Rh6AG322100

KIP1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0005688
Physical Location & Seq
Reverse (-)
52220072 .. 52227761
7690 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG322100.1

Sequence Viewer

Length: 4395 bp
ATGGCGACTGTGTCCCAAGCAGATTCTAGACGCATGTATTCTTGGTGGTGGGACAGCCACATAAGCCCAAAGAACTCGAGATGGCTGAAGGAAAATCTTACAGATATGGATGCCAAAGTCAAACACATGATCAAACTCATTGAAGAAGATGCAGATTCCTTTGCTAGAAGGGCAGAAATGTATTACAAAAAACGCCCAGAACTAATGAAATTGGTTGAAGAGTTCTACCGAGCATACCGTGCGTTAGCTGAAAGATATGATCATGCAACTGGGGCACTGCGCCAGGCTCATCGAACCATGGCAGAGGCATTTCCCAACCAAGTTCCGTTTGTAGATGACTCGCCTGCAGGTTCTTCTGCTAGTGAGACTGATCCCCGAACACCTGAGATGCCAGCTCCTATACGAGCATTATTTGACCTTGATGAATTGCAAAAAGATGCTCTGGGACTCTCCTCCTCAACCCATTTCCATGCTCTCAAAAGGAATGGAGCTTTTAGTGAAGAATCTGACTCTGGAACCAGCCGAATTGGTTTGAAACAGCTGAATGATCTCCTTGGATCGGGAGAAGTAAGGGCGAAAAAGGGCCTCAACTTCCTTGATGCTGACGCAAAAGAACACAGCATGCAGAGCAATGGCCATGATCTTAAAAATCGAGCCTTGTTGGGGGATGATCGAGTGGGCAAAGCAGAGACAGAAATATCAAACTTAAAGAAAGCTCTTGCTAAACTAGAAGCTGAAAAGGAAGCTGGCTTGCTTCAGTACCAAGAGTGTTTAGAGAGAGTATCTAATTTGGAGTCTGAAGTCTCTCGTGCACAAGAGGATTCCAGGGGACTTAATGAACGAGCCGTTAAAGCTGAAGCTGAAGTTCAAACTACAAAGGAAGCACTTAACAAATTAGAGGCTGAAAGGGAAGCTAGTCTTCTTCAGTATCAGGAGTGCTTGGACAAAATCTCTAATCTGGAAAGCATCATCTCTTGTGCCCAAAAGGATGCTGGAGAGCTAAATGATCGAGCTAGTAGAGCTGAATTTGCATCTGAATCTCTACAGAAAGATCTTGAAAGGGTGGCATCTGAGAAAGAAGCTGCACTTGCACAATACGAACAGTGTCTGGAGAATATATCAAATCTGGAGGACAAACTACTGCAAGTTGAGGAGGATGCCAAGAGGATTAACGAGCGTGCTTTTAAAGCTGAACTCGAAGTTGAATCCTTGAAGCAAGCAATTGCCAATTTAACTGAAGAGAAGGAAGCTGCAGCTCTCCGGTACAAGCAATGCCTGGAAATGATATCTAATCTTGAGCATAAGATCTCTCATGCGGAGGAGGAGGCACTATGGCTACACTCTCAGATAGACGATGGGATTGCAAAGTTAAAGGATTCGGAAGAAAAGTGTCTTCTGCTGGTAAACTCAAATCAGAATCTGCAGTCGAAGTTGGAGTCTGTGGTGAAGCAAATGCAATCTCAAGGTGAAGAGCTTACAGAGAAGCAGAAGGAGTTGGGTAGACTTTGGGCTTGCATTCAAGAAGAGCGGTTGCGATTTATGGAGGCTGAAACTGCTTTCCAGACACTGCAGCATTTGCATTCCCAGTCCCAGGAGGAACTTAGATCTCTTGTAGCTGAGCTCCAGAATAGAGATTTGATTCTGAAGGACATGGAAGCACGAAGTCAGAGTTTGGATGATGAAGTCCAGAAGGTGAAGGAGGAAAACAAGAGCCTAAGTGAGATCAATTTGTCTTCATCTGTTTCAATAAAAGATCTGCAAGGTGAGATCTTAATCTTGAGGGAGACGATTAAGAAACTTGAAGATGAAGTTGAACTTCGAGTGGACCAAAGAAATGCTCTTCAGCAAGAGATATACTGTCTGAAAGAGGAACTCAATGACCTGAACAAGAAACACCAAGCTATGCTAGAGCAGGTGGAGTCAGTTGGCTTGGATCCAGTGTGCATCGGGTCATCTGTGAAGGAGTTGCAAGATGAGAACTTACAGCTCAAACAAACATGTGAGGCTGATAAAAGTGAGAAAGTGGCACTGTTGGAAAAGTTGGAAATCATGCAGAGACTTCGGGAGAAAAATGTACTTTTGGAGAATTCCCTTTCTGATTTGAATGTTGAGTTAGAAGGGGTTAGAGGGAAGGTAAAGGAGTTGGAACAATCATGTCAGTCTCTTCTGGCAGAAAAAGGTACTCTTCTTGCTGAAAATGGCACTCTGATTTCCCAGTTGCAGATTATGACTGAGAATTTAGAAAAATCATCAGAGAAGAACAAATTTTTGGAGAATTCTCTCTTTGATACGAATGCTGAACTGGAAGGCTTGAGTGTAAAATCAAAGAGCTTAGAAGAATCATGCCTACTGCTTGGAAATGATAAGACTGGTCTGATCACTGAGAGAGAGAGTTTAATTTTCGAGTTGGGCAGTACTCGGCAAAGACTGGAAGATCTGGAAAAAGGATGTGCAGAGATAGAAGAGAAACTCTCTGTTCTGGAGAAGGAAAGAGATTCTGCACTTTGTAAAGTGGAAGAGCTAAATGTATGCTTAGATTCTGAGAAGCAAAATCATGCCAGTTCTGTTGAGTTGAGGGAAACCCAGTTGGCTGAAATGGAACTGAAGATCTCTCATCTCCAAGCAGAAGGGATATGCAGGAAGAAAGAATTTGAAGAGGAACAAGACAAATCTGTTACTGCACAGATAGAAATCTTTGTCCTGCAGAAATGTGTAGAAGATCTGGAAGAGAAGAACTTATCCCTCATGATTGAGCGTCAAAAGCTTTTGGGGGCATCCGCAATGTCAGAGAAGCTGATTTCTGTCCTAGAGCATGGCAAACTTGAACAACAGAAGGAAATCAAGTCATTGTTTGTGCAAATTAAAGCACTGAGAATGGGGCTGTATCAGGTGTTGAAGAATGTTGACATTGATGCAAACCTTGGGTGTGCAGAAAAGGATGAGCAAGACCAAGCACTCCTTAATCATATACTTATCAAACTTCAAGACAAACAAAATTCTTTCTCTGAAAGTTGTGATGAAAACCAGCGGTTGCTTATTGAGAACTCTGTTCTCCTATCAATGCTTGCCCAAATGAAACTAGATGCGGACTGTTTTATGAGGGAAAGAAACACTCTTGACCATGAGTTCAGGACCCAGTCTGAGAAGTTCTTGGTGTTGGAGAGTGGCGCCCAAAGACTTCGTGACATGAATGCAGAATTGAATTTGAAGGTAGTGGAGGGAGAACACAGAGAGGGAGTTTTGAGGACTGAAATAGATAATCTGCACGAGCAGTTGCTGGACTTGCAAAGCATTTACAAGAGTCTACAAAAGGAAAATTCCCAGATGGTTGAAGATAAGGGATCCTTGAAAAGGACGGTCTTGAATTTGGAGGAAGAGGCGCGTAACCGAGAAGAGGATAAACGCGTCATGTTTGCTGAAACAATATATTATAGTAACCTCTCCCTCGTTTTCGATGATATTATTTCCCAAAAGCAACTGGAACTGGAAGAGCTCAGTCACAATTATGATGAACTTCATCTTGGCAATAATGACCTGAAAGAGAAGGTGAGAATATTGGAGGGGGGGTTAGAAGTTATACAGATGGAAAACTTACATCTCAAGGAGTCATTGAATAAGTCGGAGGATGAGCTGAAAATGGTTAAATCTGTGAATGATCAATTGAATGGTGATATTGCAAATGCAAAGGATGGTTTGTCTCAAAAGGAAAATGAGCTTTTGGAAGCCGGGCAGATCATAAATGAACTACAGAATGAGAAAAAAGAGCTGTATATACTGGTGGAGGATTTGACTAGTAAAAGTGATAATGTGAAGGTGGTGCTGGAAGATCAAGAGAAGCAAATTTTCAAACTACATGACGACAATGACCGTCATAGTAAAGAGATTGGATGCCTCCGTGAAGTGAATCAGAAGTTGGAGGTGGAACTATCGAAATTGCATGAAGAAGCTGAAAAAGCCAAAATTGAGGAGGAAAGGTTGGTCAGTGAACTAAAAAGGGGAAGAGAGGAGATAGAAATGTGGGTGACTCACGCAGCCACCCTCTTTGGAGAACTGCAGATCTCCTCCATTCGTGAAACATTGTTTGAAGGAAAGATCCGTGAGCTCATTGAAGCCTGTCAGATCCTTGAAGACAAAAGCGTTTCCAAAGGTCTGGAGAGTGAACAGATGAAAGAAAGAGTCGGCACATTGGAACATGAAAATGGAGAGCTACAAGCTCAGTTGGCTGCCTATATTCCAGCTGTCATCTCTCTGAATGAGTGTACAACAGCCCTTGAGAATCATTCACTTATTAACATCAGATGTCATAAACTTGACACTGAAGCCTCAGAGGTAATTTTCAATTCTGTTAATATATTTAACTTCCAAGTTTTCTGGGACTTGAGTGATAATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIP1

Protein Analysis

1464

Amino Acids

167.15

Weight (kDa)

4.84

Isoelectric Point (pI)

50.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 14 - 87 1.3e-37 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1903
Acc36I ACCTGC 2 cut(s) 338, 1903
AccB1I GGYRCC 1 cut(s) 3167
AccBSI CCGCTC 1 cut(s) 1528
AccI GTMKAC 2 cut(s) 1501, 3304
AccII CGCG 2 cut(s) 3382, 3405
AciI CCGC 5 cut(s) 1316, 1528, 2778, 3028, 3086
AclWI GGATC 8 cut(s) 365, 565, 1928, 1941, 3336, 3349, 4087, 4114
AcoI YGGCCR 1 cut(s) 634
AcyI GRCGYC 1 cut(s) 3168
AfaI GTAC 6 cut(s) 761, 1265, 2076, 2182, 2416, 4261
AfiI CCNNNNNNNGG 5 cut(s) 559, 663, 1591, 3351, 3394
AflIII ACRYGT 2 cut(s) 1997, 3403
AhlI ACTAGT 1 cut(s) 3791
AjnI CCWGG 4 cut(s) 282, 824, 1275, 1590
AjuI GAANNNNNNNTTGG 6 cut(s) 2252, 2284, 3504, 3536, 3896, 3928
Alw21I GWGCWC 4 cut(s) 814, 1623, 3495, 4104
Alw26I GTCTC 7 cut(s) 359, 683, 808, 1778, 2050, 2166, 3702
Alw44I GTGCAC 1 cut(s) 810
AlwI GGATC 8 cut(s) 365, 565, 1928, 1941, 3336, 3349, 4087, 4114
AlwNI CAGNNNCTG 4 cut(s) 1108, 1420, 1567, 3277
Ama87I CYCGRG 1 cut(s) 76
AoxI GGCC 2 cut(s) 583, 634
ApaLI GTGCAC 1 cut(s) 810
ApeKI GCWGC 6 cut(s) 1082, 1250, 1253, 1570, 4031, 4223
ArsI GACNNNNNNTTYG 2 cut(s) 1421, 1453
AspLEI GCGC 3 cut(s) 282, 3170, 3382
AspS9I GGNCC 3 cut(s) 583, 1825, 3132
AsuC2I CCSGG 1 cut(s) 3727
AsuHPI GGTGA 7 cut(s) 1456, 1478, 1705, 1775, 3559, 3680, 4033
AvaI CYCGRG 1 cut(s) 76
AvaII GGWCC 2 cut(s) 1825, 3132
BaeGI GKGCMC 3 cut(s) 277, 814, 982
BalI TGGCCA 1 cut(s) 636
BamHI GGATCC 2 cut(s) 1933, 3341
BanI GGYRCC 1 cut(s) 3167
BanII GRGCYC 3 cut(s) 1623, 3495, 4104
BauI CACGAG 2 cut(s) 807, 3266
BbsI GAAGAC 4 cut(s) 911, 1385, 1725, 4134
Bbv12I GWGCWC 4 cut(s) 814, 1623, 3495, 4104
BbvI GCAGC 6 cut(s) 1069, 1237, 1265, 1582, 4043, 4210
BccI CCATC 5 cut(s) 75, 1349, 3319, 3577, 3683
BceAI ACGGC 1 cut(s) 830
BcgI CGANNNNNNTGC 4 cut(s) 1343, 1377, 2042, 2076
BciT130I CCWGG 4 cut(s) 284, 826, 1277, 1592
BclI TGATCA 4 cut(s) 129, 259, 2376, 3655
BcnI CCSGG 1 cut(s) 3727
BcoDI GTCTC 7 cut(s) 359, 683, 808, 1778, 2050, 2166, 3702
BcuI ACTAGT 1 cut(s) 3791
BfmI CTRYAG 8 cut(s) 345, 1043, 1251, 1421, 1568, 2702, 3746, 4052
BfoI RGCGCY 1 cut(s) 3171
BfuAI ACCTGC 2 cut(s) 338, 1903
BglII AGATCT 9 cut(s) 1051, 1305, 1604, 1753, 1767, 2434, 2607, 2719, 4056
BisI GCNGC 6 cut(s) 1083, 1251, 1254, 1571, 4032, 4224
BlpI GCTNAGC 1 cut(s) 1617
BlsI GCNGC 6 cut(s) 1084, 1252, 1255, 1572, 4033, 4225
BmcAI AGTACT 1 cut(s) 2416
Bme1390I CCNGG 5 cut(s) 284, 826, 1277, 1592, 3727
Bme18I GGWCC 2 cut(s) 1825, 3132
BmeT110I CYCGRG 1 cut(s) 76
BmgT120I GGNCC 3 cut(s) 583, 1825, 3132
BmiI GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
BmrFI CCNGG 5 cut(s) 284, 826, 1277, 1592, 3727
BmrI ACTGGG 5 cut(s) 279, 1579, 2209, 2578, 3130
BmuI ACTGGG 5 cut(s) 279, 1579, 2209, 2578, 3130
BpiI GAAGAC 4 cut(s) 911, 1385, 1725, 4134
BplI GAGNNNNNCTC 2 cut(s) 2456, 2488
BpmI CTGGAG 6 cut(s) 1014, 1130, 1148, 1607, 2501, 4172
Bpu1102I GCTNAGC 1 cut(s) 1617
BpuEI CTTGAG 6 cut(s) 1316, 1446, 1798, 2332, 3584, 4292
BpuMI CCSGG 1 cut(s) 3727
BsaBI GATNNNNATC 2 cut(s) 1772, 2690
BsaHI GRCGYC 1 cut(s) 3168
BsaJI CCNNGG 5 cut(s) 297, 553, 825, 1590, 2920
BsaWI WCCGGW 1 cut(s) 1260
BsaXI ACNNNNNCTCC 4 cut(s) 3551, 3581, 3959, 3989
Bsc4I CCNNNNNNNGG 5 cut(s) 559, 663, 1591, 3351, 3394
Bse3DI GCAATG 3 cut(s) 637, 1277, 2787
Bse8I GATNNNNATC 2 cut(s) 1772, 2690
BseBI CCWGG 4 cut(s) 284, 826, 1277, 1592
BseDI CCNNGG 5 cut(s) 297, 553, 825, 1590, 2920
BseJI GATNNNNATC 2 cut(s) 1772, 2690
BseLI CCNNNNNNNGG 5 cut(s) 559, 663, 1591, 3351, 3394
BseMI GCAATG 3 cut(s) 637, 1277, 2787
BseRI GAGGAG 8 cut(s) 442, 445, 1166, 1334, 1337, 3980, 4019, 4051
BseSI GKGCMC 3 cut(s) 277, 814, 982
BseXI GCAGC 6 cut(s) 1069, 1237, 1265, 1582, 4043, 4210
BsgI GTGCAG 6 cut(s) 1068, 2472, 2484, 2664, 2949, 3248
Bsh1236I CGCG 2 cut(s) 3382, 3405
BshFI GGCC 2 cut(s) 585, 636
BshNI GGYRCC 1 cut(s) 3167
BsiHKAI GWGCWC 4 cut(s) 814, 1623, 3495, 4104
BsiHKCI CYCGRG 1 cut(s) 76
BsiSI CCGG 2 cut(s) 1261, 3726
BslFI GGGAC 5 cut(s) 65, 459, 843, 1573, 4388
BslI CCNNNNNNNGG 5 cut(s) 559, 663, 1591, 3351, 3394
BsmAI GTCTC 7 cut(s) 359, 683, 808, 1778, 2050, 2166, 3702
BsmBI CGTCTC 1 cut(s) 1778
BsmFI GGGAC 5 cut(s) 65, 459, 843, 1573, 4388
BsmI GAATGC 4 cut(s) 1515, 1579, 2299, 3196
BsnI GGCC 2 cut(s) 585, 636
BsoBI CYCGRG 1 cut(s) 76
Bsp1286I GDGCHC 6 cut(s) 277, 814, 982, 1623, 3495, 4104
Bsp1407I TGTACA 1 cut(s) 4259
Bsp1720I GCTNAGC 1 cut(s) 1617
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 5 cut(s) 1316, 1528, 2778, 3028, 3086
BspANI GGCC 2 cut(s) 585, 636
BspFNI CGCG 2 cut(s) 3382, 3405
BspHI TCATGA 1 cut(s) 2745
BspLI GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
BspMAI CTGCAG 6 cut(s) 349, 1255, 1425, 1572, 2706, 4056
BspMI ACCTGC 2 cut(s) 338, 1903
BspPI GGATC 8 cut(s) 365, 565, 1928, 1941, 3336, 3349, 4087, 4114
BspQI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
BspT107I GGYRCC 1 cut(s) 3167
BsrBI CCGCTC 1 cut(s) 1528
BsrDI GCAATG 3 cut(s) 637, 1277, 2787
BsrGI TGTACA 1 cut(s) 4259
BssECI CCNNGG 5 cut(s) 297, 553, 825, 1590, 2920
BssNI GRCGYC 1 cut(s) 3168
BssSI CACGAG 2 cut(s) 807, 3266
BssT1I CCWWGG 3 cut(s) 297, 553, 2920
Bst2BI CACGAG 2 cut(s) 807, 3266
Bst2UI CCWGG 4 cut(s) 284, 826, 1277, 1592
Bst4CI ACNGT 8 cut(s) 10, 239, 1104, 1859, 2031, 3092, 3358, 3869
BstACI GRCGYC 1 cut(s) 3168
BstAPI GCANNNNNTGC 2 cut(s) 239, 1576
BstAUI TGTACA 1 cut(s) 4259
BstC8I GCNNGC 9 cut(s) 345, 393, 623, 748, 752, 1179, 1218, 1513, 3066
BstDSI CCRYGG 1 cut(s) 297
BstENI CCTNNNNNAGG 1 cut(s) 3349
BstFNI CGCG 2 cut(s) 3382, 3405
BstH2I RGCGCY 1 cut(s) 3171
BstHHI GCGC 3 cut(s) 282, 3170, 3382
BstMAI GTCTC 7 cut(s) 359, 683, 808, 1778, 2050, 2166, 3702
BstNI CCWGG 4 cut(s) 284, 826, 1277, 1592
BstNSI RCATGY 3 cut(s) 37, 625, 2001
BstSCI CCNGG 5 cut(s) 282, 824, 1275, 1590, 3725
BstSFI CTRYAG 8 cut(s) 345, 1043, 1251, 1421, 1568, 2702, 3746, 4052
BstSLI GKGCMC 3 cut(s) 277, 814, 982
BstUI CGCG 2 cut(s) 3382, 3405
BstV1I GCAGC 6 cut(s) 1069, 1237, 1265, 1582, 4043, 4210
BstV2I GAAGAC 4 cut(s) 911, 1385, 1725, 4134
BstXI CCANNNNNNTGG 1 cut(s) 4150
BsuRI GGCC 2 cut(s) 585, 636
BtgI CCRYGG 1 cut(s) 297
BtsI GCAGTG 2 cut(s) 275, 1565
BtsIMutI CAGTG 9 cut(s) 275, 1109, 1565, 1944, 2027, 2379, 2867, 3988, 4314
BveI ACCTGC 2 cut(s) 338, 1903
Cac8I GCNNGC 9 cut(s) 345, 393, 623, 748, 752, 1179, 1218, 1513, 3066
CaiI CAGNNNCTG 4 cut(s) 1108, 1420, 1567, 3277
CciI TCATGA 1 cut(s) 2745
CfoI GCGC 3 cut(s) 282, 3170, 3382
Cfr13I GGNCC 3 cut(s) 583, 1825, 3132
CseI GACGC 4 cut(s) 39, 614, 2744, 3394
Csp6I GTAC 6 cut(s) 760, 1264, 2075, 2181, 2415, 4260
CspCI CAANNNNNGTGG 2 cut(s) 4024, 4059
CviQI GTAC 6 cut(s) 760, 1264, 2075, 2181, 2415, 4260
DinI GGCGCC 1 cut(s) 3169
DraI TTTAAA 1 cut(s) 1186
EaeI YGGCCR 1 cut(s) 634
Ecl136II GAGCTC 3 cut(s) 1621, 3493, 4102
Eco130I CCWWGG 3 cut(s) 297, 553, 2920
Eco24I GRGCYC 3 cut(s) 1623, 3495, 4104
Eco32I GATATC 1 cut(s) 1287
Eco47I GGWCC 2 cut(s) 1825, 3132
Eco53kI GAGCTC 3 cut(s) 1621, 3493, 4102
Eco88I CYCGRG 1 cut(s) 76
EcoICRI GAGCTC 3 cut(s) 1621, 3493, 4102
EcoNI CCTNNNNNAGG 1 cut(s) 3349
EcoO109I RGGNCCY 2 cut(s) 583, 3132
EcoRI GAATTC 2 cut(s) 2086, 2275
EcoRII CCWGG 4 cut(s) 282, 824, 1275, 1590
EcoRV GATATC 1 cut(s) 1287
EcoT14I CCWWGG 3 cut(s) 297, 553, 2920
EcoT38I GRGCYC 3 cut(s) 1623, 3495, 4104
EgeI GGCGCC 1 cut(s) 3169
EheI GGCGCC 1 cut(s) 3169
ErhI CCWWGG 3 cut(s) 297, 553, 2920
Esp3I CGTCTC 1 cut(s) 1778
FaqI GGGAC 5 cut(s) 65, 459, 843, 1573, 4388
FbaI TGATCA 4 cut(s) 129, 259, 2376, 3655
FblI GTMKAC 2 cut(s) 1501, 3304
Fnu4HI GCNGC 6 cut(s) 1083, 1251, 1254, 1571, 4032, 4224
FriOI GRGCYC 3 cut(s) 1623, 3495, 4104
Fsp4HI GCNGC 6 cut(s) 1083, 1251, 1254, 1571, 4032, 4224
GlaI GCGC 3 cut(s) 281, 3169, 3381
GluI GCNGC 6 cut(s) 1083, 1251, 1254, 1571, 4032, 4224
GsuI CTGGAG 6 cut(s) 1014, 1130, 1148, 1607, 2501, 4172
HaeII RGCGCY 1 cut(s) 3171
HaeIII GGCC 2 cut(s) 585, 636
HapII CCGG 2 cut(s) 1261, 3726
HgaI GACGC 4 cut(s) 39, 614, 2744, 3394
HhaI GCGC 3 cut(s) 282, 3170, 3382
Hin1I GRCGYC 1 cut(s) 3168
Hin6I GCGC 3 cut(s) 280, 3168, 3380
HinP1I GCGC 3 cut(s) 280, 3168, 3380
HincII GTYRAC 1 cut(s) 2905
HindII GTYRAC 1 cut(s) 2905
HindIII AAGCTT 1 cut(s) 2762
HpaII CCGG 2 cut(s) 1261, 3726
HphI GGTGA 7 cut(s) 1456, 1478, 1705, 1775, 3559, 3680, 4033
Hpy166II GTNNAC 9 cut(s) 812, 1405, 1502, 1825, 2905, 3305, 3986, 4160, 4260
Hpy8I GTNNAC 9 cut(s) 812, 1405, 1502, 1825, 2905, 3305, 3986, 4160, 4260
HpyCH4III ACNGT 8 cut(s) 10, 239, 1104, 1859, 2031, 3092, 3358, 3869
Hsp92I GRCGYC 1 cut(s) 3168
HspAI GCGC 3 cut(s) 280, 3168, 3380
KasI GGCGCC 1 cut(s) 3167
Ksp22I TGATCA 4 cut(s) 129, 259, 2376, 3655
LguI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
LmnI GCTCC 3 cut(s) 400, 488, 1626
Lsp1109I GCAGC 6 cut(s) 1069, 1237, 1265, 1582, 4043, 4210
MaeIII GTNAC 6 cut(s) 2674, 3182, 3383, 3434, 3497, 4021
MbiI CCGCTC 1 cut(s) 1528
MfeI CAATTG 2 cut(s) 1221, 3659
MhlI GDGCHC 6 cut(s) 277, 814, 982, 1623, 3495, 4104
MlsI TGGCCA 1 cut(s) 636
MluI ACGCGT 1 cut(s) 3403
MluNI TGGCCA 1 cut(s) 636
Mly113I GGCGCC 1 cut(s) 3168
MmeI TCCRAC 7 cut(s) 1413, 2013, 2022, 2124, 3138, 3600, 3894
Mox20I TGGCCA 1 cut(s) 636
MscI TGGCCA 1 cut(s) 636
MslI CAYNNNNRTG 3 cut(s) 468, 3504, 4197
Msp20I TGGCCA 1 cut(s) 636
MspA1I CMGCKG 3 cut(s) 541, 3028, 4238
MspI CCGG 2 cut(s) 1261, 3726
MspR9I CCNGG 5 cut(s) 284, 826, 1277, 1592, 3727
MunI CAATTG 2 cut(s) 1221, 3659
Mva1269I GAATGC 4 cut(s) 1515, 1579, 2299, 3196
MvaI CCWGG 4 cut(s) 284, 826, 1277, 1592
MvnI CGCG 2 cut(s) 3382, 3405
NarI GGCGCC 1 cut(s) 3168
NciI CCSGG 1 cut(s) 3727
NcoI CCATGG 1 cut(s) 297
NlaIV GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
NmeAIII GCCGAG 1 cut(s) 2398
NmuCI GTSAC 3 cut(s) 3182, 3497, 4021
NspI RCATGY 3 cut(s) 37, 625, 2001
PaeI GCATGC 1 cut(s) 625
PaeR7I CTCGAG 1 cut(s) 76
PagI TCATGA 1 cut(s) 2745
PaqCI CACCTGC 1 cut(s) 1903
PciI ACATGT 1 cut(s) 1997
PciSI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
PctI GAATGC 4 cut(s) 1515, 1579, 2299, 3196
PflFI GACNNNGTC 2 cut(s) 10, 3136
PkrI GCNGC 6 cut(s) 1084, 1252, 1255, 1572, 4033, 4225
PluTI GGCGCC 1 cut(s) 3171
PpuMI RGGWCCY 1 cut(s) 3132
PscI ACATGT 1 cut(s) 1997
Psp124BI GAGCTC 3 cut(s) 1623, 3495, 4104
Psp5II RGGWCCY 1 cut(s) 3132
Psp6I CCWGG 4 cut(s) 282, 824, 1275, 1590
PspGI CCWGG 4 cut(s) 282, 824, 1275, 1590
PspN4I GGNNCC 5 cut(s) 517, 1935, 3134, 3169, 3343
PspPI GGNCC 3 cut(s) 583, 1825, 3132
PspPPI RGGWCCY 1 cut(s) 3132
PstI CTGCAG 6 cut(s) 349, 1255, 1425, 1572, 2706, 4056
PstNI CAGNNNCTG 4 cut(s) 1108, 1420, 1567, 3277
PsyI GACNNNGTC 2 cut(s) 10, 3136
PvuII CAGCTG 2 cut(s) 541, 4238
RsaI GTAC 6 cut(s) 761, 1265, 2076, 2182, 2416, 4261
RsaNI GTAC 6 cut(s) 760, 1264, 2075, 2181, 2415, 4260
RseI CAYNNNNRTG 3 cut(s) 468, 3504, 4197
SacI GAGCTC 3 cut(s) 1623, 3495, 4104
SapI GCTCTTC 5 cut(s) 1464, 1518, 1845, 2511, 3483
SatI GCNGC 6 cut(s) 1083, 1251, 1254, 1571, 4032, 4224
Sau96I GGNCC 3 cut(s) 583, 1825, 3132
SbfI CCTGCAGG 1 cut(s) 349
ScaI AGTACT 1 cut(s) 2416
ScrFI CCNGG 5 cut(s) 284, 826, 1277, 1592, 3727
SdaI CCTGCAGG 1 cut(s) 349
SduI GDGCHC 6 cut(s) 277, 814, 982, 1623, 3495, 4104
SfcI CTRYAG 8 cut(s) 345, 1043, 1251, 1421, 1568, 2702, 3746, 4052
SfoI GGCGCC 1 cut(s) 3169
Sfr274I CTCGAG 1 cut(s) 76
SinI GGWCC 2 cut(s) 1825, 3132
SlaI CTCGAG 1 cut(s) 76
SmiMI CAYNNNNRTG 3 cut(s) 468, 3504, 4197
SmlI CTYRAG 8 cut(s) 76, 1295, 1461, 1777, 2311, 3599, 4271, 4378
SmoI CTYRAG 8 cut(s) 76, 1295, 1461, 1777, 2311, 3599, 4271, 4378
SpeI ACTAGT 1 cut(s) 3791
SphI GCATGC 1 cut(s) 625
Sse8387I CCTGCAGG 1 cut(s) 349
SsiI CCGC 5 cut(s) 1316, 1528, 2778, 3028, 3086
SspDI GGCGCC 1 cut(s) 3167
SspI AATATT 1 cut(s) 3555
SstI GAGCTC 3 cut(s) 1623, 3495, 4104
StyD4I CCNGG 5 cut(s) 282, 824, 1275, 1590, 3725
StyI CCWWGG 3 cut(s) 297, 553, 2920
TaaI ACNGT 8 cut(s) 10, 239, 1104, 1859, 2031, 3092, 3358, 3869
TatI WGTACW 3 cut(s) 2074, 2414, 4259
TscAI CASTG 9 cut(s) 282, 1109, 1572, 1944, 2034, 2386, 2874, 3988, 4321
TseFI GTSAC 3 cut(s) 3182, 3497, 4021
TseI GCWGC 6 cut(s) 1082, 1250, 1253, 1570, 4031, 4223
Tsp45I GTSAC 3 cut(s) 3182, 3497, 4021
TspGWI ACGGA 3 cut(s) 315, 3884, 4085
TspRI CASTG 9 cut(s) 282, 1109, 1572, 1944, 2034, 2386, 2874, 3988, 4321
Tth111I GACNNNGTC 2 cut(s) 10, 3136
VneI GTGCAC 1 cut(s) 810
VpaK11BI GGWCC 2 cut(s) 1825, 3132
XagI CCTNNNNNAGG 1 cut(s) 3349
XbaI TCTAGA 1 cut(s) 26
XceI RCATGY 3 cut(s) 37, 625, 2001
XcmI CCANNNNNNNNNTGG 1 cut(s) 989
XhoI CTCGAG 1 cut(s) 76
XmiI GTMKAC 2 cut(s) 1501, 3304
ZrmI AGTACT 1 cut(s) 2416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.