Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005589

Physical Location & Seq

Genomic Coordinates Forward (+)

2932739 .. 2936586

Gene Structure 3848 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G09090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGCGGGAGGAAGAAATGGAATCTTCGTCAGAAGGTGAGACAAACAAGATTTCCCGATGCAAAGCCACTGGTTCAGACAATCCTGATGAGGACTACGTCGAGATCACACTCGAAGTGCGAGACGAAACCATCAACACAATGAAGGCCAAGGCGACACTTCGTTCGGTTCTTTCCGGGAGGCTGAAAACGATGGTTAAGTCGCTATCGTTTGCTTCACGCCGGCTCGACCGTAGTAAGTCGTTCGGTGCTATGTTTGCTCTTCGAGGGTTGAGGTTCATTGCCAAAAACGACGCCGTTGGTAGAGGCTGGGATGAGGTTGCAATGAGGTTTGATAAGTTGGCCGTTGAAGGGAAACTCCCTAAATCCAAATTTGGACATTGCATAGGAATGGTTGAATCTAGCGAATTTGTGAACGAGCTTTTTGAGGCGTTGGTCCGAAGGAGAGGGACTACGTCATCGTCAATCACCAAAACTGAATTGTTTGAATTCTGGGAGCAGATCACAGGCAATAGTTTTGATGATAGGCTGCAAATCTTTTTTGATATGGTGGACAAAAATTTGGACGGACGTATTACAGGAGATGAGGTTAAGGAGATAATTGCTTTAAGTGCTTCGGCTAACAAGCTATCAAAGATTAAAGAAAATGTAGATGAATATGCTGCCTTGATCATGGAAGAACTAGATCGCGACAACCTCGGATATATTGAGTTACATAACTTGGAAACATTGCTTCTCCAAGTTCCTAGCCAATCAAATAACAGTCCATCTTCCGCGAACAAACGTGCACTCAACAAGATGTTGAGCCAGAAGCTCATACCAACAAAAGATCGAAACCCGGTGAAAAGATTTGCTATGAATATATCATACTTCTTCTTGGAAAATTGGAAAAGGATTTGGGTGTTAACATTGTGGATATCCATTTGCATCACTCTCTTCACTTGGAAATTTCTCCAGTATAAACGCAAAACCGTGTTCGAGGTGATGGGCTACTGTGTTACCGTGGCCAAAGGCAGTGCAGAGACCTTGAAATTCAACATGGCTCTCATTCTCTTGCCCGTTTGTAGGAACACTATCACTTGGCTAAGGACCAAGTCCAAGCTTATTGGGTCTGTTGTTCCATTTGATGACAATATCAATTTCCACAAGGTTGTTGCATTTGGGATCGCGGTTGGAATAGGCTTGCACGCTATATCTCACCTGGCATGTGATTTCCCGCGTTTGCTGCATGCAAAAAATGTAGAGTTTGAGCCAATGAAAAAGTTTTTCGGAGACGAGAGGCCTGAAAATTATGGATGGTTCATGAAAGGGACAGACGGGTGGACCGGTGTTACCATGGTGGTTCTTATGTTAGTGGCCTACGTCTTGGCGCAGTCGTGGTTCAGACGAAACCGGGCAAACCTACCAAAATCGTTGAAACGATTGACTGGTTTCAACGCATTTTGGTACTCACACCATTTGTTTGTCATCGTTTATGTTCTTCTCATCGTGCATGGCTATTTTGTTTATCTCTCAAAGGAATGGTACCACAAGACGACGTGGATGTATCTGGCAGTTCCCGTACTACTATATGCATTTGAACGATTGATTCGTGCATTTAGACCAGGTGCCAAGGCTGTCAAGGTTTTGAAGGTGGCAGTATATCCAGGAAATGTACTTTCACTTTACATGTCGAAGCCTAAAGGTTTCAAGTACACAAGTGGACAGTACATATATATTAACTGTTCTGACGTCTCACCATTACAATGGCATCCGTTTTCAATTACTTCGGCTTCCGGGGATGATTACCTCAGCGTTCATATCCGCACACTCGGAGACTGGACATCGCAACTCAAATCCTTATATTCCAAGGTTACTATTTTTCAAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009791 GO:0009845 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043621 GO:0044464 GO:0046872 GO:0048856 GO:0050664 GO:0050896 GO:0055114 GO:0071944 GO:0090351

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

622

Amino Acids

71.33

Weight (kDa)

9.36

Isoelectric Point (pI)

38.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NADPH_Ox	PF08414	74 - 173	3e-34	Respiratory burst NADPH oxidase
Ferric_reduct	PF01794	346 - 495	5.3e-12	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	537 - 617	2.7e-29	FAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09090 AT1G09090
fragaria_vesca	FvH4_6g06490
prunus_persica	Prupe.6G321500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0455621 RchiOBHm_Chr3g0455641
rosa_laevigata	RLG00000025344 RLG00000025346
rosa_multiflora	Rmu_sc0000223.1_g000005 Rmu_sc0002883.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052210 Rroxscaffold_5G00351700 Rroxscaffold_6G00423640 Rroxscaffold_6G00423670 Rroxscaffold_6G00424140 Rroxscaffold_6G00424160
rosa_rugosa	Rorug03G0008800 Rorug03G0008900
rosa_samantha	Rh3AG068200 Rh3AG068400 Rh3BG070800 Rh3BG070900 Rh3CG069100 Rh3CG069200 Rh3DG070700 Rh3DG070800
rosa_wichuraiana	Rw3G005470 Rw3G005480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1731
Acc65I	GGTACC	1 cut(s)	1521
AccB1I	GGYRCC	2 cut(s)	1521, 1604
AccII	CGCG	4 cut(s)	687, 773, 1166, 1216
AciI	CCGC	5 cut(s)	4, 771, 1166, 1214, 1801
AclWI	GGATC	1 cut(s)	1169
AcoI	YGGCCR	2 cut(s)	339, 1002
AcsI	RAATTY	6 cut(s)	368, 404, 485, 556, 944, 1028
AcyI	GRCGYC	2 cut(s)	291, 1728
AfaI	GTAC	6 cut(s)	1445, 1523, 1560, 1653, 1691, 1706
AfiI	CCNNNNNNNGG	2 cut(s)	348, 1062
AflIII	ACRYGT	1 cut(s)	1665
AgeI	ACCGGT	1 cut(s)	1322
AjiI	CACGTC	1 cut(s)	1536
AjnI	CCWGG	3 cut(s)	1197, 1600, 1642
AluBI	AGCT	4 cut(s)	418, 625, 811, 1099
AluI	AGCT	4 cut(s)	418, 625, 811, 1099
Alw21I	GWGCWC	1 cut(s)	787
Alw26I	GTCTC	6 cut(s)	32, 114, 1013, 1263, 1735, 1806
Alw44I	GTGCAC	1 cut(s)	783
AlwI	GGATC	1 cut(s)	1169
AoxI	GGCC	5 cut(s)	144, 339, 1002, 1277, 1353
ApaLI	GTGCAC	1 cut(s)	783
ApeKI	GCWGC	3 cut(s)	526, 659, 1222
ApoI	RAATTY	6 cut(s)	368, 404, 485, 556, 944, 1028
ArsI	GACNNNNNNTTYG	2 cut(s)	145, 177
AsiGI	ACCGGT	1 cut(s)	1322
Asp718I	GGTACC	1 cut(s)	1521
AspLEI	GCGC	1 cut(s)	1369
AspS9I	GGNCC	3 cut(s)	433, 1086, 1320
AsuC2I	CCSGG	4 cut(s)	175, 836, 1391, 1774
AsuHPI	GGTGA	6 cut(s)	47, 457, 850, 991, 1187, 1725
AvaII	GGWCC	3 cut(s)	433, 1086, 1320
BaeGI	GKGCMC	1 cut(s)	787
BalI	TGGCCA	1 cut(s)	1004
BanI	GGYRCC	2 cut(s)	1521, 1604
Bbv12I	GWGCWC	1 cut(s)	787
BbvCI	CCTCAGC	1 cut(s)	1787
BbvI	GCAGC	3 cut(s)	513, 646, 1209
BccI	CCATC	5 cut(s)	137, 184, 772, 976, 1287
BceAI	ACGGC	2 cut(s)	278, 326
BciT130I	CCWGG	3 cut(s)	1199, 1602, 1644
BclI	TGATCA	1 cut(s)	666
BcnI	CCSGG	4 cut(s)	175, 836, 1391, 1774
BcoDI	GTCTC	6 cut(s)	32, 114, 1013, 1263, 1735, 1806
BfaI	CTAG	3 cut(s)	399, 680, 744
BisI	GCNGC	3 cut(s)	527, 660, 1223
BlsI	GCNGC	3 cut(s)	528, 661, 1224
Bme1390I	CCNGG	7 cut(s)	175, 836, 1199, 1391, 1602, 1644, 1774
Bme18I	GGWCC	3 cut(s)	433, 1086, 1320
BmgBI	CACGTC	1 cut(s)	1536
BmgT120I	GGNCC	3 cut(s)	433, 1086, 1320
BmiI	GGNNCC	2 cut(s)	1523, 1606
BmrFI	CCNGG	7 cut(s)	175, 836, 1199, 1391, 1602, 1644, 1774
BmsI	GCATC	3 cut(s)	47, 933, 1756
BpmI	CTGGAG	1 cut(s)	935
Bpu10I	CCTNAGC	2 cut(s)	1082, 1787
BpuMI	CCSGG	4 cut(s)	175, 836, 1391, 1774
BsaHI	GRCGYC	2 cut(s)	291, 1728
BsaI	GGTCTC	1 cut(s)	1013
BsaJI	CCNNGG	7 cut(s)	147, 694, 999, 1332, 1608, 1773, 1845
BsaWI	WCCGGW	1 cut(s)	1322
BsaXI	ACNNNNNCTCC	2 cut(s)	570, 600
Bsc4I	CCNNNNNNNGG	2 cut(s)	348, 1062
Bse118I	RCCGGY	2 cut(s)	219, 1322
Bse1I	ACTGG	4 cut(s)	73, 952, 1429, 1820
Bse3DI	GCAATG	4 cut(s)	276, 327, 376, 725
BseBI	CCWGG	3 cut(s)	1199, 1602, 1644
BseDI	CCNNGG	7 cut(s)	147, 694, 999, 1332, 1608, 1773, 1845
BseGI	GGATG	5 cut(s)	316, 1298, 1545, 1747, 1783
BseLI	CCNNNNNNNGG	2 cut(s)	348, 1062
BseMI	GCAATG	4 cut(s)	276, 327, 376, 725
BseMII	CTCAG	1 cut(s)	1801
BseNI	ACTGG	4 cut(s)	73, 952, 1429, 1820
BseSI	GKGCMC	1 cut(s)	787
BseXI	GCAGC	3 cut(s)	513, 646, 1209
BseYI	CCCAGC	1 cut(s)	306
BsgI	GTGCAG	1 cut(s)	1035
Bsh1236I	CGCG	4 cut(s)	687, 773, 1166, 1216
Bsh1285I	CGRYCG	1 cut(s)	229
BshFI	GGCC	5 cut(s)	146, 341, 1004, 1279, 1355
BshNI	GGYRCC	2 cut(s)	1521, 1604
BshTI	ACCGGT	1 cut(s)	1322
BsiEI	CGRYCG	1 cut(s)	229
BsiHKAI	GWGCWC	1 cut(s)	787
BsiSI	CCGG	6 cut(s)	174, 220, 836, 1323, 1390, 1773
BslFI	GGGAC	2 cut(s)	460, 1321
BslI	CCNNNNNNNGG	2 cut(s)	348, 1062
BsmAI	GTCTC	6 cut(s)	32, 114, 1013, 1263, 1735, 1806
BsmBI	CGTCTC	3 cut(s)	114, 1263, 1735
BsmFI	GGGAC	2 cut(s)	460, 1321
BsnI	GGCC	5 cut(s)	146, 341, 1004, 1279, 1355
Bso31I	GGTCTC	1 cut(s)	1013
Bsp1286I	GDGCHC	1 cut(s)	787
Bsp143I	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
Bsp19I	CCATGG	1 cut(s)	1332
Bsp68I	TCGCGA	1 cut(s)	687
BspACI	CCGC	5 cut(s)	4, 771, 1166, 1214, 1801
BspANI	GGCC	5 cut(s)	146, 341, 1004, 1279, 1355
BspCNI	CTCAG	1 cut(s)	1800
BspFNI	CGCG	4 cut(s)	687, 773, 1166, 1216
BspHI	TCATGA	1 cut(s)	1299
BspLI	GGNNCC	2 cut(s)	1523, 1606
BspPI	GGATC	1 cut(s)	1169
BspQI	GCTCTTC	1 cut(s)	264
BspT107I	GGYRCC	2 cut(s)	1521, 1604
BspTNI	GGTCTC	1 cut(s)	1013
BsrDI	GCAATG	4 cut(s)	276, 327, 376, 725
BsrFI	RCCGGY	2 cut(s)	219, 1322
BsrI	ACTGG	4 cut(s)	73, 952, 1429, 1820
BssAI	RCCGGY	2 cut(s)	219, 1322
BssECI	CCNNGG	7 cut(s)	147, 694, 999, 1332, 1608, 1773, 1845
BssMI	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
BssNI	GRCGYC	2 cut(s)	291, 1728
BssT1I	CCWWGG	4 cut(s)	147, 1332, 1608, 1845
Bst2UI	CCWGG	3 cut(s)	1199, 1602, 1644
Bst4CI	ACNGT	7 cut(s)	230, 761, 970, 992, 1000, 1704, 1721
Bst6I	CTCTTC	2 cut(s)	264, 938
BstACI	GRCGYC	2 cut(s)	291, 1728
BstC8I	GCNNGC	4 cut(s)	221, 1181, 1185, 1227
BstDEI	CTNAG	2 cut(s)	1082, 1787
BstDSI	CCRYGG	2 cut(s)	999, 1332
BstF5I	GGATG	5 cut(s)	316, 1298, 1545, 1747, 1783
BstFNI	CGCG	4 cut(s)	687, 773, 1166, 1216
BstHHI	GCGC	1 cut(s)	1369
BstKTI	GATC	6 cut(s)	105, 501, 669, 685, 829, 1164
BstMAI	GTCTC	6 cut(s)	32, 114, 1013, 1263, 1735, 1806
BstMBI	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
BstMCI	CGRYCG	1 cut(s)	229
BstMWI	GCNNNNNNNGC	3 cut(s)	254, 608, 1222
BstNI	CCWGG	3 cut(s)	1199, 1602, 1644
BstNSI	RCATGY	3 cut(s)	1206, 1229, 1669
BstSCI	CCNGG	7 cut(s)	173, 834, 1197, 1389, 1600, 1642, 1772
BstSLI	GKGCMC	1 cut(s)	787
BstUI	CGCG	4 cut(s)	687, 773, 1166, 1216
BstV1I	GCAGC	3 cut(s)	513, 646, 1209
BstXI	CCANNNNNNTGG	1 cut(s)	1743
BsuRI	GGCC	5 cut(s)	146, 341, 1004, 1279, 1355
BtgI	CCRYGG	2 cut(s)	999, 1332
BtgZI	GCGATG	1 cut(s)	1806
BtrI	CACGTC	1 cut(s)	1536
BtsCI	GGATG	5 cut(s)	316, 1298, 1545, 1747, 1783
BtsI	GCAGTG	1 cut(s)	1018
BtsIMutI	CAGTG	2 cut(s)	66, 1018
BtuMI	TCGCGA	1 cut(s)	687
Cac8I	GCNNGC	4 cut(s)	221, 1181, 1185, 1227
CciI	TCATGA	1 cut(s)	1299
CfoI	GCGC	1 cut(s)	1369
Cfr10I	RCCGGY	2 cut(s)	219, 1322
Cfr13I	GGNCC	3 cut(s)	433, 1086, 1320
CseI	GACGC	1 cut(s)	299
CsiI	ACCWGGT	1 cut(s)	1600
Csp6I	GTAC	6 cut(s)	1444, 1522, 1559, 1652, 1690, 1705
CspAI	ACCGGT	1 cut(s)	1322
CviAII	CATG	8 cut(s)	670, 1036, 1203, 1226, 1300, 1333, 1490, 1666
CviQI	GTAC	6 cut(s)	1444, 1522, 1559, 1652, 1690, 1705
DdeI	CTNAG	2 cut(s)	1082, 1787
DpnI	GATC	6 cut(s)	104, 500, 668, 684, 828, 1163
DpnII	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
EaeI	YGGCCR	2 cut(s)	339, 1002
Eam1104I	CTCTTC	2 cut(s)	264, 938
EarI	CTCTTC	2 cut(s)	264, 938
Eco130I	CCWWGG	4 cut(s)	147, 1332, 1608, 1845
Eco147I	AGGCCT	1 cut(s)	1279
Eco31I	GGTCTC	1 cut(s)	1013
Eco32I	GATATC	1 cut(s)	915
Eco47I	GGWCC	3 cut(s)	433, 1086, 1320
EcoRI	GAATTC	1 cut(s)	485
EcoRII	CCWGG	3 cut(s)	1197, 1600, 1642
EcoRV	GATATC	1 cut(s)	915
EcoT14I	CCWWGG	4 cut(s)	147, 1332, 1608, 1845
EcoT22I	ATGCAT	1 cut(s)	1573
ErhI	CCWWGG	4 cut(s)	147, 1332, 1608, 1845
Esp3I	CGTCTC	3 cut(s)	114, 1263, 1735
FaeI	CATG	8 cut(s)	673, 1039, 1206, 1229, 1303, 1336, 1493, 1669
FaqI	GGGAC	2 cut(s)	460, 1321
FatI	CATG	8 cut(s)	669, 1035, 1202, 1225, 1299, 1332, 1489, 1665
FauI	CCCGC	1 cut(s)	1221
FbaI	TGATCA	1 cut(s)	666
Fnu4HI	GCNGC	3 cut(s)	527, 660, 1223
FokI	GGATG	5 cut(s)	323, 1305, 1552, 1734, 1790
Fsp4HI	GCNGC	3 cut(s)	527, 660, 1223
FspBI	CTAG	3 cut(s)	399, 680, 744
GlaI	GCGC	1 cut(s)	1368
GluI	GCNGC	3 cut(s)	527, 660, 1223
GsaI	CCCAGC	1 cut(s)	310
GsuI	CTGGAG	1 cut(s)	935
HaeIII	GGCC	5 cut(s)	146, 341, 1004, 1279, 1355
HapII	CCGG	6 cut(s)	174, 220, 836, 1323, 1390, 1773
HgaI	GACGC	1 cut(s)	299
HhaI	GCGC	1 cut(s)	1369
Hin1I	GRCGYC	2 cut(s)	291, 1728
Hin1II	CATG	8 cut(s)	673, 1039, 1206, 1229, 1303, 1336, 1493, 1669
Hin6I	GCGC	1 cut(s)	1367
HinP1I	GCGC	1 cut(s)	1367
HincII	GTYRAC	1 cut(s)	903
HindII	GTYRAC	1 cut(s)	903
HindIII	AAGCTT	1 cut(s)	1097
HinfI	GANTC	3 cut(s)	20, 395, 1585
HpaI	GTTAAC	1 cut(s)	903
HpaII	CCGG	6 cut(s)	174, 220, 836, 1323, 1390, 1773
HphI	GGTGA	6 cut(s)	47, 457, 850, 991, 1187, 1725
Hpy166II	GTNNAC	7 cut(s)	412, 550, 785, 903, 1320, 1692, 1700
Hpy188I	TCNGA	8 cut(s)	31, 76, 437, 698, 1268, 1382, 1726, 1811
Hpy188III	TCNNGA	6 cut(s)	54, 83, 100, 686, 1300, 1862
Hpy8I	GTNNAC	7 cut(s)	412, 550, 785, 903, 1320, 1692, 1700
Hpy99I	CGWCG	3 cut(s)	101, 293, 1537
HpyAV	CCTTC	5 cut(s)	26, 136, 341, 432, 1621
HpyCH4III	ACNGT	7 cut(s)	230, 761, 970, 992, 1000, 1704, 1721
HpyCH4IV	ACGT	7 cut(s)	96, 452, 568, 781, 1359, 1535, 1728
HpyF10VI	GCNNNNNNNGC	3 cut(s)	254, 608, 1222
HpyF3I	CTNAG	2 cut(s)	1082, 1787
HpySE526I	ACGT	7 cut(s)	96, 452, 568, 781, 1359, 1535, 1728
Hsp92I	GRCGYC	2 cut(s)	291, 1728
Hsp92II	CATG	8 cut(s)	673, 1039, 1206, 1229, 1303, 1336, 1493, 1669
HspAI	GCGC	1 cut(s)	1367
KpnI	GGTACC	1 cut(s)	1525
KroI	GCCGGC	1 cut(s)	219
KroNI	GCCGGC	1 cut(s)	221
Ksp22I	TGATCA	1 cut(s)	666
KspAI	GTTAAC	1 cut(s)	903
Kzo9I	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
LguI	GCTCTTC	1 cut(s)	264
LmnI	GCTCC	1 cut(s)	493
Lsp1109I	GCAGC	3 cut(s)	513, 646, 1209
LweI	GCATC	3 cut(s)	47, 933, 1756
MabI	ACCWGGT	1 cut(s)	1600
MaeI	CTAG	3 cut(s)	399, 680, 744
MaeII	ACGT	7 cut(s)	96, 452, 568, 781, 1359, 1535, 1728
MaeIII	GTNAC	4 cut(s)	708, 994, 1327, 1849
MalI	GATC	6 cut(s)	104, 500, 668, 684, 828, 1163
MboI	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
MboII	GAAGA	8 cut(s)	15, 23, 251, 686, 759, 862, 925, 1469
MhlI	GDGCHC	1 cut(s)	787
MlsI	TGGCCA	1 cut(s)	1004
MluNI	TGGCCA	1 cut(s)	1004
MmeI	TCCRAC	1 cut(s)	1150
Mox20I	TGGCCA	1 cut(s)	1004
Mph1103I	ATGCAT	1 cut(s)	1573
MroNI	GCCGGC	1 cut(s)	219
MscI	TGGCCA	1 cut(s)	1004
MseI	TTAA	6 cut(s)	195, 588, 605, 636, 902, 1716
MslI	CAYNNNNRTG	2 cut(s)	386, 1741
Msp20I	TGGCCA	1 cut(s)	1004
MspI	CCGG	6 cut(s)	174, 220, 836, 1323, 1390, 1773
MspR9I	CCNGG	7 cut(s)	175, 836, 1199, 1391, 1602, 1644, 1774
MvaI	CCWGG	3 cut(s)	1199, 1602, 1644
MvnI	CGCG	4 cut(s)	687, 773, 1166, 1216
MwoI	GCNNNNNNNGC	3 cut(s)	254, 608, 1222
NaeI	GCCGGC	1 cut(s)	221
NciI	CCSGG	4 cut(s)	175, 836, 1391, 1774
NcoI	CCATGG	1 cut(s)	1332
NdeII	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
NgoMIV	GCCGGC	1 cut(s)	219
NlaIII	CATG	8 cut(s)	673, 1039, 1206, 1229, 1303, 1336, 1493, 1669
NlaIV	GGNNCC	2 cut(s)	1523, 1606
NruI	TCGCGA	1 cut(s)	687
NsiI	ATGCAT	1 cut(s)	1573
NspI	RCATGY	3 cut(s)	1206, 1229, 1669
PaeI	GCATGC	1 cut(s)	1229
PagI	TCATGA	1 cut(s)	1299
PceI	AGGCCT	1 cut(s)	1279
PciI	ACATGT	1 cut(s)	1665
PciSI	GCTCTTC	1 cut(s)	264
PcsI	WCGNNNNNNNCGW	1 cut(s)	1585
PdiI	GCCGGC	1 cut(s)	221
PfeI	GAWTC	3 cut(s)	20, 395, 1585
PflFI	GACNNNGTC	3 cut(s)	95, 451, 1090
PfoI	TCCNGGA	2 cut(s)	173, 1642
PinAI	ACCGGT	1 cut(s)	1322
PkrI	GCNGC	3 cut(s)	528, 661, 1224
PscI	ACATGT	1 cut(s)	1665
Psp6I	CCWGG	3 cut(s)	1197, 1600, 1642
PspFI	CCCAGC	1 cut(s)	306
PspGI	CCWGG	3 cut(s)	1197, 1600, 1642
PspN4I	GGNNCC	2 cut(s)	1523, 1606
PspPI	GGNCC	3 cut(s)	433, 1086, 1320
PsyI	GACNNNGTC	3 cut(s)	95, 451, 1090
RruI	TCGCGA	1 cut(s)	687
RsaI	GTAC	6 cut(s)	1445, 1523, 1560, 1653, 1691, 1706
RsaNI	GTAC	6 cut(s)	1444, 1522, 1559, 1652, 1690, 1705
RseI	CAYNNNNRTG	2 cut(s)	386, 1741
SapI	GCTCTTC	1 cut(s)	264
SaqAI	TTAA	6 cut(s)	195, 588, 605, 636, 902, 1716
SatI	GCNGC	3 cut(s)	527, 660, 1223
Sau3AI	GATC	6 cut(s)	102, 498, 666, 682, 826, 1161
Sau96I	GGNCC	3 cut(s)	433, 1086, 1320
ScrFI	CCNGG	7 cut(s)	175, 836, 1199, 1391, 1602, 1644, 1774
SduI	GDGCHC	1 cut(s)	787
SexAI	ACCWGGT	1 cut(s)	1600
SfaNI	GCATC	3 cut(s)	47, 933, 1756
SinI	GGWCC	3 cut(s)	433, 1086, 1320
SmiMI	CAYNNNNRTG	2 cut(s)	386, 1741
SphI	GCATGC	1 cut(s)	1229
SseBI	AGGCCT	1 cut(s)	1279
SsiI	CCGC	5 cut(s)	4, 771, 1166, 1214, 1801
SspMI	CTAG	3 cut(s)	399, 680, 744
StuI	AGGCCT	1 cut(s)	1279
StyD4I	CCNGG	7 cut(s)	173, 834, 1197, 1389, 1600, 1642, 1772
StyI	CCWWGG	4 cut(s)	147, 1332, 1608, 1845
TaaI	ACNGT	7 cut(s)	230, 761, 970, 992, 1000, 1704, 1721
TaiI	ACGT	7 cut(s)	99, 455, 571, 784, 1362, 1538, 1731
TaqI	TCGA	7 cut(s)	99, 111, 225, 262, 829, 975, 1670
TatI	WGTACW	3 cut(s)	1651, 1689, 1704
TfiI	GAWTC	3 cut(s)	20, 395, 1585
Tru1I	TTAA	6 cut(s)	195, 588, 605, 636, 902, 1716
Tru9I	TTAA	6 cut(s)	195, 588, 605, 636, 902, 1716
TscAI	CASTG	2 cut(s)	73, 1018
TseI	GCWGC	3 cut(s)	526, 659, 1222
TspDTI	ATGAA	8 cut(s)	155, 265, 666, 869, 1268, 1288, 1316, 1784
TspGWI	ACGGA	2 cut(s)	579, 1740
TspRI	CASTG	2 cut(s)	73, 1018
Tth111I	GACNNNGTC	3 cut(s)	95, 451, 1090
VneI	GTGCAC	1 cut(s)	783
VpaK11BI	GGWCC	3 cut(s)	433, 1086, 1320
XapI	RAATTY	6 cut(s)	368, 404, 485, 556, 944, 1028
XceI	RCATGY	3 cut(s)	1206, 1229, 1669
XspI	CTAG	3 cut(s)	399, 680, 744
ZraI	GACGTC	1 cut(s)	1729
Zsp2I	ATGCAT	1 cut(s)	1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.