pycom15g16310

Plays an essential role in chain termination during de novo fatty acid synthesis

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
11431476 .. 11434088
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g16310.1

Sequence Viewer

Length: 1248 bp
ATGGTTGCCACTGCCGCTACTTCGTCATTCTTTCCGGTTTCTTCTCCCAACTCAGGCTCTAGCACCAAGAACGCCAAGCTTGGGTCGGCCAATTTAGGACTCAAATCGAAATCTGCATCGGGTGGTTTGCAGGTAAAGGTAAATGCTCAAGCCCCTCCAAAGATAAATGGAACTAGCGTTGGTTTGGCAACTGTGGAAAGTGGGAAGCATGGGGATGACATCTCATCCCCTCCTGCACGGACTTTCATTAACCAATTACCTGACTGGAGTGTGCTCCTTGCTGCTATTACCACAATCTTCTTGGCTGCAGAGAAGCAATGGACGATGCTTGATTGGAAACCCAAGCGGCCTGACATGCTCATTGACACATTTGGTCTAGGTCGAATTGTTCAGCATGGTCTTGTCTTTCGCCAGAACTTCTCAATTAGATCATATGAAATAGGTGCTGATCGTACGGCTTCAATAGAGACGTTAATGAATCATTTACAGGAAACAGCACTTAATCATGTTAAGACTGCTGGGCTTCTGGGAGATGGCTTTGGTTCAACTCCAGAGATGACTGTAAGAAACCTGATATGGGTGGTAACGAAAATGCAGGTTGTGGTAGACCGCTATCCTACTTGGGGTGACATTGTTCAAGTTGACACTTGGGTTAGTGCCTCTGGGAAGAATGGAATGCGTCGTGATTGGATAATCCAGGATTTGAAAACTGGCCAAATTCTAACAAGAGCCTCCAGTGTGTGGGTGATGATGAATAAAGTGACGAGGAGATTATCAAAGATGCCTGATGAAGTTCGAGGTGAAATAGAGTCTTTTTTTATGAATTCTCCTCCTATTGTGGAGGAAGATGGCAGGAAACTGCCAAAACTTGACGACAAAAGAGCGGACTTTGTTCGCTCTGGTTTAACTCCAAGGTGGAGTGATTTAGATGTCAATCAGCACGTTAATAATGTGAAGTACATTGGCTGGATCCTCGAGAGTGCTCCCTTACCAATTCTGGAGAGTCATGAGCTCTCTTCTTTGACTCTGGAGTATAGGAGGGAGTGTGGGAGGGACAGTGTGCTTCAGTCGCTGACTGCAGTCTCAGGTGCTGATATCGGCAACCTGGGAAGTAATGGCGGGGTGGAGTGCCAGCACATGCTTCGACTCGAGGAGGGGGCCGAGATTGTGAGGGGAAGGACTGAGTGGAAGCCCAAATACGCCAACAATCTTGGGATTGTGGGTCATCTTCCAGGGGAAAGTGCATAG

Protein Analysis

416

Amino Acids

45.54

Weight (kDa)

8.4

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl-thio_N PF12590 1 - 122 1.8e-51 Acyl-ATP thioesterase
Acyl-ACP_TE PF01643 133 - 268 3e-41 Acyl-ACP thioesterase N-terminal domain
Acyl-ACP_TE_C PF20791 296 - 397 1.7e-29 Acyl-ACP thioesterase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 121, 586
AccB7I CCANNNNNTGG 1 cut(s) 741
AccBSI CCGCTC 1 cut(s) 884
AccI GTMKAC 1 cut(s) 606
AciI CCGC 5 cut(s) 15, 346, 610, 884, 1119
AclWI GGATC 2 cut(s) 964, 977
AcoI YGGCCR 2 cut(s) 87, 712
AcsI RAATTY 2 cut(s) 717, 823
AcuI CTGAAG 1 cut(s) 1049
AfaI GTAC 2 cut(s) 454, 959
AfiI CCNNNNNNNGG 5 cut(s) 53, 81, 577, 623, 741
AgsI TTSAA 4 cut(s) 462, 546, 638, 706
AjnI CCWGG 3 cut(s) 696, 1104, 1231
AluBI AGCT 2 cut(s) 79, 1012
AluI AGCT 2 cut(s) 79, 1012
Alw21I GWGCWC 3 cut(s) 276, 985, 1014
Alw26I GTCTC 2 cut(s) 461, 1087
AlwI GGATC 2 cut(s) 964, 977
AlwNI CAGNNNCTG 2 cut(s) 1072, 1091
Ama87I CYCGRG 2 cut(s) 974, 1148
AoxI GGCC 4 cut(s) 87, 347, 712, 1158
ApeKI GCWGC 2 cut(s) 281, 305
ApoI RAATTY 2 cut(s) 717, 823
AspS9I GGNCC 1 cut(s) 1158
AsuHPI GGTGA 3 cut(s) 638, 757, 812
AvaI CYCGRG 2 cut(s) 974, 1148
BalI TGGCCA 1 cut(s) 714
BamHI GGATCC 1 cut(s) 969
BanII GRGCYC 1 cut(s) 1014
BarI GAAGNNNNNNTAC 2 cut(s) 1181, 1213
Bbv12I GWGCWC 3 cut(s) 276, 985, 1014
BbvI GCAGC 2 cut(s) 268, 292
BccI CCATC 2 cut(s) 527, 842
BceAI ACGGC 1 cut(s) 471
BcgI CGANNNNNNTGC 2 cut(s) 1124, 1158
BciT130I CCWGG 3 cut(s) 698, 1106, 1233
BcoDI GTCTC 2 cut(s) 461, 1087
BfaI CTAG 3 cut(s) 60, 174, 377
BfmI CTRYAG 2 cut(s) 306, 1077
BfuAI ACCTGC 2 cut(s) 121, 586
BisI GCNGC 4 cut(s) 15, 282, 306, 347
BlsI GCNGC 4 cut(s) 16, 283, 307, 348
Bme1390I CCNGG 3 cut(s) 698, 1106, 1233
BmeT110I CYCGRG 2 cut(s) 974, 1148
BmgT120I GGNCC 1 cut(s) 1158
BmiI GGNNCC 2 cut(s) 971, 1159
BmrFI CCNGG 3 cut(s) 698, 1106, 1233
BmsI GCATC 3 cut(s) 125, 315, 771
BoxI GACNNNNGTC 1 cut(s) 1079
BpmI CTGGAG 5 cut(s) 286, 534, 718, 1019, 1049
BpuEI CTTGAG 1 cut(s) 132
BsaBI GATNNNNATC 1 cut(s) 933
BsaJI CCNNGG 3 cut(s) 911, 1105, 1232
BsaWI WCCGGW 1 cut(s) 34
BsaXI ACNNNNNCTCC 4 cut(s) 1030, 1042, 1060, 1072
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 81, 577, 623, 741
Bse1I ACTGG 3 cut(s) 269, 715, 735
Bse3DI GCAATG 1 cut(s) 323
Bse8I GATNNNNATC 1 cut(s) 933
BseBI CCWGG 3 cut(s) 698, 1106, 1233
BseDI CCNNGG 3 cut(s) 911, 1105, 1232
BseGI GGATG 2 cut(s) 220, 224
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 5 cut(s) 53, 81, 577, 623, 741
BseMI GCAATG 1 cut(s) 323
BseMII CTCAG 3 cut(s) 66, 1098, 1173
BseNI ACTGG 3 cut(s) 269, 715, 735
BseRI GAGGAG 3 cut(s) 781, 819, 1166
BseXI GCAGC 2 cut(s) 268, 292
BseYI CCCAGC 1 cut(s) 518
BsgI GTGCAG 1 cut(s) 219
BshFI GGCC 4 cut(s) 89, 349, 714, 1160
BsiHKAI GWGCWC 3 cut(s) 276, 985, 1014
BsiHKCI CYCGRG 2 cut(s) 974, 1148
BsiSI CCGG 1 cut(s) 35
BsiWI CGTACG 1 cut(s) 452
BslFI GGGAC 1 cut(s) 1067
BslI CCNNNNNNNGG 5 cut(s) 53, 81, 577, 623, 741
BsmAI GTCTC 2 cut(s) 461, 1087
BsmBI CGTCTC 1 cut(s) 461
BsmFI GGGAC 1 cut(s) 1067
BsmI GAATGC 1 cut(s) 681
BsnI GGCC 4 cut(s) 89, 349, 714, 1160
BsoBI CYCGRG 2 cut(s) 974, 1148
Bsp1286I GDGCHC 3 cut(s) 276, 985, 1014
Bsp143I GATC 3 cut(s) 428, 448, 969
BspACI CCGC 5 cut(s) 15, 346, 610, 884, 1119
BspANI GGCC 4 cut(s) 89, 349, 714, 1160
BspCNI CTCAG 3 cut(s) 65, 1097, 1174
BspHI TCATGA 1 cut(s) 1006
BspLI GGNNCC 2 cut(s) 971, 1159
BspMAI CTGCAG 2 cut(s) 310, 1081
BspMI ACCTGC 2 cut(s) 121, 586
BspPI GGATC 2 cut(s) 964, 977
BsrBI CCGCTC 1 cut(s) 884
BsrDI GCAATG 1 cut(s) 323
BsrI ACTGG 3 cut(s) 269, 715, 735
BssECI CCNNGG 3 cut(s) 911, 1105, 1232
BssMI GATC 3 cut(s) 428, 448, 969
BssT1I CCWWGG 1 cut(s) 911
Bst2UI CCWGG 3 cut(s) 698, 1106, 1233
Bst4CI ACNGT 3 cut(s) 193, 562, 1058
Bst6I CTCTTC 1 cut(s) 1021
BstC8I GCNNGC 1 cut(s) 1133
BstDEI CTNAG 3 cut(s) 52, 1084, 1182
BstF5I GGATG 2 cut(s) 220, 224
BstKTI GATC 3 cut(s) 431, 451, 972
BstMAI GTCTC 2 cut(s) 461, 1087
BstMBI GATC 3 cut(s) 428, 448, 969
BstMWI GCNNNNNNNGC 3 cut(s) 14, 355, 1069
BstNI CCWGG 3 cut(s) 698, 1106, 1233
BstNSI RCATGY 2 cut(s) 358, 1141
BstPAI GACNNNNGTC 1 cut(s) 1079
BstSCI CCNGG 3 cut(s) 696, 1104, 1231
BstSFI CTRYAG 2 cut(s) 306, 1077
BstV1I GCAGC 2 cut(s) 268, 292
BstX2I RGATCY 1 cut(s) 969
BstYI RGATCY 1 cut(s) 969
BsuRI GGCC 4 cut(s) 89, 349, 714, 1160
BtsCI GGATG 2 cut(s) 220, 224
BtsI GCAGTG 1 cut(s) 9
BtsIMutI CAGTG 3 cut(s) 9, 742, 1063
BveI ACCTGC 2 cut(s) 121, 586
Cac8I GCNNGC 1 cut(s) 1133
CaiI CAGNNNCTG 2 cut(s) 1072, 1091
CciI TCATGA 1 cut(s) 1006
Cfr13I GGNCC 1 cut(s) 1158
CseI GACGC 1 cut(s) 668
Csp6I GTAC 2 cut(s) 453, 958
CviAII CATG 6 cut(s) 209, 355, 395, 506, 1007, 1138
CviQI GTAC 2 cut(s) 453, 958
DdeI CTNAG 3 cut(s) 52, 1084, 1182
DpnI GATC 3 cut(s) 430, 450, 971
DpnII GATC 3 cut(s) 428, 448, 969
EaeI YGGCCR 2 cut(s) 87, 712
Eam1104I CTCTTC 1 cut(s) 1021
EarI CTCTTC 1 cut(s) 1021
Ecl136II GAGCTC 1 cut(s) 1012
Eco130I CCWWGG 1 cut(s) 911
Eco24I GRGCYC 1 cut(s) 1014
Eco32I GATATC 1 cut(s) 1096
Eco53kI GAGCTC 1 cut(s) 1012
Eco57I CTGAAG 1 cut(s) 1049
Eco88I CYCGRG 2 cut(s) 974, 1148
EcoICRI GAGCTC 1 cut(s) 1012
EcoRI GAATTC 1 cut(s) 823
EcoRII CCWGG 3 cut(s) 696, 1104, 1231
EcoRV GATATC 1 cut(s) 1096
EcoT14I CCWWGG 1 cut(s) 911
EcoT38I GRGCYC 1 cut(s) 1014
ErhI CCWWGG 1 cut(s) 911
Esp3I CGTCTC 1 cut(s) 461
FaeI CATG 6 cut(s) 212, 358, 398, 509, 1010, 1141
FaqI GGGAC 1 cut(s) 1067
FatI CATG 6 cut(s) 208, 354, 394, 505, 1006, 1137
FauI CCCGC 1 cut(s) 1112
FauNDI CATATG 1 cut(s) 433
FblI GTMKAC 1 cut(s) 606
Fnu4HI GCNGC 4 cut(s) 15, 282, 306, 347
FokI GGATG 2 cut(s) 211, 227
FriOI GRGCYC 1 cut(s) 1014
Fsp4HI GCNGC 4 cut(s) 15, 282, 306, 347
FspBI CTAG 3 cut(s) 60, 174, 377
GluI GCNGC 4 cut(s) 15, 282, 306, 347
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 5 cut(s) 286, 534, 718, 1019, 1049
HaeIII GGCC 4 cut(s) 89, 349, 714, 1160
HapII CCGG 1 cut(s) 35
HgaI GACGC 1 cut(s) 668
Hin1II CATG 6 cut(s) 212, 358, 398, 509, 1010, 1141
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 6 cut(s) 99, 478, 809, 1003, 1024, 1146
HpaII CCGG 1 cut(s) 35
HphI GGTGA 3 cut(s) 638, 757, 812
Hpy166II GTNNAC 2 cut(s) 607, 643
Hpy188III TCNNGA 6 cut(s) 551, 683, 976, 998, 1007, 1028
Hpy8I GTNNAC 2 cut(s) 607, 643
Hpy99I CGWCG 1 cut(s) 684
HpyAV CCTTC 1 cut(s) 1170
HpyCH4III ACNGT 3 cut(s) 193, 562, 1058
HpyCH4IV ACGT 2 cut(s) 470, 942
HpyCH4V TGCA 7 cut(s) 116, 130, 236, 308, 595, 1079, 1244
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 355, 1069
HpyF3I CTNAG 3 cut(s) 52, 1084, 1182
HpySE526I ACGT 2 cut(s) 470, 942
Hsp92II CATG 6 cut(s) 212, 358, 398, 509, 1010, 1141
Kzo9I GATC 3 cut(s) 428, 448, 969
LmnI GCTCC 2 cut(s) 279, 988
Lsp1109I GCAGC 2 cut(s) 268, 292
LweI GCATC 3 cut(s) 125, 315, 771
MaeI CTAG 3 cut(s) 60, 174, 377
MaeII ACGT 2 cut(s) 470, 942
MaeIII GTNAC 3 cut(s) 583, 626, 760
MalI GATC 3 cut(s) 430, 450, 971
MbiI CCGCTC 1 cut(s) 884
MboI GATC 3 cut(s) 428, 448, 969
MboII GAAGA 6 cut(s) 33, 289, 679, 857, 1008, 1220
MflI RGATCY 1 cut(s) 969
MhlI GDGCHC 3 cut(s) 276, 985, 1014
MlsI TGGCCA 1 cut(s) 714
MluCI AATT 7 cut(s) 91, 254, 384, 423, 717, 823, 993
MluNI TGGCCA 1 cut(s) 714
MlyI GAGTC 5 cut(s) 93, 818, 1012, 1018, 1140
Mox20I TGGCCA 1 cut(s) 714
MscI TGGCCA 1 cut(s) 714
MseI TTAA 6 cut(s) 249, 473, 501, 510, 905, 945
MslI CAYNNNNRTG 1 cut(s) 213
Msp20I TGGCCA 1 cut(s) 714
MspI CCGG 1 cut(s) 35
MspR9I CCNGG 3 cut(s) 698, 1106, 1233
Mva1269I GAATGC 1 cut(s) 681
MvaI CCWGG 3 cut(s) 698, 1106, 1233
MwoI GCNNNNNNNGC 3 cut(s) 14, 355, 1069
NdeI CATATG 1 cut(s) 433
NdeII GATC 3 cut(s) 428, 448, 969
NlaIII CATG 6 cut(s) 212, 358, 398, 509, 1010, 1141
NlaIV GGNNCC 2 cut(s) 971, 1159
NmeAIII GCCGAG 1 cut(s) 1186
NmuCI GTSAC 2 cut(s) 626, 760
NspI RCATGY 2 cut(s) 358, 1141
PaeR7I CTCGAG 2 cut(s) 974, 1148
PagI TCATGA 1 cut(s) 1006
PctI GAATGC 1 cut(s) 681
PfeI GAWTC 1 cut(s) 478
Pfl23II CGTACG 1 cut(s) 452
PflMI CCANNNNNTGG 1 cut(s) 741
PfoI TCCNGGA 1 cut(s) 696
PkrI GCNGC 4 cut(s) 16, 283, 307, 348
PleI GAGTC 5 cut(s) 93, 817, 1011, 1018, 1140
PpsI GAGTC 5 cut(s) 93, 817, 1011, 1018, 1140
PshAI GACNNNNGTC 1 cut(s) 1079
Psp124BI GAGCTC 1 cut(s) 1014
Psp6I CCWGG 3 cut(s) 696, 1104, 1231
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 3 cut(s) 696, 1104, 1231
PspLI CGTACG 1 cut(s) 452
PspN4I GGNNCC 2 cut(s) 971, 1159
PspPI GGNCC 1 cut(s) 1158
PspXI VCTCGAGB 1 cut(s) 1148
PstI CTGCAG 2 cut(s) 310, 1081
PstNI CAGNNNCTG 2 cut(s) 1072, 1091
PsuI RGATCY 1 cut(s) 969
RsaI GTAC 2 cut(s) 454, 959
RsaNI GTAC 2 cut(s) 453, 958
RseI CAYNNNNRTG 1 cut(s) 213
SacI GAGCTC 1 cut(s) 1014
SaqAI TTAA 6 cut(s) 249, 473, 501, 510, 905, 945
SatI GCNGC 4 cut(s) 15, 282, 306, 347
Sau3AI GATC 3 cut(s) 428, 448, 969
Sau96I GGNCC 1 cut(s) 1158
SchI GAGTC 5 cut(s) 93, 818, 1012, 1018, 1140
ScrFI CCNGG 3 cut(s) 698, 1106, 1233
SduI GDGCHC 3 cut(s) 276, 985, 1014
SfaNI GCATC 3 cut(s) 125, 315, 771
SfcI CTRYAG 2 cut(s) 306, 1077
Sfr274I CTCGAG 2 cut(s) 974, 1148
SlaI CTCGAG 2 cut(s) 974, 1148
SmiMI CAYNNNNRTG 1 cut(s) 213
SmlI CTYRAG 3 cut(s) 147, 974, 1148
SmoI CTYRAG 3 cut(s) 147, 974, 1148
Sse9I AATT 7 cut(s) 91, 254, 384, 423, 717, 823, 993
SsiI CCGC 5 cut(s) 15, 346, 610, 884, 1119
SspMI CTAG 3 cut(s) 60, 174, 377
SstI GAGCTC 1 cut(s) 1014
StyD4I CCNGG 3 cut(s) 696, 1104, 1231
StyI CCWWGG 1 cut(s) 911
TaaI ACNGT 3 cut(s) 193, 562, 1058
TaiI ACGT 2 cut(s) 473, 945
TaqI TCGA 6 cut(s) 107, 382, 796, 975, 1144, 1149
TasI AATT 7 cut(s) 91, 254, 384, 423, 717, 823, 993
TatI WGTACW 1 cut(s) 957
TauI GCSGC 2 cut(s) 17, 349
TfiI GAWTC 1 cut(s) 478
Tru1I TTAA 6 cut(s) 249, 473, 501, 510, 905, 945
Tru9I TTAA 6 cut(s) 249, 473, 501, 510, 905, 945
TscAI CASTG 3 cut(s) 16, 742, 1063
TseFI GTSAC 2 cut(s) 626, 760
TseI GCWGC 2 cut(s) 281, 305
Tsp45I GTSAC 2 cut(s) 626, 760
TspDTI ATGAA 6 cut(s) 235, 450, 491, 767, 804, 836
TspGWI ACGGA 1 cut(s) 253
TspRI CASTG 3 cut(s) 16, 742, 1063
Van91I CCANNNNNTGG 1 cut(s) 741
XapI RAATTY 2 cut(s) 717, 823
XceI RCATGY 2 cut(s) 358, 1141
XcmI CCANNNNNNNNNTGG 1 cut(s) 298
XhoI CTCGAG 2 cut(s) 974, 1148
XmiI GTMKAC 1 cut(s) 606
XspI CTAG 3 cut(s) 60, 174, 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.