Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0005858

Physical Location & Seq

Genomic Coordinates Forward (+)

5451905 .. 5453944

Gene Structure 2040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G074600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGATGCTTACATCTGCTCCGCCAACACTCCCCATGCCAAATAAATCAATATCATGTTGTGGAGGAACAAATTATGGCTTTAGTCAAAGTAAGCCTAATTCTGCACCTGCTATTAATTTTCAAGCAAAGTTCTTTCCCAAAGAAAATGTCATCACTTCCCGAAAACAAGATGATGATATCACACCCGCAGCAGCTGCTAAGAAAATACCACAACATTTGAACTGCGAATCGAGGAAGTTGGATGGGGTTTATGACACTTTTGGAGGAAAATTGGGGCAGGGGGGGCTTGTTTTTCAACAGAACTTCTCAATTAGATCATATGATTTAGGCCCTAATGGCAAAGCAACCATAGGGTGCTTGATGGAACGCTTACAGGAAACATCAATTCAGCATTGTAGGAGTGTTGGGCTCTATGCTGGTGGTTTTGGTTCGACACCAGAGATGAGCAAAAGAGGCCTAGTATGGGTGCTGTGTAAATTGCAGACTGTAGTGGAAAAATATCCTTCTTGGGCTGATGTTATTCAAATTGATACCTGGACTGGTGCATCAGGAAACAATGGTCTGTTCCGGGATTGGATCTTTCGTGATTACAGCACCGGAGAGATCTTAATTCGAGCAACCAGTCTTTATATGATGATGCACATGAAGACAAGGAAATTTTCTAAAGTTACAGCAGAAATCACAGATGAGTTAAGATCTGCTCTCATGGATTCTGATCCTCTCATTGACATCAAAAATGCTAAACTAGGACGATTGGATATTGATGCTAGAAACTATTTTCAAACATCTGTAGCAAAGCCTGGTTGGAGTGATTTGGATGTCAATCAGCACGTGAGCCATGCAAAATACATAGACTGGGTTTTCGAGAGCATTCCCTTCTCAGTGCTGGAGACTCATGAGCTTTCGTCTATGACGTTGGAGTATCGAAGTGAGTGTCAGAGGGACAGCGCGGTGCAGTCTCTGACTGCAGTTGCTAGAGATGGAACAGGTGACTCCACTCATAACCAAGGGGTAGAGTTTGATCACTTGCTTCGCCTCGAGACAGGGTCGAAAGTTTTGAGGGCAAGGACTGTGTGGAAGCCAATATGTGATGGCTTTTTTAGCACACTGAAGTTTCCAGCAACAAATGGATGTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00061 ko01100 ko01212 map00061 map01100 map01212

Pfam Domains

Protein Families

Acyl-ACP_TE

Protein Analysis

380

Amino Acids

42.13

Weight (kDa)

8.01

Isoelectric Point (pI)

37.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005858)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08510
fragaria_vesca	FvH4_1g04250 FvH4_1g04250 FvH4_1g04250 FvH4_6g30873
malus_domestica	MD02G1042500.v1.1 MD02G1062000.v1.1 MD09G1215700.v1.1
prunus_persica	Prupe.3G074600_v2.0.a1 Prupe.3G074600_v2.0.a1 Prupe.3G074700_v2.0.a1 Prupe.7G234600_v2.0.a1 Prupe.7G234600_v2.0.a1 Prupe.7G234600_v2.0.a1
pyrus_communis	pycom02g03520 pycom15g16310
rosa_chinensis	RchiOBHm_Chr2g0089811
rosa_laevigata	RLG00000016057
rosa_multiflora	Rmu_sc0000665.1_g000007
rosa_roxburghii	Rroxscaffold_2G00151600
rosa_rugosa	Rorug02G0003400 Rorug02G0003500
rosa_samantha	Rh2AG048600 Rh2AG389900 Rh2BG047400 Rh2CG049500 Rh2CG377400
rosa_wichuraiana	Rw2G004180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	115
Acc36I	ACCTGC	1 cut(s)	115
AccII	CGCG	1 cut(s)	950
AciI	CCGC	3 cut(s)	20, 186, 950
AclWI	GGATC	2 cut(s)	584, 710
AcsI	RAATTY	1 cut(s)	656
AcuI	CTGAAG	1 cut(s)	1130
AcvI	CACGTG	1 cut(s)	832
AfaI	GTAC	1 cut(s)	1135
AfiI	CCNNNNNNNGG	1 cut(s)	463
AgsI	TTSAA	5 cut(s)	122, 220, 296, 524, 782
AjnI	CCWGG	2 cut(s)	533, 799
AluBI	AGCT	2 cut(s)	194, 901
AluI	AGCT	2 cut(s)	194, 901
Alw26I	GTCTC	3 cut(s)	884, 963, 1034
AlwI	GGATC	2 cut(s)	584, 710
AlwNI	CAGNNNCTG	2 cut(s)	194, 961
Ama87I	CYCGRG	1 cut(s)	1037
AoxI	GGCC	2 cut(s)	328, 454
ApeKI	GCWGC	3 cut(s)	188, 191, 194
ApoI	RAATTY	1 cut(s)	656
ArsI	GACNNNNNNTTYG	6 cut(s)	132, 164, 845, 877, 919, 951
AseI	ATTAAT	1 cut(s)	114
AspLEI	GCGC	1 cut(s)	950
AspS9I	GGNCC	1 cut(s)	329
AsuC2I	CCSGG	1 cut(s)	569
AsuHPI	GGTGA	1 cut(s)	1001
AvaI	CYCGRG	1 cut(s)	1037
BanII	GRGCYC	1 cut(s)	411
BbrPI	CACGTG	1 cut(s)	832
BbsI	GAAGAC	1 cut(s)	653
BbvI	GCAGC	3 cut(s)	181, 200, 203
BccI	CCATC	4 cut(s)	236, 355, 974, 1085
BciT130I	CCWGG	2 cut(s)	535, 801
BclI	TGATCA	1 cut(s)	1021
BcnI	CCSGG	1 cut(s)	569
BcoDI	GTCTC	3 cut(s)	884, 963, 1034
BfaI	CTAG	4 cut(s)	458, 746, 768, 975
BfmI	CTRYAG	3 cut(s)	486, 789, 966
BfuAI	ACCTGC	1 cut(s)	115
BglI	GCCNNNNNGGC	1 cut(s)	336
BglII	AGATCT	2 cut(s)	603, 695
BisI	GCNGC	3 cut(s)	189, 192, 195
BlsI	GCNGC	3 cut(s)	190, 193, 196
Bme1390I	CCNGG	3 cut(s)	535, 569, 801
BmeT110I	CYCGRG	1 cut(s)	1037
BmgT120I	GGNCC	1 cut(s)	329
BmrFI	CCNGG	3 cut(s)	535, 569, 801
BmrI	ACTGGG	1 cut(s)	865
BmsI	GCATC	3 cut(s)	554, 627, 754
BmuI	ACTGGG	1 cut(s)	865
BpiI	GAAGAC	1 cut(s)	653
BpmI	CTGGAG	1 cut(s)	908
BpuMI	CCSGG	1 cut(s)	569
BsaAI	YACGTR	1 cut(s)	832
BsaBI	GATNNNNATC	2 cut(s)	714, 822
BsaJI	CCNNGG	1 cut(s)	1006
BsaWI	WCCGGW	1 cut(s)	596
BsaXI	ACNNNNNCTCC	1 cut(s)	31
Bsc4I	CCNNNNNNNGG	1 cut(s)	463
Bse1I	ACTGG	3 cut(s)	544, 621, 860
Bse8I	GATNNNNATC	2 cut(s)	714, 822
BseBI	CCWGG	2 cut(s)	535, 801
BseDI	CCNNGG	1 cut(s)	1006
BseGI	GGATG	3 cut(s)	247, 823, 1136
BseJI	GATNNNNATC	2 cut(s)	714, 822
BseLI	CCNNNNNNNGG	1 cut(s)	463
BseMII	CTCAG	1 cut(s)	894
BseNI	ACTGG	3 cut(s)	544, 621, 860
BseXI	GCAGC	3 cut(s)	181, 200, 203
BsgI	GTGCAG	2 cut(s)	87, 974
Bsh1236I	CGCG	1 cut(s)	950
BshFI	GGCC	2 cut(s)	330, 456
BsiHKCI	CYCGRG	1 cut(s)	1037
BsiSI	CCGG	2 cut(s)	568, 597
BslFI	GGGAC	1 cut(s)	956
BslI	CCNNNNNNNGG	1 cut(s)	463
BsmAI	GTCTC	3 cut(s)	884, 963, 1034
BsmFI	GGGAC	1 cut(s)	956
BsmI	GAATGC	1 cut(s)	870
BsnI	GGCC	2 cut(s)	330, 456
BsoBI	CYCGRG	1 cut(s)	1037
Bsp1286I	GDGCHC	1 cut(s)	411
Bsp143I	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
BspACI	CCGC	3 cut(s)	20, 186, 950
BspANI	GGCC	2 cut(s)	330, 456
BspCNI	CTCAG	1 cut(s)	893
BspFNI	CGCG	1 cut(s)	950
BspHI	TCATGA	1 cut(s)	895
BspMAI	CTGCAG	1 cut(s)	970
BspMI	ACCTGC	1 cut(s)	115
BspPI	GGATC	2 cut(s)	584, 710
BsrI	ACTGG	3 cut(s)	544, 621, 860
BssECI	CCNNGG	1 cut(s)	1006
BssMI	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
BssT1I	CCWWGG	1 cut(s)	1006
Bst2UI	CCWGG	2 cut(s)	535, 801
Bst4CI	ACNGT	2 cut(s)	487, 1072
BstAPI	GCANNNNNTGC	1 cut(s)	194
BstBAI	YACGTR	1 cut(s)	832
BstDEI	CTNAG	2 cut(s)	198, 880
BstF5I	GGATG	3 cut(s)	247, 823, 1136
BstFNI	CGCG	1 cut(s)	950
BstHHI	GCGC	1 cut(s)	950
BstKTI	GATC	6 cut(s)	317, 579, 606, 698, 718, 1024
BstMAI	GTCTC	3 cut(s)	884, 963, 1034
BstMBI	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
BstMWI	GCNNNNNNNGC	5 cut(s)	194, 283, 336, 453, 1101
BstNI	CCWGG	2 cut(s)	535, 801
BstSCI	CCNGG	3 cut(s)	533, 567, 799
BstSFI	CTRYAG	3 cut(s)	486, 789, 966
BstUI	CGCG	1 cut(s)	950
BstV1I	GCAGC	3 cut(s)	181, 200, 203
BstV2I	GAAGAC	1 cut(s)	653
BstX2I	RGATCY	3 cut(s)	576, 603, 695
BstYI	RGATCY	3 cut(s)	576, 603, 695
BsuRI	GGCC	2 cut(s)	330, 456
BtsCI	GGATG	3 cut(s)	247, 823, 1136
BtsIMutI	CAGTG	2 cut(s)	888, 1106
BveI	ACCTGC	1 cut(s)	115
CaiI	CAGNNNCTG	2 cut(s)	194, 961
CciI	TCATGA	1 cut(s)	895
CfoI	GCGC	1 cut(s)	950
Cfr13I	GGNCC	1 cut(s)	329
Csp6I	GTAC	1 cut(s)	1134
CspCI	CAANNNNNGTGG	2 cut(s)	198, 233
CviAII	CATG	6 cut(s)	34, 54, 643, 706, 839, 896
CviQI	GTAC	1 cut(s)	1134
DdeI	CTNAG	2 cut(s)	198, 880
DpnI	GATC	6 cut(s)	316, 578, 605, 697, 717, 1023
DpnII	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
EciI	GGCGGA	1 cut(s)	9
Eco130I	CCWWGG	1 cut(s)	1006
Eco147I	AGGCCT	1 cut(s)	456
Eco24I	GRGCYC	1 cut(s)	411
Eco32I	GATATC	1 cut(s)	178
Eco57I	CTGAAG	1 cut(s)	1130
Eco72I	CACGTG	1 cut(s)	832
Eco88I	CYCGRG	1 cut(s)	1037
EcoO109I	RGGNCCY	1 cut(s)	329
EcoRII	CCWGG	2 cut(s)	533, 799
EcoRV	GATATC	1 cut(s)	178
EcoT14I	CCWWGG	1 cut(s)	1006
EcoT38I	GRGCYC	1 cut(s)	411
ErhI	CCWWGG	1 cut(s)	1006
FaeI	CATG	6 cut(s)	37, 57, 646, 709, 842, 899
FaqI	GGGAC	1 cut(s)	956
FatI	CATG	6 cut(s)	33, 53, 642, 705, 838, 895
FauI	CCCGC	1 cut(s)	193
FauNDI	CATATG	1 cut(s)	319
FbaI	TGATCA	1 cut(s)	1021
Fnu4HI	GCNGC	3 cut(s)	189, 192, 195
FokI	GGATG	2 cut(s)	254, 830
FriOI	GRGCYC	1 cut(s)	411
Fsp4HI	GCNGC	3 cut(s)	189, 192, 195
FspBI	CTAG	4 cut(s)	458, 746, 768, 975
GlaI	GCGC	1 cut(s)	949
GluI	GCNGC	3 cut(s)	189, 192, 195
GsuI	CTGGAG	1 cut(s)	908
HaeIII	GGCC	2 cut(s)	330, 456
HapII	CCGG	2 cut(s)	568, 597
HhaI	GCGC	1 cut(s)	950
Hin1II	CATG	6 cut(s)	37, 57, 646, 709, 842, 899
Hin6I	GCGC	1 cut(s)	948
HinP1I	GCGC	1 cut(s)	948
HinfI	GANTC	4 cut(s)	227, 710, 892, 992
HpaII	CCGG	2 cut(s)	568, 597
HphI	GGTGA	1 cut(s)	1001
Hpy188I	TCNGA	3 cut(s)	715, 939, 963
Hpy188III	TCNNGA	6 cut(s)	159, 549, 584, 865, 896, 1039
HpyAV	CCTTC	2 cut(s)	513, 886
HpyCH4III	ACNGT	2 cut(s)	487, 1072
HpyCH4IV	ACGT	2 cut(s)	831, 914
HpyCH4V	TGCA	7 cut(s)	104, 481, 545, 640, 842, 955, 968
HpyF10VI	GCNNNNNNNGC	5 cut(s)	194, 283, 336, 453, 1101
HpyF3I	CTNAG	2 cut(s)	198, 880
HpySE526I	ACGT	2 cut(s)	831, 914
Hsp92II	CATG	6 cut(s)	37, 57, 646, 709, 842, 899
HspAI	GCGC	1 cut(s)	948
Ksp22I	TGATCA	1 cut(s)	1021
Kzo9I	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
LmnI	GCTCC	1 cut(s)	22
Lsp1109I	GCAGC	3 cut(s)	181, 200, 203
LweI	GCATC	3 cut(s)	554, 627, 754
MaeI	CTAG	4 cut(s)	458, 746, 768, 975
MaeII	ACGT	2 cut(s)	831, 914
MaeIII	GTNAC	2 cut(s)	667, 989
MalI	GATC	6 cut(s)	316, 578, 605, 697, 717, 1023
MboI	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
MboII	GAAGA	1 cut(s)	658
MflI	RGATCY	3 cut(s)	576, 603, 695
MhlI	GDGCHC	1 cut(s)	411
MlyI	GAGTC	2 cut(s)	886, 986
MmeI	TCCRAC	3 cut(s)	219, 785, 897
MnlI	CCTC	8 cut(s)	56, 225, 257, 446, 729, 933, 1046, 1053
MseI	TTAA	3 cut(s)	114, 608, 692
MspA1I	CMGCKG	1 cut(s)	194
MspI	CCGG	2 cut(s)	568, 597
MspR9I	CCNGG	3 cut(s)	535, 569, 801
Mva1269I	GAATGC	1 cut(s)	870
MvaI	CCWGG	2 cut(s)	535, 801
MvnI	CGCG	1 cut(s)	950
MwoI	GCNNNNNNNGC	5 cut(s)	194, 283, 336, 453, 1101
NciI	CCSGG	1 cut(s)	569
NdeI	CATATG	1 cut(s)	319
NdeII	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
NlaIII	CATG	6 cut(s)	37, 57, 646, 709, 842, 899
NmuCI	GTSAC	1 cut(s)	989
PaeR7I	CTCGAG	1 cut(s)	1037
PagI	TCATGA	1 cut(s)	895
PaqCI	CACCTGC	1 cut(s)	115
PceI	AGGCCT	1 cut(s)	456
PcsI	WCGNNNNNNNCGW	1 cut(s)	911
PctI	GAATGC	1 cut(s)	870
PfeI	GAWTC	2 cut(s)	227, 710
PflFI	GACNNNGTC	1 cut(s)	1045
PfoI	TCCNGGA	1 cut(s)	567
PkrI	GCNGC	3 cut(s)	190, 193, 196
PleI	GAGTC	2 cut(s)	886, 986
PmaCI	CACGTG	1 cut(s)	832
PmlI	CACGTG	1 cut(s)	832
PpsI	GAGTC	2 cut(s)	886, 986
Ppu21I	YACGTR	1 cut(s)	832
PshBI	ATTAAT	1 cut(s)	114
Psp6I	CCWGG	2 cut(s)	533, 799
PspCI	CACGTG	1 cut(s)	832
PspGI	CCWGG	2 cut(s)	533, 799
PspPI	GGNCC	1 cut(s)	329
PstI	CTGCAG	1 cut(s)	970
PstNI	CAGNNNCTG	2 cut(s)	194, 961
PsuI	RGATCY	3 cut(s)	576, 603, 695
PsyI	GACNNNGTC	1 cut(s)	1045
PvuII	CAGCTG	1 cut(s)	194
RsaI	GTAC	1 cut(s)	1135
RsaNI	GTAC	1 cut(s)	1134
SaqAI	TTAA	3 cut(s)	114, 608, 692
SatI	GCNGC	3 cut(s)	189, 192, 195
Sau3AI	GATC	6 cut(s)	314, 576, 603, 695, 715, 1021
Sau96I	GGNCC	1 cut(s)	329
SchI	GAGTC	2 cut(s)	886, 986
ScrFI	CCNGG	3 cut(s)	535, 569, 801
SduI	GDGCHC	1 cut(s)	411
SetI	ASST	8 cut(s)	109, 196, 536, 834, 903, 917, 991, 1139
SfaNI	GCATC	3 cut(s)	554, 627, 754
SfcI	CTRYAG	3 cut(s)	486, 789, 966
Sfr274I	CTCGAG	1 cut(s)	1037
SlaI	CTCGAG	1 cut(s)	1037
SmlI	CTYRAG	1 cut(s)	1037
SmoI	CTYRAG	1 cut(s)	1037
SseBI	AGGCCT	1 cut(s)	456
SsiI	CCGC	3 cut(s)	20, 186, 950
SspMI	CTAG	4 cut(s)	458, 746, 768, 975
StuI	AGGCCT	1 cut(s)	456
StyD4I	CCNGG	3 cut(s)	533, 567, 799
StyI	CCWWGG	1 cut(s)	1006
TaaI	ACNGT	2 cut(s)	487, 1072
TaiI	ACGT	2 cut(s)	834, 917
TaqI	TCGA	7 cut(s)	230, 431, 613, 864, 925, 1038, 1049
TfiI	GAWTC	2 cut(s)	227, 710
Tru1I	TTAA	3 cut(s)	114, 608, 692
Tru9I	TTAA	3 cut(s)	114, 608, 692
TscAI	CASTG	2 cut(s)	888, 1113
TseFI	GTSAC	1 cut(s)	989
TseI	GCWGC	3 cut(s)	188, 191, 194
Tsp45I	GTSAC	1 cut(s)	989
TspDTI	ATGAA	1 cut(s)	659
TspRI	CASTG	2 cut(s)	888, 1113
Tth111I	GACNNNGTC	1 cut(s)	1045
VspI	ATTAAT	1 cut(s)	114
XapI	RAATTY	1 cut(s)	656
XhoI	CTCGAG	1 cut(s)	1037
XspI	CTAG	4 cut(s)	458, 746, 768, 975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.