pycom04g19360

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0004456
Physical Location & Seq
Reverse (-)
21098429 .. 21104681
6253 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g19360.1

Sequence Viewer

Length: 2850 bp
ATGAAGCACATTTTCAAGAAGCTTCACATAGGAAGCAACCACGACCCGACCCGATCGAACGAGGCCGCGGCGGCTTCCCCATCCACCGTGGCCTCACCGTCGCTCGCTTCCGATCACCATACGGTGTCCGGTCAGACGTCAGGGAACGCTCCGGCGAGTCCTTCGTCGTCTTCGCCGACGCCGGAGGCGACCGTGCCGGCTGGGGGAGGTGGCACTGTGGAGTCGACGACGACTGTGAACCGACCGGACTATATGATGTCGGAAGAGGAGTTTCAGGTCCAGCTCGCTTTAGCGATCAGCGCTTCGAATTCGGACTATCGGGATGATCCGGAGAAGGATCAGATCCGGGCGGCGACGCTGCTGAGCTTGGGCGGCAATCGGATCCAGTCTTCGAGAGATAAGGTCGAGGCGGCGGCGGAGACCTTGTCGCGGCACTATTGGGAGTTCAATGCGCTAGACTATGAGGAGAAAGTGGTTGATGGATTTTATGATGTATATGGACTTTCCCCAGATTCAGCAATTCAAGGAAAAATGCCATCTCTCACAAATCTTGAAGCAAACCTTGGGAGTTCTGGATTTGAAGTTTCATTAGTAAATCGAAAAGTTGATCGATCGAATTCATTCACTGTCTTGGAAGAGTTGGTGCAAATTGCACAGTGTATTGCTTTAGACTGTCCTGTCACCAATGTTGGTCTTTTAGTTCAGAGGCTTGCTGAACTCGTTAGCGAACGTATGGGTGGGCCTGTAAAGGATGCAAATGTCGTATTAGCGAGATGGATGGAAATAAGCACAGAGTTGAGGACATCAATGCAAACTAGTGTACTGCCTATTGGATCCATAACTATTGGTCTCTCCCGACATCGTGCTTTGCTTTTCAAGGTACTAGCTGACAATATCGAGATGCCCTGTAGACTGCTTAAGGGAGTTCATTACACTGGTGCTGAGGACGGTGCAGTTAATGTAATAAAGTTGGAGGATGACAGGGAGTTTTTGGTGGATCTGATGGCTGATCCTGGAACACTCGTACCAACTGACATTCAAAGTTCAAAGGACACTACCTTTAAGCCGTATAATCCAAACTTGAACAAACTTCCTACTTTACATTCTTATATCGATACAGATATCGCTTACCTAGGACCAAAGCCATTACATGGAGAGGGAAGCAGCCAAAACTCTGCAGTTGAAAGTAGTTCAGGTCTGGAGAGAAGACCAAGTTCAGAGAAAGGAGAATCATTTCCAACATTCTCAGGTGCAAGTAGTGACAGTGGAGTTGGTTCTTCTGGAATACCGAATAGAACAACTCAGTTAGATCAGCTTTCCTCATCAGCCTTCGAAAATTCAAAGTACAACAGAGGGAATCGTGGGGCTCATGCAGGTGATGGTGGTATGAGGATGAATGTAAATGTAGTTCCATATACTCAAAACAACTCTGAGGACCCAAAGAACCTTTTTGCTGATCTTAACCCATTCCAAATAAAAGGACCTGGGAAAGCTTCTATGTATAACAAACCGGTGGAGAATAAAGTTGAAGAGCTTCAGAAAAAACAAAATAATCTTGCTTCTGGTCGACCTCCTGCATCATTGATGTGGAAAATTAAATATGCTTTCAATGAAGTCCCTAAAAGAAAGGAGTATGATGGCATCTTCCCAAAAAGTAATCGTGAGCCTAATGGTTACAATTCATCATCTTCAGCTTCGACCAGCTCTACTGTTGCTGAACAGATCAATCCTGGTGGTTTCGGATCAACTGCTCATTCAAATATGTTTGATAGAGATGGCGATGCCAAAAGTTTTAAGGGGGAACAACCCAGGGCTCCGAACTATTTACAGAACAACACAGTAGATGCTACGTATCAGAACAATGAAATTGGTTCCCATGATCCTAGAAAGTTCACGCATGACAGATTTATGGAATCCAATTTGAAACTGAAGGATCCAGAAAGTTGTAACTCGTCATTTGATTCCATTACAAGCAGGGTTGAATATCATTCTAGCTCATCATTTGAGGATGTTGACGTAGGTGAATGTGAAGTTCCATGGGAAGACCTGGTTATTGGAGAAAGGATTGGACTAGGTTCATATGGAGAGGTATACCATGCTGATTGGCATGGCACGGAAGTTGCGGTGAAGAAGTTCCTAGATCAGGACTTCTCGGGTGCTGCTTTGGCTGAGTTCAAAAGAGAAGTACGAATAATGCGGAGATTGCGTCATCCAAACATTGTCCTTTTCATGGGGGCTGTTACACGTCCTCCAAACCTCTCTATCATTACGGAGTTCCTTCCAAGGGGAAGTCTATATCGGATTATCCATCGTCCTCATTGTCAAATTGATGAGAAACGTAGAATAAAGATGGCTCTTGATGTGGCAAGGGGTATGAATTGCTTGCATGCCAGTACACCGACGATTGTCCACCGGGATTTGAAGTCTCCAAATCTGCTGGTTGATAAGAACTGGAATGTGAAGGTTGGTGATTTTGGATTGTCGCGCTTGAAACACAACACTTTCTTGTCGTCCAAATCAACTGCTGGAACGCCTGAGTGGATGTCACCTGAAGTTCTCCGCAACGAAAACTCAAATGAAAAGTTAGTAACTCTTGCTATTATATTTCTGGTTCTTTTCGTCGTTGGTGCAGTGGGTTTCCAGAATCGTCGCCTTGAGATCCCCAAGGAACTTGATCCCCTTGTTGCAAGGATAATTTGGGAATGTTGGCAGACCGAACCAAACTTGCGCCCCTCGTTCTCAGAACTCACGGTAGCTCTCAAGCCCTTGCAGCGGCTTGTCATTCCGTCAAATCTGGACCACCCGAGCTCACCTCTCCGGCAAGAAATATCAGTAAATTCTATACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0002229 GO:0002239 GO:0002831 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005769 GO:0005783 GO:0005794 GO:0005798 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009787 GO:0009788 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010648 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031982 GO:0031984 GO:0032101 GO:0032147 GO:0032268 GO:0032270 GO:0033674 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043900 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097708 GO:0098542 GO:0098588 GO:0098791 GO:0098805 GO:0140096 GO:1900150 GO:1900424 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1902531 GO:1902533 GO:1905957 GO:1905958 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

950

Amino Acids

104.46

Weight (kDa)

5.95

Isoelectric Point (pI)

45.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 139 - 342 3.7e-70 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 684 - 859 1.4e-39 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 685 - 863 1.8e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1364
AasI GACNNNNNNGTC 1 cut(s) 677
AatII GACGTC 1 cut(s) 140
Acc36I ACCTGC 1 cut(s) 1364
AccB7I CCANNNNNTGG 1 cut(s) 1151
AccI GTMKAC 4 cut(s) 224, 910, 1567, 2091
AccII CGCG 3 cut(s) 68, 430, 2485
AccIII TCCGGA 1 cut(s) 328
AcsI RAATTY 4 cut(s) 307, 616, 1336, 2836
AcuI CTGAAG 4 cut(s) 1520, 1674, 1949, 2571
AcyI GRCGYC 2 cut(s) 137, 179
AfaI GTAC 6 cut(s) 822, 882, 1026, 1346, 2187, 2395
AfeI AGCGCT 1 cut(s) 301
AfiI CCNNNNNNNGG 7 cut(s) 203, 429, 1151, 2143, 2230, 2284, 2772
AflII CTTAAG 1 cut(s) 917
AflIII ACRYGT 1 cut(s) 2243
AgeI ACCGGT 1 cut(s) 1510
AhlI ACTAGT 1 cut(s) 815
AjiI CACGTC 1 cut(s) 2246
AjnI CCWGG 5 cut(s) 1012, 1483, 1729, 1808, 2046
AjuI GAANNNNNNNTTGG 2 cut(s) 546, 578
Alw21I GWGCWC 1 cut(s) 2810
Alw26I GTCTC 3 cut(s) 413, 854, 2430
Ama87I CYCGRG 2 cut(s) 2152, 2803
Aor13HI TCCGGA 1 cut(s) 328
Aor51HI AGCGCT 1 cut(s) 301
AoxI GGCC 3 cut(s) 63, 90, 740
ApeKI GCWGC 4 cut(s) 358, 1164, 2159, 2770
ApoI RAATTY 4 cut(s) 307, 616, 1336, 2836
AsiGI ACCGGT 1 cut(s) 1510
Asp700I GAANNNNTTC 4 cut(s) 620, 1233, 1533, 2132
AspA2I CCTAGG 1 cut(s) 1132
AspLEI GCGC 4 cut(s) 302, 454, 2487, 2730
AspS9I GGNCC 6 cut(s) 277, 740, 1136, 1435, 1481, 2797
AsuC2I CCSGG 2 cut(s) 347, 2414
AsuHPI GGTGA 9 cut(s) 87, 107, 673, 1388, 2033, 2137, 2480, 2538, 2802
AsuII TTCGAA 2 cut(s) 305, 1332
AvaI CYCGRG 2 cut(s) 2152, 2803
AvaII GGWCC 5 cut(s) 277, 1136, 1435, 1481, 2797
AvrII CCTAGG 1 cut(s) 1132
BaeI ACNNNNGTAYC 2 cut(s) 1008, 1041
BamHI GGATCC 3 cut(s) 381, 833, 1933
BanII GRGCYC 3 cut(s) 1369, 1816, 2810
BbsI GAAGAC 4 cut(s) 162, 381, 1213, 2049
Bbv12I GWGCWC 1 cut(s) 2810
BbvCI CCTCAGC 1 cut(s) 942
BbvI GCAGC 4 cut(s) 345, 1176, 2146, 2782
BceAI ACGGC 1 cut(s) 1051
BciT130I CCWGG 5 cut(s) 1014, 1485, 1731, 1810, 2048
BcnI CCSGG 2 cut(s) 347, 2414
BcoDI GTCTC 3 cut(s) 413, 854, 2430
BcuI ACTAGT 1 cut(s) 815
BfaI CTAG 8 cut(s) 455, 816, 884, 1133, 1884, 1992, 2072, 2138
BfmI CTRYAG 2 cut(s) 907, 1176
BfoI RGCGCY 1 cut(s) 303
BfrI CTTAAG 1 cut(s) 917
BfuAI ACCTGC 1 cut(s) 1364
BglI GCCNNNNNGGC 1 cut(s) 71
BlnI CCTAGG 1 cut(s) 1132
BlpI GCTNAGC 1 cut(s) 362
Bme1390I CCNGG 7 cut(s) 347, 1014, 1485, 1731, 1810, 2048, 2414
Bme18I GGWCC 5 cut(s) 277, 1136, 1435, 1481, 2797
BmeT110I CYCGRG 2 cut(s) 2152, 2803
BmgBI CACGTC 1 cut(s) 2246
BmgT120I GGNCC 6 cut(s) 277, 740, 1136, 1435, 1481, 2797
BmiI GGNNCC 6 cut(s) 383, 835, 1437, 1815, 1873, 1935
BmrFI CCNGG 7 cut(s) 347, 1014, 1485, 1731, 1810, 2048, 2414
BmsI GCATC 6 cut(s) 742, 891, 1586, 1650, 1771, 1834
BoxI GACNNNNGTC 1 cut(s) 2405
BpiI GAAGAC 4 cut(s) 162, 381, 1213, 2049
BplI GAGNNNNNCTC 2 cut(s) 2797, 2829
BpmI CTGGAG 1 cut(s) 1220
Bpu10I CCTNAGC 1 cut(s) 942
Bpu1102I GCTNAGC 1 cut(s) 362
Bpu14I TTCGAA 2 cut(s) 305, 1332
BpuEI CTTGAG 2 cut(s) 2675, 2744
BpuMI CCSGG 2 cut(s) 347, 2414
Bsa29I ATCGAT 2 cut(s) 610, 1113
BsaAI YACGTR 1 cut(s) 1851
BsaHI GRCGYC 2 cut(s) 137, 179
BsaI GGTCTC 2 cut(s) 413, 854
BsaWI WCCGGW 4 cut(s) 128, 244, 328, 1510
BsaXI ACNNNNNCTCC 6 cut(s) 410, 440, 2191, 2221, 2233, 2263
Bsc4I CCNNNNNNNGG 7 cut(s) 203, 429, 1151, 2143, 2230, 2284, 2772
Bse118I RCCGGY 2 cut(s) 196, 1510
Bse1I ACTGG 4 cut(s) 385, 940, 2391, 2456
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 5 cut(s) 1014, 1485, 1731, 1810, 2048
BseCI ATCGAT 2 cut(s) 610, 1113
BseGI GGATG 9 cut(s) 80, 328, 757, 783, 982, 1398, 2014, 2209, 2547
BseLI CCNNNNNNNGG 7 cut(s) 203, 429, 1151, 2143, 2230, 2284, 2772
BseMII CTCAG 8 cut(s) 353, 933, 1260, 1316, 1422, 2160, 2526, 2754
BseNI ACTGG 4 cut(s) 385, 940, 2391, 2456
BseRI GAGGAG 2 cut(s) 281, 479
BseXI GCAGC 4 cut(s) 345, 1176, 2146, 2782
BseYI CCCAGC 1 cut(s) 200
BsgI GTGCAG 2 cut(s) 972, 2649
Bsh1236I CGCG 3 cut(s) 68, 430, 2485
Bsh1285I CGRYCG 4 cut(s) 56, 192, 245, 614
BshFI GGCC 3 cut(s) 65, 92, 742
BshTI ACCGGT 1 cut(s) 1510
BshVI ATCGAT 2 cut(s) 610, 1113
BsiEI CGRYCG 4 cut(s) 56, 192, 245, 614
BsiHKAI GWGCWC 1 cut(s) 2810
BsiHKCI CYCGRG 2 cut(s) 2152, 2803
BslFI GGGAC 1 cut(s) 1601
BslI CCNNNNNNNGG 7 cut(s) 203, 429, 1151, 2143, 2230, 2284, 2772
BsmAI GTCTC 3 cut(s) 413, 854, 2430
BsmFI GGGAC 1 cut(s) 1601
BsnI GGCC 3 cut(s) 65, 92, 742
Bso31I GGTCTC 2 cut(s) 413, 854
BsoBI CYCGRG 2 cut(s) 2152, 2803
Bsp119I TTCGAA 2 cut(s) 305, 1332
Bsp1286I GDGCHC 3 cut(s) 1369, 1816, 2810
Bsp13I TCCGGA 1 cut(s) 328
Bsp1720I GCTNAGC 1 cut(s) 362
Bsp19I CCATGG 1 cut(s) 2036
BspANI GGCC 3 cut(s) 65, 92, 742
BspCNI CTCAG 8 cut(s) 354, 934, 1259, 1315, 1423, 2161, 2527, 2753
BspDI ATCGAT 2 cut(s) 610, 1113
BspEI TCCGGA 1 cut(s) 328
BspFNI CGCG 3 cut(s) 68, 430, 2485
BspLI GGNNCC 6 cut(s) 383, 835, 1437, 1815, 1873, 1935
BspMAI CTGCAG 1 cut(s) 1180
BspMI ACCTGC 1 cut(s) 1364
BspQI GCTCTTC 1 cut(s) 1524
BspT104I TTCGAA 2 cut(s) 305, 1332
BspTI CTTAAG 1 cut(s) 917
BspTNI GGTCTC 2 cut(s) 413, 854
BsrFI RCCGGY 2 cut(s) 196, 1510
BsrI ACTGG 4 cut(s) 385, 940, 2391, 2456
BssAI RCCGGY 2 cut(s) 196, 1510
BssNAI GTATAC 1 cut(s) 2092
BssNI GRCGYC 2 cut(s) 137, 179
BssT1I CCWWGG 5 cut(s) 562, 1132, 2036, 2282, 2664
Bst1107I GTATAC 1 cut(s) 2092
Bst2UI CCWGG 5 cut(s) 1014, 1485, 1731, 1810, 2048
Bst6I CTCTTC 3 cut(s) 258, 630, 1524
BstACI GRCGYC 2 cut(s) 137, 179
BstAFI CTTAAG 1 cut(s) 917
BstBAI YACGTR 1 cut(s) 1851
BstBI TTCGAA 2 cut(s) 305, 1332
BstC8I GCNNGC 6 cut(s) 105, 198, 285, 711, 2384, 2388
BstDEI CTNAG 8 cut(s) 362, 942, 1246, 1302, 1431, 2169, 2535, 2740
BstDSI CCRYGG 3 cut(s) 66, 87, 2036
BstENI CCTNNNNNAGG 1 cut(s) 2141
BstF5I GGATG 9 cut(s) 80, 328, 757, 783, 982, 1398, 2014, 2209, 2547
BstFNI CGCG 3 cut(s) 68, 430, 2485
BstH2I RGCGCY 1 cut(s) 303
BstHHI GCGC 4 cut(s) 302, 454, 2487, 2730
BstMAI GTCTC 3 cut(s) 413, 854, 2430
BstMCI CGRYCG 4 cut(s) 56, 192, 245, 614
BstMWI GCNNNNNNNGC 6 cut(s) 71, 299, 372, 2165, 2203, 2770
BstNI CCWGG 5 cut(s) 1014, 1485, 1731, 1810, 2048
BstNSI RCATGY 1 cut(s) 2390
BstPAI GACNNNNGTC 1 cut(s) 2405
BstSCI CCNGG 7 cut(s) 345, 1012, 1483, 1729, 1808, 2046, 2412
BstSFI CTRYAG 2 cut(s) 907, 1176
BstSNI TACGTA 1 cut(s) 1851
BstUI CGCG 3 cut(s) 68, 430, 2485
BstV1I GCAGC 4 cut(s) 345, 1176, 2146, 2782
BstV2I GAAGAC 4 cut(s) 162, 381, 1213, 2049
BstX2I RGATCY 6 cut(s) 342, 381, 833, 997, 1933, 2658
BstYI RGATCY 6 cut(s) 342, 381, 833, 997, 1933, 2658
BstZ17I GTATAC 1 cut(s) 2092
Bsu15I ATCGAT 2 cut(s) 610, 1113
BsuRI GGCC 3 cut(s) 65, 92, 742
BsuTUI ATCGAT 2 cut(s) 610, 1113
BtgI CCRYGG 3 cut(s) 66, 87, 2036
BtgZI GCGATG 1 cut(s) 1794
BtrI CACGTC 1 cut(s) 2246
BtsCI GGATG 9 cut(s) 80, 328, 757, 783, 982, 1398, 2014, 2209, 2547
BtsI GCAGTG 1 cut(s) 2637
BtsIMutI CAGTG 6 cut(s) 213, 624, 662, 933, 1270, 2637
BveI ACCTGC 1 cut(s) 1364
Cac8I GCNNGC 6 cut(s) 105, 198, 285, 711, 2384, 2388
CfoI GCGC 4 cut(s) 302, 454, 2487, 2730
Cfr10I RCCGGY 2 cut(s) 196, 1510
Cfr13I GGNCC 6 cut(s) 277, 740, 1136, 1435, 1481, 2797
Cfr42I CCGCGG 1 cut(s) 69
ClaI ATCGAT 2 cut(s) 610, 1113
CseI GACGC 3 cut(s) 187, 364, 2195
CsiI ACCWGGT 1 cut(s) 2046
Csp6I GTAC 6 cut(s) 821, 881, 1025, 1345, 2186, 2394
CspAI ACCGGT 1 cut(s) 1510
CspCI CAANNNNNGTGG 2 cut(s) 1714, 1749
CviAII CATG 9 cut(s) 1151, 1370, 1877, 1898, 2037, 2096, 2108, 2230, 2387
CviQI GTAC 6 cut(s) 821, 881, 1025, 1345, 2186, 2394
DdeI CTNAG 8 cut(s) 362, 942, 1246, 1302, 1431, 2169, 2535, 2740
DrdI GACNNNNNNGTC 1 cut(s) 677
DseDI GACNNNNNNGTC 1 cut(s) 677
Eam1104I CTCTTC 3 cut(s) 258, 630, 1524
EarI CTCTTC 3 cut(s) 258, 630, 1524
EciI GGCGGA 1 cut(s) 431
Ecl136II GAGCTC 1 cut(s) 2808
Eco105I TACGTA 1 cut(s) 1851
Eco130I CCWWGG 5 cut(s) 562, 1132, 2036, 2282, 2664
Eco24I GRGCYC 3 cut(s) 1369, 1816, 2810
Eco31I GGTCTC 2 cut(s) 413, 854
Eco32I GATATC 1 cut(s) 1123
Eco47I GGWCC 5 cut(s) 277, 1136, 1435, 1481, 2797
Eco47III AGCGCT 1 cut(s) 301
Eco53kI GAGCTC 1 cut(s) 2808
Eco57I CTGAAG 4 cut(s) 1520, 1674, 1949, 2571
Eco88I CYCGRG 2 cut(s) 2152, 2803
EcoICRI GAGCTC 1 cut(s) 2808
EcoNI CCTNNNNNAGG 1 cut(s) 2141
EcoO109I RGGNCCY 2 cut(s) 1435, 1481
EcoRI GAATTC 2 cut(s) 307, 616
EcoRII CCWGG 5 cut(s) 1012, 1483, 1729, 1808, 2046
EcoRV GATATC 1 cut(s) 1123
EcoT14I CCWWGG 5 cut(s) 562, 1132, 2036, 2282, 2664
EcoT38I GRGCYC 3 cut(s) 1369, 1816, 2810
ErhI CCWWGG 5 cut(s) 562, 1132, 2036, 2282, 2664
FaeI CATG 9 cut(s) 1154, 1373, 1880, 1901, 2040, 2099, 2111, 2233, 2390
FalI AAGNNNNNCTT 2 cut(s) 546, 578
FaqI GGGAC 1 cut(s) 1601
FatI CATG 9 cut(s) 1150, 1369, 1876, 1897, 2036, 2095, 2107, 2229, 2386
FauNDI CATATG 1 cut(s) 2080
FblI GTMKAC 4 cut(s) 224, 910, 1567, 2091
FokI GGATG 9 cut(s) 67, 335, 764, 790, 989, 1405, 2021, 2196, 2554
FriOI GRGCYC 3 cut(s) 1369, 1816, 2810
FspBI CTAG 8 cut(s) 455, 816, 884, 1133, 1884, 1992, 2072, 2138
GlaI GCGC 4 cut(s) 301, 453, 2486, 2729
GsaI CCCAGC 1 cut(s) 204
GsuI CTGGAG 1 cut(s) 1220
HaeII RGCGCY 1 cut(s) 303
HaeIII GGCC 3 cut(s) 65, 92, 742
HgaI GACGC 3 cut(s) 187, 364, 2195
HhaI GCGC 4 cut(s) 302, 454, 2487, 2730
Hin1I GRCGYC 2 cut(s) 137, 179
Hin1II CATG 9 cut(s) 1154, 1373, 1880, 1901, 2040, 2099, 2111, 2233, 2390
Hin6I GCGC 4 cut(s) 300, 452, 2485, 2728
HinP1I GCGC 4 cut(s) 300, 452, 2485, 2728
HincII GTYRAC 3 cut(s) 225, 1568, 2014
HindII GTYRAC 3 cut(s) 225, 1568, 2014
HindIII AAGCTT 2 cut(s) 20, 1491
HinfI GANTC 8 cut(s) 157, 221, 512, 1229, 1357, 1913, 1961, 2644
HphI GGTGA 9 cut(s) 87, 107, 673, 1388, 2033, 2137, 2480, 2538, 2802
Hpy99I CGWCG 9 cut(s) 103, 169, 181, 229, 232, 358, 2404, 2624, 2652
HpyAV CCTTC 6 cut(s) 171, 328, 1339, 1924, 2288, 2455
HpyCH4IV ACGT 6 cut(s) 137, 730, 1850, 2016, 2245, 2338
HpyF10VI GCNNNNNNNGC 6 cut(s) 71, 299, 372, 2165, 2203, 2770
HpyF3I CTNAG 8 cut(s) 362, 942, 1246, 1302, 1431, 2169, 2535, 2740
HpySE526I ACGT 6 cut(s) 137, 730, 1850, 2016, 2245, 2338
Hsp92I GRCGYC 2 cut(s) 137, 179
Hsp92II CATG 9 cut(s) 1154, 1373, 1880, 1901, 2040, 2099, 2111, 2233, 2390
HspAI GCGC 4 cut(s) 300, 452, 2485, 2728
Kpn2I TCCGGA 1 cut(s) 328
KroI GCCGGC 1 cut(s) 196
KroNI GCCGGC 1 cut(s) 198
KspI CCGCGG 1 cut(s) 69
LguI GCTCTTC 1 cut(s) 1524
LmnI GCTCC 2 cut(s) 154, 1819
Lsp1109I GCAGC 4 cut(s) 345, 1176, 2146, 2782
LweI GCATC 6 cut(s) 742, 891, 1586, 1650, 1771, 1834
MabI ACCWGGT 1 cut(s) 2046
MaeI CTAG 8 cut(s) 455, 816, 884, 1133, 1884, 1992, 2072, 2138
MaeII ACGT 6 cut(s) 137, 730, 1850, 2016, 2245, 2338
MaeIII GTNAC 7 cut(s) 679, 1259, 1673, 1946, 2239, 2544, 2587
MflI RGATCY 6 cut(s) 342, 381, 833, 997, 1933, 2658
MhlI GDGCHC 3 cut(s) 1369, 1816, 2810
MlyI GAGTC 2 cut(s) 166, 230
MmeI TCCRAC 3 cut(s) 240, 951, 1262
MroI TCCGGA 1 cut(s) 328
MroNI GCCGGC 1 cut(s) 196
MroXI GAANNNNTTC 4 cut(s) 620, 1233, 1533, 2132
MseI TTAA 6 cut(s) 918, 957, 1062, 1461, 1596, 1794
MslI CAYNNNNRTG 2 cut(s) 1374, 1585
MspA1I CMGCKG 2 cut(s) 68, 2773
MspCI CTTAAG 1 cut(s) 917
MspR9I CCNGG 7 cut(s) 347, 1014, 1485, 1731, 1810, 2048, 2414
MvaI CCWGG 5 cut(s) 1014, 1485, 1731, 1810, 2048
MvnI CGCG 3 cut(s) 68, 430, 2485
MwoI GCNNNNNNNGC 6 cut(s) 71, 299, 372, 2165, 2203, 2770
NaeI GCCGGC 1 cut(s) 198
NciI CCSGG 2 cut(s) 347, 2414
NcoI CCATGG 1 cut(s) 2036
NdeI CATATG 1 cut(s) 2080
NgoMIV GCCGGC 1 cut(s) 196
NlaIII CATG 9 cut(s) 1154, 1373, 1880, 1901, 2040, 2099, 2111, 2233, 2390
NlaIV GGNNCC 6 cut(s) 383, 835, 1437, 1815, 1873, 1935
NmuCI GTSAC 3 cut(s) 679, 1259, 2544
NspI RCATGY 1 cut(s) 2390
NspV TTCGAA 2 cut(s) 305, 1332
PaeI GCATGC 1 cut(s) 2390
PaqCI CACCTGC 1 cut(s) 1364
PasI CCCWGGG 1 cut(s) 1809
PciSI GCTCTTC 1 cut(s) 1524
PcsI WCGNNNNNNNCGW 2 cut(s) 173, 185
PdiI GCCGGC 1 cut(s) 198
PdmI GAANNNNTTC 4 cut(s) 620, 1233, 1533, 2132
PfeI GAWTC 6 cut(s) 512, 1229, 1357, 1913, 1961, 2644
PflFI GACNNNGTC 1 cut(s) 424
PflMI CCANNNNNTGG 1 cut(s) 1151
PfoI TCCNGGA 1 cut(s) 1012
PinAI ACCGGT 1 cut(s) 1510
Ple19I CGATCG 2 cut(s) 56, 614
PleI GAGTC 2 cut(s) 165, 229
PpsI GAGTC 2 cut(s) 165, 229
Ppu21I YACGTR 1 cut(s) 1851
PpuMI RGGWCCY 2 cut(s) 1435, 1481
PshAI GACNNNNGTC 1 cut(s) 2405
Psp124BI GAGCTC 1 cut(s) 2810
Psp5II RGGWCCY 2 cut(s) 1435, 1481
Psp6I CCWGG 5 cut(s) 1012, 1483, 1729, 1808, 2046
PspFI CCCAGC 1 cut(s) 200
PspGI CCWGG 5 cut(s) 1012, 1483, 1729, 1808, 2046
PspN4I GGNNCC 6 cut(s) 383, 835, 1437, 1815, 1873, 1935
PspPI GGNCC 6 cut(s) 277, 740, 1136, 1435, 1481, 2797
PspPPI RGGWCCY 2 cut(s) 1435, 1481
PsrI GAACNNNNNNTAC 2 cut(s) 1392, 1424
PstI CTGCAG 1 cut(s) 1180
PsuI RGATCY 6 cut(s) 342, 381, 833, 997, 1933, 2658
PsyI GACNNNGTC 1 cut(s) 424
PvuI CGATCG 2 cut(s) 56, 614
RsaI GTAC 6 cut(s) 822, 882, 1026, 1346, 2187, 2395
RsaNI GTAC 6 cut(s) 821, 881, 1025, 1345, 2186, 2394
RseI CAYNNNNRTG 2 cut(s) 1374, 1585
SacI GAGCTC 1 cut(s) 2810
SacII CCGCGG 1 cut(s) 69
SalI GTCGAC 2 cut(s) 223, 1566
SapI GCTCTTC 1 cut(s) 1524
SaqAI TTAA 6 cut(s) 918, 957, 1062, 1461, 1596, 1794
Sau96I GGNCC 6 cut(s) 277, 740, 1136, 1435, 1481, 2797
SchI GAGTC 2 cut(s) 166, 230
ScrFI CCNGG 7 cut(s) 347, 1014, 1485, 1731, 1810, 2048, 2414
SduI GDGCHC 3 cut(s) 1369, 1816, 2810
SexAI ACCWGGT 1 cut(s) 2046
SfaNI GCATC 6 cut(s) 742, 891, 1586, 1650, 1771, 1834
SfcI CTRYAG 2 cut(s) 907, 1176
Sfr303I CCGCGG 1 cut(s) 69
SfuI TTCGAA 2 cut(s) 305, 1332
SgrBI CCGCGG 1 cut(s) 69
SinI GGWCC 5 cut(s) 277, 1136, 1435, 1481, 2797
SmiMI CAYNNNNRTG 2 cut(s) 1374, 1585
SmlI CTYRAG 3 cut(s) 917, 2654, 2759
SmoI CTYRAG 3 cut(s) 917, 2654, 2759
SnaBI TACGTA 1 cut(s) 1851
SpeI ACTAGT 1 cut(s) 815
SphI GCATGC 1 cut(s) 2390
SspMI CTAG 8 cut(s) 455, 816, 884, 1133, 1884, 1992, 2072, 2138
SstI GAGCTC 1 cut(s) 2810
StyD4I CCNGG 7 cut(s) 345, 1012, 1483, 1729, 1808, 2046, 2412
StyI CCWWGG 5 cut(s) 562, 1132, 2036, 2282, 2664
TaiI ACGT 6 cut(s) 140, 733, 1853, 2019, 2248, 2341
TaqII GACCGA 1 cut(s) 2729
TatI WGTACW 3 cut(s) 820, 1344, 2393
TauI GCSGC 9 cut(s) 68, 71, 74, 353, 375, 413, 416, 433, 2776
TfiI GAWTC 6 cut(s) 512, 1229, 1357, 1913, 1961, 2644
Tru1I TTAA 6 cut(s) 918, 957, 1062, 1461, 1596, 1794
Tru9I TTAA 6 cut(s) 918, 957, 1062, 1461, 1596, 1794
TscAI CASTG 6 cut(s) 220, 631, 662, 940, 1270, 2637
TseFI GTSAC 3 cut(s) 679, 1259, 2544
TseI GCWGC 4 cut(s) 358, 1164, 2159, 2770
Tsp45I GTSAC 3 cut(s) 679, 1259, 2544
TspGWI ACGGA 3 cut(s) 2129, 2285, 2775
TspRI CASTG 6 cut(s) 220, 631, 662, 940, 1270, 2637
Tth111I GACNNNGTC 1 cut(s) 424
Van91I CCANNNNNTGG 1 cut(s) 1151
Vha464I CTTAAG 1 cut(s) 917
VpaK11BI GGWCC 5 cut(s) 277, 1136, 1435, 1481, 2797
XagI CCTNNNNNAGG 1 cut(s) 2141
XapI RAATTY 4 cut(s) 307, 616, 1336, 2836
XceI RCATGY 1 cut(s) 2390
XmaJI CCTAGG 1 cut(s) 1132
XmiI GTMKAC 4 cut(s) 224, 910, 1567, 2091
XmnI GAANNNNTTC 4 cut(s) 620, 1233, 1533, 2132
XspI CTAG 8 cut(s) 455, 816, 884, 1133, 1884, 1992, 2072, 2138
ZraI GACGTC 1 cut(s) 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.