Rh6BG329400

KIP1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0005688
Physical Location & Seq
Reverse (-)
56262779 .. 56269119
6341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG329400.1

Sequence Viewer

Length: 5376 bp
ATGGCGACTGTGTCCCAAGCAGATTCTAGACGCATGTATTCTTGGTGGTGGGACAGCCACATAAGCCCAAAGAACTCGAGATGGCTGAAGGAAAATCTTACAGATATGGATGCCAAAGTCAAACACATGATCAAACTCATTGAAGAAGATGCAGATTCCTTTGCTAGAAGGGCAGAAATGTATTACAAAAAACGCCCAGAACTAATGAAATTGGTTGAAGAGTTCTACCGAGCATACCGTGCGTTAGCTGAAAGATATGATCATGCAACTGGGGCACTGCGCCAGGCTCATCGAACCATGGCAGAGGCATTTCCCAACCAAGTTCCGTTTGTAGATGACTCGCCTGCAGGTTCTTCTGCTAGTGAGACTGATCCCCGAACACCTGAGATGCCAGCTCCTATACGAGCATTATTTGACCTTGATGAATTGCAAAAAGATGCTCTGGGACTCTCCTCCTCAACCCATTTCCATGCTCTCAAAAGGAATGGAGCTTTTAGTGAAGAATCTGACTCTGGAACCAGCCGAATTGGTTTGAAACAGCTGAATGATCTCTTTGGATCGGGAGAAGGAAGGGCGAAAAAGGGCCTCAACTTCCTTGATGCTGACGCAAAAGAACACAGCATGCAGAACAATGGCCATGATCTTAAAAATCGAGCCTTGTTGGGGGATGATCGAGTGGGCAAAGCAGAGACAGAAATATCAAACTTAAAGAAAGCTCTTGCTAAACTAGAAGCTGAAAAGGAAGCTGGCTTACTTCAGTACCAAGAGTGTTTAGAGAGAGTATCTAATTTGGGGTCTGAAGTCTCTCGTGCACAAGAGGATTCCAGGGGACTTCATGAACGAGCCAGTAAAGCTGAAGCTGAAGTTCAAACTACAAAGGAAGCACTTAACAAATTAGAGGCTGAAAGGAAAGCTAGTCTTCTTCAGTATCAGGAGTGCTTGGACAAAATCTCTAATCTGGAAAGCATCATCTCTTGTGCCCAAAAGGATGCTGGAGAGCTAAATGATCGAGCTAGTAGAGCTGAATTTGCATCTGAATCGCTACAGAAAGATCTTGAAAGGGTGGCATCTGAGAAAGAAGCTGCACTTGCACAATACGAACAGTGTCTGGAGAATATATCAAATCTGGAGGACAAACTACTGCATGTTGAGGAGGATGCCAAGAAGATTAACGAGCGTGCTGTTAAAGCTGAACTCGAAGTTGAATCCTTGAAGCAAGCAATTGCCAATTTAACTGAAGAGAAGGAAGCTGCTGCTCTCCAGTACAAGCAATGCCTGGAAACGATATCTAATCTTGAGCATCAGATCTCTCATGCGGAGGAGGAGGCACTACGGCTACACTCTCAGATAGACGATGGGATTGTGAAGTTCAAGGATTCAGAAGAAAAGTGTCTTCTGCTGGTAAACTCAAATCAAAATCTGCAGTTGGAGTTGGAGTCTCTGGTGAAGCAAATGCAATCTCAAGGTGAAGAGCTTACAGAGAAGCAGAAGGAGTTGGGTAGACTTTGGGCTTGCATACAAGAAGAGCGGTTGCGATTTATGGAGGCTGAAACTGCTTTCCAGACACTGCAGCATTTGCATTCCCAGTCCCAGGAGGAACTTAGATCTCTTGTAGCTGAGCTCCAGAATAGAGATTTGATTCTGAAGGACATGGAAGCACGAAGTCAGAGATTGGATGATGAAGTCCAGAAGGTGAAGGAGGAAAACAAGAGCCTAAGTGAGATCAATTTGTCTTCATCTGTTTCAATAAAAGATCTGCAAGGTGAGATCTTAATCTTGAGGGAGACGATTAAGAAACTTGAAGAGGAAGTTGAACTTCGAGTGGACCAAAGAAATGCTCTTCAGCAAGAGATATACTGTCTGAAAGAGGAACTCAGTGACCTGAACAAGAAACACCAAGCTATGCTAGAGCAAGTGGAGTCAGTTGGCTTGGATCCAGTGTGCATTGGGTCATCTGTGAAGGAGTTGCAAGATGAGAACTTACAGCTCAAACAAACATGTGAGGCTGATAAAAGTGAGAAAGTGGCACTGTTGGAAAAGTTGGAAATCATGCAGAAACTTCGGGAGAAAAATGTTCTTTTGGATAATTCCCTTTCTGATTTGAATGTTGAGTTAGAAGGGGTTAGAGGGAAGGTAAAGGAGTTGGAACAATCATGTCAGTCTCTTCTGGCAGAAAAAGGTACTCTTCTTGCTGAAAATGGCACTCTGATTTCCCAGTTGCAGTTTATGACTGAGAATTTAGAAAAATCATCAGAGAAGAACAAATTTTTGGAGAATTCTCTCTTTGATGCGAATGCTGAACTGGAAGGCTTGAGTGTAAAATCAAAGAGCTTAGAAGAATCATGCCTACTGCTTGGTAATGATAAGAGTGGTCTGATCACTGAGAGAGAGAGTTTAATTTTGGAGTTGGGCAGTACTCGGCAAAGACTGGAAGATCTGGAAAAAGGATATGCAGAGATAGAAGAGAAACTCTCTGTTCTGGAGAAGGAAAGAGATTCTGCACTTTGTAAAGTGGAAGAGCTAAATGTATGCTTAGATTCTGAGAAGCAAAATCATGCTAGTTCTGTTGAGTTAAGGGAAACCCAGTTGGCTGAAATGGAACTGAAGATCTCTCATCTCCAAGCAGAAGGGATATGCAGGAAGAAAGAATTTGAAGAGGAACAAGACAAATCTGTTACTGCACAGATAGAAATCTTTGTCCTGCAGAAATGTGTAGAAGATCTGGAAGAGAAGAACTTATCCCTCATGATTGAGCATCAAAAACTTTTGGGGGCATTCGCAATGTCAGAGAAGCTGATTTCTGTCCTAGAGCATGGCAAACTTGAACAACAGAAGGAAATTAAGTCATTGTTTGTGCAAATTAAAGCACTGAGAATGGGGCTGTATCAGGTGTTGAAGAATGTTGACATTGATGCAAACCTTGGGTGTGCAGAAAAGGATGAGCAAGACCAAGCACTCCTTAATCATATACTTGTCAAACTTCAAGACAAACAAAATTCTTTCTCTGAAAGTTGTGATGAAAACCAGCGGTTGCTTAATGAGAACTCTGTTCTCATAGCAATGCTTGCCCAAATGAAACTAGAGGCGGACTGTTTTATGAGGGAAAGAAACACTCTTGACCATGAGTTCAGGACCCAGTCTGAGAAGTTCTTGGTGTTGCAGAGTGGCGCCCAAAGACTTCGTGACATGAATGCAGAATTGAATTTGAAGGTAGTGGAGGGAGAACACAGAGAGGGAGTTTTGAGGACTGAAATAGATAATCTGCACGAGCAGTTGTTGGACTTGCAAAGCATTTACAAGAGTCTACAAAAAGAAAATTCCCAGATGGTTGAAGATAAAGGATCCTTGAAAAGGACGATCTTGAATTTGGAGGAAGAGGCGCGTAACCTAGAAGAGGATAAATGCGTCATGTTTGCTGAAACAATATATTATAGTAACCTCTCCCTTGTTTTCGATGATATTATTTCCCAAAAGCAACTGGAACTGGAAGAGCTCAGTCACAATTATGATGAACTTCATCTTGGCAATAATGACCTGAAAGAGAAGGTGAGAGTATTGGAGGGGCAGTTAGAAGTTATACAGATGGAAAACTTACATCTCAAGGAGTCATTAAATAAGTCGGAGGATGAGCTGAAATTGGTTAAATCTGTGAATGATCAATTGAATGGTGATATTGCAAATGCAAAGGATGGTTTGTCTCAAAAGGAAAATGAGCTTTTGGAAGCCGGGCAGATCATAAATGAACTACAGAATGAGAAAAAAGAGCTGTATATACTGGTGGAGGATTTGACTAGTAAAAGTGATGATGCGAAGGTGGTGCTGGAAGATCAAGAGAAGCAAATTTTCAAACTACATGACGACAATGACCGTCATAGTAAAGAGATTGGATGCCTCCGTGAAGTGAATCAGAAGTTGGAGGTGGAACTATCGAAATTGCATGAAGAAGCTGAAAAAGGCAAAATTGAGGAGGAAAGGTTGATCAGTGAACTAAAGAGGGGAAGAGAAGAGATAGAAATGTGGGTGACTCACGCAGCCACCCTCTTTGGAGAACTGCAGATCTCCTCCATTCGTGAAACATTGTTTGAAGGAAAGATCCACGAGCTCATTGAAGCCTGTCAGATCCTTGAAGACAAAAGCGTTTCCAAAGGTCTGGAGAGTGAACAGATGAAAGAAAGAGTCGGCACATTGGAACATGAAAATGGAGAGCTACTAGCTCAGTTGGCTGCCTATATTCCAGCTGTCATCTCTCTGAAGGAGTGTACAACAGCCCTTGAGAATCATTCACTTATTAAGACCAGATGCTCAGAGGATGCCCTTCTGCAAGCTGAGAGCTCTAAAACGGATGGACATCAAATTGACACAGTGCCAGATGGCATTTCAGGACTGCAGGATTTACAAAGAAGAATCAAAGCTATTGAAAAGGCTATGGTAGAAAAGGAAAGCCATCTTACTGTCAATCAGGAAGGTAAACAATTTGGGGACAGGTTCGGTAGTGAGAAGCCTGAAATCTCTGAAGTGGGGAACGAAGTTCTGACGAAGGACATCATTCTCGATCAGATATCAGAGTGTTCATCCTATGGGGTAAGCAGGAGAGAAACCATAGAGCCTGATGCTCAGATGATGGAGTTATGGGAGACCGCTGACCAGGATGGCAGCATTGATTTGATGGTTGGCAAGGCCCAGAAGGCAACTACTGTACCGACTGACCACAGTCAGACTGAAGCTATAAAGAAACACAAGAATAAATATCCCTCTTCAGAATCATTGGTTGAGAAGGAATATAGCGTTGACAAATTAGAGATCTCTAAGAGATTCTCCGAGCCCCGTCAAGAAGGCAACAAGAGAAGGATTCTAGAAAGACTTGATTCTGATGTTCAAAAGTTGACAAACCTTCAAATTACCGTGGAAGACCTGAAGAAGAAGGTGGACATTACTGAGAAGACCAAAAAGGGCAAAGGTATTGAATTTGGTACTGTAAAAGAGCAGCTGGATGAAGCCGAAGAAGCCATCACTAGATTGTTTGATGCCAATAACAAATTGATGAAGAGTGTCGAAGATGAATTTGTGTCTCCTGATGGAGCTTCTGAGATAGTCCCAGATCACAGTGGGACTGTCAGCAGAAGGAGACTGTCCGAACAAGCAAAAAGAGGGTCAGAGAAAATCGGTCGATTGCAGTTGGAGGTACAGAAACTGCAATTTCTTCTACTGAAGCTGGATGGTGAAAAGGAAAGCAAAGGGTCAACCAGGATCAAGGAGAGGAAAACAAGAGTTCTTCTGCGGGACTATCTCTATTCTGGGACTAGAATGAGCAACACAACCCCAAAGCGTAAGAAAGCTCCTTTTTGTGCATGCATGCCCCCAACTAAGGGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIP1

Protein Analysis

1791

Amino Acids

203.77

Weight (kDa)

4.99

Isoelectric Point (pI)

50.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 14 - 87 1.7e-37 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 338
AccB1I GGYRCC 1 cut(s) 3167
AccBSI CCGCTC 1 cut(s) 1528
AccI GTMKAC 2 cut(s) 1501, 3304
AccII CGCG 1 cut(s) 3382
AciI CCGC 6 cut(s) 1316, 1528, 3028, 3086, 4638, 5278
AclWI GGATC 9 cut(s) 365, 565, 1928, 1941, 3336, 3349, 4087, 4114, 5255
AcoI YGGCCR 1 cut(s) 634
AcyI GRCGYC 1 cut(s) 3168
AfaI GTAC 8 cut(s) 761, 1265, 2182, 2416, 4261, 4698, 4972, 5184
AfiI CCNNNNNNNGG 6 cut(s) 663, 1591, 3351, 3394, 5365, 5366
AflIII ACRYGT 1 cut(s) 1997
AhlI ACTAGT 1 cut(s) 3791
AjnI CCWGG 6 cut(s) 282, 824, 1275, 1590, 4644, 5243
AjuI GAANNNNNNNTTGG 6 cut(s) 2252, 2284, 3504, 3536, 3896, 3928
Alw21I GWGCWC 5 cut(s) 814, 1623, 3495, 4104, 4334
Alw44I GTGCAC 1 cut(s) 810
AlwI GGATC 9 cut(s) 365, 565, 1928, 1941, 3336, 3349, 4087, 4114, 5255
AlwNI CAGNNNCTG 3 cut(s) 1108, 1567, 5191
Ama87I CYCGRG 1 cut(s) 76
AoxI GGCC 3 cut(s) 583, 634, 4677
ApaLI GTGCAC 1 cut(s) 810
ApeKI GCWGC 8 cut(s) 1082, 1250, 1253, 1570, 4031, 4223, 4653, 4984
ArsI GACNNNNNNTTYG 2 cut(s) 5135, 5167
AspLEI GCGC 3 cut(s) 282, 3170, 3382
AspS9I GGNCC 4 cut(s) 583, 1825, 3132, 4678
AsuC2I CCSGG 1 cut(s) 3727
AsuHPI GGTGA 8 cut(s) 1456, 1478, 1705, 1775, 3559, 3680, 4033, 5231
AvaI CYCGRG 1 cut(s) 76
AvaII GGWCC 2 cut(s) 1825, 3132
BaeGI GKGCMC 3 cut(s) 277, 814, 982
BaeI ACNNNNGTAYC 4 cut(s) 743, 776, 4680, 4713
BalI TGGCCA 1 cut(s) 636
BamHI GGATCC 2 cut(s) 1933, 3341
BanI GGYRCC 1 cut(s) 3167
BanII GRGCYC 5 cut(s) 1623, 3495, 4104, 4334, 4824
BarI GAAGNNNNNNTAC 2 cut(s) 735, 767
BauI CACGAG 3 cut(s) 807, 3266, 4097
BbsI GAAGAC 6 cut(s) 911, 1385, 1725, 4134, 4914, 4946
Bbv12I GWGCWC 5 cut(s) 814, 1623, 3495, 4104, 4334
BbvI GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 4043, 4210, 4665, 4996
BceAI ACGGC 1 cut(s) 1349
BcgI CGANNNNNNTGC 6 cut(s) 1020, 1054, 2042, 2076, 3799, 3833
BciT130I CCWGG 6 cut(s) 284, 826, 1277, 1592, 4646, 5245
BclI TGATCA 5 cut(s) 129, 259, 2376, 3655, 3978
BcnI CCSGG 1 cut(s) 3727
BcuI ACTAGT 1 cut(s) 3791
BfmI CTRYAG 8 cut(s) 345, 1043, 1421, 1568, 2702, 3746, 4052, 4385
BfoI RGCGCY 1 cut(s) 3171
BfuAI ACCTGC 1 cut(s) 338
BglI GCCNNNNNGGC 1 cut(s) 4685
BisI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 4032, 4224, 4654, 4985
BlpI GCTNAGC 1 cut(s) 1617
BlsI GCNGC 8 cut(s) 1084, 1252, 1255, 1572, 4033, 4225, 4655, 4986
BmcAI AGTACT 1 cut(s) 2416
Bme1390I CCNGG 7 cut(s) 284, 826, 1277, 1592, 3727, 4646, 5245
Bme18I GGWCC 2 cut(s) 1825, 3132
BmeT110I CYCGRG 1 cut(s) 76
BmgT120I GGNCC 4 cut(s) 583, 1825, 3132, 4678
BmiI GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
BmrFI CCNGG 7 cut(s) 284, 826, 1277, 1592, 3727, 4646, 5245
BmrI ACTGGG 5 cut(s) 279, 1579, 2209, 2578, 3130
BmuI ACTGGG 5 cut(s) 279, 1579, 2209, 2578, 3130
BoxI GACNNNNGTC 1 cut(s) 4710
BpiI GAAGAC 6 cut(s) 911, 1385, 1725, 4134, 4914, 4946
BplI GAGNNNNNCTC 2 cut(s) 2456, 2488
BpmI CTGGAG 7 cut(s) 1014, 1130, 1148, 1244, 1607, 2501, 4172
Bpu1102I GCTNAGC 1 cut(s) 1617
BpuEI CTTGAG 6 cut(s) 1316, 1446, 1798, 2332, 3584, 4292
BpuMI CCSGG 1 cut(s) 3727
BsaBI GATNNNNATC 3 cut(s) 1772, 2690, 4347
BsaHI GRCGYC 1 cut(s) 3168
BsaI GGTCTC 1 cut(s) 4628
BsaJI CCNNGG 5 cut(s) 297, 825, 1590, 2920, 4902
BsaXI ACNNNNNCTCC 6 cut(s) 1421, 1451, 3551, 3581, 3959, 3989
Bsc4I CCNNNNNNNGG 6 cut(s) 663, 1591, 3351, 3394, 5365, 5366
Bse3DI GCAATG 3 cut(s) 1277, 2787, 3066
Bse8I GATNNNNATC 3 cut(s) 1772, 2690, 4347
BseBI CCWGG 6 cut(s) 284, 826, 1277, 1592, 4646, 5245
BseDI CCNNGG 5 cut(s) 297, 825, 1590, 2920, 4902
BseJI GATNNNNATC 3 cut(s) 1772, 2690, 4347
BseLI CCNNNNNNNGG 6 cut(s) 663, 1591, 3351, 3394, 5365, 5366
BseMI GCAATG 3 cut(s) 1277, 2787, 3066
BseRI GAGGAG 7 cut(s) 442, 445, 1166, 1334, 1337, 3980, 4051
BseSI GKGCMC 3 cut(s) 277, 814, 982
BseXI GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 4043, 4210, 4665, 4996
BsgI GTGCAG 5 cut(s) 1068, 2484, 2664, 2949, 3248
Bsh1236I CGCG 1 cut(s) 3382
Bsh1285I CGRYCG 1 cut(s) 5167
BshFI GGCC 3 cut(s) 585, 636, 4679
BshNI GGYRCC 1 cut(s) 3167
BsiEI CGRYCG 1 cut(s) 5167
BsiHKAI GWGCWC 5 cut(s) 814, 1623, 3495, 4104, 4334
BsiHKCI CYCGRG 1 cut(s) 76
BsiSI CCGG 1 cut(s) 3726
BslFI GGGAC 9 cut(s) 65, 459, 843, 1573, 4493, 5078, 5122, 5294, 5311
BslI CCNNNNNNNGG 6 cut(s) 663, 1591, 3351, 3394, 5365, 5366
BsmBI CGTCTC 1 cut(s) 1778
BsmFI GGGAC 9 cut(s) 65, 459, 843, 1573, 4493, 5078, 5122, 5294, 5311
BsmI GAATGC 4 cut(s) 1579, 2299, 2774, 3196
BsnI GGCC 3 cut(s) 585, 636, 4679
Bso31I GGTCTC 1 cut(s) 4628
BsoBI CYCGRG 1 cut(s) 76
Bsp1286I GDGCHC 8 cut(s) 277, 814, 982, 1623, 3495, 4104, 4334, 4824
Bsp1407I TGTACA 1 cut(s) 4259
Bsp1720I GCTNAGC 1 cut(s) 1617
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 6 cut(s) 1316, 1528, 3028, 3086, 4638, 5278
BspANI GGCC 3 cut(s) 585, 636, 4679
BspFNI CGCG 1 cut(s) 3382
BspHI TCATGA 2 cut(s) 835, 2745
BspLI GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
BspMAI CTGCAG 6 cut(s) 349, 1425, 1572, 2706, 4056, 4389
BspMI ACCTGC 1 cut(s) 338
BspPI GGATC 9 cut(s) 365, 565, 1928, 1941, 3336, 3349, 4087, 4114, 5255
BspQI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
BspT107I GGYRCC 1 cut(s) 3167
BspTNI GGTCTC 1 cut(s) 4628
BsrBI CCGCTC 1 cut(s) 1528
BsrDI GCAATG 3 cut(s) 1277, 2787, 3066
BsrGI TGTACA 1 cut(s) 4259
BssECI CCNNGG 5 cut(s) 297, 825, 1590, 2920, 4902
BssNI GRCGYC 1 cut(s) 3168
BssSI CACGAG 3 cut(s) 807, 3266, 4097
BssT1I CCWWGG 2 cut(s) 297, 2920
Bst2BI CACGAG 3 cut(s) 807, 3266, 4097
Bst2UI CCWGG 6 cut(s) 284, 826, 1277, 1592, 4646, 5245
BstACI GRCGYC 1 cut(s) 3168
BstAPI GCANNNNNTGC 3 cut(s) 239, 1576, 3065
BstAUI TGTACA 1 cut(s) 4259
BstDSI CCRYGG 2 cut(s) 297, 4902
BstENI CCTNNNNNAGG 2 cut(s) 3349, 3392
BstFNI CGCG 1 cut(s) 3382
BstH2I RGCGCY 1 cut(s) 3171
BstHHI GCGC 3 cut(s) 282, 3170, 3382
BstMCI CGRYCG 1 cut(s) 5167
BstNI CCWGG 6 cut(s) 284, 826, 1277, 1592, 4646, 5245
BstNSI RCATGY 6 cut(s) 37, 625, 1148, 2001, 5352, 5356
BstPAI GACNNNNGTC 1 cut(s) 4710
BstSCI CCNGG 7 cut(s) 282, 824, 1275, 1590, 3725, 4644, 5243
BstSFI CTRYAG 8 cut(s) 345, 1043, 1421, 1568, 2702, 3746, 4052, 4385
BstSLI GKGCMC 3 cut(s) 277, 814, 982
BstUI CGCG 1 cut(s) 3382
BstV1I GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 4043, 4210, 4665, 4996
BstV2I GAAGAC 6 cut(s) 911, 1385, 1725, 4134, 4914, 4946
BstXI CCANNNNNNTGG 1 cut(s) 4150
BsuRI GGCC 3 cut(s) 585, 636, 4679
BtgI CCRYGG 2 cut(s) 297, 4902
BtsI GCAGTG 2 cut(s) 275, 1565
BveI ACCTGC 1 cut(s) 338
CaiI CAGNNNCTG 3 cut(s) 1108, 1567, 5191
CciI TCATGA 2 cut(s) 835, 2745
CfoI GCGC 3 cut(s) 282, 3170, 3382
Cfr13I GGNCC 4 cut(s) 583, 1825, 3132, 4678
CseI GACGC 3 cut(s) 39, 614, 3394
Csp6I GTAC 8 cut(s) 760, 1264, 2181, 2415, 4260, 4697, 4971, 5183
CspCI CAANNNNNGTGG 2 cut(s) 4024, 4059
CviQI GTAC 8 cut(s) 760, 1264, 2181, 2415, 4260, 4697, 4971, 5183
DinI GGCGCC 1 cut(s) 3169
EaeI YGGCCR 1 cut(s) 634
EciI GGCGGA 1 cut(s) 3101
Ecl136II GAGCTC 4 cut(s) 1621, 3493, 4102, 4332
Eco130I CCWWGG 2 cut(s) 297, 2920
Eco24I GRGCYC 5 cut(s) 1623, 3495, 4104, 4334, 4824
Eco31I GGTCTC 1 cut(s) 4628
Eco32I GATATC 2 cut(s) 1287, 4560
Eco47I GGWCC 2 cut(s) 1825, 3132
Eco53kI GAGCTC 4 cut(s) 1621, 3493, 4102, 4332
Eco88I CYCGRG 1 cut(s) 76
EcoICRI GAGCTC 4 cut(s) 1621, 3493, 4102, 4332
EcoNI CCTNNNNNAGG 2 cut(s) 3349, 3392
EcoO109I RGGNCCY 2 cut(s) 583, 3132
EcoRI GAATTC 1 cut(s) 2275
EcoRII CCWGG 6 cut(s) 282, 824, 1275, 1590, 4644, 5243
EcoRV GATATC 2 cut(s) 1287, 4560
EcoT14I CCWWGG 2 cut(s) 297, 2920
EcoT22I ATGCAT 1 cut(s) 5354
EcoT38I GRGCYC 5 cut(s) 1623, 3495, 4104, 4334, 4824
EgeI GGCGCC 1 cut(s) 3169
EheI GGCGCC 1 cut(s) 3169
ErhI CCWWGG 2 cut(s) 297, 2920
Esp3I CGTCTC 1 cut(s) 1778
FaqI GGGAC 9 cut(s) 65, 459, 843, 1573, 4493, 5078, 5122, 5294, 5311
FauI CCCGC 1 cut(s) 5271
FbaI TGATCA 5 cut(s) 129, 259, 2376, 3655, 3978
FblI GTMKAC 2 cut(s) 1501, 3304
Fnu4HI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 4032, 4224, 4654, 4985
FriOI GRGCYC 5 cut(s) 1623, 3495, 4104, 4334, 4824
Fsp4HI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 4032, 4224, 4654, 4985
GlaI GCGC 3 cut(s) 281, 3169, 3381
GluI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 4032, 4224, 4654, 4985
GsuI CTGGAG 7 cut(s) 1014, 1130, 1148, 1244, 1607, 2501, 4172
HaeII RGCGCY 1 cut(s) 3171
HaeIII GGCC 3 cut(s) 585, 636, 4679
HapII CCGG 1 cut(s) 3726
HgaI GACGC 3 cut(s) 39, 614, 3394
HhaI GCGC 3 cut(s) 282, 3170, 3382
Hin1I GRCGYC 1 cut(s) 3168
Hin6I GCGC 3 cut(s) 280, 3168, 3380
HinP1I GCGC 3 cut(s) 280, 3168, 3380
HincII GTYRAC 4 cut(s) 2905, 4789, 4884, 5241
HindII GTYRAC 4 cut(s) 2905, 4789, 4884, 5241
HpaII CCGG 1 cut(s) 3726
HphI GGTGA 8 cut(s) 1456, 1478, 1705, 1775, 3559, 3680, 4033, 5231
Hsp92I GRCGYC 1 cut(s) 3168
HspAI GCGC 3 cut(s) 280, 3168, 3380
KasI GGCGCC 1 cut(s) 3167
Ksp22I TGATCA 5 cut(s) 129, 259, 2376, 3655, 3978
LguI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
LmnI GCTCC 5 cut(s) 400, 488, 1626, 5078, 5341
Lsp1109I GCAGC 8 cut(s) 1069, 1237, 1240, 1582, 4043, 4210, 4665, 4996
MaeIII GTNAC 7 cut(s) 1877, 2674, 3182, 3383, 3434, 3497, 4021
MbiI CCGCTC 1 cut(s) 1528
MfeI CAATTG 2 cut(s) 1221, 3659
MhlI GDGCHC 8 cut(s) 277, 814, 982, 1623, 3495, 4104, 4334, 4824
MlsI TGGCCA 1 cut(s) 636
MluNI TGGCCA 1 cut(s) 636
Mly113I GGCGCC 1 cut(s) 3168
MlyI GAGTC 9 cut(s) 332, 441, 503, 1445, 1928, 3310, 3614, 4018, 4185
MmeI TCCRAC 9 cut(s) 1407, 1413, 2013, 2022, 2124, 3258, 3600, 3894, 5157
Mox20I TGGCCA 1 cut(s) 636
Mph1103I ATGCAT 1 cut(s) 5354
MscI TGGCCA 1 cut(s) 636
MslI CAYNNNNRTG 4 cut(s) 468, 3059, 3504, 4197
Msp20I TGGCCA 1 cut(s) 636
MspA1I CMGCKG 5 cut(s) 541, 3028, 4238, 4640, 4987
MspI CCGG 1 cut(s) 3726
MspR9I CCNGG 7 cut(s) 284, 826, 1277, 1592, 3727, 4646, 5245
MunI CAATTG 2 cut(s) 1221, 3659
Mva1269I GAATGC 4 cut(s) 1579, 2299, 2774, 3196
MvaI CCWGG 6 cut(s) 284, 826, 1277, 1592, 4646, 5245
MvnI CGCG 1 cut(s) 3382
NarI GGCGCC 1 cut(s) 3168
NciI CCSGG 1 cut(s) 3727
NcoI CCATGG 1 cut(s) 297
NlaIV GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
NmeAIII GCCGAG 1 cut(s) 2398
NmuCI GTSAC 4 cut(s) 1877, 3182, 3497, 4021
NsiI ATGCAT 1 cut(s) 5354
NspI RCATGY 6 cut(s) 37, 625, 1148, 2001, 5352, 5356
PaeI GCATGC 3 cut(s) 625, 5352, 5356
PaeR7I CTCGAG 1 cut(s) 76
PagI TCATGA 2 cut(s) 835, 2745
PciI ACATGT 1 cut(s) 1997
PciSI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
PctI GAATGC 4 cut(s) 1579, 2299, 2774, 3196
PflFI GACNNNGTC 2 cut(s) 10, 3136
PkrI GCNGC 8 cut(s) 1084, 1252, 1255, 1572, 4033, 4225, 4655, 4986
PleI GAGTC 9 cut(s) 332, 441, 503, 1444, 1927, 3309, 3613, 4018, 4184
PluTI GGCGCC 1 cut(s) 3171
PpsI GAGTC 9 cut(s) 332, 441, 503, 1444, 1927, 3309, 3613, 4018, 4184
PpuMI RGGWCCY 1 cut(s) 3132
PscI ACATGT 1 cut(s) 1997
PshAI GACNNNNGTC 1 cut(s) 4710
Psp124BI GAGCTC 4 cut(s) 1623, 3495, 4104, 4334
Psp5II RGGWCCY 1 cut(s) 3132
Psp6I CCWGG 6 cut(s) 282, 824, 1275, 1590, 4644, 5243
PspGI CCWGG 6 cut(s) 282, 824, 1275, 1590, 4644, 5243
PspN4I GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
PspPI GGNCC 4 cut(s) 583, 1825, 3132, 4678
PspPPI RGGWCCY 1 cut(s) 3132
PstI CTGCAG 6 cut(s) 349, 1425, 1572, 2706, 4056, 4389
PstNI CAGNNNCTG 3 cut(s) 1108, 1567, 5191
PsyI GACNNNGTC 2 cut(s) 10, 3136
PvuII CAGCTG 3 cut(s) 541, 4238, 4987
RsaI GTAC 8 cut(s) 761, 1265, 2182, 2416, 4261, 4698, 4972, 5184
RsaNI GTAC 8 cut(s) 760, 1264, 2181, 2415, 4260, 4697, 4971, 5183
RseI CAYNNNNRTG 4 cut(s) 468, 3059, 3504, 4197
SacI GAGCTC 4 cut(s) 1623, 3495, 4104, 4334
SapI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
SatI GCNGC 8 cut(s) 1083, 1251, 1254, 1571, 4032, 4224, 4654, 4985
Sau96I GGNCC 4 cut(s) 583, 1825, 3132, 4678
SbfI CCTGCAGG 1 cut(s) 349
ScaI AGTACT 1 cut(s) 2416
SchI GAGTC 9 cut(s) 332, 441, 503, 1445, 1928, 3310, 3614, 4018, 4185
ScrFI CCNGG 7 cut(s) 284, 826, 1277, 1592, 3727, 4646, 5245
SdaI CCTGCAGG 1 cut(s) 349
SduI GDGCHC 8 cut(s) 277, 814, 982, 1623, 3495, 4104, 4334, 4824
SfcI CTRYAG 8 cut(s) 345, 1043, 1421, 1568, 2702, 3746, 4052, 4385
SfoI GGCGCC 1 cut(s) 3169
Sfr274I CTCGAG 1 cut(s) 76
SinI GGWCC 2 cut(s) 1825, 3132
SlaI CTCGAG 1 cut(s) 76
SmiMI CAYNNNNRTG 4 cut(s) 468, 3059, 3504, 4197
SmlI CTYRAG 7 cut(s) 76, 1295, 1461, 1777, 2311, 3599, 4271
SmoI CTYRAG 7 cut(s) 76, 1295, 1461, 1777, 2311, 3599, 4271
SpeI ACTAGT 1 cut(s) 3791
SphI GCATGC 3 cut(s) 625, 5352, 5356
Sse8387I CCTGCAGG 1 cut(s) 349
SsiI CCGC 6 cut(s) 1316, 1528, 3028, 3086, 4638, 5278
SspDI GGCGCC 1 cut(s) 3167
SstI GAGCTC 4 cut(s) 1623, 3495, 4104, 4334
StyD4I CCNGG 7 cut(s) 282, 824, 1275, 1590, 3725, 4644, 5243
StyI CCWWGG 2 cut(s) 297, 2920
TaqII GACCGA 1 cut(s) 5153
TatI WGTACW 3 cut(s) 1263, 2414, 4259
TseFI GTSAC 4 cut(s) 1877, 3182, 3497, 4021
TseI GCWGC 8 cut(s) 1082, 1250, 1253, 1570, 4031, 4223, 4653, 4984
Tsp45I GTSAC 4 cut(s) 1877, 3182, 3497, 4021
TspGWI ACGGA 3 cut(s) 315, 3884, 4355
Tth111I GACNNNGTC 2 cut(s) 10, 3136
VneI GTGCAC 1 cut(s) 810
VpaK11BI GGWCC 2 cut(s) 1825, 3132
XagI CCTNNNNNAGG 2 cut(s) 3349, 3392
XbaI TCTAGA 2 cut(s) 26, 4852
XceI RCATGY 6 cut(s) 37, 625, 1148, 2001, 5352, 5356
XcmI CCANNNNNNNNNTGG 1 cut(s) 989
XhoI CTCGAG 1 cut(s) 76
XmiI GTMKAC 2 cut(s) 1501, 3304
ZrmI AGTACT 1 cut(s) 2416
Zsp2I ATGCAT 1 cut(s) 5354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.