RLG00000012227

KIP1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0005688
Physical Location & Seq
Forward (+)
16420256 .. 16427031
6776 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012227

Sequence Viewer

Length: 5613 bp
ATGAAAACCGTGTGGATGTGTTATTCTGTGAAGTATTTCTTAACAAGTCTGATCGTTTGGGTTTTTGTTTTACTGATCAGGTGTGACCTTGTGAGCACAAATTCATCCGAGAATTACAGATTTGGTGGGTTTAAGCCGCTCCCGGTTGAGTTTACTCGTTGGTTTTGGGTTACTGCAACACCAGTATCGACGGTGGTGGTGATATTGGCCGGAGCTATGGCGACTGTGTCCCAAGCAGATTCTAGACGCATGTATTCTTGGTGGTGGGACAGCCACATAAGCCCAAAGAACTCGAGATGGCTGAAGGAAAATCTTACAGATATGGATGCCAAAGTCAAACACATGATCAAACTCATTGAAGAAGATGCAGATTCCTTTGCTAGAAGGGCAGAAATGTATTACAAAAAACGCCCAGAACTAATGAAATTGGTTGAAGAGTTCTACCGAGCATACCGTGCTTTAGCTGAAAGATATGATCATGCAACTGGGGCACTGCGCCAGGCTCATCGAACCATGGCAGAGGCATTTCCCAACCAAGTTCCGTTTGTAGATGACTCGCCTGCAGGTTCTTCTGCTAGTGAGACTGATCCCCGAACACCTGAGATGCCAGCCCCTATACGAGCATTATTTGACCTTGATGAATTGCAAAAAGATGCTCTGGGACTCTCCTCCTCAACCCATTTCCATGCTCTCAAAAGGAATGGAGCTGTTGGTGAAGAATCTGACTCTGGAACCAGCCGAATTGGTTTGAAACAGCTGAATGATCTCTTTGGATCAGGAGAAGGAAGGGCAAAAAAGGGCCTCAACTTCCTTGATGCTGACGCAATAGAACACAGCATGCAGAACAATGGCCATGATCTTAAAAATCGAGCCTTGTTGGGGGATGATCGAGTGGGCAAAGCAGAGACAGAAACATCGAACTTAAAGAAAGCTCTTGCTAAAATAGAAGCTGAAAAGGAAGCTGGCTTACTTCAGTACCAAGAGTGTTTAGAGAGAGTATCTAATTTGGAGTCTGAAGTCTCTCGTGCACAAGAGGATTCCAGGGGACTTAATGAACGAGCCAGTAAAGCTGAAGCTGAAGTTCAAACTACAAAGGAAGCACTTAGCAAATTAGAGGCTGAAAGCGAAGCTAGTCTTCTTCAGTATCAGGAGTGCTTGGACAAAATCTCTAATCTGGAAAGCATCATCTCTTGTGCCCAAAAGGATGCTGGAGAGCTAAATGATCGAGCTAGTAGAGCTGAATTTGCATCTGAATCTCTACAGAAAGATCTTGAAAGGGTGGCATCTGAGAAAGAAGCTGCACTTGCACAATACGAACAGTGTCTGGAGAATATATCAAATCTGGAGGACAAACTACTGCATGTTGAGGAGGATGCCAAGAGGATTAATGAGCGTGCTTTTAAAGCTGAACTCGAAGTTGAATCCTTGAAGCAAGCAATTGCCAATTTAACGGAAGAGAAGGAAGCTGCTGCTCTCCAGTACAAGCAGTGCCTGGAAATGATATCTAATCTTGAGCATAAGATCTCTCATGCGGAGGAGGAGGCACTACGGCTGCACTCTCAGATGGATGACGGGATTGCGAAGTTAAAGGATTCGGAAGAAAAGTGTCTTCTGCTGGTAAACTCAAATCAGAATCTGCAGTCGGAGTTGGAGTCTGTGGTGAAGCAAATGCAATCTCAAGGTGAAGAGCTTACAGAGAAGCAGAAGGAGTTGGGTAGACTATGGGCTTGCATACAAGAAGAGCGGTTGCGATTTATGGAGGCTGAAACTGCTTTCCAGACACTGCAACATTTGCATTCCCAATCCCAGGAGGAACTTAGATCTCTTGTAGCTGAGCTCCAGAATAGAGATTTGATTCTGAAGGACATGGAAGCACGAAGTCAGAGTTTGGATGATGAAGTCCAGAAGGTGAAGGAGGAAAACAAGAGCCTAAGTGAGATCAATTTGTCTTCATCTGTTTCAATAAAAGATCTGCAAGGTGAGATCTTAATCTTGAGGGAGACGATTAAGAAACTTGAAGATGAAGTTGAACTTCGAGTGGACCAAAGAAATGCTCTTCAGCAAGAGATATACTGTCTGAAAGAGGAACTCAGTGACCTGAACAAGAAACACCAAGCTATGCTAGAGCAGGTGGAGTCAGTTGGCTTGGATCCAGTGTGCATTGGGTCATCTGTGAAGGAGTTGCAAGATGAGAACTTACAGCTCAAACAAACATGTGAGGCTGATAAAAGTGAGAAAGTGGCACTGTTGGAAAAGTTGGAAATCATGCAGAAACTTCGGGAGAAAAATGTTCTTTTGGAGAATTCCCTTTCTGATTTGAATGTTGAGTTAGAAGGGGTTAGAGGGAAGGTAAAGGAGTTGGAACAATCATGTCAGTCTCTTCTGGCAGAAAAAGGTACTCTTCTTGCTGAAAATGGCACTCTGATTTCCCAGTTGCAGTTTATGACTGAGAATTTAGAAAAATCATCAGAGAAGAACAAATTTTTGGAGAATTCTCTCTTTGATGCGAATGCTGAACTGGAAGGCTTGAGTGTAAAATCAAAGAGCTTAGAAGAATCATGCCTACTGCTTGGTAATGATAAGACTGGTCTGATCACTGAGAGAGAGAGTTTAATTTTGGAGTTGGGCATTACTCGGCAAAGACTGGAAGATCTGGACAAAGGATATGCAGAGATAAAAGAGAAACTCTCTGTTCTGGAGAAGGAAAGAGATTCTGCACTTTGTAAAGTGGAAGAGCTAAATGTATGCTTAGATTCTGAGAAGCAAAATCATGCCAGTTCTGTTGAGTTAAGGGAAACCCAGTTGGCTGAAATGGAACTGAAGATCTCTCATCTTCAAGCAGAAGGGATATGCATGAAGAAAGAATTTGAAGAGGAACAAGACAAATCTGTTACTGCACAGATAGAAATCTTTGTCCTGCAGAAATGTGTAGAAGATCTGGAAGAGAAGAACTTATCCCTCATGATTGAGCATCAAAAGCTTTTGGGGGCATCTGCAATGTCAGAGAAGCTGATTTCTGTCCTAGAGCATGGCAAACTTGAACAACAGAAGGAAATTAAGTCATTGTTTGTGCAAATTAAAGCACTGAGAATGGGGCTGTATCAGGTGTTGAAGAATGTTGACATTGATGCAAACCTTGGGTGTGCAGAAAAGGATGAGCAAGACCAAGCACTCCTTAATCATGTACTTGTCAAACTTCAAGACAAACAAAATTCTTTCTCTGAAAGTTGTGATGAAAACCAGCGGTTGCTTATTGAGAACTCTGTTCTCATAGCAATGCTTGCCCAAATGAAACTAGAGGCGGACTGTTTAATGAGGGAAAGAAACACTCTTGACCATGAGTTCAGGACCCAGTCTGAGAAGTTCTTGGTGTTGCAGAGTGGCGCCCAAAGACTTCGTGACATGAATGCAGAATTGAATTTGAAGGTAGTGGAGGGAGAACACAGAGAGGGAGTTTTGAGGACTGAAATAGATAATCTGCACGAGCAGTTGCTGGACTTGCAAAGCATTTACAAGAGTCTACAAAAAGAAAATTCCCAGATGGTTGAAGATAAAGGATCCTTGAAAAGGACGGTCTTGAATTTGGAGGAAGAGGCGCATAACCTAGAAGAGGATAAATGTGTCATGTTTGCTGAAACAATATATTATAGTAACCTCTCCCTTGTTTTCGATGATATTATTTCCCAAAAGCAACTGGAACTGGAAGAGCTCAGTCACAATTATGATGAACTTCATCTTGGAAATAATGAGCTGAAAGAGAAGGTGAGAATATTGGAGGGGGAGTTAGAAGTTATACAGATGGAAAACTTACATCTCAAGGAGTCATTGAATAAGTCGGAGGATGAGCTGAAATTGGTTAAATCTGTGAATGATCAATTGAATGGTGATATTGCAAATGCAAAGGATGGTCTGTCTCAAAAGGAAAATGAGCTTTTGGAAGCCGGGCAGATCATAAATGAACGACAGAATGAGAAAAAAGAGCTGTATATACTAGTGGAGGATTTGACTAGTAAAAGTGATAATGCGAAGGTGGTGCTGGAAGATCAAGAGAAGCAAATTTTCAAACTACATGACGACAATGACCGTCATAGTAAAGAGATTGGATGCCTCCGTGAAGTGAATCAGAAGTTGGAGGTGGAACTATCGAAATTGCATGAAGAAGCTGAAAAAGCCAAAATTGAGGAGGAAAGGTTGGTCAGTGAACTAAAAAGGGGAAGAGAGGAGATAGAAATGTGGGTGACTCACGCAGCCACCCTCTTTGGAGAACTGCAGATCTCCTCCATTCGTGAAACATTTTTTGAAGGAAAGATCCGTGAGCTCATTGAAGTCTGCCAGATCCTTGAAGACAAAAGCGTCTCCAAAGGCCTGGAGAGTGAACAGATGAAAGAAAGAGTGGGCACATTGGAACATGAAAATGGAGAGCTACAAGCTCAGTTGGCTGCCTATATTCCAGCTGTCATCTCTCTGAAGGAGTGTACAACAGCCCTTGAGAATCATTCACTAATTAACACCAGATGTCATGAACTTGACACTGAAGCCTCAAAGGATGCCCTTCTGCAAGCTGAGAGCTCTCAAACGGATGGACATCAAATTGACAGAGTGTCAGATGGCATTTCAGGACTGCAGGATTTACAAAGAAGAATCAAAGCTATTGAAAAGGCTATGGTAGAAAAGGAAAGCCATCTTACTGCCAATCAGGAAGGTAAACAATTTGGGGACAGGTTCGGTAGTGAGAAGCCTGAAATCTCTGAAGTGGGGAACGAAGTTCTGACAAAGGACATCATTCTCGATCAGATATCAGAGTGTTCATCCTATGGGGTAAGCAGGAGAGAAACCACGGAGCCTGATGCTCAGATGATGGAGTTATGGGAGACCACTGACCAGGATGGCAGCATTGATTTGATGGTTGGCAAGGCCCAGAAGGCGACTACTGTACCGACTGACCAGAGTCAGACTGAAGCTATAAAGAAACATAAGAATAAATATCCCTCTTCAGAATCATTGGTTGAGAAAGAATATAGCGTTGACAAATTAGAGATCTCTAAGAGATTCTCTGAGCCCCGTCAAGAAGGCAACAAGAGAAGGATTCTAGAGAGACTTGATTCTGATGTGCAAAAGTTGACAAACCTTCAAATTACCGTGGAAGACCTGAAGAAGAAGGTGGACATTACTGAGAAGACCAAAAAGGGCAAAGGTATTGAATTTGGTACTGTAAAAGAGCAGCTGGATGAAGCCGAAGAAGCCATCACTAGGTTGTTTGATGCCAATAACAAATTGATGAAGAGTGTCGAAGATGAATTTGTGTCTCCTGATGGAGCTTCTGAGATAGTCCCAGATCACAGTGGGAGTGTCAGCAGAAGGAGACTGTCCGAACAAGCAAAAAGGGGGTCAGAGAAAATTGGTCGATTGCAGTTGGAGGTACAGAAACTGCAATTTCTTCTACTGAAGCTGGATGGTGAAAAGGAAAGCAAAGGGTCAACCAGGATCAAGGAGAGGAAAACAAGAGTTCTTCTGCGGGACTATCTCTATTCTGGCACTAGAATGAGCAACACAACCCCAAAGCGTAAGAAAGCTCCTTTTTGTGCATGCATGCCCCCAACTAAGGGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIP1

Protein Analysis

1871

Amino Acids

212.66

Weight (kDa)

4.98

Isoelectric Point (pI)

49.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 86 - 159 1.8e-37 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2119
AasI GACNNNNNNGTC 1 cut(s) 4352
Acc36I ACCTGC 2 cut(s) 554, 2119
AccB1I GGYRCC 1 cut(s) 3383
AccBSI CCGCTC 2 cut(s) 139, 1744
AccI GTMKAC 2 cut(s) 1717, 3520
AciI CCGC 6 cut(s) 137, 1532, 1744, 3244, 3302, 5515
AclWI GGATC 9 cut(s) 581, 781, 2144, 2157, 3552, 3565, 4303, 4330, 5492
AcoI YGGCCR 2 cut(s) 207, 850
AcyI GRCGYC 1 cut(s) 3384
AfaI GTAC 8 cut(s) 977, 1481, 2398, 3186, 4477, 4935, 5209, 5421
AfiI CCNNNNNNNGG 7 cut(s) 879, 1807, 3567, 3610, 5250, 5602, 5603
AflIII ACRYGT 1 cut(s) 2213
AhdI GACNNNNNGTC 1 cut(s) 4600
AhlI ACTAGT 2 cut(s) 3991, 4007
AjnI CCWGG 7 cut(s) 498, 1040, 1491, 1806, 4365, 4881, 5480
AjuI GAANNNNNNNTTGG 6 cut(s) 2468, 2500, 3720, 3752, 4112, 4144
Alw21I GWGCWC 6 cut(s) 98, 1030, 1839, 3711, 4320, 4571
Alw44I GTGCAC 1 cut(s) 1026
AlwI GGATC 9 cut(s) 581, 781, 2144, 2157, 3552, 3565, 4303, 4330, 5492
AlwNI CAGNNNCTG 6 cut(s) 1324, 1492, 1636, 1783, 3493, 5428
Ama87I CYCGRG 1 cut(s) 292
AoxI GGCC 5 cut(s) 207, 799, 850, 4363, 4914
ApaLI GTGCAC 1 cut(s) 1026
ApeKI GCWGC 8 cut(s) 1298, 1466, 1469, 1552, 4247, 4439, 4890, 5221
ArsI GACNNNNNNTTYG 2 cut(s) 5372, 5404
AseI ATTAAT 1 cut(s) 1386
Asp700I GAANNNNTTC 1 cut(s) 35
AspLEI GCGC 3 cut(s) 498, 3386, 3598
AspS9I GGNCC 4 cut(s) 799, 2041, 3348, 4915
AsuC2I CCSGG 2 cut(s) 143, 3943
AvaI CYCGRG 1 cut(s) 292
AvaII GGWCC 2 cut(s) 2041, 3348
BaeGI GKGCMC 4 cut(s) 493, 1030, 1198, 4400
BaeI ACNNNNGTAYC 6 cut(s) 168, 201, 959, 992, 4917, 4950
BalI TGGCCA 1 cut(s) 852
BamHI GGATCC 2 cut(s) 2149, 3557
BanI GGYRCC 1 cut(s) 3383
BanII GRGCYC 5 cut(s) 1839, 3711, 4320, 4571, 5061
BarI GAAGNNNNNNTAC 2 cut(s) 951, 983
BauI CACGAG 2 cut(s) 1023, 3482
BbsI GAAGAC 6 cut(s) 1127, 1601, 1941, 4350, 5151, 5183
Bbv12I GWGCWC 6 cut(s) 98, 1030, 1839, 3711, 4320, 4571
BbvI GCAGC 8 cut(s) 1285, 1453, 1456, 1539, 4259, 4426, 4902, 5233
BceAI ACGGC 1 cut(s) 1565
BcgI CGANNNNNNTGC 4 cut(s) 2258, 2292, 4015, 4049
BciT130I CCWGG 7 cut(s) 500, 1042, 1493, 1808, 4367, 4883, 5482
BclI TGATCA 5 cut(s) 75, 345, 475, 2592, 3871
BcnI CCSGG 2 cut(s) 143, 3943
BcuI ACTAGT 2 cut(s) 3991, 4007
BfmI CTRYAG 6 cut(s) 561, 1259, 1637, 2918, 4268, 4622
BfoI RGCGCY 1 cut(s) 3387
BfuAI ACCTGC 2 cut(s) 554, 2119
BglI GCCNNNNNGGC 1 cut(s) 4922
BisI GCNGC 9 cut(s) 137, 1299, 1467, 1470, 1553, 4248, 4440, 4891, 5222
BlpI GCTNAGC 1 cut(s) 1833
BlsI GCNGC 9 cut(s) 138, 1300, 1468, 1471, 1554, 4249, 4441, 4892, 5223
Bme1390I CCNGG 9 cut(s) 143, 500, 1042, 1493, 1808, 3943, 4367, 4883, 5482
Bme18I GGWCC 2 cut(s) 2041, 3348
BmeRI GACNNNNNGTC 1 cut(s) 4600
BmeT110I CYCGRG 1 cut(s) 292
BmgT120I GGNCC 4 cut(s) 799, 2041, 3348, 4915
BmiI GGNNCC 6 cut(s) 733, 2151, 3350, 3385, 3559, 4842
BmrFI CCNGG 9 cut(s) 143, 500, 1042, 1493, 1808, 3943, 4367, 4883, 5482
BmrI ACTGGG 4 cut(s) 495, 2425, 2794, 3346
BmuI ACTGGG 4 cut(s) 495, 2425, 2794, 3346
BoxI GACNNNNGTC 1 cut(s) 4947
BpiI GAAGAC 6 cut(s) 1127, 1601, 1941, 4350, 5151, 5183
BplI GAGNNNNNCTC 2 cut(s) 2672, 2704
BpmI CTGGAG 7 cut(s) 1230, 1346, 1364, 1460, 1823, 2717, 4388
Bpu1102I GCTNAGC 1 cut(s) 1833
BpuEI CTTGAG 6 cut(s) 1532, 1662, 2014, 2548, 3800, 4508
BpuMI CCSGG 2 cut(s) 143, 3943
BsaBI GATNNNNATC 3 cut(s) 1988, 2906, 4584
BsaHI GRCGYC 1 cut(s) 3384
BsaI GGTCTC 1 cut(s) 4865
BsaJI CCNNGG 6 cut(s) 513, 1041, 1806, 3136, 4836, 5139
BsaXI ACNNNNNCTCC 6 cut(s) 1637, 1667, 3767, 3797, 4175, 4205
Bsc4I CCNNNNNNNGG 7 cut(s) 879, 1807, 3567, 3610, 5250, 5602, 5603
Bse3DI GCAATG 2 cut(s) 3003, 3282
Bse8I GATNNNNATC 3 cut(s) 1988, 2906, 4584
BseBI CCWGG 7 cut(s) 500, 1042, 1493, 1808, 4367, 4883, 5482
BseDI CCNNGG 6 cut(s) 513, 1041, 1806, 3136, 4836, 5139
BseJI GATNNNNATC 3 cut(s) 1988, 2906, 4584
BseLI CCNNNNNNNGG 7 cut(s) 879, 1807, 3567, 3610, 5250, 5602, 5603
BseMI GCAATG 2 cut(s) 3003, 3282
BseRI GAGGAG 8 cut(s) 658, 661, 1382, 1550, 1553, 4196, 4235, 4267
BseSI GKGCMC 4 cut(s) 493, 1030, 1198, 4400
BseXI GCAGC 8 cut(s) 1285, 1453, 1456, 1539, 4259, 4426, 4902, 5233
BsgI GTGCAG 6 cut(s) 1284, 1538, 2700, 2880, 3165, 3464
BshFI GGCC 5 cut(s) 209, 801, 852, 4365, 4916
BshNI GGYRCC 1 cut(s) 3383
BsiHKAI GWGCWC 6 cut(s) 98, 1030, 1839, 3711, 4320, 4571
BsiHKCI CYCGRG 1 cut(s) 292
BsiSI CCGG 3 cut(s) 143, 210, 3942
BslFI GGGAC 7 cut(s) 214, 281, 675, 1059, 4730, 5315, 5531
BslI CCNNNNNNNGG 7 cut(s) 879, 1807, 3567, 3610, 5250, 5602, 5603
BsmBI CGTCTC 2 cut(s) 1994, 4360
BsmFI GGGAC 7 cut(s) 214, 281, 675, 1059, 4730, 5315, 5531
BsmI GAATGC 3 cut(s) 1795, 2515, 3412
BsnI GGCC 5 cut(s) 209, 801, 852, 4365, 4916
Bso31I GGTCTC 1 cut(s) 4865
BsoBI CYCGRG 1 cut(s) 292
Bsp1407I TGTACA 1 cut(s) 4475
Bsp1720I GCTNAGC 1 cut(s) 1833
Bsp19I CCATGG 1 cut(s) 513
BspACI CCGC 6 cut(s) 137, 1532, 1744, 3244, 3302, 5515
BspANI GGCC 5 cut(s) 209, 801, 852, 4365, 4916
BspHI TCATGA 2 cut(s) 2961, 4519
BspLI GGNNCC 6 cut(s) 733, 2151, 3350, 3385, 3559, 4842
BspMAI CTGCAG 5 cut(s) 565, 1641, 2922, 4272, 4626
BspMI ACCTGC 2 cut(s) 554, 2119
BspPI GGATC 9 cut(s) 581, 781, 2144, 2157, 3552, 3565, 4303, 4330, 5492
BspQI GCTCTTC 5 cut(s) 1680, 1734, 2061, 2727, 3699
BspT107I GGYRCC 1 cut(s) 3383
BspTNI GGTCTC 1 cut(s) 4865
BsrBI CCGCTC 2 cut(s) 139, 1744
BsrDI GCAATG 2 cut(s) 3003, 3282
BsrGI TGTACA 1 cut(s) 4475
BssECI CCNNGG 6 cut(s) 513, 1041, 1806, 3136, 4836, 5139
BssNI GRCGYC 1 cut(s) 3384
BssSI CACGAG 2 cut(s) 1023, 3482
BssT1I CCWWGG 2 cut(s) 513, 3136
Bst2BI CACGAG 2 cut(s) 1023, 3482
Bst2UI CCWGG 7 cut(s) 500, 1042, 1493, 1808, 4367, 4883, 5482
BstACI GRCGYC 1 cut(s) 3384
BstAPI GCANNNNNTGC 3 cut(s) 455, 1792, 3281
BstAUI TGTACA 1 cut(s) 4475
BstDSI CCRYGG 3 cut(s) 513, 4836, 5139
BstENI CCTNNNNNAGG 2 cut(s) 3565, 3608
BstH2I RGCGCY 1 cut(s) 3387
BstHHI GCGC 3 cut(s) 498, 3386, 3598
BstNI CCWGG 7 cut(s) 500, 1042, 1493, 1808, 4367, 4883, 5482
BstNSI RCATGY 6 cut(s) 253, 841, 1364, 2217, 5589, 5593
BstPAI GACNNNNGTC 1 cut(s) 4947
BstSCI CCNGG 9 cut(s) 141, 498, 1040, 1491, 1806, 3941, 4365, 4881, 5480
BstSFI CTRYAG 6 cut(s) 561, 1259, 1637, 2918, 4268, 4622
BstSLI GKGCMC 4 cut(s) 493, 1030, 1198, 4400
BstV1I GCAGC 8 cut(s) 1285, 1453, 1456, 1539, 4259, 4426, 4902, 5233
BstV2I GAAGAC 6 cut(s) 1127, 1601, 1941, 4350, 5151, 5183
BstXI CCANNNNNNTGG 1 cut(s) 4366
BsuRI GGCC 5 cut(s) 209, 801, 852, 4365, 4916
BtgI CCRYGG 3 cut(s) 513, 4836, 5139
BtsI GCAGTG 3 cut(s) 491, 1493, 1781
BveI ACCTGC 2 cut(s) 554, 2119
CaiI CAGNNNCTG 6 cut(s) 1324, 1492, 1636, 1783, 3493, 5428
CciI TCATGA 2 cut(s) 2961, 4519
CfoI GCGC 3 cut(s) 498, 3386, 3598
Cfr13I GGNCC 4 cut(s) 799, 2041, 3348, 4915
CseI GACGC 3 cut(s) 255, 830, 4342
Csp6I GTAC 8 cut(s) 976, 1480, 2397, 3185, 4476, 4934, 5208, 5420
CspCI CAANNNNNGTGG 2 cut(s) 4240, 4275
CviQI GTAC 8 cut(s) 976, 1480, 2397, 3185, 4476, 4934, 5208, 5420
DinI GGCGCC 1 cut(s) 3385
DraI TTTAAA 1 cut(s) 1402
DrdI GACNNNNNNGTC 1 cut(s) 4352
DriI GACNNNNNGTC 1 cut(s) 4600
DseDI GACNNNNNNGTC 1 cut(s) 4352
EaeI YGGCCR 2 cut(s) 207, 850
Eam1105I GACNNNNNGTC 1 cut(s) 4600
EciI GGCGGA 1 cut(s) 3317
Ecl136II GAGCTC 4 cut(s) 1837, 3709, 4318, 4569
Eco130I CCWWGG 2 cut(s) 513, 3136
Eco147I AGGCCT 1 cut(s) 4365
Eco24I GRGCYC 5 cut(s) 1839, 3711, 4320, 4571, 5061
Eco31I GGTCTC 1 cut(s) 4865
Eco32I GATATC 2 cut(s) 1503, 4797
Eco47I GGWCC 2 cut(s) 2041, 3348
Eco53kI GAGCTC 4 cut(s) 1837, 3709, 4318, 4569
Eco88I CYCGRG 1 cut(s) 292
EcoICRI GAGCTC 4 cut(s) 1837, 3709, 4318, 4569
EcoNI CCTNNNNNAGG 2 cut(s) 3565, 3608
EcoO109I RGGNCCY 2 cut(s) 799, 3348
EcoRI GAATTC 2 cut(s) 2302, 2491
EcoRII CCWGG 7 cut(s) 498, 1040, 1491, 1806, 4365, 4881, 5480
EcoRV GATATC 2 cut(s) 1503, 4797
EcoT14I CCWWGG 2 cut(s) 513, 3136
EcoT22I ATGCAT 2 cut(s) 2855, 5591
EcoT38I GRGCYC 5 cut(s) 1839, 3711, 4320, 4571, 5061
EgeI GGCGCC 1 cut(s) 3385
EheI GGCGCC 1 cut(s) 3385
ErhI CCWWGG 2 cut(s) 513, 3136
Esp3I CGTCTC 2 cut(s) 1994, 4360
FaqI GGGAC 7 cut(s) 214, 281, 675, 1059, 4730, 5315, 5531
FauI CCCGC 1 cut(s) 5508
FbaI TGATCA 5 cut(s) 75, 345, 475, 2592, 3871
FblI GTMKAC 2 cut(s) 1717, 3520
Fnu4HI GCNGC 9 cut(s) 137, 1299, 1467, 1470, 1553, 4248, 4440, 4891, 5222
FriOI GRGCYC 5 cut(s) 1839, 3711, 4320, 4571, 5061
Fsp4HI GCNGC 9 cut(s) 137, 1299, 1467, 1470, 1553, 4248, 4440, 4891, 5222
GlaI GCGC 3 cut(s) 497, 3385, 3597
GluI GCNGC 9 cut(s) 137, 1299, 1467, 1470, 1553, 4248, 4440, 4891, 5222
GsuI CTGGAG 7 cut(s) 1230, 1346, 1364, 1460, 1823, 2717, 4388
HaeII RGCGCY 1 cut(s) 3387
HaeIII GGCC 5 cut(s) 209, 801, 852, 4365, 4916
HapII CCGG 3 cut(s) 143, 210, 3942
HgaI GACGC 3 cut(s) 255, 830, 4342
HhaI GCGC 3 cut(s) 498, 3386, 3598
Hin1I GRCGYC 1 cut(s) 3384
Hin6I GCGC 3 cut(s) 496, 3384, 3596
HinP1I GCGC 3 cut(s) 496, 3384, 3596
HincII GTYRAC 4 cut(s) 3121, 5026, 5121, 5478
HindII GTYRAC 4 cut(s) 3121, 5026, 5121, 5478
HindIII AAGCTT 1 cut(s) 2978
HpaII CCGG 3 cut(s) 143, 210, 3942
Hpy99I CGWCG 1 cut(s) 193
Hsp92I GRCGYC 1 cut(s) 3384
HspAI GCGC 3 cut(s) 496, 3384, 3596
KasI GGCGCC 1 cut(s) 3383
Ksp22I TGATCA 5 cut(s) 75, 345, 475, 2592, 3871
LguI GCTCTTC 5 cut(s) 1680, 1734, 2061, 2727, 3699
LmnI GCTCC 7 cut(s) 144, 212, 704, 1842, 4840, 5315, 5578
Lsp1109I GCAGC 8 cut(s) 1285, 1453, 1456, 1539, 4259, 4426, 4902, 5233
MaeIII GTNAC 8 cut(s) 83, 169, 2093, 2890, 3398, 3650, 3713, 4237
MbiI CCGCTC 2 cut(s) 139, 1744
MfeI CAATTG 2 cut(s) 1437, 3875
MlsI TGGCCA 1 cut(s) 852
MluNI TGGCCA 1 cut(s) 852
Mly113I GGCGCC 1 cut(s) 3384
MmeI TCCRAC 8 cut(s) 1623, 1629, 2229, 2238, 2340, 3816, 4110, 5394
Mox20I TGGCCA 1 cut(s) 852
Mph1103I ATGCAT 2 cut(s) 2855, 5591
MroXI GAANNNNTTC 1 cut(s) 35
MscI TGGCCA 1 cut(s) 852
MslI CAYNNNNRTG 5 cut(s) 684, 3275, 3720, 4413, 5540
Msp20I TGGCCA 1 cut(s) 852
MspA1I CMGCKG 4 cut(s) 757, 3244, 4454, 5224
MspI CCGG 3 cut(s) 143, 210, 3942
MspR9I CCNGG 9 cut(s) 143, 500, 1042, 1493, 1808, 3943, 4367, 4883, 5482
MunI CAATTG 2 cut(s) 1437, 3875
Mva1269I GAATGC 3 cut(s) 1795, 2515, 3412
MvaI CCWGG 7 cut(s) 500, 1042, 1493, 1808, 4367, 4883, 5482
NarI GGCGCC 1 cut(s) 3384
NciI CCSGG 2 cut(s) 143, 3943
NcoI CCATGG 1 cut(s) 513
NlaIV GGNNCC 6 cut(s) 733, 2151, 3350, 3385, 3559, 4842
NmeAIII GCCGAG 1 cut(s) 2614
NmuCI GTSAC 5 cut(s) 83, 2093, 3398, 3713, 4237
NsiI ATGCAT 2 cut(s) 2855, 5591
NspI RCATGY 6 cut(s) 253, 841, 1364, 2217, 5589, 5593
PaeI GCATGC 3 cut(s) 841, 5589, 5593
PaeR7I CTCGAG 1 cut(s) 292
PagI TCATGA 2 cut(s) 2961, 4519
PaqCI CACCTGC 1 cut(s) 2119
PceI AGGCCT 1 cut(s) 4365
PciI ACATGT 1 cut(s) 2213
PciSI GCTCTTC 5 cut(s) 1680, 1734, 2061, 2727, 3699
PctI GAATGC 3 cut(s) 1795, 2515, 3412
PdmI GAANNNNTTC 1 cut(s) 35
PflFI GACNNNGTC 2 cut(s) 226, 3352
PkrI GCNGC 9 cut(s) 138, 1300, 1468, 1471, 1554, 4249, 4441, 4892, 5223
PluTI GGCGCC 1 cut(s) 3387
PpuMI RGGWCCY 1 cut(s) 3348
PscI ACATGT 1 cut(s) 2213
PshAI GACNNNNGTC 1 cut(s) 4947
PshBI ATTAAT 1 cut(s) 1386
Psp124BI GAGCTC 4 cut(s) 1839, 3711, 4320, 4571
Psp5II RGGWCCY 1 cut(s) 3348
Psp6I CCWGG 7 cut(s) 498, 1040, 1491, 1806, 4365, 4881, 5480
PspGI CCWGG 7 cut(s) 498, 1040, 1491, 1806, 4365, 4881, 5480
PspN4I GGNNCC 6 cut(s) 733, 2151, 3350, 3385, 3559, 4842
PspPI GGNCC 4 cut(s) 799, 2041, 3348, 4915
PspPPI RGGWCCY 1 cut(s) 3348
PstI CTGCAG 5 cut(s) 565, 1641, 2922, 4272, 4626
PstNI CAGNNNCTG 6 cut(s) 1324, 1492, 1636, 1783, 3493, 5428
PsyI GACNNNGTC 2 cut(s) 226, 3352
PvuII CAGCTG 3 cut(s) 757, 4454, 5224
RsaI GTAC 8 cut(s) 977, 1481, 2398, 3186, 4477, 4935, 5209, 5421
RsaNI GTAC 8 cut(s) 976, 1480, 2397, 3185, 4476, 4934, 5208, 5420
RseI CAYNNNNRTG 5 cut(s) 684, 3275, 3720, 4413, 5540
SacI GAGCTC 4 cut(s) 1839, 3711, 4320, 4571
SapI GCTCTTC 5 cut(s) 1680, 1734, 2061, 2727, 3699
SatI GCNGC 9 cut(s) 137, 1299, 1467, 1470, 1553, 4248, 4440, 4891, 5222
Sau96I GGNCC 4 cut(s) 799, 2041, 3348, 4915
SbfI CCTGCAGG 1 cut(s) 565
ScrFI CCNGG 9 cut(s) 143, 500, 1042, 1493, 1808, 3943, 4367, 4883, 5482
SdaI CCTGCAGG 1 cut(s) 565
SfcI CTRYAG 6 cut(s) 561, 1259, 1637, 2918, 4268, 4622
SfoI GGCGCC 1 cut(s) 3385
Sfr274I CTCGAG 1 cut(s) 292
SinI GGWCC 2 cut(s) 2041, 3348
SlaI CTCGAG 1 cut(s) 292
SmiMI CAYNNNNRTG 5 cut(s) 684, 3275, 3720, 4413, 5540
SmlI CTYRAG 7 cut(s) 292, 1511, 1677, 1993, 2527, 3815, 4487
SmoI CTYRAG 7 cut(s) 292, 1511, 1677, 1993, 2527, 3815, 4487
SpeI ACTAGT 2 cut(s) 3991, 4007
SphI GCATGC 3 cut(s) 841, 5589, 5593
Sse8387I CCTGCAGG 1 cut(s) 565
SseBI AGGCCT 1 cut(s) 4365
SsiI CCGC 6 cut(s) 137, 1532, 1744, 3244, 3302, 5515
SspDI GGCGCC 1 cut(s) 3383
SspI AATATT 1 cut(s) 3771
SstI GAGCTC 4 cut(s) 1839, 3711, 4320, 4571
StuI AGGCCT 1 cut(s) 4365
StyD4I CCNGG 9 cut(s) 141, 498, 1040, 1491, 1806, 3941, 4365, 4881, 5480
StyI CCWWGG 2 cut(s) 513, 3136
TatI WGTACW 3 cut(s) 1479, 3184, 4475
TauI GCSGC 1 cut(s) 139
TseFI GTSAC 5 cut(s) 83, 2093, 3398, 3713, 4237
TseI GCWGC 8 cut(s) 1298, 1466, 1469, 1552, 4247, 4439, 4890, 5221
Tsp45I GTSAC 5 cut(s) 83, 2093, 3398, 3713, 4237
TspGWI ACGGA 6 cut(s) 531, 1466, 4100, 4301, 4592, 4853
Tth111I GACNNNGTC 2 cut(s) 226, 3352
VneI GTGCAC 1 cut(s) 1026
VpaK11BI GGWCC 2 cut(s) 2041, 3348
VspI ATTAAT 1 cut(s) 1386
XagI CCTNNNNNAGG 2 cut(s) 3565, 3608
XbaI TCTAGA 2 cut(s) 242, 5089
XceI RCATGY 6 cut(s) 253, 841, 1364, 2217, 5589, 5593
XcmI CCANNNNNNNNNTGG 1 cut(s) 1205
XhoI CTCGAG 1 cut(s) 292
XmiI GTMKAC 2 cut(s) 1717, 3520
XmnI GAANNNNTTC 1 cut(s) 35
Zsp2I ATGCAT 2 cut(s) 2855, 5591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.