Rw2G043210

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
69589858 .. 69591300
1443 bp
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UTR
Exon/CDS
Intron
Rw2G043210.1

Sequence Viewer

Length: 1365 bp
ATGAAGAGAGCAGAACTAGTGTTCATCCCAGCACCAGGGGCCGGCCACCTCATAGCAGCCTTGCAATTCGGAAAGCTTCTTGCCATCAAATCAGCAGCCCCTTCATCTTTAGGTTCATACACAGAATCCCTTGTTGCTTCGGAATCCCGAATCCAACTCATTGATGTCCCTCAAGCAGAGCTGCCTCCATTAGAGTTTGCAAAGTCACCAGCTAAATTTTTCATTCTAAACATTGAGAACCATGTGCCTAATGTCAGGGAGGCCCTCACTAACTACGTTTCATCATCACATTCTAAGCCCGACTCGGTTCCAATTGTTGGAGTGGTTCTTGATTTCTTCTGTGTCTCCATGATTGATGTGGCCAATGAACTCAATCTCCCTTCTTATCTTTTCATGACGAGCAATGCAGGGTATCTTTCTCTCATGTTCCACTTTCCGGCGCAGGATAGCCGGACCAGTATTGTCCCCCCAGTTCCTACTACAGTTTTGCCTGTGTCTATGACAGATGGTAGCTACTCTAGTTATCTTGGGATTGCTGCGAGATTTAGAGAGGCCAAAGGTATCATAGCAAATACTTGTGTTGAGTTAGAGGCACATGCTTTTAACTCGTTTTCAAAAGATCAAACTACGCCTCCGGTGTACCCAGTTGGGCCGGTGCTTGATCTCAACGATGGTCAGGCTCGGTCCAATTTAAACCATGCGCAGCGTGACAGGATCATGAGCTGGCTTGATGATCAGCCTGAAGAATCTGTTGTGTTCTTATGCTTTGGAAGCTTGGGGAGCTTTAGTGAAGCACAAGTGAAGGAGATAGCTCTGGGGCTTGAGCAGAGTGGGCAGAGGTTCTTGTGGTCTTTGCGTTTGACACCACCAAAAGACAGCAAAACTCTGACTCCTATCGACTGCTCGAATCTTGAGGAAGTCTTGCCGGATGGGTTCTTGGAGAGGACTAGAGGAAAGGGACTGATATGCGGGTGGGCGCCGCAGGTGGAAGTCTTGTCCCACAAGGCAACCGGAGGCTTTGTGTCGCATTGTGGGTGGAACTCGATCTTGGAGAGCTTGTGGTATGGTGTGCCTATTGTGACATGGCCTATGTATGCCGAGCAACAGCTGAATGCTTTTCGAATGGTGAAGGAGTTGGGGTTGGGATTGGAGATGAGGTTGGATTACAAGAAAGGTGGTGAGGTTGTGAAGGCAGATGAGATAGGGAAGGCAGTGGTTAGTGTAATGGAGGACAGCGAGGTGAGGAAGAAGGTTAAAGAGATGGGGGTGGTGAGCAGAAAAGCTGTAGAGGACGGTGGGTCTTCCTCCGTTTCTCTTGGACGGTTTATTGAAGATGTGATGAGGAATCATTTTGGTTCTGATTAA

Protein Analysis

454

Amino Acids

49.66

Weight (kDa)

5.42

Isoelectric Point (pI)

42.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 244 - 380 2e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 973
Acc16I TGCGCA 1 cut(s) 702
Acc36I ACCTGC 1 cut(s) 973
AccB1I GGYRCC 1 cut(s) 976
AccB7I CCANNNNNTGG 1 cut(s) 317
AciI CCGC 2 cut(s) 969, 980
AclWI GGATC 1 cut(s) 722
AcoI YGGCCR 2 cut(s) 43, 360
AcsI RAATTY 1 cut(s) 215
AcuI CTGAAG 1 cut(s) 762
AcyI GRCGYC 1 cut(s) 977
AfaI GTAC 1 cut(s) 641
AfiI CCNNNNNNNGG 4 cut(s) 35, 41, 317, 436
AgsI TTSAA 2 cut(s) 615, 1331
AhdI GACNNNNNGTC 1 cut(s) 1297
AhlI ACTAGT 1 cut(s) 16
AjnI CCWGG 1 cut(s) 34
AjuI GAANNNNNNNTTGG 2 cut(s) 1031, 1063
AloI GAACNNNNNNTCC 2 cut(s) 360, 392
Alw26I GTCTC 1 cut(s) 349
AlwI GGATC 1 cut(s) 722
AoxI GGCC 7 cut(s) 39, 43, 261, 360, 552, 650, 1085
ApeKI GCWGC 5 cut(s) 56, 95, 181, 536, 703
ApoI RAATTY 1 cut(s) 215
AspLEI GCGC 3 cut(s) 442, 703, 979
AspS9I GGNCC 5 cut(s) 39, 262, 453, 650, 684
AsuHPI GGTGA 5 cut(s) 198, 1138, 1190, 1252, 1282
AsuII TTCGAA 1 cut(s) 1120
AvaII GGWCC 2 cut(s) 453, 684
BalI TGGCCA 1 cut(s) 362
BanI GGYRCC 1 cut(s) 976
BbsI GAAGAC 1 cut(s) 1293
BbvI GCAGC 5 cut(s) 68, 107, 168, 523, 715
BccI CCATC 5 cut(s) 92, 500, 665, 923, 1255
BciT130I CCWGG 1 cut(s) 36
BclI TGATCA 1 cut(s) 733
BcoDI GTCTC 1 cut(s) 349
BcuI ACTAGT 1 cut(s) 16
BfaI CTAG 3 cut(s) 17, 519, 948
BfmI CTRYAG 2 cut(s) 480, 1284
BfoI RGCGCY 1 cut(s) 980
BfuAI ACCTGC 1 cut(s) 973
BisI GCNGC 6 cut(s) 57, 96, 182, 537, 704, 980
BlsI GCNGC 6 cut(s) 58, 97, 183, 538, 705, 981
Bme1390I CCNGG 1 cut(s) 36
Bme18I GGWCC 2 cut(s) 453, 684
BmeRI GACNNNNNGTC 1 cut(s) 1297
BmgT120I GGNCC 5 cut(s) 39, 262, 453, 650, 684
BmiI GGNNCC 3 cut(s) 40, 309, 978
BmrFI CCNGG 1 cut(s) 36
BmrI ACTGGG 2 cut(s) 464, 638
BmuI ACTGGG 2 cut(s) 464, 638
BpiI GAAGAC 1 cut(s) 1293
Bpu14I TTCGAA 1 cut(s) 1120
BpuEI CTTGAG 3 cut(s) 156, 842, 932
BsaHI GRCGYC 1 cut(s) 977
BsaJI CCNNGG 1 cut(s) 35
BsaWI WCCGGW 2 cut(s) 634, 1010
Bsc4I CCNNNNNNNGG 4 cut(s) 35, 41, 317, 436
Bse118I RCCGGY 2 cut(s) 41, 652
Bse1I ACTGG 3 cut(s) 456, 470, 644
Bse3DI GCAATG 1 cut(s) 409
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 1 cut(s) 35
BseGI GGATG 2 cut(s) 24, 934
BseLI CCNNNNNNNGG 4 cut(s) 35, 41, 317, 436
BseMI GCAATG 1 cut(s) 409
BseNI ACTGG 3 cut(s) 456, 470, 644
BseXI GCAGC 5 cut(s) 68, 107, 168, 523, 715
BseYI CCCAGC 1 cut(s) 28
BshFI GGCC 7 cut(s) 41, 45, 263, 362, 554, 652, 1087
BshNI GGYRCC 1 cut(s) 976
BsiSI CCGG 7 cut(s) 42, 437, 451, 635, 653, 926, 1011
BslFI GGGAC 4 cut(s) 152, 449, 972, 982
BslI CCNNNNNNNGG 4 cut(s) 35, 41, 317, 436
BsmAI GTCTC 1 cut(s) 349
BsmFI GGGAC 4 cut(s) 152, 449, 972, 982
BsmI GAATGC 1 cut(s) 1117
BsnI GGCC 7 cut(s) 41, 45, 263, 362, 554, 652, 1087
Bsp119I TTCGAA 1 cut(s) 1120
Bsp143I GATC 5 cut(s) 619, 661, 714, 733, 1044
BspACI CCGC 2 cut(s) 969, 980
BspANI GGCC 7 cut(s) 41, 45, 263, 362, 554, 652, 1087
BspHI TCATGA 2 cut(s) 393, 717
BspLI GGNNCC 3 cut(s) 40, 309, 978
BspMI ACCTGC 1 cut(s) 973
BspPI GGATC 1 cut(s) 722
BspT104I TTCGAA 1 cut(s) 1120
BspT107I GGYRCC 1 cut(s) 976
BsrDI GCAATG 1 cut(s) 409
BsrFI RCCGGY 2 cut(s) 41, 652
BsrI ACTGG 3 cut(s) 456, 470, 644
BssAI RCCGGY 2 cut(s) 41, 652
BssECI CCNNGG 1 cut(s) 35
BssMI GATC 5 cut(s) 619, 661, 714, 733, 1044
BssNI GRCGYC 1 cut(s) 977
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 3 cut(s) 484, 1295, 1323
BstACI GRCGYC 1 cut(s) 977
BstBI TTCGAA 1 cut(s) 1120
BstC8I GCNNGC 2 cut(s) 43, 725
BstDEI CTNAG 1 cut(s) 294
BstF5I GGATG 2 cut(s) 24, 934
BstH2I RGCGCY 1 cut(s) 980
BstHHI GCGC 3 cut(s) 442, 703, 979
BstKTI GATC 5 cut(s) 622, 664, 717, 736, 1047
BstMAI GTCTC 1 cut(s) 349
BstMBI GATC 5 cut(s) 619, 661, 714, 733, 1044
BstMWI GCNNNNNNNGC 4 cut(s) 38, 771, 780, 832
BstNI CCWGG 1 cut(s) 36
BstNSI RCATGY 1 cut(s) 599
BstSCI CCNGG 1 cut(s) 34
BstSFI CTRYAG 2 cut(s) 480, 1284
BstV1I GCAGC 5 cut(s) 68, 107, 168, 523, 715
BstV2I GAAGAC 1 cut(s) 1293
BsuRI GGCC 7 cut(s) 41, 45, 263, 362, 554, 652, 1087
BtsCI GGATG 2 cut(s) 24, 934
BtsI GCAGTG 1 cut(s) 1218
BtsIMutI CAGTG 1 cut(s) 1218
BveI ACCTGC 1 cut(s) 973
Cac8I GCNNGC 2 cut(s) 43, 725
CciI TCATGA 2 cut(s) 393, 717
CfoI GCGC 3 cut(s) 442, 703, 979
Cfr10I RCCGGY 2 cut(s) 41, 652
Cfr13I GGNCC 5 cut(s) 39, 262, 453, 650, 684
Csp6I GTAC 1 cut(s) 640
CspCI CAANNNNNGTGG 2 cut(s) 1156, 1191
CviAII CATG 8 cut(s) 242, 349, 394, 424, 596, 698, 718, 1083
CviQI GTAC 1 cut(s) 640
DdeI CTNAG 1 cut(s) 294
DinI GGCGCC 1 cut(s) 978
DpnI GATC 5 cut(s) 621, 663, 716, 735, 1046
DpnII GATC 5 cut(s) 619, 661, 714, 733, 1044
DraI TTTAAA 1 cut(s) 693
DriI GACNNNNNGTC 1 cut(s) 1297
EaeI YGGCCR 2 cut(s) 43, 360
Eam1105I GACNNNNNGTC 1 cut(s) 1297
Eco47I GGWCC 2 cut(s) 453, 684
Eco57I CTGAAG 1 cut(s) 762
EcoO109I RGGNCCY 1 cut(s) 262
EcoRII CCWGG 1 cut(s) 34
EgeI GGCGCC 1 cut(s) 978
EheI GGCGCC 1 cut(s) 978
FaeI CATG 8 cut(s) 245, 352, 397, 427, 599, 701, 721, 1086
FaqI GGGAC 4 cut(s) 152, 449, 972, 982
FatI CATG 8 cut(s) 241, 348, 393, 423, 595, 697, 717, 1082
FauI CCCGC 1 cut(s) 962
FbaI TGATCA 1 cut(s) 733
Fnu4HI GCNGC 6 cut(s) 57, 96, 182, 537, 704, 980
FokI GGATG 2 cut(s) 11, 941
FseI GGCCGGCC 1 cut(s) 45
Fsp4HI GCNGC 6 cut(s) 57, 96, 182, 537, 704, 980
FspBI CTAG 3 cut(s) 17, 519, 948
FspI TGCGCA 1 cut(s) 702
GlaI GCGC 3 cut(s) 441, 702, 978
GluI GCNGC 6 cut(s) 57, 96, 182, 537, 704, 980
GsaI CCCAGC 1 cut(s) 32
HaeII RGCGCY 1 cut(s) 980
HaeIII GGCC 7 cut(s) 41, 45, 263, 362, 554, 652, 1087
HapII CCGG 7 cut(s) 42, 437, 451, 635, 653, 926, 1011
HhaI GCGC 3 cut(s) 442, 703, 979
Hin1I GRCGYC 1 cut(s) 977
Hin1II CATG 8 cut(s) 245, 352, 397, 427, 599, 701, 721, 1086
Hin6I GCGC 3 cut(s) 440, 701, 977
HinP1I GCGC 3 cut(s) 440, 701, 977
HindIII AAGCTT 2 cut(s) 74, 772
HinfI GANTC 8 cut(s) 125, 143, 150, 302, 746, 889, 907, 1345
HpaII CCGG 7 cut(s) 42, 437, 451, 635, 653, 926, 1011
HphI GGTGA 5 cut(s) 198, 1138, 1190, 1252, 1282
Hpy166II GTNNAC 1 cut(s) 640
Hpy188I TCNGA 4 cut(s) 71, 142, 888, 1360
Hpy188III TCNNGA 5 cut(s) 147, 329, 394, 718, 911
Hpy8I GTNNAC 1 cut(s) 640
HpyAV CCTTC 7 cut(s) 111, 390, 796, 1123, 1183, 1201, 1243
HpyCH4III ACNGT 3 cut(s) 484, 1295, 1323
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 3 cut(s) 64, 200, 407
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 771, 780, 832
HpyF3I CTNAG 1 cut(s) 294
HpySE526I ACGT 1 cut(s) 276
Hsp92I GRCGYC 1 cut(s) 977
Hsp92II CATG 8 cut(s) 245, 352, 397, 427, 599, 701, 721, 1086
HspAI GCGC 3 cut(s) 440, 701, 977
KasI GGCGCC 1 cut(s) 976
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 733
Kzo9I GATC 5 cut(s) 619, 661, 714, 733, 1044
LmnI GCTCC 1 cut(s) 780
Lsp1109I GCAGC 5 cut(s) 68, 107, 168, 523, 715
MaeI CTAG 3 cut(s) 17, 519, 948
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 3 cut(s) 204, 707, 1078
MalI GATC 5 cut(s) 621, 663, 716, 735, 1046
MboI GATC 5 cut(s) 619, 661, 714, 733, 1044
MboII GAAGA 6 cut(s) 16, 328, 755, 1258, 1293, 1343
MfeI CAATTG 1 cut(s) 312
MlsI TGGCCA 1 cut(s) 362
MluCI AATT 4 cut(s) 65, 215, 312, 688
MluNI TGGCCA 1 cut(s) 362
Mly113I GGCGCC 1 cut(s) 977
MlyI GAGTC 2 cut(s) 296, 883
MmeI TCCRAC 3 cut(s) 178, 298, 1140
Mox20I TGGCCA 1 cut(s) 362
MroNI GCCGGC 1 cut(s) 41
MscI TGGCCA 1 cut(s) 362
MseI TTAA 4 cut(s) 603, 692, 1254, 1363
Msp20I TGGCCA 1 cut(s) 362
MspA1I CMGCKG 1 cut(s) 1108
MspI CCGG 7 cut(s) 42, 437, 451, 635, 653, 926, 1011
MspR9I CCNGG 1 cut(s) 36
MunI CAATTG 1 cut(s) 312
Mva1269I GAATGC 1 cut(s) 1117
MvaI CCWGG 1 cut(s) 36
MwoI GCNNNNNNNGC 4 cut(s) 38, 771, 780, 832
NaeI GCCGGC 1 cut(s) 43
NarI GGCGCC 1 cut(s) 977
NdeII GATC 5 cut(s) 619, 661, 714, 733, 1044
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 8 cut(s) 245, 352, 397, 427, 599, 701, 721, 1086
NlaIV GGNNCC 3 cut(s) 40, 309, 978
NmeAIII GCCGAG 1 cut(s) 1123
NmuCI GTSAC 3 cut(s) 204, 707, 1078
NsbI TGCGCA 1 cut(s) 702
NspI RCATGY 1 cut(s) 599
NspV TTCGAA 1 cut(s) 1120
PagI TCATGA 2 cut(s) 393, 717
PaqCI CACCTGC 1 cut(s) 973
PctI GAATGC 1 cut(s) 1117
PdiI GCCGGC 1 cut(s) 43
PfeI GAWTC 6 cut(s) 125, 143, 150, 746, 907, 1345
PflMI CCANNNNNTGG 1 cut(s) 317
PkrI GCNGC 6 cut(s) 58, 97, 183, 538, 705, 981
PleI GAGTC 2 cut(s) 296, 883
PluTI GGCGCC 1 cut(s) 980
PpsI GAGTC 2 cut(s) 296, 883
Psp6I CCWGG 1 cut(s) 34
PspFI CCCAGC 1 cut(s) 28
PspGI CCWGG 1 cut(s) 34
PspN4I GGNNCC 3 cut(s) 40, 309, 978
PspPI GGNCC 5 cut(s) 39, 262, 453, 650, 684
PvuII CAGCTG 1 cut(s) 1108
RigI GGCCGGCC 1 cut(s) 45
RsaI GTAC 1 cut(s) 641
RsaNI GTAC 1 cut(s) 640
SaqAI TTAA 4 cut(s) 603, 692, 1254, 1363
SatI GCNGC 6 cut(s) 57, 96, 182, 537, 704, 980
Sau3AI GATC 5 cut(s) 619, 661, 714, 733, 1044
Sau96I GGNCC 5 cut(s) 39, 262, 453, 650, 684
SchI GAGTC 2 cut(s) 296, 883
ScrFI CCNGG 1 cut(s) 36
SfcI CTRYAG 2 cut(s) 480, 1284
SfoI GGCGCC 1 cut(s) 978
SfuI TTCGAA 1 cut(s) 1120
SinI GGWCC 2 cut(s) 453, 684
SmlI CTYRAG 3 cut(s) 171, 821, 911
SmoI CTYRAG 3 cut(s) 171, 821, 911
SpeI ACTAGT 1 cut(s) 16
Sse9I AATT 4 cut(s) 65, 215, 312, 688
SsiI CCGC 2 cut(s) 969, 980
SspDI GGCGCC 1 cut(s) 976
SspMI CTAG 3 cut(s) 17, 519, 948
StyD4I CCNGG 1 cut(s) 34
TaaI ACNGT 3 cut(s) 484, 1295, 1323
TaiI ACGT 1 cut(s) 279
TaqI TCGA 4 cut(s) 897, 905, 1043, 1120
TaqII GACCGA 1 cut(s) 672
TasI AATT 4 cut(s) 65, 215, 312, 688
TauI GCSGC 1 cut(s) 982
TfiI GAWTC 6 cut(s) 125, 143, 150, 746, 907, 1345
Tru1I TTAA 4 cut(s) 603, 692, 1254, 1363
Tru9I TTAA 4 cut(s) 603, 692, 1254, 1363
TscAI CASTG 1 cut(s) 1218
TseFI GTSAC 3 cut(s) 204, 707, 1078
TseI GCWGC 5 cut(s) 56, 95, 181, 536, 703
Tsp45I GTSAC 3 cut(s) 204, 707, 1078
TspDTI ATGAA 8 cut(s) 13, 17, 93, 105, 211, 270, 381, 382
TspGWI ACGGA 1 cut(s) 1297
TspRI CASTG 1 cut(s) 1218
Van91I CCANNNNNTGG 1 cut(s) 317
VpaK11BI GGWCC 2 cut(s) 453, 684
XapI RAATTY 1 cut(s) 215
XceI RCATGY 1 cut(s) 599
XcmI CCANNNNNNNNNTGG 1 cut(s) 355
XspI CTAG 3 cut(s) 17, 519, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.