FvH4_6g03880

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0004456
Physical Location & Seq
Forward (+)
2084196 .. 2091160
6965 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g03880.t6

Sequence Viewer

Length: 2736 bp
ATGAAACACATTTTCAAGAAGCTTCACATAGGGAGCAACCACGACCCGGCCCGATCGAACGACGCGGCACCATCAGCGTCGACCTCAGCCGTGACGTCACCTTCATGCGCCTCCGATCATCGCCAGAGCGCCGGAAACGCGCCCCCGGCGAGTCCTTTTGCTTCGTCGTCGGCGTCGCCGGCAGGTGCGGGAGCGGCGAACGGAGGCGCGGCGGGTTCGGAGCCTGCGACGACGGCGGGGAACCGGCCGGATTACATGTTGTCGGAGGAGGAGTTTCAGGTTCAGCTGGCGCTGGCGATCAGTGCTTCGAATTCGGATGCTCGCGATGATCCGGAGAATGATCAGATCCGCGCGGCGACGATGCTGAGCTTGGGCGGCGGCGGGGGTGATCAGACGGGGGATGAGGCGGAGGCGGCCGCGGCGGAGACGTTGTCGAGGCACTATTGGGAATACAATGTGCTAGACTACGAGGAAAAAGTGGTTGATGGGTTTTATGATGTATTTGGAATTTCCACGGATTCTGCAGTACAAGGGAAAATGCCTTCCCTTACCAATATAGAAAAAACCCTTGGGAGATCTGGATTTGAAGTTTCATTAGTAAATCGAACAATTGATCCTTCCTTGGAAGAGTTGGTGCAAATTGCACAGTGTATTGCGGTAGACTGCCCTATCACCGATGTCGGAATTTTGGTACAGAGGCTTGCTGAACTCGTTAGCGGACATATGGGCGGGCCTGTAAAGGATGCTAATATCATCTTGGCGAGGTGGATGGAAAGAAGTTCAGAGTTGAGGACATCTCTGCAAACAAGTGTACTGCCTATTGGGTCCATTACCATTGGCCTCTCCCGACACCGTGCTTTACTTTTCAAGGTATTAGCTGACAGTATCAAGATGCCGTGCAGACTGCTTAAGGGTGTGCACTATACTGGTGTTGAGGATGGTGCTGTTAATGTAGTAAAGTTGGAGGATGACAGGGAATTTATGGTGGATCTTATGGCTGATCCTGGAACACTCATACCAGCTGACATTTCAAATGCAATGGACACTACCTTAAAGCCAAGCAATCCGAAATTGAACACAATCCCAACTTTCCCTTCTTTGATTGATACTGACGTTGTGTACTCAGGACGAAAGACATTGCATGGAGAGGGAAGCAGCCAAAACTCGGAAAGTTCTGAGAAAGCAGAATCATTCTGGGGTGCAATTGGCAACACAGGAGTTGGTTCTTCTGGAATACCCAAGAGAGCAACTCAATTAGATCATCTTCCCACATCAGCTTTTGAAACTTCTCGGTACCGAGGGAACCGTGGGGCTCATGCAGTTGATGGTGTGAGGACGAATATAAATGTAGTTCCATATGCTCAAAATAACTTGGAGGACTCTAACAGTCTTTTTGCAGAATTTAATCCTTTCCAAATAAAAGGAACTGGGAAAGCTCCTATGTATAACAAACCTTTGGAGAATAAGGCCGATGAGCTTCAGAGACCAAGAAATAATCTTGCCTCGTACACAAAAAATGTTCGTGCACACAATGAAGTCCCTAAAAAGAAGGAGTATGATTATTTGGATGGAATTATCCCAAGAGTTAATCGAGAACCCAATGGTCATAATCCGTCATCTTCAGCATCTACCAGCTCCACTAAATCTGATCAGATCAATGCTGGTGGTTTCAAATCAACTGCTCATTCAAATATGTCTGATTATTCACAAAGTGGCTCGGCAGAACGTGAGAATAATGTGAATGGCTTCCATGATCGAAGAAAGTTCACGCATGAAAGATTCATGGAGACCAATCCCAAACTGAAGGATCCAGAAAGTTGCAACTCATCCTTTGATTCCATTTCAAGTAGGGTTGAGCAAGTATTTGATGATGTTGATGTAAGTGAAAGTGAGATTCCATGGGAAGACCTGGTTATTGGAGAAAGAATTGGACTAGGTTCATATGGAGAAGTGTATCACGCTGACTGGAATGGCACGGAAGTTGCTGTGAAGAAGTTCCTAGACCAGGATTTCTCGGGTGCTGCTTTGGCTGAGTTTAAAAGAGAAGTACGGATAATGCGTAGGCTGCGCCATCCTAATGTTGTGCTTTTTATGGGGGCTATTACACGTCCTCCTAACCTCTCTATCATTACCGAGTTCCTTCCAAGGGGAAGTCTATATCGGATTATCCATCGTCCACATTGTCAAATTGAAGAGAGACGAAGATTAAAGATGGCTCTTGATGTGGCAAGGGGTATGAATTGCTTGCATTCGAGCAACCCGACTATTGTTCACCGGGATTTGAAGTCTCCAAATTTATTGGTTGATAAGAACTGGAATGTGAAGGTAGGTGATTTTGGGCTGTCGCGCTTGAAACATAACACTTTCTTGTCCTCAAAATCAACTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTTTTGCGCAACGAAAACTCAAATGAAAAGTGTGATGTATATAGCTTTGGAGTAATTTTGTGGGAGCTTGCTACTCTAAAGTTGCCTTGGAGTGGGATGAACCCTATGCAAGTTGTGGGTGCAGTGGGTTTCCAGAATCGCCGCCTTGATATCCCTAAAGAAGTTGATCCCCCTGTTGCAAGGATAATTTGGCAATGCTGGCAGACTGACCCAAACTTGCGCCCCTCGTTTTCAGAGCTCACGGTAGCTCTCAAGCCCTTGCAGCGGCTTGTCACTCCATCAAATATGGACCAGCCCAGCTCACCTCTACGACAAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0002229 GO:0002239 GO:0002831 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005769 GO:0005783 GO:0005794 GO:0005798 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009787 GO:0009788 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010648 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031982 GO:0031984 GO:0032101 GO:0032147 GO:0032268 GO:0032270 GO:0033674 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043900 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097708 GO:0098542 GO:0098588 GO:0098791 GO:0098805 GO:0140096 GO:1900150 GO:1900424 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1902531 GO:1902533 GO:1905957 GO:1905958 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

912

Amino Acids

99.77

Weight (kDa)

5.91

Isoelectric Point (pI)

44.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 141 - 339 1.3e-74 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 638 - 813 2.3e-40 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 639 - 812 7.2e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 173
AatII GACGTC 1 cut(s) 98
Acc16I TGCGCA 1 cut(s) 2423
Acc36I ACCTGC 1 cut(s) 173
Acc65I GGTACC 1 cut(s) 1293
AccB1I GGYRCC 3 cut(s) 67, 1293, 2407
AccBSI CCGCTC 1 cut(s) 194
AccI GTMKAC 2 cut(s) 80, 660
AccII CGCG 8 cut(s) 65, 140, 209, 324, 351, 353, 419, 2347
AccIII TCCGGA 1 cut(s) 331
AclWI GGATC 8 cut(s) 323, 340, 608, 995, 996, 1802, 1815, 2576
AcoI YGGCCR 2 cut(s) 245, 414
AcsI RAATTY 6 cut(s) 310, 507, 684, 977, 1400, 2293
AcuI CTGAAG 3 cut(s) 1463, 1605, 1823
AcyI GRCGYC 2 cut(s) 95, 173
AdeI CACNNNGTG 1 cut(s) 1712
AfaI GTAC 7 cut(s) 528, 693, 813, 1121, 1295, 1508, 2049
AfiI CCNNNNNNNGG 6 cut(s) 46, 1165, 2005, 2146, 2507, 2679
AflII CTTAAG 1 cut(s) 908
AflIII ACRYGT 2 cut(s) 255, 2105
AjiI CACGTC 1 cut(s) 2108
AjnI CCWGG 3 cut(s) 1003, 1908, 2004
AjuI GAANNNNNNNTTGG 4 cut(s) 552, 584, 1078, 1110
AloI GAACNNNNNNTCC 2 cut(s) 598, 630
Alw21I GWGCWC 3 cut(s) 921, 1528, 2655
Alw26I GTCTC 5 cut(s) 419, 1477, 1781, 2191, 2292
Alw44I GTGCAC 2 cut(s) 917, 1524
AlwI GGATC 8 cut(s) 323, 340, 608, 995, 996, 1802, 1815, 2576
Ama87I CYCGRG 1 cut(s) 2014
Aor13HI TCCGGA 1 cut(s) 331
AoxI GGCC 6 cut(s) 48, 245, 414, 731, 838, 1467
ApaLI GTGCAC 2 cut(s) 917, 1524
ApeKI GCWGC 4 cut(s) 1155, 2021, 2065, 2677
ApoI RAATTY 6 cut(s) 310, 507, 684, 977, 1400, 2293
Asp700I GAANNNNTTC 2 cut(s) 1745, 1994
Asp718I GGTACC 1 cut(s) 1293
AspS9I GGNCC 4 cut(s) 49, 731, 825, 2704
AsuC2I CCSGG 3 cut(s) 47, 146, 2276
AsuHPI GGTGA 6 cut(s) 90, 398, 664, 2264, 2342, 2709
AsuII TTCGAA 1 cut(s) 308
AvaI CYCGRG 1 cut(s) 2014
AvaII GGWCC 2 cut(s) 825, 2704
BaeGI GKGCMC 2 cut(s) 921, 1528
BaeI ACNNNNGTAYC 2 cut(s) 1098, 1131
BamHI GGATCC 1 cut(s) 1807
BanI GGYRCC 3 cut(s) 67, 1293, 2407
BanII GRGCYC 2 cut(s) 1315, 2655
BbsI GAAGAC 1 cut(s) 1911
Bbv12I GWGCWC 3 cut(s) 921, 1528, 2655
BbvCI CCTCAGC 1 cut(s) 85
BbvI GCAGC 4 cut(s) 1167, 2008, 2052, 2689
BceAI ACGGC 3 cut(s) 74, 249, 880
BciT130I CCWGG 3 cut(s) 1005, 1910, 2006
BclI TGATCA 3 cut(s) 340, 388, 1648
BcnI CCSGG 3 cut(s) 47, 146, 2276
BcoDI GTCTC 5 cut(s) 419, 1477, 1781, 2191, 2292
BfaI CTAG 3 cut(s) 461, 1934, 2000
BfmI CTRYAG 1 cut(s) 522
BfoI RGCGCY 2 cut(s) 132, 293
BfrI CTTAAG 1 cut(s) 908
BfuAI ACCTGC 1 cut(s) 173
BglII AGATCT 1 cut(s) 575
BlpI GCTNAGC 1 cut(s) 365
Bme1390I CCNGG 6 cut(s) 47, 146, 1005, 1910, 2006, 2276
Bme18I GGWCC 2 cut(s) 825, 2704
BmeT110I CYCGRG 1 cut(s) 2014
BmgBI CACGTC 1 cut(s) 2108
BmgT120I GGNCC 4 cut(s) 49, 731, 825, 2704
BmiI GGNNCC 8 cut(s) 69, 222, 242, 826, 1295, 1304, 1809, 2409
BmrFI CCNGG 6 cut(s) 47, 146, 1005, 1910, 2006, 2276
BmrI ACTGGG 1 cut(s) 1437
BmsI GCATC 5 cut(s) 307, 351, 733, 882, 1634
BmuI ACTGGG 1 cut(s) 1437
BpiI GAAGAC 1 cut(s) 1911
BplI GAGNNNNNCTC 4 cut(s) 781, 813, 1234, 1266
Bpu10I CCTNAGC 1 cut(s) 85
Bpu1102I GCTNAGC 1 cut(s) 365
Bpu14I TTCGAA 1 cut(s) 308
BpuEI CTTGAG 1 cut(s) 2651
BpuMI CCSGG 3 cut(s) 47, 146, 2276
BsaHI GRCGYC 2 cut(s) 95, 173
BsaI GGTCTC 2 cut(s) 1477, 1781
BsaWI WCCGGW 1 cut(s) 331
BsaXI ACNNNNNCTCC 6 cut(s) 257, 287, 416, 446, 2095, 2125
Bsc4I CCNNNNNNNGG 6 cut(s) 46, 1165, 2005, 2146, 2507, 2679
Bse118I RCCGGY 2 cut(s) 178, 243
Bse1I ACTGG 4 cut(s) 931, 1432, 1970, 2318
Bse3DI GCAATG 3 cut(s) 1044, 1136, 2615
BseAI TCCGGA 1 cut(s) 331
BseBI CCWGG 3 cut(s) 1005, 1910, 2006
BseLI CCNNNNNNNGG 6 cut(s) 46, 1165, 2005, 2146, 2507, 2679
BseMI GCAATG 3 cut(s) 1044, 1136, 2615
BseMII CTCAG 6 cut(s) 99, 356, 1137, 1167, 2022, 2388
BseNI ACTGG 4 cut(s) 931, 1432, 1970, 2318
BseRI GAGGAG 2 cut(s) 281, 284
BseSI GKGCMC 2 cut(s) 921, 1528
BseX3I CGGCCG 2 cut(s) 245, 414
BseXI GCAGC 4 cut(s) 1167, 2008, 2052, 2689
BseYI CCCAGC 1 cut(s) 2711
BsgI GTGCAG 2 cut(s) 919, 2556
Bsh1236I CGCG 8 cut(s) 65, 140, 209, 324, 351, 353, 419, 2347
Bsh1285I CGRYCG 3 cut(s) 56, 248, 417
BshFI GGCC 6 cut(s) 50, 247, 416, 733, 840, 1469
BshNI GGYRCC 3 cut(s) 67, 1293, 2407
BsiEI CGRYCG 3 cut(s) 56, 248, 417
BsiHKAI GWGCWC 3 cut(s) 921, 1528, 2655
BsiHKCI CYCGRG 1 cut(s) 2014
BsiSI CCGG 8 cut(s) 47, 132, 146, 179, 244, 248, 332, 2275
BslFI GGGAC 1 cut(s) 1523
BslI CCNNNNNNNGG 6 cut(s) 46, 1165, 2005, 2146, 2507, 2679
BsmAI GTCTC 5 cut(s) 419, 1477, 1781, 2191, 2292
BsmBI CGTCTC 2 cut(s) 419, 2191
BsmFI GGGAC 1 cut(s) 1523
BsmI GAATGC 1 cut(s) 2248
BsnI GGCC 6 cut(s) 50, 247, 416, 733, 840, 1469
Bso31I GGTCTC 2 cut(s) 1477, 1781
BsoBI CYCGRG 1 cut(s) 2014
Bsp119I TTCGAA 1 cut(s) 308
Bsp1286I GDGCHC 4 cut(s) 921, 1315, 1528, 2655
Bsp13I TCCGGA 1 cut(s) 331
Bsp1720I GCTNAGC 1 cut(s) 365
Bsp19I CCATGG 1 cut(s) 1898
Bsp68I TCGCGA 1 cut(s) 324
BspANI GGCC 6 cut(s) 50, 247, 416, 733, 840, 1469
BspCNI CTCAG 6 cut(s) 98, 357, 1136, 1168, 2023, 2389
BspEI TCCGGA 1 cut(s) 331
BspFNI CGCG 8 cut(s) 65, 140, 209, 324, 351, 353, 419, 2347
BspLI GGNNCC 8 cut(s) 69, 222, 242, 826, 1295, 1304, 1809, 2409
BspMAI CTGCAG 1 cut(s) 526
BspMI ACCTGC 1 cut(s) 173
BspPI GGATC 8 cut(s) 323, 340, 608, 995, 996, 1802, 1815, 2576
BspT104I TTCGAA 1 cut(s) 308
BspT107I GGYRCC 3 cut(s) 67, 1293, 2407
BspTI CTTAAG 1 cut(s) 908
BspTNI GGTCTC 2 cut(s) 1477, 1781
BsrBI CCGCTC 1 cut(s) 194
BsrDI GCAATG 3 cut(s) 1044, 1136, 2615
BsrFI RCCGGY 2 cut(s) 178, 243
BsrI ACTGG 4 cut(s) 931, 1432, 1970, 2318
BssAI RCCGGY 2 cut(s) 178, 243
BssNI GRCGYC 2 cut(s) 95, 173
BssT1I CCWWGG 5 cut(s) 568, 621, 1898, 2144, 2501
Bst2UI CCWGG 3 cut(s) 1005, 1910, 2006
Bst4CI ACNGT 6 cut(s) 648, 854, 884, 1307, 1388, 2659
Bst6I CTCTTC 2 cut(s) 621, 2187
BstACI GRCGYC 2 cut(s) 95, 173
BstAFI CTTAAG 1 cut(s) 908
BstBI TTCGAA 1 cut(s) 308
BstDEI CTNAG 6 cut(s) 85, 365, 1123, 1176, 2031, 2397
BstDSI CCRYGG 4 cut(s) 417, 513, 1306, 1898
BstENI CCTNNNNNAGG 1 cut(s) 2003
BstFNI CGCG 8 cut(s) 65, 140, 209, 324, 351, 353, 419, 2347
BstH2I RGCGCY 2 cut(s) 132, 293
BstMAI GTCTC 5 cut(s) 419, 1477, 1781, 2191, 2292
BstMCI CGRYCG 3 cut(s) 56, 248, 417
BstNI CCWGG 3 cut(s) 1005, 1910, 2006
BstNSI RCATGY 1 cut(s) 259
BstSCI CCNGG 6 cut(s) 45, 144, 1003, 1908, 2004, 2274
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 2 cut(s) 921, 1528
BstUI CGCG 8 cut(s) 65, 140, 209, 324, 351, 353, 419, 2347
BstV1I GCAGC 4 cut(s) 1167, 2008, 2052, 2689
BstV2I GAAGAC 1 cut(s) 1911
BstX2I RGATCY 4 cut(s) 345, 575, 988, 1807
BstYI RGATCY 4 cut(s) 345, 575, 988, 1807
BstZI CGGCCG 2 cut(s) 245, 414
BsuRI GGCC 6 cut(s) 50, 247, 416, 733, 840, 1469
BtgI CCRYGG 4 cut(s) 417, 513, 1306, 1898
BtgZI GCGATG 2 cut(s) 104, 339
BtrI CACGTC 1 cut(s) 2108
BtsI GCAGTG 1 cut(s) 2544
BtsIMutI CAGTG 3 cut(s) 307, 653, 2544
BtuMI TCGCGA 1 cut(s) 324
BveI ACCTGC 1 cut(s) 173
CciNI GCGGCCGC 1 cut(s) 414
Cfr10I RCCGGY 2 cut(s) 178, 243
Cfr13I GGNCC 4 cut(s) 49, 731, 825, 2704
Cfr42I CCGCGG 1 cut(s) 420
CseI GACGC 3 cut(s) 66, 71, 162
CsiI ACCWGGT 1 cut(s) 1908
Csp6I GTAC 7 cut(s) 527, 692, 812, 1120, 1294, 1507, 2048
CspCI CAANNNNNGTGG 2 cut(s) 1645, 1680
CviAII CATG 8 cut(s) 105, 256, 1142, 1316, 1751, 1772, 1783, 1899
CviQI GTAC 7 cut(s) 527, 692, 812, 1120, 1294, 1507, 2048
DdeI CTNAG 6 cut(s) 85, 365, 1123, 1176, 2031, 2397
DraI TTTAAA 1 cut(s) 2038
DraIII CACNNNGTG 1 cut(s) 1712
EaeI YGGCCR 2 cut(s) 245, 414
EagI CGGCCG 2 cut(s) 245, 414
Eam1104I CTCTTC 2 cut(s) 621, 2187
EarI CTCTTC 2 cut(s) 621, 2187
EciI GGCGGA 2 cut(s) 422, 437
Ecl136II GAGCTC 1 cut(s) 2653
EclXI CGGCCG 2 cut(s) 245, 414
Eco130I CCWWGG 5 cut(s) 568, 621, 1898, 2144, 2501
Eco24I GRGCYC 2 cut(s) 1315, 2655
Eco31I GGTCTC 2 cut(s) 1477, 1781
Eco32I GATATC 1 cut(s) 2566
Eco47I GGWCC 2 cut(s) 825, 2704
Eco52I CGGCCG 2 cut(s) 245, 414
Eco53kI GAGCTC 1 cut(s) 2653
Eco57I CTGAAG 3 cut(s) 1463, 1605, 1823
Eco88I CYCGRG 1 cut(s) 2014
EcoICRI GAGCTC 1 cut(s) 2653
EcoNI CCTNNNNNAGG 1 cut(s) 2003
EcoRI GAATTC 1 cut(s) 310
EcoRII CCWGG 3 cut(s) 1003, 1908, 2004
EcoRV GATATC 1 cut(s) 2566
EcoT14I CCWWGG 5 cut(s) 568, 621, 1898, 2144, 2501
EcoT38I GRGCYC 2 cut(s) 1315, 2655
ErhI CCWWGG 5 cut(s) 568, 621, 1898, 2144, 2501
Esp3I CGTCTC 2 cut(s) 419, 2191
FaeI CATG 8 cut(s) 108, 259, 1145, 1319, 1754, 1775, 1786, 1902
FaqI GGGAC 1 cut(s) 1523
FatI CATG 8 cut(s) 104, 255, 1141, 1315, 1750, 1771, 1782, 1898
FauI CCCGC 5 cut(s) 181, 205, 229, 374, 722
FauNDI CATATG 3 cut(s) 723, 1357, 1942
FbaI TGATCA 3 cut(s) 340, 388, 1648
FblI GTMKAC 2 cut(s) 80, 660
FriOI GRGCYC 2 cut(s) 1315, 2655
FspBI CTAG 3 cut(s) 461, 1934, 2000
FspI TGCGCA 1 cut(s) 2423
GsaI CCCAGC 1 cut(s) 2715
HaeII RGCGCY 2 cut(s) 132, 293
HaeIII GGCC 6 cut(s) 50, 247, 416, 733, 840, 1469
HapII CCGG 8 cut(s) 47, 132, 146, 179, 244, 248, 332, 2275
HgaI GACGC 3 cut(s) 66, 71, 162
Hin1I GRCGYC 2 cut(s) 95, 173
Hin1II CATG 8 cut(s) 108, 259, 1145, 1319, 1754, 1775, 1786, 1902
HincII GTYRAC 1 cut(s) 81
HindII GTYRAC 1 cut(s) 81
HindIII AAGCTT 1 cut(s) 20
HinfI GANTC 8 cut(s) 151, 518, 1187, 1379, 1779, 1835, 1894, 2551
HpaII CCGG 8 cut(s) 47, 132, 146, 179, 244, 248, 332, 2275
HphI GGTGA 6 cut(s) 90, 398, 664, 2264, 2342, 2709
Hpy99I CGWCG 8 cut(s) 65, 82, 169, 172, 178, 232, 235, 361
HpyAV CCTTC 8 cut(s) 111, 552, 627, 1104, 1543, 1798, 2150, 2317
HpyCH4III ACNGT 6 cut(s) 648, 854, 884, 1307, 1388, 2659
HpyCH4IV ACGT 5 cut(s) 95, 428, 1113, 1726, 2107
HpyF3I CTNAG 6 cut(s) 85, 365, 1123, 1176, 2031, 2397
HpySE526I ACGT 5 cut(s) 95, 428, 1113, 1726, 2107
Hsp92I GRCGYC 2 cut(s) 95, 173
Hsp92II CATG 8 cut(s) 108, 259, 1145, 1319, 1754, 1775, 1786, 1902
Kpn2I TCCGGA 1 cut(s) 331
KpnI GGTACC 1 cut(s) 1297
KroI GCCGGC 1 cut(s) 178
KroNI GCCGGC 1 cut(s) 180
Ksp22I TGATCA 3 cut(s) 340, 388, 1648
KspI CCGCGG 1 cut(s) 420
LmnI GCTCC 6 cut(s) 33, 191, 220, 1441, 1640, 2479
Lsp1109I GCAGC 4 cut(s) 1167, 2008, 2052, 2689
LweI GCATC 5 cut(s) 307, 351, 733, 882, 1634
MabI ACCWGGT 1 cut(s) 1908
MaeI CTAG 3 cut(s) 461, 1934, 2000
MaeII ACGT 5 cut(s) 95, 428, 1113, 1726, 2107
MaeIII GTNAC 3 cut(s) 91, 96, 2686
MbiI CCGCTC 1 cut(s) 194
MboII GAAGA 9 cut(s) 638, 1218, 1256, 1611, 1770, 1916, 2002, 2204, 2214
MfeI CAATTG 2 cut(s) 609, 1203
MflI RGATCY 4 cut(s) 345, 575, 988, 1807
MhlI GDGCHC 4 cut(s) 921, 1315, 1528, 2655
MlyI GAGTC 2 cut(s) 160, 1373
MmeI TCCRAC 3 cut(s) 243, 661, 942
MroI TCCGGA 1 cut(s) 331
MroNI GCCGGC 1 cut(s) 178
MroXI GAANNNNTTC 2 cut(s) 1745, 1994
MseI TTAA 7 cut(s) 909, 948, 1052, 1404, 1587, 2037, 2207
MslI CAYNNNNRTG 2 cut(s) 103, 2076
MspA1I CMGCKG 4 cut(s) 286, 419, 1022, 2680
MspCI CTTAAG 1 cut(s) 908
MspI CCGG 8 cut(s) 47, 132, 146, 179, 244, 248, 332, 2275
MspR9I CCNGG 6 cut(s) 47, 146, 1005, 1910, 2006, 2276
MunI CAATTG 2 cut(s) 609, 1203
Mva1269I GAATGC 1 cut(s) 2248
MvaI CCWGG 3 cut(s) 1005, 1910, 2006
MvnI CGCG 8 cut(s) 65, 140, 209, 324, 351, 353, 419, 2347
NaeI GCCGGC 1 cut(s) 180
NciI CCSGG 3 cut(s) 47, 146, 2276
NcoI CCATGG 1 cut(s) 1898
NdeI CATATG 3 cut(s) 723, 1357, 1942
NgoMIV GCCGGC 1 cut(s) 178
NlaIII CATG 8 cut(s) 108, 259, 1145, 1319, 1754, 1775, 1786, 1902
NlaIV GGNNCC 8 cut(s) 69, 222, 242, 826, 1295, 1304, 1809, 2409
NmeAIII GCCGAG 1 cut(s) 1697
NmuCI GTSAC 3 cut(s) 91, 96, 2686
NotI GCGGCCGC 1 cut(s) 414
NruI TCGCGA 1 cut(s) 324
NsbI TGCGCA 1 cut(s) 2423
NspI RCATGY 1 cut(s) 259
NspV TTCGAA 1 cut(s) 308
PaqCI CACCTGC 1 cut(s) 173
PciI ACATGT 1 cut(s) 255
PcsI WCGNNNNNNNCGW 4 cut(s) 170, 224, 2056, 2258
PctI GAATGC 1 cut(s) 2248
PdiI GCCGGC 1 cut(s) 180
PdmI GAANNNNTTC 2 cut(s) 1745, 1994
PfeI GAWTC 6 cut(s) 518, 1187, 1779, 1835, 1894, 2551
PflFI GACNNNGTC 1 cut(s) 430
PfoI TCCNGGA 1 cut(s) 1003
Ple19I CGATCG 1 cut(s) 56
PleI GAGTC 2 cut(s) 159, 1373
PpsI GAGTC 2 cut(s) 159, 1373
PscI ACATGT 1 cut(s) 255
Psp124BI GAGCTC 1 cut(s) 2655
Psp6I CCWGG 3 cut(s) 1003, 1908, 2004
PspFI CCCAGC 1 cut(s) 2711
PspGI CCWGG 3 cut(s) 1003, 1908, 2004
PspN4I GGNNCC 8 cut(s) 69, 222, 242, 826, 1295, 1304, 1809, 2409
PspPI GGNCC 4 cut(s) 49, 731, 825, 2704
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 4 cut(s) 345, 575, 988, 1807
PsyI GACNNNGTC 1 cut(s) 430
PvuI CGATCG 1 cut(s) 56
PvuII CAGCTG 2 cut(s) 286, 1022
RruI TCGCGA 1 cut(s) 324
RsaI GTAC 7 cut(s) 528, 693, 813, 1121, 1295, 1508, 2049
RsaNI GTAC 7 cut(s) 527, 692, 812, 1120, 1294, 1507, 2048
RseI CAYNNNNRTG 2 cut(s) 103, 2076
SacI GAGCTC 1 cut(s) 2655
SacII CCGCGG 1 cut(s) 420
SalI GTCGAC 1 cut(s) 79
SaqAI TTAA 7 cut(s) 909, 948, 1052, 1404, 1587, 2037, 2207
Sau96I GGNCC 4 cut(s) 49, 731, 825, 2704
SchI GAGTC 2 cut(s) 160, 1373
ScrFI CCNGG 6 cut(s) 47, 146, 1005, 1910, 2006, 2276
SduI GDGCHC 4 cut(s) 921, 1315, 1528, 2655
SexAI ACCWGGT 1 cut(s) 1908
SfaNI GCATC 5 cut(s) 307, 351, 733, 882, 1634
SfcI CTRYAG 1 cut(s) 522
Sfr303I CCGCGG 1 cut(s) 420
SfuI TTCGAA 1 cut(s) 308
SgrBI CCGCGG 1 cut(s) 420
SinI GGWCC 2 cut(s) 825, 2704
SmiMI CAYNNNNRTG 2 cut(s) 103, 2076
SmlI CTYRAG 2 cut(s) 908, 2666
SmoI CTYRAG 2 cut(s) 908, 2666
SspMI CTAG 3 cut(s) 461, 1934, 2000
SstI GAGCTC 1 cut(s) 2655
StyD4I CCNGG 6 cut(s) 45, 144, 1003, 1908, 2004, 2274
StyI CCWWGG 5 cut(s) 568, 621, 1898, 2144, 2501
TaaI ACNGT 6 cut(s) 648, 854, 884, 1307, 1388, 2659
TaiI ACGT 5 cut(s) 98, 431, 1116, 1729, 2110
TaqI TCGA 8 cut(s) 56, 80, 308, 434, 604, 1591, 1756, 2252
TatI WGTACW 3 cut(s) 526, 811, 1119
TfiI GAWTC 6 cut(s) 518, 1187, 1779, 1835, 1894, 2551
Tru1I TTAA 7 cut(s) 909, 948, 1052, 1404, 1587, 2037, 2207
Tru9I TTAA 7 cut(s) 909, 948, 1052, 1404, 1587, 2037, 2207
TscAI CASTG 3 cut(s) 307, 653, 2544
TseFI GTSAC 3 cut(s) 91, 96, 2686
TseI GCWGC 4 cut(s) 1155, 2021, 2065, 2677
Tsp45I GTSAC 3 cut(s) 91, 96, 2686
TspGWI ACGGA 5 cut(s) 216, 530, 1602, 1991, 2065
TspRI CASTG 3 cut(s) 307, 653, 2544
Tth111I GACNNNGTC 1 cut(s) 430
Vha464I CTTAAG 1 cut(s) 908
VneI GTGCAC 2 cut(s) 917, 1524
VpaK11BI GGWCC 2 cut(s) 825, 2704
XagI CCTNNNNNAGG 1 cut(s) 2003
XapI RAATTY 6 cut(s) 310, 507, 684, 977, 1400, 2293
XceI RCATGY 1 cut(s) 259
XmiI GTMKAC 2 cut(s) 80, 660
XmnI GAANNNNTTC 2 cut(s) 1745, 1994
XspI CTAG 3 cut(s) 461, 1934, 2000
ZraI GACGTC 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.