Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0005688

Physical Location & Seq

Genomic Coordinates Reverse (-)

27674952 .. 27677679

Gene Structure 2728 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g24800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGTCAGAGAAGCGGATTTCTGACCTAGAGCATGGAAATCTTGAGCAGCAGATGGAGATTAAATCCTTTCTTTTGCAAACGAAAGTACTGAGAATGGGGCTGTATCAGGTGTTGAAGACTGTTGACATGGATGCAAACCTCGATTGTGCAGGAGAGGTTGAGAAAGACCAAACACTTTTTAACCACATTCTTGTCAAACTTCAAGAGACGCAAAAATCTCTGTCTGAAACTTGTGATCAAAATCAACAGTTGGTTATTGAGAAGTCAGTTCTCATAGAAATGATTGACCAACTAAAACTAGAGGCGGCAAATCTTATGAGAGAAAGAAACACCCTGGACCGAGAGTTCAAGAACCAGTCTGAGAAGCTTGTGTTGTTGCAGAGTGGGGCCCAAAGACTTGAGGAGAAGAATGAAGAATTGAAGTTGAAAGTAGTGGAAGGCGACCGCAGAGAGGAAGTATTGAGGACTGAAATAGATGATCTGCACGAGCAGTTCTTGGACTTGCAAAGTGCACACAACAATCTATTGGAAGAGAATGGCAAGATGCTTGTAGAGAAAGGAGCTTTGACAAGGATGGTATCGAATTTGTGGGAAGAGAATCGTGGCCTCGAAGAGGAGAAGTCTGTCATGTTTGGTGAAACGATATATCACAATAACTTTTCACTTGTTCTCAAAGATTTTATTTCCAGAAAGCTGCTGGAACTGGAAGAGCTCACTGACTATTTAGATAAACTTCATCTTGGAAAGAATGACCTGGAAGATAAGGTAAGAATATTGGAGGGGAAGTTGGAAGTTACATGGATGGACAACATACAGCTCAAGGAGTCATTAAAGAAGTCCGAGAATGAACTGGAGCTAGTTAAATATGTCAATGATCAATTGAATGGTGAAATTGCAAATGCAAAGGATGCAGTGTCTCATAAGGAAAATGAGCTTTTGGAAGTACATCAGGCCGTCAATGCGCTACAAAATGAGAAGCAAGAATTGCATGCGTTAGTGGAGGATCTGAGTGGTAAGTATGATGAGGCTAAGGTGGTACGAGAACATCAAGAGAAGCAGATTTTCAAACTCTCTGCAGACAATGAACATCAAACCAAAGAGACTTGGAGCCTTCGCGAAGTGAATCAGGAGTTGGAGTCTGAACTGCGGAAGATGCATGGAGAAGCTGAAAAAACCAAAACTAAAGAGGAAAGTTTGATCAATGAACTGCAAAAGGAAAGGCAAGAGATAGAAATGTGGTTGTTTCAGGCTGTCACATTCTTTGGTGAACTACAGACGTCCACAATTCGTGAAACATTGTTTGAAGGAAAAGTCCGTGAGCTCATTGAAGCATGTCAGATACTCGAAGACAGAAGCAATTCCAATGGCATCGAGAACAAAATCATGAAAGAAAGAGTCAGGGCATTGGAAGACAAAAATGGAGGGCTACAAGCTCAGTTGGCAGCATATATTCCAGCTGTCATGTCTTTGAAGGAGTGCATAACATCACTTGAGAAGCATATGCTTGCAGACACCGGATCTCATAAACTTGACACTGAAGAATCAGAGGATGCCTTTCTGCACGCTGAAAGATCTCAAACGGATGGAGATCAAATGGCCACGGTATCAGATGGTGTTTTGGACTTGCAGAATTTACAAAGAAGGATTGAAGCTATTGAAAAGGCAGTGGTGGAGAAAGAAAGTCATGTTTCCACAAATCGGGTTCGGAAGAAGCGTGAAATAGCTGGATCAGGGAATGAAGTTCTGACAAAAGACATCGTTCTTGATCACATATCGGAGTGTTCATCCTATGAGGTAAGCAGGAGAGAAACCACAGAGCCTGATGCTCAGATGCTTGAGTTGTGGGAGACCGCTGACCAGGATGGCAGCATTGATTTGATGGTTGGCAAATCCGAGAAGGGGGCCGTGGTACCTACTGACCACGGTCAGATGGAGGCAGTGAAGGAGCACAAGAAAAAACACCCCTCTTCTGAGTCATTGGTTGAGAAGGAATTGGGCATTGACAAATTAGAGCTCTCTAGGAGATTTACCCAGCCCCGTCAAGAAGGGAACAAGAGAAGGATCCTAGAAAGACTCGACTCCGATGTGCAGAAGTTGACAAACCTTCAGATAACCGTGGAAGACCTTAAGACAAAGGTGGAGATTACTGAACAGAGCAAAAATGGCAAAGATATGGAACTTGATAGCGTAAAGGGGCAGCTGGAAGAAGCTGAAGAGGCCATTACAAAGTTGTTTGACGCCAATCAAAAGTTGATGAAGAGTGTTGAAGATGCTCCTCCTCCGTCCTCGGAGGGAGCTTCTGGGGAAGTACCAGATGAAAGTGGGAGCGTGAGAAGGAGGAGACTTTCAGAACAAGCAAAAAGAGGGTCGGAAAAAATTGGGCGGTTACAGTTGCAGGTGCAGAAACTGCAGTTTCTTCTTCTGAAAATCGATGGCAAAACTGACAGCAAAGGATCGAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KIP1

Protein Analysis

821

Amino Acids

93.89

Weight (kDa)

5.01

Isoelectric Point (pI)

50.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005688)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03080 AT1G03080 AT1G03080
fragaria_vesca	FvH4_2g23102 FvH4_2g23102 FvH4_2g23102
malus_domestica	MD03G1260100.v1.1 MD11G1280400.v1.1
prunus_persica	Prupe.3G033900_v2.0.a1 Prupe.8G236300_v2.0.a1 Prupe.8G236300_v2.0.a1 Prupe.8G236300_v2.0.a1
pyrus_communis	pycom03g20780 pycom11g24800 pycom11g24810
rosa_chinensis	RchiOBHm_Chr6g0290321
rosa_laevigata	RLG00000012227
rosa_multiflora	Rmu_co8491113.1_g000001 Rmu_sc0008900.1_g000002
rosa_roxburghii	Rroxscaffold_7G00177160
rosa_rugosa	Rorug06G0211700 Rorug06G0211800
rosa_samantha	Rh6AG322100 Rh6BG329400 Rh6CG335300 Rh6DG322300
rosa_wichuraiana	Rw6G027810 Rw6G027910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2386
AatII	GACGTC	1 cut(s)	1280
Acc36I	ACCTGC	1 cut(s)	2386
Acc65I	GGTACC	1 cut(s)	1909
AccB1I	GGYRCC	1 cut(s)	1909
AccII	CGCG	1 cut(s)	1116
AciI	CCGC	6 cut(s)	13, 305, 445, 1147, 1851, 2383
AclWI	GGATC	6 cut(s)	1011, 1525, 1735, 2056, 2069, 2461
AcoI	YGGCCR	1 cut(s)	1596
AcsI	RAATTY	2 cut(s)	583, 1630
AcuI	CTGAAG	3 cut(s)	1557, 2090, 2232
AcyI	GRCGYC	2 cut(s)	1277, 2238
AfaI	GTAC	5 cut(s)	87, 945, 1038, 1911, 2310
AfiI	CCNNNNNNNGG	4 cut(s)	451, 613, 1698, 1899
AflII	CTTAAG	1 cut(s)	2126
AjnI	CCWGG	3 cut(s)	333, 753, 1857
AjuI	GAANNNNNNNTTGG	2 cut(s)	1115, 1147
AloI	GAACNNNNNNTCC	2 cut(s)	329, 361
Alw21I	GWGCWC	5 cut(s)	514, 714, 1323, 1950, 2016
Alw26I	GTCTC	5 cut(s)	200, 921, 1094, 1841, 2335
Alw44I	GTGCAC	1 cut(s)	510
AlwI	GGATC	6 cut(s)	1011, 1525, 1735, 2056, 2069, 2461
AlwNI	CAGNNNCTG	2 cut(s)	1820, 2407
AoxI	GGCC	6 cut(s)	387, 604, 951, 1596, 1902, 2217
ApaI	GGGCCC	1 cut(s)	391
ApaLI	GTGCAC	1 cut(s)	510
ApeKI	GCWGC	5 cut(s)	46, 694, 1442, 1866, 2197
ApoI	RAATTY	2 cut(s)	583, 1630
ArsI	GACNNNNNNTTYG	2 cut(s)	2351, 2383
Asp700I	GAANNNNTTC	1 cut(s)	1357
Asp718I	GGTACC	1 cut(s)	1909
AspLEI	GCGC	1 cut(s)	964
AspS9I	GGNCC	4 cut(s)	337, 387, 388, 1902
AsuHPI	GGTGA	3 cut(s)	647, 899, 1277
AvaII	GGWCC	1 cut(s)	337
BaeGI	GKGCMC	2 cut(s)	391, 514
BalI	TGGCCA	1 cut(s)	1598
BamHI	GGATCC	1 cut(s)	2061
BanI	GGYRCC	1 cut(s)	1909
BanII	GRGCYC	4 cut(s)	391, 714, 1323, 2016
BauI	CACGAG	1 cut(s)	485
BbsI	GAAGAC	4 cut(s)	122, 1353, 1416, 2127
Bbv12I	GWGCWC	5 cut(s)	514, 714, 1323, 1950, 2016
BbvI	GCAGC	5 cut(s)	58, 681, 1454, 1878, 2209
BccI	CCATC	9 cut(s)	46, 568, 796, 1577, 1604, 1856, 1873, 1924, 2426
BceAI	ACGGC	2 cut(s)	938, 1889
BciT130I	CCWGG	3 cut(s)	335, 755, 1859
BclI	TGATCA	4 cut(s)	235, 874, 1197, 1765
BcoDI	GTCTC	5 cut(s)	200, 921, 1094, 1841, 2335
BfaI	CTAG	6 cut(s)	26, 299, 857, 2019, 2066, 2461
BfmI	CTRYAG	3 cut(s)	1074, 1271, 2408
BfrI	CTTAAG	1 cut(s)	2126
BfuAI	ACCTGC	1 cut(s)	2386
BglII	AGATCT	1 cut(s)	1571
BisI	GCNGC	6 cut(s)	47, 306, 695, 1443, 1867, 2198
BlsI	GCNGC	6 cut(s)	48, 307, 696, 1444, 1868, 2199
BmcAI	AGTACT	1 cut(s)	87
Bme1390I	CCNGG	3 cut(s)	335, 755, 1859
Bme18I	GGWCC	1 cut(s)	337
BmgT120I	GGNCC	4 cut(s)	337, 387, 388, 1902
BmiI	GGNNCC	6 cut(s)	388, 389, 1109, 1903, 1911, 2063
BmrFI	CCNGG	3 cut(s)	335, 755, 1859
BmsI	GCATC	9 cut(s)	121, 534, 898, 1143, 1377, 1540, 1813, 1821, 2260
BoxI	GACNNNNGTC	1 cut(s)	1923
BpiI	GAAGAC	4 cut(s)	122, 1353, 1416, 2127
BpmI	CTGGAG	1 cut(s)	872
Bpu10I	CCTNAGC	1 cut(s)	1029
BpuEI	CTTGAG	5 cut(s)	62, 419, 803, 1511, 1856
Bsa29I	ATCGAT	1 cut(s)	2430
BsaBI	GATNNNNATC	2 cut(s)	240, 1587
BsaHI	GRCGYC	2 cut(s)	1277, 2238
BsaI	GGTCTC	1 cut(s)	1841
BsaJI	CCNNGG	6 cut(s)	333, 1599, 1905, 1921, 2115, 2286
BsaWI	WCCGGW	1 cut(s)	1514
BsaXI	ACNNNNNCTCC	4 cut(s)	770, 800, 1121, 1151
Bsc4I	CCNNNNNNNGG	4 cut(s)	451, 613, 1698, 1899
Bse1I	ACTGG	3 cut(s)	355, 708, 855
Bse8I	GATNNNNATC	2 cut(s)	240, 1587
BseBI	CCWGG	3 cut(s)	335, 755, 1859
BseCI	ATCGAT	1 cut(s)	2430
BseDI	CCNNGG	6 cut(s)	333, 1599, 1905, 1921, 2115, 2286
BseGI	GGATG	8 cut(s)	136, 579, 807, 913, 1555, 1588, 1784, 1867
BseJI	GATNNNNATC	2 cut(s)	240, 1587
BseLI	CCNNNNNNNGG	4 cut(s)	451, 613, 1698, 1899
BseMII	CTCAG	6 cut(s)	80, 351, 998, 1448, 1841, 1962
BseNI	ACTGG	3 cut(s)	355, 708, 855
BseRI	GAGGAG	5 cut(s)	416, 629, 2265, 2268, 2353
BseSI	GKGCMC	2 cut(s)	391, 514
BseXI	GCAGC	5 cut(s)	58, 681, 1454, 1878, 2209
BseYI	CCCAGC	1 cut(s)	2031
BsgI	GTGCAG	5 cut(s)	168, 467, 1544, 2108, 2420
Bsh1236I	CGCG	1 cut(s)	1116
Bsh1285I	CGRYCG	1 cut(s)	445
BshFI	GGCC	6 cut(s)	389, 606, 953, 1598, 1904, 2219
BshNI	GGYRCC	1 cut(s)	1909
BshVI	ATCGAT	1 cut(s)	2430
BsiEI	CGRYCG	1 cut(s)	445
BsiHKAI	GWGCWC	5 cut(s)	514, 714, 1323, 1950, 2016
BsiSI	CCGG	1 cut(s)	1515
BslI	CCNNNNNNNGG	4 cut(s)	451, 613, 1698, 1899
BsmAI	GTCTC	5 cut(s)	200, 921, 1094, 1841, 2335
BsmBI	CGTCTC	1 cut(s)	200
BsnI	GGCC	6 cut(s)	389, 606, 953, 1598, 1904, 2219
Bso31I	GGTCTC	1 cut(s)	1841
Bsp120I	GGGCCC	1 cut(s)	387
Bsp1286I	GDGCHC	6 cut(s)	391, 514, 714, 1323, 1950, 2016
Bsp68I	TCGCGA	1 cut(s)	1116
BspACI	CCGC	6 cut(s)	13, 305, 445, 1147, 1851, 2383
BspANI	GGCC	6 cut(s)	389, 606, 953, 1598, 1904, 2219
BspCNI	CTCAG	6 cut(s)	81, 352, 999, 1447, 1840, 1963
BspDI	ATCGAT	1 cut(s)	2430
BspFNI	CGCG	1 cut(s)	1116
BspHI	TCATGA	1 cut(s)	1383
BspLI	GGNNCC	6 cut(s)	388, 389, 1109, 1903, 1911, 2063
BspMAI	CTGCAG	2 cut(s)	1078, 2412
BspMI	ACCTGC	1 cut(s)	2386
BspPI	GGATC	6 cut(s)	1011, 1525, 1735, 2056, 2069, 2461
BspQI	GCTCTTC	1 cut(s)	702
BspT107I	GGYRCC	1 cut(s)	1909
BspTI	CTTAAG	1 cut(s)	2126
BspTNI	GGTCTC	1 cut(s)	1841
BsrI	ACTGG	3 cut(s)	355, 708, 855
BssECI	CCNNGG	6 cut(s)	333, 1599, 1905, 1921, 2115, 2286
BssNI	GRCGYC	2 cut(s)	1277, 2238
BssSI	CACGAG	1 cut(s)	485
Bst2BI	CACGAG	1 cut(s)	485
Bst2UI	CCWGG	3 cut(s)	335, 755, 1859
Bst4CI	ACNGT	6 cut(s)	121, 249, 1603, 1925, 2116, 2391
Bst6I	CTCTTC	7 cut(s)	525, 588, 606, 702, 1972, 2208, 2252
BstACI	GRCGYC	2 cut(s)	1277, 2238
BstAFI	CTTAAG	1 cut(s)	2126
BstAPI	GCANNNNNTGC	3 cut(s)	908, 985, 2407
BstC8I	GCNNGC	3 cut(s)	990, 1506, 1563
BstDEI	CTNAG	7 cut(s)	89, 360, 1007, 1029, 1434, 1827, 1971
BstDSI	CCRYGG	4 cut(s)	1599, 1905, 1921, 2115
BstENI	CCTNNNNNAGG	1 cut(s)	611
BstF5I	GGATG	8 cut(s)	136, 579, 807, 913, 1555, 1588, 1784, 1867
BstFNI	CGCG	1 cut(s)	1116
BstHHI	GCGC	1 cut(s)	964
BstMAI	GTCTC	5 cut(s)	200, 921, 1094, 1841, 2335
BstMCI	CGRYCG	1 cut(s)	445
BstMWI	GCNNNNNNNGC	8 cut(s)	908, 959, 985, 1153, 1439, 2163, 2216, 2407
BstNI	CCWGG	3 cut(s)	335, 755, 1859
BstNSI	RCATGY	2 cut(s)	992, 1335
BstPAI	GACNNNNGTC	1 cut(s)	1923
BstSCI	CCNGG	3 cut(s)	333, 753, 1857
BstSFI	CTRYAG	3 cut(s)	1074, 1271, 2408
BstSLI	GKGCMC	2 cut(s)	391, 514
BstUI	CGCG	1 cut(s)	1116
BstV1I	GCAGC	5 cut(s)	58, 681, 1454, 1878, 2209
BstV2I	GAAGAC	4 cut(s)	122, 1353, 1416, 2127
BstX2I	RGATCY	4 cut(s)	1003, 1517, 1571, 2061
BstYI	RGATCY	4 cut(s)	1003, 1517, 1571, 2061
Bsu15I	ATCGAT	1 cut(s)	2430
BsuRI	GGCC	6 cut(s)	389, 606, 953, 1598, 1904, 2219
BsuTUI	ATCGAT	1 cut(s)	2430
BtgI	CCRYGG	4 cut(s)	1599, 1905, 1921, 2115
BtsCI	GGATG	8 cut(s)	136, 579, 807, 913, 1555, 1588, 1784, 1867
BtsI	GCAGTG	3 cut(s)	918, 1671, 1944
BtsIMutI	CAGTG	5 cut(s)	714, 918, 1533, 1671, 1944
BtuMI	TCGCGA	1 cut(s)	1116
BveI	ACCTGC	1 cut(s)	2386
Cac8I	GCNNGC	3 cut(s)	990, 1506, 1563
CaiI	CAGNNNCTG	2 cut(s)	1820, 2407
CciI	TCATGA	1 cut(s)	1383
CfoI	GCGC	1 cut(s)	964
Cfr13I	GGNCC	4 cut(s)	337, 387, 388, 1902
ClaI	ATCGAT	1 cut(s)	2430
CseI	GACGC	2 cut(s)	217, 2246
Csp6I	GTAC	5 cut(s)	86, 944, 1037, 1910, 2309
CviQI	GTAC	5 cut(s)	86, 944, 1037, 1910, 2309
DdeI	CTNAG	7 cut(s)	89, 360, 1007, 1029, 1434, 1827, 1971
EaeI	YGGCCR	1 cut(s)	1596
Eam1104I	CTCTTC	7 cut(s)	525, 588, 606, 702, 1972, 2208, 2252
EarI	CTCTTC	7 cut(s)	525, 588, 606, 702, 1972, 2208, 2252
Ecl136II	GAGCTC	3 cut(s)	712, 1321, 2014
Eco24I	GRGCYC	4 cut(s)	391, 714, 1323, 2016
Eco31I	GGTCTC	1 cut(s)	1841
Eco47I	GGWCC	1 cut(s)	337
Eco53kI	GAGCTC	3 cut(s)	712, 1321, 2014
Eco57I	CTGAAG	3 cut(s)	1557, 2090, 2232
EcoICRI	GAGCTC	3 cut(s)	712, 1321, 2014
EcoNI	CCTNNNNNAGG	1 cut(s)	611
EcoO109I	RGGNCCY	1 cut(s)	387
EcoRII	CCWGG	3 cut(s)	333, 753, 1857
EcoT22I	ATGCAT	1 cut(s)	1158
EcoT38I	GRGCYC	4 cut(s)	391, 714, 1323, 2016
Esp3I	CGTCTC	1 cut(s)	200
FauNDI	CATATG	1 cut(s)	1500
FbaI	TGATCA	4 cut(s)	235, 874, 1197, 1765
Fnu4HI	GCNGC	6 cut(s)	47, 306, 695, 1443, 1867, 2198
FokI	GGATG	8 cut(s)	143, 586, 814, 920, 1562, 1595, 1771, 1874
FriOI	GRGCYC	4 cut(s)	391, 714, 1323, 2016
Fsp4HI	GCNGC	6 cut(s)	47, 306, 695, 1443, 1867, 2198
FspBI	CTAG	6 cut(s)	26, 299, 857, 2019, 2066, 2461
GlaI	GCGC	1 cut(s)	963
GluI	GCNGC	6 cut(s)	47, 306, 695, 1443, 1867, 2198
GsaI	CCCAGC	1 cut(s)	2035
GsuI	CTGGAG	1 cut(s)	872
HaeIII	GGCC	6 cut(s)	389, 606, 953, 1598, 1904, 2219
HapII	CCGG	1 cut(s)	1515
HgaI	GACGC	2 cut(s)	217, 2246
HhaI	GCGC	1 cut(s)	964
Hin1I	GRCGYC	2 cut(s)	1277, 2238
Hin6I	GCGC	1 cut(s)	962
HinP1I	GCGC	1 cut(s)	962
HincII	GTYRAC	2 cut(s)	124, 2097
HindII	GTYRAC	2 cut(s)	124, 2097
HindIII	AAGCTT	1 cut(s)	365
HinfI	GANTC	9 cut(s)	598, 824, 1123, 1136, 1395, 1541, 1973, 2073, 2078
HpaII	CCGG	1 cut(s)	1515
HphI	GGTGA	3 cut(s)	647, 899, 1277
Hpy166II	GTNNAC	5 cut(s)	124, 512, 1268, 1281, 2097
Hpy8I	GTNNAC	5 cut(s)	124, 512, 1268, 1281, 2097
HpyCH4III	ACNGT	6 cut(s)	121, 249, 1603, 1925, 2116, 2391
HpyCH4IV	ACGT	1 cut(s)	1277
HpyF10VI	GCNNNNNNNGC	8 cut(s)	908, 959, 985, 1153, 1439, 2163, 2216, 2407
HpyF3I	CTNAG	7 cut(s)	89, 360, 1007, 1029, 1434, 1827, 1971
HpySE526I	ACGT	1 cut(s)	1277
Hsp92I	GRCGYC	2 cut(s)	1277, 2238
HspAI	GCGC	1 cut(s)	962
KpnI	GGTACC	1 cut(s)	1913
Ksp22I	TGATCA	4 cut(s)	235, 874, 1197, 1765
LguI	GCTCTTC	1 cut(s)	702
LmnI	GCTCC	7 cut(s)	560, 853, 1107, 1945, 2278, 2294, 2325
Lsp1109I	GCAGC	5 cut(s)	58, 681, 1454, 1878, 2209
LweI	GCATC	9 cut(s)	121, 534, 898, 1143, 1377, 1540, 1813, 1821, 2260
MaeI	CTAG	6 cut(s)	26, 299, 857, 2019, 2066, 2461
MaeII	ACGT	1 cut(s)	1277
MaeIII	GTNAC	3 cut(s)	793, 1252, 2385
MfeI	CAATTG	1 cut(s)	878
MflI	RGATCY	4 cut(s)	1003, 1517, 1571, 2061
MhlI	GDGCHC	6 cut(s)	391, 514, 714, 1323, 1950, 2016
MlsI	TGGCCA	1 cut(s)	1598
MluNI	TGGCCA	1 cut(s)	1598
MlyI	GAGTC	6 cut(s)	833, 1145, 1404, 1982, 2067, 2072
MmeI	TCCRAC	3 cut(s)	768, 1113, 2349
Mox20I	TGGCCA	1 cut(s)	1598
Mph1103I	ATGCAT	1 cut(s)	1158
MroXI	GAANNNNTTC	1 cut(s)	1357
MscI	TGGCCA	1 cut(s)	1598
MseI	TTAA	5 cut(s)	60, 180, 830, 861, 2127
MslI	CAYNNNNRTG	1 cut(s)	278
Msp20I	TGGCCA	1 cut(s)	1598
MspA1I	CMGCKG	3 cut(s)	1457, 1853, 2200
MspCI	CTTAAG	1 cut(s)	2126
MspI	CCGG	1 cut(s)	1515
MspR9I	CCNGG	3 cut(s)	335, 755, 1859
MunI	CAATTG	1 cut(s)	878
MvaI	CCWGG	3 cut(s)	335, 755, 1859
MvnI	CGCG	1 cut(s)	1116
MwoI	GCNNNNNNNGC	8 cut(s)	908, 959, 985, 1153, 1439, 2163, 2216, 2407
NdeI	CATATG	1 cut(s)	1500
NlaIV	GGNNCC	6 cut(s)	388, 389, 1109, 1903, 1911, 2063
NmuCI	GTSAC	1 cut(s)	1252
NruI	TCGCGA	1 cut(s)	1116
NsiI	ATGCAT	1 cut(s)	1158
NspI	RCATGY	2 cut(s)	992, 1335
PaeI	GCATGC	1 cut(s)	992
PagI	TCATGA	1 cut(s)	1383
PaqCI	CACCTGC	1 cut(s)	2386
PciSI	GCTCTTC	1 cut(s)	702
PcsI	WCGNNNNNNNCGW	1 cut(s)	1711
PdmI	GAANNNNTTC	1 cut(s)	1357
PfeI	GAWTC	3 cut(s)	598, 1123, 1541
PkrI	GCNGC	6 cut(s)	48, 307, 696, 1444, 1868, 2199
PleI	GAGTC	6 cut(s)	832, 1144, 1403, 1981, 2067, 2072
PpsI	GAGTC	6 cut(s)	832, 1144, 1403, 1981, 2067, 2072
PshAI	GACNNNNGTC	1 cut(s)	1923
Psp124BI	GAGCTC	3 cut(s)	714, 1323, 2016
Psp6I	CCWGG	3 cut(s)	333, 753, 1857
PspFI	CCCAGC	1 cut(s)	2031
PspGI	CCWGG	3 cut(s)	333, 753, 1857
PspN4I	GGNNCC	6 cut(s)	388, 389, 1109, 1903, 1911, 2063
PspOMI	GGGCCC	1 cut(s)	387
PspPI	GGNCC	4 cut(s)	337, 387, 388, 1902
PstI	CTGCAG	2 cut(s)	1078, 2412
PstNI	CAGNNNCTG	2 cut(s)	1820, 2407
PsuI	RGATCY	4 cut(s)	1003, 1517, 1571, 2061
PvuII	CAGCTG	2 cut(s)	1457, 2200
RruI	TCGCGA	1 cut(s)	1116
RsaI	GTAC	5 cut(s)	87, 945, 1038, 1911, 2310
RsaNI	GTAC	5 cut(s)	86, 944, 1037, 1910, 2309
RseI	CAYNNNNRTG	1 cut(s)	278
SacI	GAGCTC	3 cut(s)	714, 1323, 2016
SapI	GCTCTTC	1 cut(s)	702
SaqAI	TTAA	5 cut(s)	60, 180, 830, 861, 2127
SatI	GCNGC	6 cut(s)	47, 306, 695, 1443, 1867, 2198
Sau96I	GGNCC	4 cut(s)	337, 387, 388, 1902
ScaI	AGTACT	1 cut(s)	87
SchI	GAGTC	6 cut(s)	833, 1145, 1404, 1982, 2067, 2072
ScrFI	CCNGG	3 cut(s)	335, 755, 1859
SduI	GDGCHC	6 cut(s)	391, 514, 714, 1323, 1950, 2016
SfaNI	GCATC	9 cut(s)	121, 534, 898, 1143, 1377, 1540, 1813, 1821, 2260
SfcI	CTRYAG	3 cut(s)	1074, 1271, 2408
SinI	GGWCC	1 cut(s)	337
SmiMI	CAYNNNNRTG	1 cut(s)	278
SmlI	CTYRAG	6 cut(s)	41, 398, 818, 1490, 1835, 2126
SmoI	CTYRAG	6 cut(s)	41, 398, 818, 1490, 1835, 2126
SphI	GCATGC	1 cut(s)	992
SsiI	CCGC	6 cut(s)	13, 305, 445, 1147, 1851, 2383
SspI	AATATT	1 cut(s)	774
SspMI	CTAG	6 cut(s)	26, 299, 857, 2019, 2066, 2461
SstI	GAGCTC	3 cut(s)	714, 1323, 2016
StyD4I	CCNGG	3 cut(s)	333, 753, 1857
TaaI	ACNGT	6 cut(s)	121, 249, 1603, 1925, 2116, 2391
TaiI	ACGT	1 cut(s)	1280
TaqI	TCGA	8 cut(s)	141, 581, 609, 1344, 1371, 2076, 2430, 2456
TaqII	GACCGA	1 cut(s)	354
TatI	WGTACW	2 cut(s)	85, 943
TauI	GCSGC	1 cut(s)	308
TfiI	GAWTC	3 cut(s)	598, 1123, 1541
Tru1I	TTAA	5 cut(s)	60, 180, 830, 861, 2127
Tru9I	TTAA	5 cut(s)	60, 180, 830, 861, 2127
TscAI	CASTG	5 cut(s)	721, 918, 1540, 1671, 1944
TseFI	GTSAC	1 cut(s)	1252
TseI	GCWGC	5 cut(s)	46, 694, 1442, 1866, 2197
Tsp45I	GTSAC	1 cut(s)	1252
TspGWI	ACGGA	3 cut(s)	1304, 1595, 2271
TspRI	CASTG	5 cut(s)	721, 918, 1540, 1671, 1944
Vha464I	CTTAAG	1 cut(s)	2126
VneI	GTGCAC	1 cut(s)	510
VpaK11BI	GGWCC	1 cut(s)	337
XagI	CCTNNNNNAGG	1 cut(s)	611
XapI	RAATTY	2 cut(s)	583, 1630
XceI	RCATGY	2 cut(s)	992, 1335
XcmI	CCANNNNNNNNNTGG	1 cut(s)	694
XmnI	GAANNNNTTC	1 cut(s)	1357
XspI	CTAG	6 cut(s)	26, 299, 857, 2019, 2066, 2461
ZraI	GACGTC	1 cut(s)	1278
ZrmI	AGTACT	1 cut(s)	87
Zsp2I	ATGCAT	1 cut(s)	1158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.