AT1G08720

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004456
Physical Location & Seq
Forward (+)
2773941 .. 2779308
5368 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08720.2

Sequence Viewer

Length: 2802 bp
ATGAAGCATATTTTCAAGAAGCTACACAGAGGTGGGAATCAAGAGCAGCAGAATCGAACCAACGATGCAGCTCCTCCATCGGATCAAAATCGGATTCACGTTTCTGCTAATCCTCCTCAAGCAACCCCTTCGTCAGTCACTGAGACGCTTCCGGTGGCCGGAGCTACTTCTTCTATGGCCTCTCCTGCTCCAACCGCTGCTTCGAACCGTGCGGATTACATGTCTTCTGAGGAGGAGTATCAAGTGCAGTTAGCCCTAGCGATCAGTGCTTCGAATTCGCAGTCCAGTGAGGATCCGGAGAAGCATCAGATCCGAGCGGCGACGCTTCTGAGCTTAGGAAGCCATCAACGGATGGATTCAAGGAGGGATTCATCGGAGGTGGTAGCCCAGAGGTTATCGAGACAGTACTGGGAATATGGCGTGCTTGACTATGAGGAGAAAGTTGTCGATAGTTTCTACGACGTATACAGTCTATCCACAGACTCCGCAAAGCAGGGAGAAATGCCATCGCTGGAAGATCTTGAAAGCAATCATGGCACACCTGGCTTTGAAGCTGTAGTTGTAAATCGACCTATTGATTCTTCCCTGCATGAGTTGCTAGAAATCGCAGAGTGTATTGCACTGGGTTGTTCTACTACCAGTGTTAGTGTGTTGGTACAGAGGCTGGCTGAGCTTGTCACCGAGCATATGGGTGGATCTGCGGAAGATTCCAGTATAGTATTGGCAAGGTGGACTGAAAAAAGCAGCGAGTTCAAGGCAGCATTGAATACTTGCGTATTCCCTATTGGATTTGTAAAGATTGGTATCTCAAGGCATCGTGCTCTGCTTTTCAAGGTTTTGGCAGATAGTGTCAGGTTACCTTGTAGGTTGGTAAAAGGTAGCCACTACACAGGCAATGAGGATGATGCTGTGAACACGATAAGACTGGAAGATGAAAGAGAGTACTTGGTTGATCTTATGACAGATCCTGGGACGCTTATACCCGCTGATTTTGCAAGTGCTAGTAATAACACCGTTGAGCCATGTAACTCAAATGGAAACAAATTTCCTACAGCTCAGTTTTCAAATGACGTGCCAAAGCTCTCAGAAGGTGAAGGAAGTAGTCACAGTTCTATGGCCAACTATAGTTCTTCTTTGGATAGAAGGACAGAGGCTGAAAGGACAGATTCTTCATACCCAAAGGTGGGACCACTTCGGAACATAGACTATAGTTCTCCTTCTAGCGTAACTAGTTCTACTCAGTTGGAGAACAATTCCTCAACAGCAATTGGAAAGGGGAGTCGAGGAGCCATAATTGAATGTTCAAGAACAAACATGAATATAGTTCCTTACAATCAGAACAGTGAGGAAGACCCAAAAAACCTTTTCGCAGACCTTAATCCATTTCAAAATAAGGGAGCTGACAAGCTGTATATGCCCACTAAATCAGGTTTGAATAACGTTGATGATTTTCATCAACAGAAAAATAATCCTCTGGTTGGTAGATCACCTGCGCCAATGATGTGGAAGAATTACAGTTGCAATGAAGCCCCAAAGAGAAAGGAGAATAGTTATATAGAAAATCTTCTCCCGAAACTCCACCGTGATCCTCGTTATGGAAACACTCAATCCTCATATGCTACCTCAAGCTCCAATGGAGCTATTTCCTCAAATGTGCATGGCAGAGACAATGTGACATTTGTGTCACCGGTTGCTGTACCATCATCCTTCACATCCACTGAAAATCAGTTTAGACCAAGTATAGTGGAGGATATGAACAGAAACACCAACAATGAACTAGATCTTCAGCCTCATACTGCTGCTGTGGTACATGGACAACAGAATGATGAATCTCACATCCATGATCACAGAAAGTACACAAGTGATGACATATCCACTGGCTGTGATCCGAGGCTTAAGGATCACGAAAGTACAAGTTCATCTCTTGATTCTACATCCTACCGGAATGATCCTCAAGTTCTTGATGATGCAGATGTTGGTGAATGTGAAATTCCTTGGAATGATCTCGTTATTGCGGAGAGAATAGGATTAGGGTCCTATGGAGAGGTCTATCATGCTGACTGGCATGGCACGGAAGTTGCTGTCAAGAAATTTTTGGACCAGGACTTCTCAGGTGCTGCTTTAGCCGAGTTCAGAAGCGAAGTACGGATTATGCGAAGATTGCGTCATCCAAATGTTGTATTCTTCCTTGGGGCTGTTACTCGTCCTCCAAATCTTTCCATCGTCACAGAGTTTCTGCCTAGAGGAAGCTTGTATCGAATCCTTCATCGGCCCAAATCTCACATTGACGAGCGGCGCCGGATTAAAATGGCCCTTGACGTGGCAATGGGGATGAACTGCTTACACACCAGTACACCGACAATTGTTCATCGTGATCTCAAAACACCAAACCTTTTGGTTGATAACAACTGGAATGTTAAGGTCGGTGATTTTGGGTTGTCTCGCTTAAAGCACAATACTTTTTTATCCTCCAAATCAACTGCTGGAACGCCTGAATGGATGGCTCCAGAAGTTCTACGCAATGAGCCCTCAAATGAAAAGTGTGATGTGTACAGTTTCGGGGTAATACTTTGGGAACTAGCAACATTGAGATTACCATGGAGAGGAATGAACCCAATGCAAGTAGTTGGAGCAGTTGGGTTCCAGAATCGGCGGCTTGAGATCCCCAAGGAACTTGATCCTGTGGTGGGAAGGATCATCCTGGAATGTTGGCAAACGGATCCGAATCTGCGGCCGTCATTTGCTCAGCTGACGGAAGTGCTGAAGCCTTTGAACCGGCTTGTACTTCCTACACCACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001666 GO:0001932 GO:0001934 GO:0002229 GO:0002239 GO:0002831 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005769 GO:0005783 GO:0005789 GO:0005794 GO:0005798 GO:0005802 GO:0005829 GO:0005886 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009787 GO:0009788 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010648 GO:0010817 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019752 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031982 GO:0031984 GO:0032101 GO:0032147 GO:0032268 GO:0032270 GO:0033674 GO:0034284 GO:0034285 GO:0035556 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042325 GO:0042327 GO:0042445 GO:0042446 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043436 GO:0043549 GO:0043900 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051246 GO:0051247 GO:0051302 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097708 GO:0098542 GO:0098588 GO:0098791 GO:0098805 GO:0098827 GO:0140096 GO:1900150 GO:1900424 GO:1901419 GO:1901420 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1902533 GO:1905957 GO:1905958 GO:2000026 GO:2000031 GO:2000035 GO:2000069 GO:2000280 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

933

Amino Acids

103.59

Weight (kDa)

5.69

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 129 - 327 6.4e-75 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 671 - 905 4.8e-57 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 672 - 874 5.4e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1498
AasI GACNNNNNNGTC 1 cut(s) 1681
Acc36I ACCTGC 1 cut(s) 1498
AccB1I GGYRCC 1 cut(s) 2295
AccBSI CCGCTC 2 cut(s) 317, 2293
AccI GTMKAC 1 cut(s) 465
AccIII TCCGGA 1 cut(s) 295
AclI AACGTT 1 cut(s) 1440
AcoI YGGCCR 3 cut(s) 156, 1116, 2732
AcsI RAATTY 4 cut(s) 274, 1043, 1989, 2090
AcuI CTGAAG 2 cut(s) 1769, 2783
AcyI GRCGYC 1 cut(s) 2296
AfiI CCNNNNNNNGG 8 cut(s) 158, 1183, 1184, 1478, 1595, 2320, 2603, 2687
AflII CTTAAG 1 cut(s) 1895
AflIII ACRYGT 1 cut(s) 219
AgeI ACCGGT 1 cut(s) 1687
AhlI ACTAGT 1 cut(s) 1229
AjiI CACGTC 2 cut(s) 1072, 2320
AjnI CCWGG 4 cut(s) 541, 967, 2100, 2700
AjuI GAANNNNNNNTTGG 2 cut(s) 184, 216
AleI CACNNNNGTG 1 cut(s) 30
Alw21I GWGCWC 1 cut(s) 823
Alw26I GTCTC 4 cut(s) 137, 394, 1659, 2445
AlwNI CAGNNNCTG 5 cut(s) 140, 664, 968, 1154, 2117
Aor13HI TCCGGA 1 cut(s) 295
AoxI GGCC 6 cut(s) 156, 177, 1116, 2270, 2310, 2732
ApeKI GCWGC 7 cut(s) 46, 68, 197, 744, 758, 1799, 2117
ApoI RAATTY 4 cut(s) 274, 1043, 1989, 2090
ArsI GACNNNNNNTTYG 4 cut(s) 266, 298, 2149, 2181
AsiGI ACCGGT 1 cut(s) 1687
Asp700I GAANNNNTTC 1 cut(s) 1563
AspLEI GCGC 2 cut(s) 1495, 2298
AspS9I GGNCC 5 cut(s) 1187, 2034, 2098, 2271, 2311
AsuHPI GGTGA 6 cut(s) 670, 1103, 1479, 1677, 1991, 2438
AsuII TTCGAA 2 cut(s) 203, 272
AvaII GGWCC 3 cut(s) 1187, 2034, 2098
BalI TGGCCA 1 cut(s) 1118
BamHI GGATCC 2 cut(s) 292, 2719
BanI GGYRCC 1 cut(s) 2295
BanII GRGCYC 1 cut(s) 2529
BbsI GAAGAC 2 cut(s) 216, 1356
Bbv12I GWGCWC 1 cut(s) 823
BbvI GCAGC 7 cut(s) 58, 80, 184, 756, 770, 1786, 2104
BccI CCATC 7 cut(s) 85, 346, 351, 514, 1708, 2228, 2494
BceAI ACGGC 1 cut(s) 2719
BcgI CGANNNNNNTGC 4 cut(s) 35, 69, 111, 145
BciT130I CCWGG 4 cut(s) 543, 969, 2102, 2702
BclI TGATCA 1 cut(s) 1843
BcoDI GTCTC 4 cut(s) 137, 394, 1659, 2445
BcuI ACTAGT 1 cut(s) 1229
BfaI CTAG 8 cut(s) 257, 599, 1002, 1221, 1230, 1778, 2241, 2579
BfmI CTRYAG 4 cut(s) 555, 1050, 1123, 1207
BfoI RGCGCY 1 cut(s) 2299
BfrI CTTAAG 1 cut(s) 1895
BfuAI ACCTGC 1 cut(s) 1498
BglII AGATCT 2 cut(s) 517, 1780
BlpI GCTNAGC 2 cut(s) 669, 2745
BmcAI AGTACT 2 cut(s) 407, 944
Bme1390I CCNGG 4 cut(s) 543, 969, 2102, 2702
Bme18I GGWCC 3 cut(s) 1187, 2034, 2098
BmgBI CACGTC 2 cut(s) 1072, 2320
BmgT120I GGNCC 5 cut(s) 1187, 2034, 2098, 2271, 2311
BmiI GGNNCC 8 cut(s) 294, 1188, 1288, 2035, 2297, 2505, 2642, 2721
BmrFI CCNGG 4 cut(s) 543, 969, 2102, 2702
BmrI ACTGGG 2 cut(s) 418, 632
BmsI GCATC 5 cut(s) 55, 313, 823, 895, 1957
BmuI ACTGGG 2 cut(s) 418, 632
BpiI GAAGAC 2 cut(s) 216, 1356
BpmI CTGGAG 1 cut(s) 2490
Bpu10I CCTNAGC 1 cut(s) 334
Bpu1102I GCTNAGC 2 cut(s) 669, 2745
Bpu14I TTCGAA 2 cut(s) 203, 272
BpuEI CTTGAG 5 cut(s) 102, 793, 1609, 1938, 2678
BsaBI GATNNNNATC 4 cut(s) 87, 803, 1452, 2724
BsaHI GRCGYC 1 cut(s) 2296
BsaJI CCNNGG 6 cut(s) 968, 1889, 1994, 2188, 2597, 2667
BsaWI WCCGGW 4 cut(s) 151, 295, 1687, 1941
BsaXI ACNNNNNCTCC 2 cut(s) 2191, 2221
Bsc4I CCNNNNNNNGG 8 cut(s) 158, 1183, 1184, 1478, 1595, 2320, 2603, 2687
Bse118I RCCGGY 2 cut(s) 1687, 2775
Bse3DI GCAATG 4 cut(s) 901, 1528, 2331, 2527
Bse8I GATNNNNATC 4 cut(s) 87, 803, 1452, 2724
BseAI TCCGGA 1 cut(s) 295
BseBI CCWGG 4 cut(s) 543, 969, 2102, 2702
BseDI CCNNGG 6 cut(s) 968, 1889, 1994, 2188, 2597, 2667
BseJI GATNNNNATC 4 cut(s) 87, 803, 1452, 2724
BseLI CCNNNNNNNGG 8 cut(s) 158, 1183, 1184, 1478, 1595, 2320, 2603, 2687
BseMI GCAATG 4 cut(s) 901, 1528, 2331, 2527
BseMII CTCAG 9 cut(s) 132, 219, 320, 660, 1070, 1098, 1253, 2124, 2759
BseRI GAGGAG 6 cut(s) 63, 105, 245, 248, 449, 1299
BseX3I CGGCCG 1 cut(s) 2732
BseXI GCAGC 7 cut(s) 58, 80, 184, 756, 770, 1786, 2104
BsgI GTGCAG 1 cut(s) 266
Bsh1285I CGRYCG 1 cut(s) 2735
BshFI GGCC 6 cut(s) 158, 179, 1118, 2272, 2312, 2734
BshNI GGYRCC 1 cut(s) 2295
BshTI ACCGGT 1 cut(s) 1687
BsiEI CGRYCG 1 cut(s) 2735
BsiHKAI GWGCWC 1 cut(s) 823
BsiSI CCGG 7 cut(s) 152, 159, 296, 1688, 1942, 2299, 2776
BslFI GGGAC 2 cut(s) 985, 1200
BslI CCNNNNNNNGG 8 cut(s) 158, 1183, 1184, 1478, 1595, 2320, 2603, 2687
BsmAI GTCTC 4 cut(s) 137, 394, 1659, 2445
BsmBI CGTCTC 1 cut(s) 137
BsmFI GGGAC 2 cut(s) 985, 1200
BsnI GGCC 6 cut(s) 158, 179, 1118, 2272, 2312, 2734
Bsp119I TTCGAA 2 cut(s) 203, 272
Bsp1286I GDGCHC 2 cut(s) 823, 2529
Bsp13I TCCGGA 1 cut(s) 295
Bsp1407I TGTACA 1 cut(s) 2550
Bsp1720I GCTNAGC 2 cut(s) 669, 2745
Bsp19I CCATGG 1 cut(s) 2597
BspANI GGCC 6 cut(s) 158, 179, 1118, 2272, 2312, 2734
BspCNI CTCAG 9 cut(s) 133, 220, 321, 661, 1069, 1097, 1252, 2123, 2758
BspEI TCCGGA 1 cut(s) 295
BspLI GGNNCC 8 cut(s) 294, 1188, 1288, 2035, 2297, 2505, 2642, 2721
BspMI ACCTGC 1 cut(s) 1498
BspT104I TTCGAA 2 cut(s) 203, 272
BspT107I GGYRCC 1 cut(s) 2295
BspTI CTTAAG 1 cut(s) 1895
BsrBI CCGCTC 2 cut(s) 317, 2293
BsrDI GCAATG 4 cut(s) 901, 1528, 2331, 2527
BsrFI RCCGGY 2 cut(s) 1687, 2775
BsrGI TGTACA 1 cut(s) 2550
BssAI RCCGGY 2 cut(s) 1687, 2775
BssECI CCNNGG 6 cut(s) 968, 1889, 1994, 2188, 2597, 2667
BssNAI GTATAC 1 cut(s) 466
BssNI GRCGYC 1 cut(s) 2296
BssT1I CCWWGG 4 cut(s) 1994, 2188, 2597, 2667
Bst1107I GTATAC 1 cut(s) 466
Bst2UI CCWGG 4 cut(s) 543, 969, 2102, 2702
Bst4CI ACNGT 9 cut(s) 209, 405, 470, 1015, 1109, 1343, 1517, 1583, 2555
BstACI GRCGYC 1 cut(s) 2296
BstAFI CTTAAG 1 cut(s) 1895
BstAPI GCANNNNNTGC 1 cut(s) 595
BstAUI TGTACA 1 cut(s) 2550
BstBI TTCGAA 2 cut(s) 203, 272
BstC8I GCNNGC 2 cut(s) 422, 666
BstDSI CCRYGG 1 cut(s) 2597
BstEII GGTNACC 1 cut(s) 855
BstH2I RGCGCY 1 cut(s) 2299
BstHHI GCGC 2 cut(s) 1495, 2298
BstMAI GTCTC 4 cut(s) 137, 394, 1659, 2445
BstMCI CGRYCG 1 cut(s) 2735
BstNI CCWGG 4 cut(s) 543, 969, 2102, 2702
BstNSI RCATGY 1 cut(s) 223
BstPI GGTNACC 1 cut(s) 855
BstSCI CCNGG 4 cut(s) 541, 967, 2100, 2700
BstSFI CTRYAG 4 cut(s) 555, 1050, 1123, 1207
BstV1I GCAGC 7 cut(s) 58, 80, 184, 756, 770, 1786, 2104
BstV2I GAAGAC 2 cut(s) 216, 1356
BstX2I RGATCY 8 cut(s) 292, 309, 517, 695, 964, 1780, 2661, 2719
BstXI CCANNNNNNTGG 1 cut(s) 1503
BstYI RGATCY 8 cut(s) 292, 309, 517, 695, 964, 1780, 2661, 2719
BstZ17I GTATAC 1 cut(s) 466
BstZI CGGCCG 1 cut(s) 2732
BsuRI GGCC 6 cut(s) 158, 179, 1118, 2272, 2312, 2734
BtgI CCRYGG 1 cut(s) 2597
BtgZI GCGATG 1 cut(s) 492
BtrI CACGTC 2 cut(s) 1072, 2320
BtsIMutI CAGTG 8 cut(s) 138, 271, 292, 620, 646, 1348, 1716, 1875
BveI ACCTGC 1 cut(s) 1498
Cac8I GCNNGC 2 cut(s) 422, 666
CaiI CAGNNNCTG 5 cut(s) 140, 664, 968, 1154, 2117
CfoI GCGC 2 cut(s) 1495, 2298
Cfr10I RCCGGY 2 cut(s) 1687, 2775
Cfr13I GGNCC 5 cut(s) 1187, 2034, 2098, 2271, 2311
CseI GACGC 4 cut(s) 154, 331, 982, 2153
CspAI ACCGGT 1 cut(s) 1687
CspCI CAANNNNNGTGG 2 cut(s) 1725, 1760
DinI GGCGCC 1 cut(s) 2297
DrdI GACNNNNNNGTC 1 cut(s) 1681
DseDI GACNNNNNNGTC 1 cut(s) 1681
EaeI YGGCCR 3 cut(s) 156, 1116, 2732
EagI CGGCCG 1 cut(s) 2732
EclXI CGGCCG 1 cut(s) 2732
Eco130I CCWWGG 4 cut(s) 1994, 2188, 2597, 2667
Eco24I GRGCYC 1 cut(s) 2529
Eco47I GGWCC 3 cut(s) 1187, 2034, 2098
Eco52I CGGCCG 1 cut(s) 2732
Eco57I CTGAAG 2 cut(s) 1769, 2783
Eco91I GGTNACC 1 cut(s) 855
EcoO109I RGGNCCY 1 cut(s) 2034
EcoO65I GGTNACC 1 cut(s) 855
EcoRI GAATTC 1 cut(s) 274
EcoRII CCWGG 4 cut(s) 541, 967, 2100, 2700
EcoT14I CCWWGG 4 cut(s) 1994, 2188, 2597, 2667
EcoT38I GRGCYC 1 cut(s) 2529
EgeI GGCGCC 1 cut(s) 2297
EheI GGCGCC 1 cut(s) 2297
ErhI CCWWGG 4 cut(s) 1994, 2188, 2597, 2667
Esp3I CGTCTC 1 cut(s) 137
FaqI GGGAC 2 cut(s) 985, 1200
FauI CCCGC 1 cut(s) 991
FauNDI CATATG 2 cut(s) 687, 1615
FbaI TGATCA 1 cut(s) 1843
FblI GTMKAC 1 cut(s) 465
FriOI GRGCYC 1 cut(s) 2529
FspBI CTAG 8 cut(s) 257, 599, 1002, 1221, 1230, 1778, 2241, 2579
GlaI GCGC 2 cut(s) 1494, 2297
GsuI CTGGAG 1 cut(s) 2490
HaeII RGCGCY 1 cut(s) 2299
HaeIII GGCC 6 cut(s) 158, 179, 1118, 2272, 2312, 2734
HapII CCGG 7 cut(s) 152, 159, 296, 1688, 1942, 2299, 2776
HgaI GACGC 4 cut(s) 154, 331, 982, 2153
HhaI GCGC 2 cut(s) 1495, 2298
Hin1I GRCGYC 1 cut(s) 2296
Hin6I GCGC 2 cut(s) 1493, 2296
HinP1I GCGC 2 cut(s) 1493, 2296
HindIII AAGCTT 1 cut(s) 2248
HpaII CCGG 7 cut(s) 152, 159, 296, 1688, 1942, 2299, 2776
HphI GGTGA 6 cut(s) 670, 1103, 1479, 1677, 1991, 2438
Hpy166II GTNNAC 6 cut(s) 466, 732, 913, 1857, 2354, 2551
Hpy8I GTNNAC 6 cut(s) 466, 732, 913, 1857, 2354, 2551
Hpy99I CGWCG 2 cut(s) 325, 464
HpyAV CCTTC 8 cut(s) 138, 1082, 1088, 1137, 1227, 1717, 2273, 2685
HpyCH4III ACNGT 9 cut(s) 209, 405, 470, 1015, 1109, 1343, 1517, 1583, 2555
HpyCH4IV ACGT 5 cut(s) 99, 462, 1071, 1440, 2319
HpyCH4V TGCA 9 cut(s) 68, 247, 589, 620, 995, 1521, 1657, 1970, 2620
HpySE526I ACGT 5 cut(s) 99, 462, 1071, 1440, 2319
Hsp92I GRCGYC 1 cut(s) 2296
HspAI GCGC 2 cut(s) 1493, 2296
KasI GGCGCC 1 cut(s) 2295
Kpn2I TCCGGA 1 cut(s) 295
Ksp22I TGATCA 1 cut(s) 1843
LmnI GCTCC 9 cut(s) 76, 161, 193, 1286, 1397, 1634, 1637, 2509, 2630
Lsp1109I GCAGC 7 cut(s) 58, 80, 184, 756, 770, 1786, 2104
LweI GCATC 5 cut(s) 55, 313, 823, 895, 1957
MaeI CTAG 8 cut(s) 257, 599, 1002, 1221, 1230, 1778, 2241, 2579
MaeII ACGT 5 cut(s) 99, 462, 1071, 1440, 2319
MbiI CCGCTC 2 cut(s) 317, 2293
MfeI CAATTG 2 cut(s) 1266, 2361
MflI RGATCY 8 cut(s) 292, 309, 517, 695, 964, 1780, 2661, 2719
MhlI GDGCHC 2 cut(s) 823, 2529
MlsI TGGCCA 1 cut(s) 1118
MluCI AATT 9 cut(s) 274, 1043, 1252, 1266, 1293, 1510, 1989, 2090, 2361
MluNI TGGCCA 1 cut(s) 1118
Mly113I GGCGCC 1 cut(s) 2296
MlyI GAGTC 2 cut(s) 476, 1288
MmeI TCCRAC 3 cut(s) 215, 1224, 2608
Mox20I TGGCCA 1 cut(s) 1118
MroI TCCGGA 1 cut(s) 295
MroXI GAANNNNTTC 1 cut(s) 1563
MscI TGGCCA 1 cut(s) 1118
MseI TTAA 5 cut(s) 1377, 1896, 2304, 2418, 2447
MslI CAYNNNNRTG 4 cut(s) 30, 690, 1839, 2172
Msp20I TGGCCA 1 cut(s) 1118
MspA1I CMGCKG 3 cut(s) 197, 986, 2749
MspCI CTTAAG 1 cut(s) 1895
MspI CCGG 7 cut(s) 152, 159, 296, 1688, 1942, 2299, 2776
MspR9I CCNGG 4 cut(s) 543, 969, 2102, 2702
MunI CAATTG 2 cut(s) 1266, 2361
MvaI CCWGG 4 cut(s) 543, 969, 2102, 2702
NarI GGCGCC 1 cut(s) 2296
NcoI CCATGG 1 cut(s) 2597
NdeI CATATG 2 cut(s) 687, 1615
NlaIV GGNNCC 8 cut(s) 294, 1188, 1288, 2035, 2297, 2505, 2642, 2721
NmeAIII GCCGAG 1 cut(s) 2152
NmuCI GTSAC 6 cut(s) 136, 676, 1103, 1672, 1683, 2224
NspI RCATGY 1 cut(s) 223
NspV TTCGAA 2 cut(s) 203, 272
OliI CACNNNNGTG 1 cut(s) 30
PaqCI CACCTGC 1 cut(s) 1498
PciI ACATGT 1 cut(s) 219
PcsI WCGNNNNNNNCGW 1 cut(s) 2152
PdmI GAANNNNTTC 1 cut(s) 1563
PfoI TCCNGGA 1 cut(s) 2700
PinAI ACCGGT 1 cut(s) 1687
PleI GAGTC 2 cut(s) 476, 1287
PluTI GGCGCC 1 cut(s) 2299
PpsI GAGTC 2 cut(s) 476, 1287
PpuMI RGGWCCY 1 cut(s) 2034
PscI ACATGT 1 cut(s) 219
Psp1406I AACGTT 1 cut(s) 1440
Psp5II RGGWCCY 1 cut(s) 2034
Psp6I CCWGG 4 cut(s) 541, 967, 2100, 2700
PspEI GGTNACC 1 cut(s) 855
PspGI CCWGG 4 cut(s) 541, 967, 2100, 2700
PspN4I GGNNCC 8 cut(s) 294, 1188, 1288, 2035, 2297, 2505, 2642, 2721
PspPI GGNCC 5 cut(s) 1187, 2034, 2098, 2271, 2311
PspPPI RGGWCCY 1 cut(s) 2034
PsrI GAACNNNNNNTAC 2 cut(s) 1093, 1125
PstNI CAGNNNCTG 5 cut(s) 140, 664, 968, 1154, 2117
PsuI RGATCY 8 cut(s) 292, 309, 517, 695, 964, 1780, 2661, 2719
PvuII CAGCTG 1 cut(s) 2749
RseI CAYNNNNRTG 4 cut(s) 30, 690, 1839, 2172
SaqAI TTAA 5 cut(s) 1377, 1896, 2304, 2418, 2447
Sau96I GGNCC 5 cut(s) 1187, 2034, 2098, 2271, 2311
ScaI AGTACT 2 cut(s) 407, 944
SchI GAGTC 2 cut(s) 476, 1288
ScrFI CCNGG 4 cut(s) 543, 969, 2102, 2702
SduI GDGCHC 2 cut(s) 823, 2529
SfaNI GCATC 5 cut(s) 55, 313, 823, 895, 1957
SfcI CTRYAG 4 cut(s) 555, 1050, 1123, 1207
SfoI GGCGCC 1 cut(s) 2297
SfuI TTCGAA 2 cut(s) 203, 272
SinI GGWCC 3 cut(s) 1187, 2034, 2098
SmiMI CAYNNNNRTG 4 cut(s) 30, 690, 1839, 2172
SmlI CTYRAG 6 cut(s) 117, 808, 1624, 1895, 1953, 2657
SmoI CTYRAG 6 cut(s) 117, 808, 1624, 1895, 1953, 2657
SpeI ACTAGT 1 cut(s) 1229
Sse9I AATT 9 cut(s) 274, 1043, 1252, 1266, 1293, 1510, 1989, 2090, 2361
SspDI GGCGCC 1 cut(s) 2295
SspMI CTAG 8 cut(s) 257, 599, 1002, 1221, 1230, 1778, 2241, 2579
StyD4I CCNGG 4 cut(s) 541, 967, 2100, 2700
StyI CCWWGG 4 cut(s) 1994, 2188, 2597, 2667
TaaI ACNGT 9 cut(s) 209, 405, 470, 1015, 1109, 1343, 1517, 1583, 2555
TaiI ACGT 5 cut(s) 102, 465, 1074, 1443, 2322
TaqI TCGA 8 cut(s) 55, 203, 272, 398, 447, 568, 1282, 2257
TasI AATT 9 cut(s) 274, 1043, 1252, 1266, 1293, 1510, 1989, 2090, 2361
TatI WGTACW 7 cut(s) 405, 942, 1854, 1910, 2351, 2550, 2782
TauI GCSGC 4 cut(s) 320, 2296, 2656, 2734
Tru1I TTAA 5 cut(s) 1377, 1896, 2304, 2418, 2447
Tru9I TTAA 5 cut(s) 1377, 1896, 2304, 2418, 2447
TscAI CASTG 8 cut(s) 145, 271, 292, 627, 646, 1348, 1723, 1882
TseFI GTSAC 6 cut(s) 136, 676, 1103, 1672, 1683, 2224
TseI GCWGC 7 cut(s) 46, 68, 197, 744, 758, 1799, 2117
Tsp45I GTSAC 6 cut(s) 136, 676, 1103, 1672, 1683, 2224
TspGWI ACGGA 5 cut(s) 364, 2087, 2161, 2732, 2768
TspRI CASTG 8 cut(s) 145, 271, 292, 627, 646, 1348, 1723, 1882
Vha464I CTTAAG 1 cut(s) 1895
VpaK11BI GGWCC 3 cut(s) 1187, 2034, 2098
XapI RAATTY 4 cut(s) 274, 1043, 1989, 2090
XceI RCATGY 1 cut(s) 223
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XmiI GTMKAC 1 cut(s) 465
XmnI GAANNNNTTC 1 cut(s) 1563
XspI CTAG 8 cut(s) 257, 599, 1002, 1221, 1230, 1778, 2241, 2579
ZrmI AGTACT 2 cut(s) 407, 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.