) 4151
Eco32I GATATC 3 cut(s) 1287, 2325, 4083
Eco47I GGWCC 1 cut(s) 2703
Eco53kI GAGCTC 4 cut(s) 1621, 3067, 3640, 3891
Eco88I CYCGRG 1 cut(s) 76
EcoICRI GAGCTC 4 cut(s) 1621, 3067, 3640, 3891
EcoNI CCTNNNNNAGG 2 cut(s) 2920, 2966
EcoO109I RGGNCCY 2 cut(s) 583, 2703
EcoRI GAATTC 1 cut(s) 2191
EcoRII CCWGG 7 cut(s) 282, 824, 1275, 1590, 3263, 4167, 4766
EcoRV GATATC 3 cut(s) 1287, 2325, 4083
EcoT14I CCWWGG 3 cut(s) 297, 553, 2491
EcoT22I ATGCAT 1 cut(s) 4877
EcoT38I GRGCYC 5 cut(s) 1623, 3069, 3642, 3893, 4347
EgeI GGCGCC 1 cut(s) 2740
EheI GGCGCC 1 cut(s) 2740
ErhI CCWWGG 3 cut(s) 297, 553, 2491
FalI AAGNNNNNCTT 8 cut(s) 903, 935, 1071, 1103, 2085, 2117, 2514, 2546
FaqI GGGAC 6 cut(s) 65, 459, 843, 1573, 4601, 4817
FauI CCCGC 2 cut(s) 4033, 4794
FbaI TGATCA 4 cut(s) 129, 259, 3193, 3340
FblI GTMKAC 2 cut(s) 1501, 2875
Fnu4HI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 3570, 3762, 4177, 4508
FriOI GRGCYC 5 cut(s) 1623, 3069, 3642, 3893, 4347
Fsp4HI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 3570, 3762, 4177, 4508
GlaI GCGC 3 cut(s) 281, 2740, 2952
GluI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 3570, 3762, 4177, 4508
GsuI CTGGAG 4 cut(s) 1014, 1148, 1607, 3710
HaeII RGCGCY 1 cut(s) 2742
HaeIII GGCC 4 cut(s) 585, 636, 4202, 4475
HapII CCGG 1 cut(s) 1261
HgaI GACGC 4 cut(s) 39, 614, 2942, 2968
HhaI GCGC 3 cut(s) 282, 2741, 2953
Hin1I GRCGYC 1 cut(s) 2739
Hin6I GCGC 3 cut(s) 280, 2739, 2951
HinP1I GCGC 3 cut(s) 280, 2739, 2951
HincII GTYRAC 4 cut(s) 2476, 4312, 4407, 4764
HindII GTYRAC 4 cut(s) 2476, 4312, 4407, 4764
HindIII AAGCTT 1 cut(s) 2334
HpaII CCGG 1 cut(s) 1261
HphI GGTGA 8 cut(s) 333, 1456, 1478, 1705, 3190, 3218, 3571, 4754
Hpy99I CGWCG 2 cut(s) 1358, 2958
Hsp92I GRCGYC 1 cut(s) 2739
HspAI GCGC 3 cut(s) 280, 2739, 2951
KasI GGCGCC 1 cut(s) 2738
Ksp22I TGATCA 4 cut(s) 129, 259, 3193, 3340
LguI GCTCTTC 3 cut(s) 1464, 1518, 3057
LmnI GCTCC 6 cut(s) 400, 488, 1626, 4504, 4601, 4864
Lsp1109I GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 3581, 3748, 4188, 4519
MaeIII GTNAC 5 cut(s) 2753, 2957, 3008, 3071, 3559
MbiI CCGCTC 1 cut(s) 1528
MfeI CAATTG 2 cut(s) 1221, 3197
MhlI GDGCHC 8 cut(s) 277, 814, 982, 1623, 3069, 3642, 3893, 4347
MlsI TGGCCA 1 cut(s) 636
MluNI TGGCCA 1 cut(s) 636
Mly113I GGCGCC 1 cut(s) 2739
MmeI TCCRAC 7 cut(s) 1407, 1413, 1929, 1938, 2040, 3432, 4680
Mox20I TGGCCA 1 cut(s) 636
Mph1103I ATGCAT 1 cut(s) 4877
MscI TGGCCA 1 cut(s) 636
MslI CAYNNNNRTG 4 cut(s) 468, 3078, 3735, 4826
Msp20I TGGCCA 1 cut(s) 636
MspA1I CMGCKG 4 cut(s) 541, 2599, 3776, 4510
MspI CCGG 1 cut(s) 1261
MspR9I CCNGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
MunI CAATTG 2 cut(s) 1221, 3197
Mva1269I GAATGC 3 cut(s) 1579, 2215, 2767
MvaI CCWGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
MvnI CGCG 1 cut(s) 2953
NarI GGCGCC 1 cut(s) 2739
NcoI CCATGG 1 cut(s) 297
NlaIV GGNNCC 5 cut(s) 517, 1851, 2705, 2740, 2914
NmuCI GTSAC 3 cut(s) 2753, 3071, 3559
NsiI ATGCAT 1 cut(s) 4877
NspI RCATGY 5 cut(s) 37, 625, 1917, 4875, 4879
PaeI GCATGC 3 cut(s) 625, 4875, 4879
PaeR7I CTCGAG 1 cut(s) 76
PaqCI CACCTGC 2 cut(s) 352, 1819
PciI ACATGT 1 cut(s) 1913
PciSI GCTCTTC 3 cut(s) 1464, 1518, 3057
PctI GAATGC 3 cut(s) 1579, 2215, 2767
PflFI GACNNNGTC 1 cut(s) 2707
PkrI GCNGC 8 cut(s) 1084, 1252, 1255, 1572, 3571, 3763, 4178, 4509
PluTI GGCGCC 1 cut(s) 2742
PpuMI RGGWCCY 1 cut(s) 2703
PscI ACATGT 1 cut(s) 1913
PshAI GACNNNNGTC 1 cut(s) 4233
Psp124BI GAGCTC 4 cut(s) 1623, 3069, 3642, 3893
Psp5II RGGWCCY 1 cut(s) 2703
Psp6I CCWGG 7 cut(s) 282, 824, 1275, 1590, 3263, 4167, 4766
PspGI CCWGG 7 cut(s) 282, 824, 1275, 1590, 3263, 4167, 4766
PspN4I GGNNCC 5 cut(s) 517, 1851, 2705, 2740, 2914
PspPI GGNCC 3 cut(s) 583, 2703, 4201
PspPPI RGGWCCY 1 cut(s) 2703
PstI CTGCAG 5 cut(s) 349, 1425, 1572, 3594, 3948
PstNI CAGNNNCTG 5 cut(s) 1420, 1567, 2848, 4130, 4714
PsyI GACNNNGTC 1 cut(s) 2707
PvuII CAGCTG 3 cut(s) 541, 3776, 4510
RsaI GTAC 7 cut(s) 761, 1265, 2098, 3799, 4221, 4495, 4707
RsaNI GTAC 7 cut(s) 760, 1264, 2097, 3798, 4220, 4494, 4706
RseI CAYNNNNRTG 4 cut(s) 468, 3078, 3735, 4826
SacI GAGCTC 4 cut(s) 1623, 3069, 3642, 3893
SapI GCTCTTC 3 cut(s) 1464, 1518, 3057
SatI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 3570, 3762, 4177, 4508
Sau96I GGNCC 3 cut(s) 583, 2703, 4201
SbfI CCTGCAGG 1 cut(s) 349
ScrFI CCNGG 7 cut(s) 284, 826, 1277, 1592, 3265, 4169, 4768
SdaI CCTGCAGG 1 cut(s) 349
SduI GDGCHC 8 cut(s) 277, 814, 982, 1623, 3069, 3642, 3893, 4347
SfcI CTRYAG 7 cut(s) 345, 1043, 1421, 1568, 3284, 3590, 3944
SfoI GGCGCC 1 cut(s) 2740
Sfr274I CTCGAG 1 cut(s) 76
SinI GGWCC 1 cut(s) 2703
SlaI CTCGAG 1 cut(s) 76
SmiMI CAYNNNNRTG 4 cut(s) 468, 3078, 3735, 4826
SmlI CTYRAG 6 cut(s) 76, 1295, 1461, 2227, 3137, 3809
SmoI CTYRAG 6 cut(s) 76, 1295, 1461, 2227, 3137, 3809
SpeI ACTAGT 1 cut(s) 3329
SphI GCATGC 3 cut(s) 625, 4875, 4879
Sse8387I CCTGCAGG 1 cut(s) 349
SsiI CCGC 6 cut(s) 1316, 1528, 2599, 2657, 4040, 4801
SspDI GGCGCC 1 cut(s) 2738
SstI GAGCTC 4 cut(s) 1623, 3069, 3642, 3893
StyD4I CCNGG 7 cut(s) 282, 824, 1275, 1590, 3263, 4167, 4766
StyI CCWWGG 3 cut(s) 297, 553, 2491
TaqII GACCGA 1 cut(s) 4676
TatI WGTACW 2 cut(s) 3797, 4219
TseFI GTSAC 3 cut(s) 2753, 3071, 3559
TseI GCWGC 8 cut(s) 1082, 1250, 1253, 1570, 3569, 3761, 4176, 4507
Tsp45I GTSAC 3 cut(s) 2753, 3071, 3559
TspGWI ACGGA 5 cut(s) 315, 1371, 3422, 3623, 3914
Tth111I GACNNNGTC 1 cut(s) 2707
VneI GTGCAC 1 cut(s) 810
VpaK11BI GGWCC 1 cut(s) 2703
XagI CCTNNNNNAGG 2 cut(s) 2920, 2966
XbaI TCTAGA 2 cut(s) 26, 4375
XceI RCATGY 5 cut(s) 37, 625, 1917, 4875, 4879
XcmI CCANNNNNNNNNTGG 1 cut(s) 989
XhoI CTCGAG 1 cut(s) 76
XmiI GTMKAC 2 cut(s) 1501, 2875
Zsp2I ATGCAT 1 cut(s) 4877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.