AT1G07250

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
2225759 .. 2227608
1850 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G07250.1

Sequence Viewer

Length: 1440 bp
ATGGTGAAGGAAACAGAGCTAATCTTCATTCCAGTTCCATCCACAGGTCATATTCTCGTCCATATTGAATTCGCCAAGCGTCTCATCAATCTCGACCATCGGATCCACACCATCACTATTCTCAACTTATCCTCACCCTCTTCTCCTCACGCCTCCGTCTTCGCCAGATCTCTCATCGCTTCCCAGCCCAAAATCCGTCTCCACGACCTTCCCCCTATCCAAGATCCTCCTCCATTCGATCTTTACCAAAGAGCTCCCGAAGCTTACATAGTAAAACTCATCAAGAAAAATACTCCTCTGATAAAAGACGCCGTCTCCAGCATCGTCGCGTCGCGTCGTGGAGGCTCAGATTCGGTTCAAGTCGCCGGTTTGGTTCTCGATTTATTCTGCAATTCATTGGTAAAAGATGTTGGCAACGAGCTTAATCTTCCTTCTTACATATACCTTACGTGTAACGCTAGATACTTGGGGATGATGAAATATATTCCGGATCGGCATCGGAAAATCGCATCTGAGTTCGATTTGAGCTCCGGCGATGAAGAATTGCCGGTTCCGGGATTCATAAACGCTATTCCGACGAAATTTATGCCGCCTGGATTGTTCAATAAGGAAGCTTACGAGGCTTACGTAGAGCTAGCGCCGAGATTCGCAGATGCGAAGGGTATTTTGGTTAATTCCTTCACGGAGCTTGAGCCGCACCCGTTTGACTATTTCTCTCACCTGGAGAAATTCCCTCCGGTTTACCCGGTCGGACCGATTCTCAGCTTGAAAGATCGAGCGAGTCCGAACGAAGAAGCAGTCGATCGGGATCAGATCGTTGGGTGGCTCGATGATCAGCCGGAGTCATCGGTGGTGTTCCTCTGTTTCGGGAGCAGAGGAAGCGTTGATGAGCCGCAAGTGAAGGAGATAGCTCGAGCTTTGGAACTCGTCGGCTGCAGATTTCTTTGGTCAATTAGAACAAGCGGCGACGTCGAGACGAATCCTAACGATGTGTTGCCGGAGGGGTTCATGGGCCGAGTAGCAGGCCGAGGTTTGGTATGTGGTTGGGCTCCACAAGTGGAAGTGTTGGCCCATAAAGCAATAGGAGGATTTGTGTCTCACTGTGGTTGGAACTCCACGCTTGAAAGCTTATGGTTCGGGGTTCCTGTCGCAACGTGGCCGATGTACGCAGAGCAACAGCTTAACGCCTTCACGCTGGTGAAAGAGCTTGGGCTTGCGGTGGACCTGCGGATGGATTACGTGTCGAGTCGTGGGGGTTTGGTGACTTGTGATGAGATAGCCAGAGCCGTACGATCTTTGATGGACGGTGGAGATGAGAAGAGAAAAAAGGTTAAGGAGATGGCTGATGCGGCAAGGAAGGCTTTGATGGATGGAGGATCGTCTTCTTTGGCAACTGCTCGATTCATCGCAGAATTGTTTGAAGATGGTTCGTCGTGCTAA

Protein Analysis

479

Amino Acids

52.84

Weight (kDa)

5.56

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 281 - 418 1.8e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 972
Acc36I ACCTGC 1 cut(s) 1233
AccII CGCG 2 cut(s) 329, 334
AccIII TCCGGA 1 cut(s) 487
AciI CCGC 7 cut(s) 590, 695, 893, 963, 1217, 1228, 1349
AclWI GGATC 6 cut(s) 97, 110, 218, 498, 816, 1384
AcoI YGGCCR 1 cut(s) 1157
AcsI RAATTY 3 cut(s) 68, 581, 728
AcyI GRCGYC 2 cut(s) 309, 969
AfaI GTAC 2 cut(s) 1166, 1290
AfiI CCNNNNNNNGG 4 cut(s) 44, 554, 1033, 1231
AflIII ACRYGT 2 cut(s) 449, 1239
AgsI TTSAA 6 cut(s) 68, 359, 604, 769, 1124, 1421
AjnI CCWGG 2 cut(s) 592, 720
AjuI GAANNNNNNNTTGG 2 cut(s) 650, 682
AleI CACNNNNGTG 1 cut(s) 1196
Alw21I GWGCWC 2 cut(s) 256, 530
Alw26I GTCTC 5 cut(s) 86, 203, 319, 968, 1101
AlwI GGATC 6 cut(s) 97, 110, 218, 498, 816, 1384
Ama87I CYCGRG 1 cut(s) 912
Aor13HI TCCGGA 1 cut(s) 487
AoxI GGCC 4 cut(s) 1012, 1024, 1068, 1157
ApeKI GCWGC 1 cut(s) 933
ApoI RAATTY 3 cut(s) 68, 581, 728
ArsI GACNNNNNNTTYG 2 cut(s) 783, 815
AspLEI GCGC 1 cut(s) 640
AspS9I GGNCC 4 cut(s) 752, 1012, 1069, 1222
AsuC2I CCSGG 2 cut(s) 555, 746
AsuHPI GGTGA 5 cut(s) 16, 126, 710, 1210, 1273
AsuNHI GCTAGC 1 cut(s) 634
AvaI CYCGRG 1 cut(s) 912
AvaII GGWCC 2 cut(s) 752, 1222
BamHI GGATCC 1 cut(s) 102
BanII GRGCYC 3 cut(s) 256, 530, 1051
BbsI GAAGAC 2 cut(s) 151, 1374
Bbv12I GWGCWC 2 cut(s) 256, 530
BbvI GCAGC 1 cut(s) 920
BccI CCATC 9 cut(s) 46, 105, 119, 1225, 1294, 1333, 1360, 1364, 1418
BceAI ACGGC 2 cut(s) 296, 1271
BcgI CGANNNNNNTGC 2 cut(s) 568, 602
BciT130I CCWGG 2 cut(s) 594, 722
BclI TGATCA 1 cut(s) 832
BcnI CCSGG 2 cut(s) 555, 746
BcoDI GTCTC 5 cut(s) 86, 203, 319, 968, 1101
BfaI CTAG 2 cut(s) 459, 635
BfmI CTRYAG 1 cut(s) 934
BfoI RGCGCY 1 cut(s) 641
BfuAI ACCTGC 1 cut(s) 1233
BglII AGATCT 1 cut(s) 167
BisI GCNGC 6 cut(s) 590, 695, 893, 934, 964, 1350
BlsI GCNGC 6 cut(s) 591, 696, 894, 935, 965, 1351
Bme1390I CCNGG 4 cut(s) 555, 594, 722, 746
Bme18I GGWCC 2 cut(s) 752, 1222
BmeT110I CYCGRG 1 cut(s) 912
BmgT120I GGNCC 4 cut(s) 752, 1012, 1069, 1222
BmiI GGNNCC 4 cut(s) 104, 552, 1050, 1143
BmrFI CCNGG 4 cut(s) 555, 594, 722, 746
BmsI GCATC 5 cut(s) 330, 505, 518, 643, 1336
BmtI GCTAGC 1 cut(s) 638
BpiI GAAGAC 2 cut(s) 151, 1374
BpmI CTGGAG 2 cut(s) 301, 743
BpuEI CTTGAG 1 cut(s) 710
BpuMI CCSGG 2 cut(s) 555, 746
BsaAI YACGTR 3 cut(s) 450, 628, 1240
BsaBI GATNNNNATC 2 cut(s) 495, 807
BsaHI GRCGYC 2 cut(s) 309, 969
BsaJI CCNNGG 1 cut(s) 1027
BsaWI WCCGGW 2 cut(s) 487, 736
BsaXI ACNNNNNCTCC 4 cut(s) 299, 329, 1077, 1107
Bsc4I CCNNNNNNNGG 4 cut(s) 44, 554, 1033, 1231
Bse118I RCCGGY 2 cut(s) 365, 547
Bse1I ACTGG 1 cut(s) 32
Bse8I GATNNNNATC 2 cut(s) 495, 807
BseAI TCCGGA 1 cut(s) 487
BseBI CCWGG 2 cut(s) 594, 722
BseDI CCNNGG 1 cut(s) 1027
BseGI GGATG 4 cut(s) 38, 477, 1236, 1375
BseJI GATNNNNATC 2 cut(s) 495, 807
BseLI CCNNNNNNNGG 4 cut(s) 44, 554, 1033, 1231
BseMII CTCAG 3 cut(s) 360, 504, 775
BseNI ACTGG 1 cut(s) 32
BseRI GAGGAG 3 cut(s) 135, 219, 285
BseXI GCAGC 1 cut(s) 920
BseYI CCCAGC 1 cut(s) 183
Bsh1236I CGCG 2 cut(s) 329, 334
Bsh1285I CGRYCG 2 cut(s) 750, 805
BshFI GGCC 4 cut(s) 1014, 1026, 1070, 1159
BsiEI CGRYCG 2 cut(s) 750, 805
BsiHKAI GWGCWC 2 cut(s) 256, 530
BsiHKCI CYCGRG 1 cut(s) 912
BsiSI CCGG 9 cut(s) 366, 488, 531, 548, 554, 737, 746, 839, 998
BsiWI CGTACG 1 cut(s) 1288
BslI CCNNNNNNNGG 4 cut(s) 44, 554, 1033, 1231
BsmAI GTCTC 5 cut(s) 86, 203, 319, 968, 1101
BsmBI CGTCTC 4 cut(s) 86, 203, 319, 968
BsnI GGCC 4 cut(s) 1014, 1026, 1070, 1159
BsoBI CYCGRG 1 cut(s) 912
Bsp1286I GDGCHC 3 cut(s) 256, 530, 1051
Bsp13I TCCGGA 1 cut(s) 487
BspACI CCGC 7 cut(s) 590, 695, 893, 963, 1217, 1228, 1349
BspANI GGCC 4 cut(s) 1014, 1026, 1070, 1159
BspCNI CTCAG 3 cut(s) 359, 505, 774
BspEI TCCGGA 1 cut(s) 487
BspFNI CGCG 2 cut(s) 329, 334
BspLI GGNNCC 4 cut(s) 104, 552, 1050, 1143
BspMAI CTGCAG 1 cut(s) 938
BspMI ACCTGC 1 cut(s) 1233
BspOI GCTAGC 1 cut(s) 638
BspPI GGATC 6 cut(s) 97, 110, 218, 498, 816, 1384
BsrFI RCCGGY 2 cut(s) 365, 547
BsrI ACTGG 1 cut(s) 32
BssAI RCCGGY 2 cut(s) 365, 547
BssECI CCNNGG 1 cut(s) 1027
BssNI GRCGYC 2 cut(s) 309, 969
Bst2UI CCWGG 2 cut(s) 594, 722
Bst4CI ACNGT 2 cut(s) 1103, 1307
Bst6I CTCTTC 2 cut(s) 145, 1313
BstACI GRCGYC 2 cut(s) 309, 969
BstBAI YACGTR 3 cut(s) 450, 628, 1240
BstC8I GCNNGC 3 cut(s) 636, 1024, 1215
BstDEI CTNAG 3 cut(s) 346, 513, 761
BstF5I GGATG 4 cut(s) 38, 477, 1236, 1375
BstFNI CGCG 2 cut(s) 329, 334
BstH2I RGCGCY 1 cut(s) 641
BstHHI GCGC 1 cut(s) 640
BstMAI GTCTC 5 cut(s) 86, 203, 319, 968, 1101
BstMCI CGRYCG 2 cut(s) 750, 805
BstMWI GCNNNNNNNGC 7 cut(s) 260, 620, 694, 879, 1076, 1349, 1358
BstNI CCWGG 2 cut(s) 594, 722
BstSCI CCNGG 4 cut(s) 553, 592, 720, 744
BstSFI CTRYAG 1 cut(s) 934
BstSNI TACGTA 1 cut(s) 628
BstUI CGCG 2 cut(s) 329, 334
BstV1I GCAGC 1 cut(s) 920
BstV2I GAAGAC 2 cut(s) 151, 1374
BstX2I RGATCY 3 cut(s) 102, 167, 223
BstYI RGATCY 3 cut(s) 102, 167, 223
BsuRI GGCC 4 cut(s) 1014, 1026, 1070, 1159
BtgZI GCGATG 3 cut(s) 160, 549, 1390
BtsCI GGATG 4 cut(s) 38, 477, 1236, 1375
BtsIMutI CAGTG 1 cut(s) 1099
BveI ACCTGC 1 cut(s) 1233
Cac8I GCNNGC 3 cut(s) 636, 1024, 1215
CfoI GCGC 1 cut(s) 640
Cfr10I RCCGGY 2 cut(s) 365, 547
Cfr13I GGNCC 4 cut(s) 752, 1012, 1069, 1222
CpoI CGGWCCG 1 cut(s) 752
CseI GACGC 4 cut(s) 68, 317, 318, 323
Csp6I GTAC 2 cut(s) 1165, 1289
CspI CGGWCCG 1 cut(s) 752
CviAII CATG 1 cut(s) 1009
CviQI GTAC 2 cut(s) 1165, 1289
DdeI CTNAG 3 cut(s) 346, 513, 761
EaeI YGGCCR 1 cut(s) 1157
Eam1104I CTCTTC 2 cut(s) 145, 1313
EarI CTCTTC 2 cut(s) 145, 1313
Ecl136II GAGCTC 2 cut(s) 254, 528
Eco105I TACGTA 1 cut(s) 628
Eco24I GRGCYC 3 cut(s) 256, 530, 1051
Eco47I GGWCC 2 cut(s) 752, 1222
Eco53kI GAGCTC 2 cut(s) 254, 528
Eco88I CYCGRG 1 cut(s) 912
EcoICRI GAGCTC 2 cut(s) 254, 528
EcoRI GAATTC 1 cut(s) 68
EcoRII CCWGG 2 cut(s) 592, 720
EcoT38I GRGCYC 3 cut(s) 256, 530, 1051
Esp3I CGTCTC 4 cut(s) 86, 203, 319, 968
FaeI CATG 1 cut(s) 1012
FalI AAGNNNNNCTT 2 cut(s) 1345, 1377
FatI CATG 1 cut(s) 1008
FbaI TGATCA 1 cut(s) 832
Fnu4HI GCNGC 6 cut(s) 590, 695, 893, 934, 964, 1350
FokI GGATG 4 cut(s) 25, 484, 1243, 1382
FriOI GRGCYC 3 cut(s) 256, 530, 1051
Fsp4HI GCNGC 6 cut(s) 590, 695, 893, 934, 964, 1350
FspBI CTAG 2 cut(s) 459, 635
GlaI GCGC 1 cut(s) 639
GluI GCNGC 6 cut(s) 590, 695, 893, 934, 964, 1350
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 2 cut(s) 301, 743
HaeII RGCGCY 1 cut(s) 641
HaeIII GGCC 4 cut(s) 1014, 1026, 1070, 1159
HapII CCGG 9 cut(s) 366, 488, 531, 548, 554, 737, 746, 839, 998
HgaI GACGC 4 cut(s) 68, 317, 318, 323
HhaI GCGC 1 cut(s) 640
Hin1I GRCGYC 2 cut(s) 309, 969
Hin1II CATG 1 cut(s) 1012
Hin6I GCGC 1 cut(s) 638
HinP1I GCGC 1 cut(s) 638
HindIII AAGCTT 3 cut(s) 261, 612, 1126
HinfI GANTC 9 cut(s) 350, 558, 645, 757, 781, 842, 979, 1246, 1401
HpaII CCGG 9 cut(s) 366, 488, 531, 548, 554, 737, 746, 839, 998
HphI GGTGA 5 cut(s) 16, 126, 710, 1210, 1273
Hpy166II GTNNAC 2 cut(s) 742, 1222
Hpy188I TCNGA 9 cut(s) 102, 300, 349, 501, 514, 576, 752, 786, 813
Hpy188III TCNNGA 8 cut(s) 92, 257, 283, 377, 488, 806, 868, 973
Hpy8I GTNNAC 2 cut(s) 742, 1222
Hpy99I CGWCG 8 cut(s) 329, 334, 339, 580, 932, 971, 974, 1435
HpyAV CCTTC 7 cut(s) 218, 441, 652, 688, 895, 1198, 1351
HpyCH4III ACNGT 2 cut(s) 1103, 1307
HpyCH4IV ACGT 5 cut(s) 449, 627, 969, 1154, 1239
HpyCH4V TGCA 2 cut(s) 390, 936
HpyF10VI GCNNNNNNNGC 7 cut(s) 260, 620, 694, 879, 1076, 1349, 1358
HpyF3I CTNAG 3 cut(s) 346, 513, 761
HpySE526I ACGT 5 cut(s) 449, 627, 969, 1154, 1239
Hsp92I GRCGYC 2 cut(s) 309, 969
Hsp92II CATG 1 cut(s) 1012
HspAI GCGC 1 cut(s) 638
Kpn2I TCCGGA 1 cut(s) 487
Ksp22I TGATCA 1 cut(s) 832
LmnI GCTCC 5 cut(s) 259, 533, 685, 870, 1054
Lsp1109I GCAGC 1 cut(s) 920
LweI GCATC 5 cut(s) 330, 505, 518, 643, 1336
MaeI CTAG 2 cut(s) 459, 635
MaeII ACGT 5 cut(s) 449, 627, 969, 1154, 1239
MaeIII GTNAC 2 cut(s) 452, 1261
MboII GAAGA 9 cut(s) 16, 132, 151, 419, 551, 803, 1330, 1374, 1433
MflI RGATCY 3 cut(s) 102, 167, 223
MhlI GDGCHC 3 cut(s) 256, 530, 1051
MluCI AATT 8 cut(s) 68, 391, 542, 581, 673, 728, 951, 1412
MlyI GAGTC 3 cut(s) 790, 851, 1255
MmeI TCCRAC 3 cut(s) 599, 730, 1088
MroI TCCGGA 1 cut(s) 487
MseI TTAA 4 cut(s) 423, 672, 1182, 1332
MslI CAYNNNNRTG 1 cut(s) 1196
MspI CCGG 9 cut(s) 366, 488, 531, 548, 554, 737, 746, 839, 998
MspR9I CCNGG 4 cut(s) 555, 594, 722, 746
MvaI CCWGG 2 cut(s) 594, 722
MvnI CGCG 2 cut(s) 329, 334
MwoI GCNNNNNNNGC 7 cut(s) 260, 620, 694, 879, 1076, 1349, 1358
NciI CCSGG 2 cut(s) 555, 746
NheI GCTAGC 1 cut(s) 634
NlaIII CATG 1 cut(s) 1012
NlaIV GGNNCC 4 cut(s) 104, 552, 1050, 1143
NmeAIII GCCGAG 3 cut(s) 666, 1040, 1052
NmuCI GTSAC 1 cut(s) 1261
OliI CACNNNNGTG 1 cut(s) 1196
PaeR7I CTCGAG 1 cut(s) 912
PcsI WCGNNNNNNNCGW 1 cut(s) 624
PfeI GAWTC 6 cut(s) 350, 558, 645, 757, 979, 1401
Pfl23II CGTACG 1 cut(s) 1288
PflFI GACNNNGTC 1 cut(s) 311
PfoI TCCNGGA 1 cut(s) 553
PkrI GCNGC 6 cut(s) 591, 696, 894, 935, 965, 1351
Ple19I CGATCG 1 cut(s) 805
PleI GAGTC 3 cut(s) 789, 850, 1254
PpsI GAGTC 3 cut(s) 789, 850, 1254
Ppu21I YACGTR 3 cut(s) 450, 628, 1240
Psp124BI GAGCTC 2 cut(s) 256, 530
Psp6I CCWGG 2 cut(s) 592, 720
PspFI CCCAGC 1 cut(s) 183
PspGI CCWGG 2 cut(s) 592, 720
PspLI CGTACG 1 cut(s) 1288
PspN4I GGNNCC 4 cut(s) 104, 552, 1050, 1143
PspPI GGNCC 4 cut(s) 752, 1012, 1069, 1222
PspXI VCTCGAGB 1 cut(s) 912
PstI CTGCAG 1 cut(s) 938
PsuI RGATCY 3 cut(s) 102, 167, 223
PsyI GACNNNGTC 1 cut(s) 311
PvuI CGATCG 1 cut(s) 805
RsaI GTAC 2 cut(s) 1166, 1290
RsaNI GTAC 2 cut(s) 1165, 1289
RseI CAYNNNNRTG 1 cut(s) 1196
Rsr2I CGGWCCG 1 cut(s) 752
RsrII CGGWCCG 1 cut(s) 752
SacI GAGCTC 2 cut(s) 256, 530
SaqAI TTAA 4 cut(s) 423, 672, 1182, 1332
SatI GCNGC 6 cut(s) 590, 695, 893, 934, 964, 1350
Sau96I GGNCC 4 cut(s) 752, 1012, 1069, 1222
SchI GAGTC 3 cut(s) 790, 851, 1255
ScrFI CCNGG 4 cut(s) 555, 594, 722, 746
SduI GDGCHC 3 cut(s) 256, 530, 1051
SfaNI GCATC 5 cut(s) 330, 505, 518, 643, 1336
SfcI CTRYAG 1 cut(s) 934
Sfr274I CTCGAG 1 cut(s) 912
SinI GGWCC 2 cut(s) 752, 1222
SlaI CTCGAG 1 cut(s) 912
SmiMI CAYNNNNRTG 1 cut(s) 1196
SmlI CTYRAG 2 cut(s) 689, 912
SmoI CTYRAG 2 cut(s) 689, 912
SnaBI TACGTA 1 cut(s) 628
Sse9I AATT 8 cut(s) 68, 391, 542, 581, 673, 728, 951, 1412
SsiI CCGC 7 cut(s) 590, 695, 893, 963, 1217, 1228, 1349
SspMI CTAG 2 cut(s) 459, 635
SstI GAGCTC 2 cut(s) 256, 530
StyD4I CCNGG 4 cut(s) 553, 592, 720, 744
TaaI ACNGT 2 cut(s) 1103, 1307
TaiI ACGT 5 cut(s) 452, 630, 972, 1157, 1242
TaqII GACCGA 1 cut(s) 769
TasI AATT 8 cut(s) 68, 391, 542, 581, 673, 728, 951, 1412
TauI GCSGC 5 cut(s) 592, 697, 895, 966, 1352
TfiI GAWTC 6 cut(s) 350, 558, 645, 757, 979, 1401
Tru1I TTAA 4 cut(s) 423, 672, 1182, 1332
Tru9I TTAA 4 cut(s) 423, 672, 1182, 1332
TscAI CASTG 1 cut(s) 1106
TseFI GTSAC 1 cut(s) 1261
TseI GCWGC 1 cut(s) 933
Tsp45I GTSAC 1 cut(s) 1261
TspDTI ATGAA 7 cut(s) 16, 384, 491, 550, 552, 997, 1393
TspGWI ACGGA 3 cut(s) 145, 185, 698
TspRI CASTG 1 cut(s) 1106
Tth111I GACNNNGTC 1 cut(s) 311
VpaK11BI GGWCC 2 cut(s) 752, 1222
XapI RAATTY 3 cut(s) 68, 581, 728
XhoI CTCGAG 1 cut(s) 912
XspI CTAG 2 cut(s) 459, 635
ZraI GACGTC 1 cut(s) 970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.