AT1G08510

Plays an essential role in chain termination during de novo fatty acid synthesis

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
2691062 .. 2694547
3486 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08510.1

Sequence Viewer

Length: 1239 bp
ATGGTGGCCACCTCTGCTACGTCGTCATTCTTTCCTGTACCATCTTCTTCACTTGATCCTAATGGAAAAGGCAATAAGATTGGGTCTACGAATCTTGCTGGACTCAATTCTGCACCTAACTCTGGTAGGATGAAGGTTAAACCAAACGCTCAGGCTCCACCTAAGATTAATGGGAAAAAGGTTGGTTTGCCTGGTTCTGTAGATATTGTAAGGACTGATACCGAGACCTCATCACACCCTGCGCCGAGAACTTTCATCAACCAGTTACCTGACTGGAGCATGCTTCTTGCTGCTATAACTACGATTTTCTTAGCGGCTGAGAAACAGTGGATGATGCTTGATTGGAAACCTAGGCGTTCTGACATGCTGGTGGATCCTTTTGGTATAGGGAGAATTGTTCAGGATGGCCTTGTGTTCCGTCAGAATTTTTCTATTAGGTCATATGAAATAGGTGCTGATCGCTCTGCATCTATAGAAACCGTCATGAATCATCTGCAGGAAACGGCGCTTAATCATGTTAAGACTGCTGGATTGCTTGGAGATGGGTTTGGCTCTACACCTGAGATGTTTAAGAAGAACTTGATATGGGTTGTCACTCGTATGCAGGTTGTGGTTGATAAATATCCTACTTGGGGAGATGTTGTTGAAGTAGACACCTGGGTCAGTCAGTCTGGAAAGAATGGTATGCGTCGTGATTGGCTAGTTCGGGACTGTAATACTGGAGAAACCTTAACACGAGCATCAAGTGTGTGGGTGATGATGAATAAACTGACAAGGAGATTGTCAAAGATTCCTGAAGAGGTTCGAGGGGAAATAGAGCCTTATTTTGTGAATTCTGATCCTGTCCTTGCCGAGGACAGCAGAAAGTTAACAAAAATTGATGACAAGACTGCTGACTATGTTCGATCTGGTCTCACTCCTCGATGGAGTGACCTAGATGTTAACCAGCATGTGAATAATGTAAAGTACATTGGGTGGATCCTGGAGAGTGCTCCAGTGGGAATAATGGAGAGGCAGAAGCTGAAAAGCATGACTCTGGAGTATCGGAGGGAATGCGGGAGAGACAGTGTGCTTCAGTCCCTCACTGCAGTTACGGGTTGCGATATCGGTAACCTGGCAACAGCGGGGGATGTGGAATGTCAGCATTTGCTCCGACTCCAGGATGGAGCGGAAGTGGTGAGAGGAAGAACAGAGTGGAGTAGTAAAACACCAACAACAACTTGGGGAACTGCACCGTAA

Protein Analysis

412

Amino Acids

45.69

Weight (kDa)

8.76

Isoelectric Point (pI)

35.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl-thio_N PF12590 1 - 125 7.9e-58 Acyl-ATP thioesterase
Acyl-ACP_TE PF01643 136 - 271 1.6e-40 Acyl-ACP thioesterase N-terminal domain
Acyl-ACP_TE_C PF20791 297 - 400 4.6e-27 Acyl-ACP thioesterase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 659
Acc36I ACCTGC 1 cut(s) 595
AccBSI CCGCTC 1 cut(s) 1169
AccI GTMKAC 2 cut(s) 86, 651
AciI CCGC 4 cut(s) 314, 1056, 1124, 1169
AclWI GGATC 6 cut(s) 50, 368, 381, 833, 973, 986
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 2 cut(s) 424, 832
AcuI CTGAAG 2 cut(s) 816, 1058
AfaI GTAC 2 cut(s) 39, 968
AfiI CCNNNNNNNGG 4 cut(s) 122, 632, 853, 1159
AgsI TTSAA 1 cut(s) 647
AjnI CCWGG 5 cut(s) 190, 656, 981, 1113, 1158
AluBI AGCT 1 cut(s) 1021
AluI AGCT 1 cut(s) 1021
Alw21I GWGCWC 1 cut(s) 994
Alw26I GTCTC 3 cut(s) 218, 917, 1056
AlwI GGATC 6 cut(s) 50, 368, 381, 833, 973, 986
AlwNI CAGNNNCTG 1 cut(s) 1021
AoxI GGCC 2 cut(s) 6, 406
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 2 cut(s) 424, 832
AseI ATTAAT 1 cut(s) 168
Asp700I GAANNNNTTC 1 cut(s) 801
AspA2I CCTAGG 1 cut(s) 350
AspLEI GCGC 2 cut(s) 244, 508
AsuHPI GGTGA 2 cut(s) 766, 1189
AvrII CCTAGG 1 cut(s) 350
BalI TGGCCA 1 cut(s) 8
BamHI GGATCC 2 cut(s) 373, 978
BauI CACGAG 1 cut(s) 735
Bbv12I GWGCWC 1 cut(s) 994
BbvI GCAGC 1 cut(s) 277
BccI CCATC 5 cut(s) 49, 398, 536, 918, 1157
BceAI ACGGC 1 cut(s) 519
BciT130I CCWGG 5 cut(s) 192, 658, 983, 1115, 1160
BcoDI GTCTC 3 cut(s) 218, 917, 1056
BfaI CTAG 3 cut(s) 351, 701, 935
BfmI CTRYAG 4 cut(s) 198, 471, 494, 1086
BfoI RGCGCY 1 cut(s) 509
BfuAI ACCTGC 1 cut(s) 595
BisI GCNGC 2 cut(s) 291, 315
BlnI CCTAGG 1 cut(s) 350
BlsI GCNGC 2 cut(s) 292, 316
Bme1390I CCNGG 5 cut(s) 192, 658, 983, 1115, 1160
BmiI GGNNCC 3 cut(s) 156, 375, 980
BmrFI CCNGG 5 cut(s) 192, 658, 983, 1115, 1160
BmsI GCATC 3 cut(s) 324, 476, 749
BpmI CTGGAG 6 cut(s) 295, 741, 978, 1004, 1058, 1142
Bpu10I CCTNAGC 1 cut(s) 150
BsaBI GATNNNNATC 1 cut(s) 621
BsaI GGTCTC 2 cut(s) 218, 917
BsaJI CCNNGG 3 cut(s) 350, 657, 852
BsaXI ACNNNNNCTCC 6 cut(s) 627, 657, 1051, 1081, 1158, 1188
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 632, 853, 1159
Bse1I ACTGG 4 cut(s) 262, 278, 724, 995
Bse8I GATNNNNATC 1 cut(s) 621
BseBI CCWGG 5 cut(s) 192, 658, 983, 1115, 1160
BseDI CCNNGG 3 cut(s) 350, 657, 852
BseGI GGATG 5 cut(s) 135, 336, 409, 1135, 1168
BseJI GATNNNNATC 1 cut(s) 621
BseLI CCNNNNNNNGG 4 cut(s) 122, 632, 853, 1159
BseMII CTCAG 3 cut(s) 164, 309, 552
BseNI ACTGG 4 cut(s) 262, 278, 724, 995
BseRI GAGGAG 1 cut(s) 909
BseXI GCAGC 1 cut(s) 277
BsgI GTGCAG 2 cut(s) 96, 1215
BshFI GGCC 2 cut(s) 8, 408
BsiHKAI GWGCWC 1 cut(s) 994
BslFI GGGAC 2 cut(s) 722, 1063
BslI CCNNNNNNNGG 4 cut(s) 122, 632, 853, 1159
BsmAI GTCTC 3 cut(s) 218, 917, 1056
BsmFI GGGAC 2 cut(s) 722, 1063
BsmI GAATGC 1 cut(s) 1058
BsnI GGCC 2 cut(s) 8, 408
Bso31I GGTCTC 2 cut(s) 218, 917
Bsp1286I GDGCHC 1 cut(s) 994
Bsp143I GATC 6 cut(s) 55, 373, 457, 838, 905, 978
BspACI CCGC 4 cut(s) 314, 1056, 1124, 1169
BspANI GGCC 2 cut(s) 8, 408
BspCNI CTCAG 3 cut(s) 163, 310, 553
BspHI TCATGA 1 cut(s) 483
BspLI GGNNCC 3 cut(s) 156, 375, 980
BspMAI CTGCAG 2 cut(s) 498, 1090
BspMI ACCTGC 1 cut(s) 595
BspPI GGATC 6 cut(s) 50, 368, 381, 833, 973, 986
BspTNI GGTCTC 2 cut(s) 218, 917
BsrBI CCGCTC 1 cut(s) 1169
BsrI ACTGG 4 cut(s) 262, 278, 724, 995
BssECI CCNNGG 3 cut(s) 350, 657, 852
BssMI GATC 6 cut(s) 55, 373, 457, 838, 905, 978
BssSI CACGAG 1 cut(s) 735
BssT1I CCWWGG 1 cut(s) 350
Bst2BI CACGAG 1 cut(s) 735
Bst2UI CCWGG 5 cut(s) 192, 658, 983, 1115, 1160
Bst4CI ACNGT 5 cut(s) 327, 481, 713, 1067, 1236
Bst6I CTCTTC 1 cut(s) 792
BstC8I GCNNGC 1 cut(s) 281
BstDEI CTNAG 5 cut(s) 150, 162, 310, 318, 561
BstEII GGTNACC 1 cut(s) 1109
BstENI CCTNNNNNAGG 1 cut(s) 851
BstF5I GGATG 5 cut(s) 135, 336, 409, 1135, 1168
BstH2I RGCGCY 1 cut(s) 509
BstHHI GCGC 2 cut(s) 244, 508
BstKTI GATC 6 cut(s) 58, 376, 460, 841, 908, 981
BstMAI GTCTC 3 cut(s) 218, 917, 1056
BstMBI GATC 6 cut(s) 55, 373, 457, 838, 905, 978
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstNI CCWGG 5 cut(s) 192, 658, 983, 1115, 1160
BstNSI RCATGY 3 cut(s) 283, 367, 953
BstPI GGTNACC 1 cut(s) 1109
BstSCI CCNGG 5 cut(s) 190, 656, 981, 1113, 1158
BstSFI CTRYAG 4 cut(s) 198, 471, 494, 1086
BstV1I GCAGC 1 cut(s) 277
BstX2I RGATCY 2 cut(s) 373, 978
BstYI RGATCY 2 cut(s) 373, 978
BsuRI GGCC 2 cut(s) 8, 408
BtsCI GGATG 5 cut(s) 135, 336, 409, 1135, 1168
BtsI GCAGTG 1 cut(s) 1083
BtsIMutI CAGTG 4 cut(s) 332, 1002, 1072, 1083
BveI ACCTGC 1 cut(s) 595
Cac8I GCNNGC 1 cut(s) 281
CaiI CAGNNNCTG 1 cut(s) 1021
CciI TCATGA 1 cut(s) 483
CfoI GCGC 2 cut(s) 244, 508
CseI GACGC 1 cut(s) 677
Csp6I GTAC 2 cut(s) 38, 967
CviAII CATG 6 cut(s) 280, 364, 484, 515, 950, 1030
CviJI RGCY 8 cut(s) 8, 155, 317, 408, 552, 700, 820, 1021
CviKI_1 RGCY 8 cut(s) 8, 155, 317, 408, 552, 700, 820, 1021
CviQI GTAC 2 cut(s) 38, 967
DdeI CTNAG 5 cut(s) 150, 162, 310, 318, 561
DpnI GATC 6 cut(s) 57, 375, 459, 840, 907, 980
DpnII GATC 6 cut(s) 55, 373, 457, 838, 905, 978
DrdI GACNNNNNNGTC 1 cut(s) 659
DseDI GACNNNNNNGTC 1 cut(s) 659
EaeI YGGCCR 1 cut(s) 6
Eam1104I CTCTTC 1 cut(s) 792
EarI CTCTTC 1 cut(s) 792
Eco130I CCWWGG 1 cut(s) 350
Eco31I GGTCTC 2 cut(s) 218, 917
Eco32I GATATC 1 cut(s) 1105
Eco57I CTGAAG 2 cut(s) 816, 1058
Eco91I GGTNACC 1 cut(s) 1109
EcoNI CCTNNNNNAGG 1 cut(s) 851
EcoO65I GGTNACC 1 cut(s) 1109
EcoRI GAATTC 1 cut(s) 832
EcoRII CCWGG 5 cut(s) 190, 656, 981, 1113, 1158
EcoRV GATATC 1 cut(s) 1105
EcoT14I CCWWGG 1 cut(s) 350
ErhI CCWWGG 1 cut(s) 350
FaeI CATG 6 cut(s) 283, 367, 487, 518, 953, 1033
FalI AAGNNNNNCTT 2 cut(s) 563, 595
FaqI GGGAC 2 cut(s) 722, 1063
FatI CATG 6 cut(s) 279, 363, 483, 514, 949, 1029
FauI CCCGC 2 cut(s) 1049, 1117
FauNDI CATATG 1 cut(s) 442
FblI GTMKAC 2 cut(s) 86, 651
Fnu4HI GCNGC 2 cut(s) 291, 315
FokI GGATG 5 cut(s) 142, 343, 416, 1142, 1175
Fsp4HI GCNGC 2 cut(s) 291, 315
FspBI CTAG 3 cut(s) 351, 701, 935
GlaI GCGC 2 cut(s) 243, 507
GluI GCNGC 2 cut(s) 291, 315
GsuI CTGGAG 6 cut(s) 295, 741, 978, 1004, 1058, 1142
HaeII RGCGCY 1 cut(s) 509
HaeIII GGCC 2 cut(s) 8, 408
HgaI GACGC 1 cut(s) 677
HhaI GCGC 2 cut(s) 244, 508
Hin1II CATG 6 cut(s) 283, 367, 487, 518, 953, 1033
Hin6I GCGC 2 cut(s) 242, 506
HinP1I GCGC 2 cut(s) 242, 506
HincII GTYRAC 2 cut(s) 870, 943
HindII GTYRAC 2 cut(s) 870, 943
HinfI GANTC 6 cut(s) 91, 102, 487, 790, 1033, 1155
HpaI GTTAAC 2 cut(s) 870, 943
HphI GGTGA 2 cut(s) 766, 1189
Hpy166II GTNNAC 4 cut(s) 87, 652, 870, 943
Hpy188I TCNGA 5 cut(s) 361, 423, 838, 1047, 1154
Hpy188III TCNNGA 7 cut(s) 401, 484, 672, 692, 707, 794, 1037
Hpy8I GTNNAC 4 cut(s) 87, 652, 870, 943
Hpy99I CGWCG 2 cut(s) 25, 693
HpyAV CCTTC 1 cut(s) 127
HpyCH4III ACNGT 5 cut(s) 327, 481, 713, 1067, 1236
HpyCH4IV ACGT 1 cut(s) 20
HpyCH4V TGCA 6 cut(s) 113, 467, 496, 604, 1088, 1232
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpyF3I CTNAG 5 cut(s) 150, 162, 310, 318, 561
HpySE526I ACGT 1 cut(s) 20
Hsp92II CATG 6 cut(s) 283, 367, 487, 518, 953, 1033
HspAI GCGC 2 cut(s) 242, 506
KspAI GTTAAC 2 cut(s) 870, 943
Kzo9I GATC 6 cut(s) 55, 373, 457, 838, 905, 978
LmnI GCTCC 5 cut(s) 160, 276, 997, 1155, 1166
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 3 cut(s) 324, 476, 749
MaeI CTAG 3 cut(s) 351, 701, 935
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 5 cut(s) 264, 592, 929, 1090, 1109
MalI GATC 6 cut(s) 57, 375, 459, 840, 907, 980
MbiI CCGCTC 1 cut(s) 1169
MboI GATC 6 cut(s) 55, 373, 457, 838, 905, 978
MboII GAAGA 5 cut(s) 36, 39, 586, 809, 1197
MflI RGATCY 2 cut(s) 373, 978
MhlI GDGCHC 1 cut(s) 994
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 5 cut(s) 106, 393, 424, 832, 876
MluNI TGGCCA 1 cut(s) 8
MlyI GAGTC 3 cut(s) 96, 1027, 1149
MmeI TCCRAC 1 cut(s) 1177
Mox20I TGGCCA 1 cut(s) 8
MroXI GAANNNNTTC 1 cut(s) 801
MscI TGGCCA 1 cut(s) 8
MseI TTAA 8 cut(s) 138, 168, 510, 519, 570, 731, 869, 942
MslI CAYNNNNRTG 2 cut(s) 368, 599
Msp20I TGGCCA 1 cut(s) 8
MspA1I CMGCKG 1 cut(s) 1124
MspR9I CCNGG 5 cut(s) 192, 658, 983, 1115, 1160
Mva1269I GAATGC 1 cut(s) 1058
MvaI CCWGG 5 cut(s) 192, 658, 983, 1115, 1160
MwoI GCNNNNNNNGC 1 cut(s) 14
NdeI CATATG 1 cut(s) 442
NdeII GATC 6 cut(s) 55, 373, 457, 838, 905, 978
NlaIII CATG 6 cut(s) 283, 367, 487, 518, 953, 1033
NlaIV GGNNCC 3 cut(s) 156, 375, 980
NmeAIII GCCGAG 2 cut(s) 270, 877
NmuCI GTSAC 2 cut(s) 592, 929
NspI RCATGY 3 cut(s) 283, 367, 953
PaeI GCATGC 1 cut(s) 283
PagI TCATGA 1 cut(s) 483
PctI GAATGC 1 cut(s) 1058
PdmI GAANNNNTTC 1 cut(s) 801
PfeI GAWTC 3 cut(s) 91, 487, 790
PfoI TCCNGGA 2 cut(s) 981, 1158
PkrI GCNGC 2 cut(s) 292, 316
PleI GAGTC 3 cut(s) 96, 1027, 1149
PpsI GAGTC 3 cut(s) 96, 1027, 1149
PshBI ATTAAT 1 cut(s) 168
Psp6I CCWGG 5 cut(s) 190, 656, 981, 1113, 1158
PspEI GGTNACC 1 cut(s) 1109
PspGI CCWGG 5 cut(s) 190, 656, 981, 1113, 1158
PspN4I GGNNCC 3 cut(s) 156, 375, 980
PstI CTGCAG 2 cut(s) 498, 1090
PstNI CAGNNNCTG 1 cut(s) 1021
PsuI RGATCY 2 cut(s) 373, 978
RsaI GTAC 2 cut(s) 39, 968
RsaNI GTAC 2 cut(s) 38, 967
RseI CAYNNNNRTG 2 cut(s) 368, 599
SaqAI TTAA 8 cut(s) 138, 168, 510, 519, 570, 731, 869, 942
SatI GCNGC 2 cut(s) 291, 315
Sau3AI GATC 6 cut(s) 55, 373, 457, 838, 905, 978
SchI GAGTC 3 cut(s) 96, 1027, 1149
ScrFI CCNGG 5 cut(s) 192, 658, 983, 1115, 1160
SduI GDGCHC 1 cut(s) 994
SfaNI GCATC 3 cut(s) 324, 476, 749
SfcI CTRYAG 4 cut(s) 198, 471, 494, 1086
SmiMI CAYNNNNRTG 2 cut(s) 368, 599
SphI GCATGC 1 cut(s) 283
Sse9I AATT 5 cut(s) 106, 393, 424, 832, 876
SsiI CCGC 4 cut(s) 314, 1056, 1124, 1169
SspMI CTAG 3 cut(s) 351, 701, 935
StyD4I CCNGG 5 cut(s) 190, 656, 981, 1113, 1158
StyI CCWWGG 1 cut(s) 350
TaaI ACNGT 5 cut(s) 327, 481, 713, 1067, 1236
TaiI ACGT 1 cut(s) 23
TaqI TCGA 3 cut(s) 805, 904, 922
TasI AATT 5 cut(s) 106, 393, 424, 832, 876
TatI WGTACW 1 cut(s) 966
TauI GCSGC 1 cut(s) 317
TfiI GAWTC 3 cut(s) 91, 487, 790
Tru1I TTAA 8 cut(s) 138, 168, 510, 519, 570, 731, 869, 942
Tru9I TTAA 8 cut(s) 138, 168, 510, 519, 570, 731, 869, 942
TscAI CASTG 4 cut(s) 332, 1002, 1072, 1090
TseFI GTSAC 2 cut(s) 592, 929
TseI GCWGC 1 cut(s) 290
Tsp45I GTSAC 2 cut(s) 592, 929
TspDTI ATGAA 5 cut(s) 146, 244, 459, 500, 776
TspGWI ACGGA 1 cut(s) 407
TspRI CASTG 4 cut(s) 332, 1002, 1072, 1090
VspI ATTAAT 1 cut(s) 168
XagI CCTNNNNNAGG 1 cut(s) 851
XapI RAATTY 2 cut(s) 424, 832
XceI RCATGY 3 cut(s) 283, 367, 953
XcmI CCANNNNNNNNNTGG 1 cut(s) 1218
XmaJI CCTAGG 1 cut(s) 350
XmiI GTMKAC 2 cut(s) 86, 651
XmnI GAANNNNTTC 1 cut(s) 801
XspI CTAG 3 cut(s) 351, 701, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.