Rh3CG043000

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0004456
Physical Location & Seq
Forward (+)
2876163 .. 2884164
8002 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG043000.1

Sequence Viewer

Length: 2355 bp
ATGAAGCACATTTTCAAGAAGCTTCACATAGGGAGCAACCACGACCCGGCGGCTCGATCGAACGAGCCACCAACAGCGTTGACGTCACCTTCACCGTCATGCGACTCCGATCACCGTCAGAGCGCCGGGAACCATCCCCCGGCGAGTGCTTTTTCTTCGTCTTCGTCGTCGTCGCCGGTGGGGACGGTACCGGCGAACGGAGGTGTAGGTGCCAGTTCGGAGTCGTCTGCGACGGCGACGACCGGGAATCGGCCGGACTATATGTTGTCGGAGGAGGAGTTTCAGGTGCAGCTTGCGCTGGCGATCAGTGCTTCGAATTCGGATGATCCGGAGAAGGATCAGATCCGTGCGGCGACGATGCTGAGCTTGGGTGGCGGCCGTCGTGGTGGTGATCAGACGCGGGATGAGGTGGATGCGGCCGCCGCGGAGACCTTGTCCAGGCACTATTGGGAATACAATGTTCTAGACTACGACGAAAAAGTGGTTGATGGGTTTTATGATGTATATGGACTTTCCACGGATTCCGCAGTACAAGGAAAAATGCCTTCTCTCGCAAATCTTGAAACAAACCTTGGGAGATCTGGATTTGAAGTTTCATTAGTAAATCGAACACTTGATCCTACCTTGGAAGAGTTGGTGCAAATTGCACAGTGTATTGCGGTAGACTGCCCCATCACCAATGTTGGAATTTTGGTACAGAGGCTTGCTGAACTCGTTAGCGGACATATGGGCGGGCCTGTAAAGGATGCTAATATCATCTTGGCGAGGTGGATGGAAAGAAGTTCAGAGTTGAGGGCATCTTCACAAACAATTGTACTACCTATTGGGTCCATAACCATTGGCCTCTCCCGACATCGTGCTTTACTTTTCAAGGTATTAGCTGACAGCATCAAGATGCCTTGCAGACTGCTTAAGGGTGTGCACTACACAGGTGTCGAGGATGGTGCTATTAATGTAGTAAAGTTGGAGGATGACAGGGAGTTTATGGTGGATCTTATGGCTGATCCTGGAACACTCATACCAGCTGACAATCCAAGTGCAAAGGACACTACTTTCATGCCAATCAATCCGAAATCGAACACAATCCCAACTTTCCCTTCTTTGATTGATTCTGAAATTGTGTACTCACGACCAAAGCCATTACATGGAGAGGGAAGCAGCCAAAACTTGCAAACTTCTGAGAAAGCAGAATCATTCTGGGGTGAAATTGGCGGCAGAGGAGTTGGTTCTTCTGGAGTCCCCAAGAGAGGAACTCAATTAGATCATCTTCCCTCGTCAGCTTTTGAAAATTCACGGTACAGAGGGAACCGTGGGGCACCTGCAGTTGATGGTGTGAGGATGAATCAAAATGTAGTTCCATCTGCTCAAAATAACTCGGAAGACTCTAACAGTCTTTTTGCAGATCTTAACCCATTCCAAGTAAAAGGAACTGGGAAGGCTCCTATGTATAACAAACCTATGGAGAATAAGGCCGATGAGCTTCAGAGACCAAGAAATAATCTTGCCTCATACACAAAAAATGTTCGTGCACACAATGAAGTCCCGAAAAAGAAGGAGTATGATTATTTGGATGGAATTATCCCAAGAGTTAATCGAGAACCCAATGGTTATAATCCGTCATCTTCAGCTTCGACCAGCTCCACTAAATCTGAACAGATCAATACTGGTGGTTTCAAATCTACTGCACATCCAAATATGTCTGAGTATTTACAAAGTGGCTCTGTAGAACGTGAGAATAATATAAATGGCTTCCATGATCGAAGAAAGTTCACTCATGAAAGATTCATGGAGACCAATTCCAAACTGAAGGATCCAGAAAGTTGCAACTCATCCTTTGATTCCATAACAAGTAGGGTTGAGCAAGTATTTGAGGATGTTGAAGTAGGTGAAAGTGAAATTCCGTGGGAAGACCTGGTTATTGGAGAAAGAATTGGACTTGGTTCATATGGAGAGGTGTACCATGCTGACTGGAATGGCACGGAAGTTGCTGTGAAGAAGTTCCTAGACCAGGATTTCTCGGGTGCTGCTTTGGCTGAGTTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGCCATCCAAATGTTGTGCTTTTTATGGGTGCTATTACGCGTCCTCCTAACCTCTCTATCATTACAGAGTTCCTTCCAAGGTATAAGATGAACCTCGAACAATATGAAATGGTGATTGCAATCAACTACATATGCTTACATATTACATTTGTCAACTTTGCCATTATAACTGGTCTATTTATACATCAAACAAAAAAAAAAAAGTTTTGTAATAACTCCACCAGCATTTGGTTTCCCCAGGGGAAGTCTATATCGGATTATCCATCGTCCTCATTGTCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0002229 GO:0002239 GO:0002831 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005769 GO:0005783 GO:0005794 GO:0005798 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009787 GO:0009788 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010648 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031982 GO:0031984 GO:0032101 GO:0032147 GO:0032268 GO:0032270 GO:0033674 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043900 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097708 GO:0098542 GO:0098588 GO:0098791 GO:0098805 GO:0140096 GO:1900150 GO:1900424 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1902531 GO:1902533 GO:1905957 GO:1905958 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

784

Amino Acids

86.08

Weight (kDa)

5.77

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 142 - 340 1.4e-74 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 639 - 718 5.8e-13 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 640 - 719 3.1e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1611, 2237
AarI CACCTGC 1 cut(s) 1327
AatII GACGTC 1 cut(s) 86
Acc36I ACCTGC 1 cut(s) 1327
Acc65I GGTACC 1 cut(s) 187
AccB1I GGYRCC 3 cut(s) 187, 209, 1315
AccB7I CCANNNNNTGG 2 cut(s) 1145, 2298
AccI GTMKAC 1 cut(s) 663
AccII CGCG 3 cut(s) 400, 425, 2110
AccIII TCCGGA 1 cut(s) 328
AclWI GGATC 8 cut(s) 320, 337, 345, 611, 998, 999, 1805, 1818
AcoI YGGCCR 3 cut(s) 251, 376, 417
AcsI RAATTY 4 cut(s) 316, 687, 1288, 1896
AcuI CTGAAG 3 cut(s) 1466, 1608, 1826
AcyI GRCGYC 1 cut(s) 83
AfaI GTAC 8 cut(s) 189, 531, 696, 816, 1124, 1298, 1958, 2052
AfiI CCNNNNNNNGG 9 cut(s) 46, 139, 197, 249, 438, 1145, 1247, 2008, 2298
AflII CTTAAG 1 cut(s) 911
AflIII ACRYGT 1 cut(s) 2108
AgsI TTSAA 8 cut(s) 16, 563, 590, 871, 1286, 1675, 1880, 2041
AjnI CCWGG 5 cut(s) 437, 1006, 1911, 2007, 2307
AjuI GAANNNNNNNTTGG 4 cut(s) 555, 587, 1081, 1113
AloI GAACNNNNNNTCC 2 cut(s) 601, 633
AluBI AGCT 9 cut(s) 22, 292, 366, 881, 1025, 1280, 1480, 1628, 1638
AluI AGCT 9 cut(s) 22, 292, 366, 881, 1025, 1280, 1480, 1628, 1638
Alw21I GWGCWC 2 cut(s) 924, 1531
Alw26I GTCTC 3 cut(s) 422, 1480, 1784
Alw44I GTGCAC 2 cut(s) 920, 1527
AlwI GGATC 8 cut(s) 320, 337, 345, 611, 998, 999, 1805, 1818
Ama87I CYCGRG 1 cut(s) 2017
Aor13HI TCCGGA 1 cut(s) 328
AoxI GGCC 6 cut(s) 251, 376, 417, 734, 841, 1470
ApaLI GTGCAC 2 cut(s) 920, 1527
ApeKI GCWGC 4 cut(s) 289, 1158, 2024, 2068
ApoI RAATTY 4 cut(s) 316, 687, 1288, 1896
AseI ATTAAT 1 cut(s) 951
Asp700I GAANNNNTTC 1 cut(s) 1997
Asp718I GGTACC 1 cut(s) 187
AspLEI GCGC 3 cut(s) 125, 298, 2073
AspS9I GGNCC 2 cut(s) 734, 828
AsuC2I CCSGG 4 cut(s) 47, 127, 140, 244
AsuHPI GGTGA 8 cut(s) 78, 84, 104, 401, 667, 1214, 1898, 2194
AsuII TTCGAA 1 cut(s) 314
AvaI CYCGRG 1 cut(s) 2017
AvaII GGWCC 1 cut(s) 828
BaeGI GKGCMC 3 cut(s) 924, 1318, 1531
BamHI GGATCC 1 cut(s) 1810
BanI GGYRCC 3 cut(s) 187, 209, 1315
BbsI GAAGAC 3 cut(s) 153, 1386, 1914
Bbv12I GWGCWC 2 cut(s) 924, 1531
BbvI GCAGC 4 cut(s) 301, 1170, 2011, 2055
BceAI ACGGC 2 cut(s) 249, 363
BcgI CGANNNNNNTGC 2 cut(s) 926, 960
BciT130I CCWGG 5 cut(s) 439, 1008, 1913, 2009, 2309
BclI TGATCA 1 cut(s) 391
BcnI CCSGG 4 cut(s) 47, 127, 140, 244
BcoDI GTCTC 3 cut(s) 422, 1480, 1784
BfaI CTAG 2 cut(s) 464, 2003
BfmI CTRYAG 2 cut(s) 1320, 1722
BfoI RGCGCY 1 cut(s) 126
BfrI CTTAAG 1 cut(s) 911
BfuAI ACCTGC 1 cut(s) 1327
BglII AGATCT 2 cut(s) 578, 1402
BlpI GCTNAGC 1 cut(s) 362
Bme1390I CCNGG 9 cut(s) 47, 127, 140, 244, 439, 1008, 1913, 2009, 2309
Bme18I GGWCC 1 cut(s) 828
BmeT110I CYCGRG 1 cut(s) 2017
BmgT120I GGNCC 2 cut(s) 734, 828
BmiI GGNNCC 8 cut(s) 131, 189, 211, 829, 1307, 1317, 1440, 1812
BmrFI CCNGG 9 cut(s) 47, 127, 140, 244, 439, 1008, 1913, 2009, 2309
BmrI ACTGGG 1 cut(s) 1440
BmsI GCATC 6 cut(s) 348, 403, 736, 806, 885, 897
BmuI ACTGGG 1 cut(s) 1440
BpiI GAAGAC 3 cut(s) 153, 1386, 1914
BplI GAGNNNNNCTC 2 cut(s) 1237, 1269
BpmI CTGGAG 1 cut(s) 1254
Bpu1102I GCTNAGC 1 cut(s) 362
Bpu14I TTCGAA 1 cut(s) 314
BpuMI CCSGG 4 cut(s) 47, 127, 140, 244
BsaBI GATNNNNATC 1 cut(s) 2189
BsaHI GRCGYC 1 cut(s) 83
BsaI GGTCTC 3 cut(s) 422, 1480, 1784
BsaWI WCCGGW 1 cut(s) 328
BsaXI ACNNNNNCTCC 6 cut(s) 263, 293, 419, 449, 2098, 2128
Bsc4I CCNNNNNNNGG 9 cut(s) 46, 139, 197, 249, 438, 1145, 1247, 2008, 2298
Bse118I RCCGGY 2 cut(s) 175, 190
Bse1I ACTGG 5 cut(s) 213, 1435, 1669, 1973, 2245
Bse8I GATNNNNATC 1 cut(s) 2189
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 5 cut(s) 439, 1008, 1913, 2009, 2309
BseJI GATNNNNATC 1 cut(s) 2189
BseLI CCNNNNNNNGG 9 cut(s) 46, 139, 197, 249, 438, 1145, 1247, 2008, 2298
BseMII CTCAG 4 cut(s) 353, 1170, 1692, 2025
BseNI ACTGG 5 cut(s) 213, 1435, 1669, 1973, 2245
BseRI GAGGAG 3 cut(s) 287, 290, 1233
BseSI GKGCMC 3 cut(s) 924, 1318, 1531
BseX3I CGGCCG 3 cut(s) 251, 376, 417
BseXI GCAGC 4 cut(s) 301, 1170, 2011, 2055
BsgI GTGCAG 2 cut(s) 308, 1668
Bsh1236I CGCG 3 cut(s) 400, 425, 2110
Bsh1285I CGRYCG 5 cut(s) 59, 243, 254, 379, 420
BshFI GGCC 6 cut(s) 253, 378, 419, 736, 843, 1472
BshNI GGYRCC 3 cut(s) 187, 209, 1315
BsiEI CGRYCG 5 cut(s) 59, 243, 254, 379, 420
BsiHKAI GWGCWC 2 cut(s) 924, 1531
BsiHKCI CYCGRG 1 cut(s) 2017
BsiSI CCGG 8 cut(s) 47, 126, 140, 176, 191, 243, 254, 329
BslFI GGGAC 3 cut(s) 196, 1223, 1526
BslI CCNNNNNNNGG 9 cut(s) 46, 139, 197, 249, 438, 1145, 1247, 2008, 2298
BsmAI GTCTC 3 cut(s) 422, 1480, 1784
BsmFI GGGAC 3 cut(s) 196, 1223, 1526
BsnI GGCC 6 cut(s) 253, 378, 419, 736, 843, 1472
Bso31I GGTCTC 3 cut(s) 422, 1480, 1784
BsoBI CYCGRG 1 cut(s) 2017
Bsp119I TTCGAA 1 cut(s) 314
Bsp1286I GDGCHC 3 cut(s) 924, 1318, 1531
Bsp13I TCCGGA 1 cut(s) 328
Bsp1720I GCTNAGC 1 cut(s) 362
BspANI GGCC 6 cut(s) 253, 378, 419, 736, 843, 1472
BspCNI CTCAG 4 cut(s) 354, 1171, 1693, 2026
BspEI TCCGGA 1 cut(s) 328
BspFNI CGCG 3 cut(s) 400, 425, 2110
BspHI TCATGA 1 cut(s) 1774
BspLI GGNNCC 8 cut(s) 131, 189, 211, 829, 1307, 1317, 1440, 1812
BspMAI CTGCAG 1 cut(s) 1324
BspMI ACCTGC 1 cut(s) 1327
BspPI GGATC 8 cut(s) 320, 337, 345, 611, 998, 999, 1805, 1818
BspT104I TTCGAA 1 cut(s) 314
BspT107I GGYRCC 3 cut(s) 187, 209, 1315
BspTI CTTAAG 1 cut(s) 911
BspTNI GGTCTC 3 cut(s) 422, 1480, 1784
BsrFI RCCGGY 2 cut(s) 175, 190
BsrI ACTGG 5 cut(s) 213, 1435, 1669, 1973, 2245
BssAI RCCGGY 2 cut(s) 175, 190
BssNI GRCGYC 1 cut(s) 83
BssT1I CCWWGG 3 cut(s) 571, 624, 2147
Bst2UI CCWGG 5 cut(s) 439, 1008, 1913, 2009, 2309
Bst4CI ACNGT 7 cut(s) 96, 116, 187, 651, 1296, 1310, 1391
Bst6I CTCTTC 1 cut(s) 624
BstACI GRCGYC 1 cut(s) 83
BstAFI CTTAAG 1 cut(s) 911
BstBI TTCGAA 1 cut(s) 314
BstC8I GCNNGC 4 cut(s) 294, 300, 705, 734
BstDEI CTNAG 4 cut(s) 362, 1179, 1701, 2034
BstDSI CCRYGG 4 cut(s) 423, 516, 1309, 1901
BstENI CCTNNNNNAGG 2 cut(s) 436, 2006
BstFNI CGCG 3 cut(s) 400, 425, 2110
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 3 cut(s) 125, 298, 2073
BstMAI GTCTC 3 cut(s) 422, 1480, 1784
BstMCI CGRYCG 5 cut(s) 59, 243, 254, 379, 420
BstMWI GCNNNNNNNGC 6 cut(s) 295, 308, 372, 422, 2030, 2068
BstNI CCWGG 5 cut(s) 439, 1008, 1913, 2009, 2309
BstSCI CCNGG 9 cut(s) 45, 125, 138, 242, 437, 1006, 1911, 2007, 2307
BstSFI CTRYAG 2 cut(s) 1320, 1722
BstSLI GKGCMC 3 cut(s) 924, 1318, 1531
BstUI CGCG 3 cut(s) 400, 425, 2110
BstV1I GCAGC 4 cut(s) 301, 1170, 2011, 2055
BstV2I GAAGAC 3 cut(s) 153, 1386, 1914
BstX2I RGATCY 5 cut(s) 342, 578, 991, 1402, 1810
BstYI RGATCY 5 cut(s) 342, 578, 991, 1402, 1810
BstZI CGGCCG 3 cut(s) 251, 376, 417
BsuRI GGCC 6 cut(s) 253, 378, 419, 736, 843, 1472
BtgI CCRYGG 4 cut(s) 423, 516, 1309, 1901
BtsIMutI CAGTG 2 cut(s) 313, 656
BveI ACCTGC 1 cut(s) 1327
Cac8I GCNNGC 4 cut(s) 294, 300, 705, 734
CciI TCATGA 1 cut(s) 1774
CciNI GCGGCCGC 1 cut(s) 417
CfoI GCGC 3 cut(s) 125, 298, 2073
Cfr10I RCCGGY 2 cut(s) 175, 190
Cfr13I GGNCC 2 cut(s) 734, 828
Cfr42I CCGCGG 1 cut(s) 426
CseI GACGC 2 cut(s) 406, 2099
CsiI ACCWGGT 1 cut(s) 1911
Csp6I GTAC 8 cut(s) 188, 530, 695, 815, 1123, 1297, 1957, 2051
CspCI CAANNNNNGTGG 2 cut(s) 1648, 1683
CviAII CATG 7 cut(s) 99, 1057, 1145, 1754, 1775, 1786, 1961
CviQI GTAC 8 cut(s) 188, 530, 695, 815, 1123, 1297, 1957, 2051
DdeI CTNAG 4 cut(s) 362, 1179, 1701, 2034
EaeI YGGCCR 3 cut(s) 251, 376, 417
EagI CGGCCG 3 cut(s) 251, 376, 417
Eam1104I CTCTTC 1 cut(s) 624
EarI CTCTTC 1 cut(s) 624
EclXI CGGCCG 3 cut(s) 251, 376, 417
Eco130I CCWWGG 3 cut(s) 571, 624, 2147
Eco31I GGTCTC 3 cut(s) 422, 1480, 1784
Eco47I GGWCC 1 cut(s) 828
Eco52I CGGCCG 3 cut(s) 251, 376, 417
Eco57I CTGAAG 3 cut(s) 1466, 1608, 1826
Eco88I CYCGRG 1 cut(s) 2017
EcoNI CCTNNNNNAGG 2 cut(s) 436, 2006
EcoRI GAATTC 1 cut(s) 316
EcoRII CCWGG 5 cut(s) 437, 1006, 1911, 2007, 2307
EcoT14I CCWWGG 3 cut(s) 571, 624, 2147
ErhI CCWWGG 3 cut(s) 571, 624, 2147
FaeI CATG 7 cut(s) 102, 1060, 1148, 1757, 1778, 1789, 1964
FaqI GGGAC 3 cut(s) 196, 1223, 1526
FatI CATG 7 cut(s) 98, 1056, 1144, 1753, 1774, 1785, 1960
FauI CCCGC 2 cut(s) 393, 725
FauNDI CATATG 3 cut(s) 726, 1945, 2201
FbaI TGATCA 1 cut(s) 391
FblI GTMKAC 1 cut(s) 663
FspBI CTAG 2 cut(s) 464, 2003
GlaI GCGC 3 cut(s) 124, 297, 2072
GsuI CTGGAG 1 cut(s) 1254
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 6 cut(s) 253, 378, 419, 736, 843, 1472
HapII CCGG 8 cut(s) 47, 126, 140, 176, 191, 243, 254, 329
HgaI GACGC 2 cut(s) 406, 2099
HhaI GCGC 3 cut(s) 125, 298, 2073
Hin1I GRCGYC 1 cut(s) 83
Hin1II CATG 7 cut(s) 102, 1060, 1148, 1757, 1778, 1789, 1964
Hin6I GCGC 3 cut(s) 123, 296, 2071
HinP1I GCGC 3 cut(s) 123, 296, 2071
HincII GTYRAC 2 cut(s) 81, 2224
HindII GTYRAC 2 cut(s) 81, 2224
HindIII AAGCTT 1 cut(s) 20
HpaII CCGG 8 cut(s) 47, 126, 140, 176, 191, 243, 254, 329
HphI GGTGA 8 cut(s) 78, 84, 104, 401, 667, 1214, 1898, 2194
Hpy166II GTNNAC 8 cut(s) 81, 664, 922, 1123, 1529, 1770, 1957, 2224
Hpy8I GTNNAC 8 cut(s) 81, 664, 922, 1123, 1529, 1770, 1957, 2224
Hpy99I CGWCG 8 cut(s) 169, 172, 175, 235, 241, 358, 384, 476
HpyAV CCTTC 8 cut(s) 99, 328, 555, 1107, 1429, 1546, 1801, 2153
HpyCH4III ACNGT 7 cut(s) 96, 116, 187, 651, 1296, 1310, 1391
HpyCH4IV ACGT 2 cut(s) 83, 1729
HpyF10VI GCNNNNNNNGC 6 cut(s) 295, 308, 372, 422, 2030, 2068
HpyF3I CTNAG 4 cut(s) 362, 1179, 1701, 2034
HpySE526I ACGT 2 cut(s) 83, 1729
Hsp92I GRCGYC 1 cut(s) 83
Hsp92II CATG 7 cut(s) 102, 1060, 1148, 1757, 1778, 1789, 1964
HspAI GCGC 3 cut(s) 123, 296, 2071
Kpn2I TCCGGA 1 cut(s) 328
KpnI GGTACC 1 cut(s) 191
Ksp22I TGATCA 1 cut(s) 391
KspI CCGCGG 1 cut(s) 426
LmnI GCTCC 3 cut(s) 33, 1444, 1643
Lsp1109I GCAGC 4 cut(s) 301, 1170, 2011, 2055
LweI GCATC 6 cut(s) 348, 403, 736, 806, 885, 897
MabI ACCWGGT 1 cut(s) 1911
MaeI CTAG 2 cut(s) 464, 2003
MaeII ACGT 2 cut(s) 83, 1729
MaeIII GTNAC 1 cut(s) 84
MfeI CAATTG 1 cut(s) 810
MflI RGATCY 5 cut(s) 342, 578, 991, 1402, 1810
MhlI GDGCHC 3 cut(s) 924, 1318, 1531
MluI ACGCGT 1 cut(s) 2108
MlyI GAGTC 4 cut(s) 98, 230, 1245, 1376
MmeI TCCRAC 3 cut(s) 249, 664, 945
MroI TCCGGA 1 cut(s) 328
MroXI GAANNNNTTC 1 cut(s) 1997
MseI TTAA 4 cut(s) 912, 951, 1407, 1590
MslI CAYNNNNRTG 3 cut(s) 97, 893, 2079
MspA1I CMGCKG 2 cut(s) 425, 1025
MspCI CTTAAG 1 cut(s) 911
MspI CCGG 8 cut(s) 47, 126, 140, 176, 191, 243, 254, 329
MspR9I CCNGG 9 cut(s) 47, 127, 140, 244, 439, 1008, 1913, 2009, 2309
MunI CAATTG 1 cut(s) 810
MvaI CCWGG 5 cut(s) 439, 1008, 1913, 2009, 2309
MvnI CGCG 3 cut(s) 400, 425, 2110
MwoI GCNNNNNNNGC 6 cut(s) 295, 308, 372, 422, 2030, 2068
NciI CCSGG 4 cut(s) 47, 127, 140, 244
NdeI CATATG 3 cut(s) 726, 1945, 2201
NlaIII CATG 7 cut(s) 102, 1060, 1148, 1757, 1778, 1789, 1964
NlaIV GGNNCC 8 cut(s) 131, 189, 211, 829, 1307, 1317, 1440, 1812
NmuCI GTSAC 1 cut(s) 84
NotI GCGGCCGC 1 cut(s) 417
NspV TTCGAA 1 cut(s) 314
PagI TCATGA 1 cut(s) 1774
PaqCI CACCTGC 1 cut(s) 1327
PasI CCCWGGG 1 cut(s) 2308
PcsI WCGNNNNNNNCGW 3 cut(s) 164, 191, 2059
PdmI GAANNNNTTC 1 cut(s) 1997
PfeI GAWTC 7 cut(s) 247, 521, 1109, 1190, 1342, 1782, 1838
PflFI GACNNNGTC 1 cut(s) 433
PflMI CCANNNNNTGG 2 cut(s) 1145, 2298
PfoI TCCNGGA 1 cut(s) 1006
Ple19I CGATCG 1 cut(s) 59
PleI GAGTC 4 cut(s) 98, 229, 1244, 1376
PpsI GAGTC 4 cut(s) 98, 229, 1244, 1376
PshBI ATTAAT 1 cut(s) 951
PsiI TTATAA 2 cut(s) 1611, 2237
Psp6I CCWGG 5 cut(s) 437, 1006, 1911, 2007, 2307
PspGI CCWGG 5 cut(s) 437, 1006, 1911, 2007, 2307
PspN4I GGNNCC 8 cut(s) 131, 189, 211, 829, 1307, 1317, 1440, 1812
PspPI GGNCC 2 cut(s) 734, 828
PstI CTGCAG 1 cut(s) 1324
PsuI RGATCY 5 cut(s) 342, 578, 991, 1402, 1810
PsyI GACNNNGTC 1 cut(s) 433
PvuI CGATCG 1 cut(s) 59
PvuII CAGCTG 1 cut(s) 1025
RsaI GTAC 8 cut(s) 189, 531, 696, 816, 1124, 1298, 1958, 2052
RsaNI GTAC 8 cut(s) 188, 530, 695, 815, 1123, 1297, 1957, 2051
RseI CAYNNNNRTG 3 cut(s) 97, 893, 2079
SacII CCGCGG 1 cut(s) 426
SaqAI TTAA 4 cut(s) 912, 951, 1407, 1590
Sau96I GGNCC 2 cut(s) 734, 828
SchI GAGTC 4 cut(s) 98, 230, 1245, 1376
ScrFI CCNGG 9 cut(s) 47, 127, 140, 244, 439, 1008, 1913, 2009, 2309
SduI GDGCHC 3 cut(s) 924, 1318, 1531
SexAI ACCWGGT 1 cut(s) 1911
SfaNI GCATC 6 cut(s) 348, 403, 736, 806, 885, 897
SfcI CTRYAG 2 cut(s) 1320, 1722
Sfr303I CCGCGG 1 cut(s) 426
SfuI TTCGAA 1 cut(s) 314
SgrAI CRCCGGYG 1 cut(s) 175
SgrBI CCGCGG 1 cut(s) 426
SinI GGWCC 1 cut(s) 828
SmiMI CAYNNNNRTG 3 cut(s) 97, 893, 2079
SmlI CTYRAG 1 cut(s) 911
SmoI CTYRAG 1 cut(s) 911
SspMI CTAG 2 cut(s) 464, 2003
StyD4I CCNGG 9 cut(s) 45, 125, 138, 242, 437, 1006, 1911, 2007, 2307
StyI CCWWGG 3 cut(s) 571, 624, 2147
TaaI ACNGT 7 cut(s) 96, 116, 187, 651, 1296, 1310, 1391
TaiI ACGT 2 cut(s) 86, 1732
TatI WGTACW 3 cut(s) 529, 814, 1122
TauI GCSGC 7 cut(s) 53, 353, 378, 419, 422, 425, 1215
TfiI GAWTC 7 cut(s) 247, 521, 1109, 1190, 1342, 1782, 1838
Tru1I TTAA 4 cut(s) 912, 951, 1407, 1590
Tru9I TTAA 4 cut(s) 912, 951, 1407, 1590
TscAI CASTG 2 cut(s) 313, 656
TseFI GTSAC 1 cut(s) 84
TseI GCWGC 4 cut(s) 289, 1158, 2024, 2068
Tsp45I GTSAC 1 cut(s) 84
TspGWI ACGGA 7 cut(s) 213, 335, 533, 1605, 1890, 1994, 2068
TspRI CASTG 2 cut(s) 313, 656
Tth111I GACNNNGTC 1 cut(s) 433
Van91I CCANNNNNTGG 2 cut(s) 1145, 2298
Vha464I CTTAAG 1 cut(s) 911
VneI GTGCAC 2 cut(s) 920, 1527
VpaK11BI GGWCC 1 cut(s) 828
VspI ATTAAT 1 cut(s) 951
XagI CCTNNNNNAGG 2 cut(s) 436, 2006
XapI RAATTY 4 cut(s) 316, 687, 1288, 1896
XbaI TCTAGA 1 cut(s) 463
XmiI GTMKAC 1 cut(s) 663
XmnI GAANNNNTTC 1 cut(s) 1997
XspI CTAG 2 cut(s) 464, 2003
ZraI GACGTC 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.