FvH4_6g06490

Respiratory burst

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005589
Physical Location & Seq
Forward (+)
3796206 .. 3801396
5191 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06490.t1

Sequence Viewer

Length: 2640 bp
ATGGAGATTGAAGAAAACCCGCTGCCGGAGAAAGAGAGCATACGGGTCGGCGGGCACAGCGGCCCACTAGTGACTGGCAGCAAGACGAGGAGCAACAGCAACTTAAGCGCAAGGTTCAAAGAAGACGATCAGTGCTATGTGGAAGTGACACTGGACGTTTGCGACGACAACACCTTTGTGCTTCGGAACATCAGAGGAGCTGATGAGCCTGGGTCGACGTCGGCGAGGATAGAGGGAAGACCTTCTCTTGCTTCTCAACTCTCGTTTAAACTCAAGAAAGTCTCGCATGAACTGAAGCGCATGAAATCTTCTTTGAGCTTCAAGAAGGTCGACCAGCCAGCCAAGCCGGGTGTTGCTCGTGCCCTAAAGGGACTCAAGTTCATGACCAAGAATGTGTGCAGTGAAGGTTGGCTGGAGATTGAAATGAGGTTTGATGAATTGGCTGTCGATGGAACTCTCCCTAAATCGGTCTTTGCTCAATGCATAGGGATGAAGGAGTCGAGTGAGTTTGCGTGCGAGGTGTTTGATGCATTGGCTCGTCGGAGAGGAATTACATCATGTTGTGTTACCAAGGAAGAACTGAGAGAATTTTGGGAACAGATTTCAGATCACAGCTTCAATGCCAGGCTTCAAACCTTCTTTGACATGGTGGATAAAAATGCAGATGGTCGAATCTCAGAAGAAGAGGTGAAAGAGATTATTACGTTAAGTGCCTCTGCTAATAATCTGTCAAAAATTCTTGAACAAGCTGAGGAATATGCAGCACTGATCATGGAAGAGCTTGATCATGACAACCTTGGATATATTGATTTGCACAACTTGGAAATGCTACTTCTCTCGGGCCCAACCCAATCTTCAAACCTGGAAACAGATAGCCACATTCAGAGCCGGCTGCTCAGCGAAAAACTGGTTCCTACCAAAGAGTACAACCCTATAAGGCGGTGGTGCCGGCGGCTGTCCTACTTTGTTGAGGATAACTGGAAGCGAATTTGGGTCATTGTGCTATGGCTTCTGATATGCATGGGCCTCTTTGCTTGGAAATTTATTCAGTATAGACATAGAGAGGTTTACCATGTAATGGGGTATTGTGTGTGCATTGCCAAAGGTGGAGCTGAGACCCTGAAGTTCAACATGGCCCTGATTCTTCTACCAGTATGTAGAAACACAATTACTTGGCTAAGAAGCAAGACCAAGTTAGGGGGTGTAGTTCCATTTGATGACAACATCAATTTTCACAAGGTGATAGCGTTTGGAATTGCAGTAGGGGTCGGTTTACATGCAGGTTCCCATCTTACATGCGACTTCCCCAAGCTACTACATTCGACCAACGATCAATACGATAAGTTGAAGCCATTTTTTGGCCAGAAACGACCGGATGACTACTGGTGGTTTGTGAAGGGAACGGAGGGCTGGACTGGGGTGGTTATGGTGGCACTAATGCTTGTTGCATACACATTGGCTCAACCTTGGTTCCGTCGCAATCGCCTAAGAAACCTCCCTAAACCCCTAAAGAAACTCACTGGGTTTAATGCATTTTGGTACTCCCATCACCTATTTCTCATAGTGTACATCCTCTTTATTATCCATGGATACTTTCTCTACCTCTCCAAGAACTGGGACAAGAAAACAACATGGATGTATTTGGCTTTTCCATTGATAATGTATGCATGTGAGCGCTTGCTTCGTGCATTCAGGTCTGGATATGAGACAGTGAAGATCTTGAAGGTCGCTGTTTACCCTGGAAACGTTTTGGCACTGCATATGTCTAAACCACAAGGATTAAAATATACCAGTGGACAGTACATTTACATAAATTGCTCTGCTATTTCCCCAATTCAATGGCATCCGTTCTCAATTACTTCAGCTCCTGGAGACGATCATCTAAGCGTTCATATCCGCACGTTGGGTGACTGGACATCTCAGCTCAAATACATATTCTCTCAGGTTTGTCAACCTCCCTCTATAGAGCACAGTGGCCTTCTAAGAGCTGACATTGAACAACCAAATATCCATACCAGGATGCCAAAACTTCTTATTGATGGTCCATATGGTGCACCAGCACAAGACTACAAAAACTATGAAGTTCTCCTACTTGTAGGACTTGGAATTGGAGCAACTCCACTAATAAGCATTGTCAAAGATGTGCTTAACAACATTAAGCGACAAAAAGAACTAGAAGCTCAAATGTTGGTGGAAAATGGTGTTAAAAGAAAGTCGACCTTTGCAACAAAACGAGCTTATTTCTACTGGATCACAAGAGAGCAAGGCTCCTTCGAGTGGTTTAGGGGTGTCATGAATGAAGTAGCCGAAAATGATCTAGATGGCCTGATAGAGCTTCATAACTACTGCACCAGTGTTTATGAAGAAGGAGATGCTAGATCAGCTTTGATCACTATGCTTCAGTCTATAAACCATGCCAAAAATGGTGTGGATGTAGTTTCAGGAACAAGGGTGAAGACGCATTTTGCTAGACCGAATTGGCGTAATGTTTTTAAGCATGTAGCTGTGAAGCACCCTGATCAAAGAGTTGGAGTGTTTTATTGTGGTGCACATGGATTAGTTGGGGAGTTAAAGAGGTTAGCTCAAGACTTTTCCAGAAAAACTGAGACCAAGTTTGATTTCCATAAAGAGAACTTTTAG

Protein Analysis

880

Amino Acids

100.64

Weight (kDa)

8.78

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 117 - 208 1.7e-33 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 209 - 271 7.6e-06 EF-hand domain pair
Ferric_reduct PF01794 377 - 527 3.5e-11 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 570 - 687 7.3e-35 FAD-binding domain
NAD_binding_6 PF08030 693 - 861 1.2e-50 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 221
Acc36I ACCTGC 1 cut(s) 1271
AccB1I GGYRCC 1 cut(s) 945
AccB7I CCANNNNNTGG 3 cut(s) 1078, 1358, 1614
AccI GTMKAC 3 cut(s) 215, 330, 2216
AciI CCGC 6 cut(s) 20, 51, 60, 940, 952, 1897
AclI AACGTT 1 cut(s) 1746
AclWI GGATC 1 cut(s) 2258
AcoI YGGCCR 1 cut(s) 1360
AcsI RAATTY 4 cut(s) 587, 735, 987, 1040
AcuI CTGAAG 4 cut(s) 314, 1142, 1845, 2384
AcyI GRCGYC 1 cut(s) 218
AdeI CACNNNGTG 1 cut(s) 1240
AfaI GTAC 4 cut(s) 926, 1541, 1568, 1802
AfeI AGCGCT 1 cut(s) 1676
AfiI CCNNNNNNNGG 8 cut(s) 25, 466, 1078, 1197, 1358, 1614, 1903, 2277
AflII CTTAAG 1 cut(s) 103
AhlI ACTAGT 1 cut(s) 67
AjnI CCWGG 6 cut(s) 208, 623, 861, 1738, 1867, 2015
AjuI GAANNNNNNNTTGG 4 cut(s) 838, 870, 2603, 2635
AleI CACNNNNGTG 1 cut(s) 176
Alw21I GWGCWC 3 cut(s) 1971, 2056, 2551
Alw26I GTCTC 5 cut(s) 286, 1109, 1700, 1866, 2600
Alw44I GTGCAC 2 cut(s) 2052, 2547
AlwI GGATC 1 cut(s) 2258
AlwNI CAGNNNCTG 1 cut(s) 1868
Ama87I CYCGRG 1 cut(s) 838
Aor51HI AGCGCT 1 cut(s) 1676
AoxI GGCC 7 cut(s) 61, 841, 1024, 1134, 1360, 1975, 2323
ApaI GGGCCC 1 cut(s) 845
ApaLI GTGCAC 2 cut(s) 2052, 2547
ApeKI GCWGC 4 cut(s) 22, 78, 761, 892
ApoI RAATTY 4 cut(s) 587, 735, 987, 1040
ArsI GACNNNNNNTTYG 2 cut(s) 158, 190
Asp700I GAANNNNTTC 1 cut(s) 241
AspLEI GCGC 3 cut(s) 110, 300, 1677
AspS9I GGNCC 6 cut(s) 62, 841, 842, 1024, 1135, 2042
AsuC2I CCSGG 1 cut(s) 348
AsuHPI GGTGA 5 cut(s) 700, 1252, 1541, 1919, 2464
AvaI CYCGRG 1 cut(s) 838
AvaII GGWCC 1 cut(s) 2042
BaeGI GKGCMC 5 cut(s) 57, 364, 845, 2056, 2551
BalI TGGCCA 1 cut(s) 1362
BanI GGYRCC 1 cut(s) 945
BanII GRGCYC 1 cut(s) 845
BarI GAAGNNNNNNTAC 2 cut(s) 2073, 2105
BauI CACGAG 1 cut(s) 357
BbsI GAAGAC 3 cut(s) 129, 244, 2462
Bbv12I GWGCWC 3 cut(s) 1971, 2056, 2551
BbvCI CCTCAGC 1 cut(s) 750
BbvI GCAGC 4 cut(s) 9, 90, 773, 879
BccI CCATC 6 cut(s) 443, 659, 1296, 1554, 2033, 2315
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BciT130I CCWGG 6 cut(s) 210, 625, 863, 1740, 1869, 2017
BciVI GTATCC 1 cut(s) 1583
BclI TGATCA 4 cut(s) 768, 784, 2388, 2518
BcnI CCSGG 1 cut(s) 348
BcoDI GTCTC 5 cut(s) 286, 1109, 1700, 1866, 2600
BcuI ACTAGT 1 cut(s) 67
BfaI CTAG 5 cut(s) 68, 2174, 2318, 2376, 2469
BfmI CTRYAG 1 cut(s) 1962
BfoI RGCGCY 1 cut(s) 1678
BfrI CTTAAG 1 cut(s) 103
BfuAI ACCTGC 1 cut(s) 1271
BfuI GTATCC 1 cut(s) 1583
BglII AGATCT 1 cut(s) 1716
BisI GCNGC 6 cut(s) 23, 61, 79, 762, 893, 953
BlpI GCTNAGC 1 cut(s) 896
BlsI GCNGC 6 cut(s) 24, 62, 80, 763, 894, 954
Bme1390I CCNGG 7 cut(s) 210, 348, 625, 863, 1740, 1869, 2017
Bme18I GGWCC 1 cut(s) 2042
BmeT110I CYCGRG 1 cut(s) 838
BmgT120I GGNCC 6 cut(s) 62, 841, 842, 1024, 1135, 2042
BmiI GGNNCC 6 cut(s) 843, 912, 947, 1285, 1472, 2269
BmrFI CCNGG 7 cut(s) 210, 348, 625, 863, 1740, 1869, 2017
BmrI ACTGGG 3 cut(s) 1425, 1530, 1624
BmsI GCATC 4 cut(s) 517, 1852, 2010, 2362
BmuI ACTGGG 3 cut(s) 1425, 1530, 1624
BpiI GAAGAC 3 cut(s) 129, 244, 2462
BplI GAGNNNNNCTC 4 cut(s) 2252, 2284, 2566, 2598
BpmI CTGGAG 2 cut(s) 434, 1890
Bpu10I CCTNAGC 1 cut(s) 750
Bpu1102I GCTNAGC 1 cut(s) 896
BpuEI CTTGAG 3 cut(s) 257, 359, 2568
BpuMI CCSGG 1 cut(s) 348
BsaHI GRCGYC 1 cut(s) 218
BsaI GGTCTC 2 cut(s) 1109, 2600
BsaJI CCNNGG 6 cut(s) 209, 570, 796, 1466, 1585, 1738
BsaWI WCCGGW 1 cut(s) 1372
BsaXI ACNNNNNCTCC 2 cut(s) 1849, 1879
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 466, 1078, 1197, 1358, 1614, 1903, 2277
Bse118I RCCGGY 2 cut(s) 888, 948
Bse3DI GCAATG 1 cut(s) 1095
BseBI CCWGG 6 cut(s) 210, 625, 863, 1740, 1869, 2017
BseDI CCNNGG 6 cut(s) 209, 570, 796, 1466, 1585, 1738
BseGI GGATG 7 cut(s) 495, 1381, 1569, 1641, 1843, 2025, 2437
BseLI CCNNNNNNNGG 8 cut(s) 25, 466, 1078, 1197, 1358, 1614, 1903, 2277
BseMI GCAATG 1 cut(s) 1095
BseMII CTCAG 8 cut(s) 572, 690, 741, 910, 1104, 1934, 1955, 2595
BseRI GAGGAG 2 cut(s) 103, 210
BseSI GKGCMC 5 cut(s) 57, 364, 845, 2056, 2551
BseXI GCAGC 4 cut(s) 9, 90, 773, 879
BsgI GTGCAG 2 cut(s) 418, 2332
Bsh1285I CGRYCG 1 cut(s) 1373
BshFI GGCC 7 cut(s) 63, 843, 1026, 1136, 1362, 1977, 2325
BshNI GGYRCC 1 cut(s) 945
BsiEI CGRYCG 1 cut(s) 1373
BsiHKAI GWGCWC 3 cut(s) 1971, 2056, 2551
BsiHKCI CYCGRG 1 cut(s) 838
BsiSI CCGG 5 cut(s) 26, 347, 889, 949, 1373
BslFI GGGAC 2 cut(s) 384, 1631
BslI CCNNNNNNNGG 8 cut(s) 25, 466, 1078, 1197, 1358, 1614, 1903, 2277
BsmAI GTCTC 5 cut(s) 286, 1109, 1700, 1866, 2600
BsmBI CGTCTC 1 cut(s) 1866
BsmFI GGGAC 2 cut(s) 384, 1631
BsmI GAATGC 1 cut(s) 1688
BsnI GGCC 7 cut(s) 63, 843, 1026, 1136, 1362, 1977, 2325
Bso31I GGTCTC 2 cut(s) 1109, 2600
BsoBI CYCGRG 1 cut(s) 838
Bsp120I GGGCCC 1 cut(s) 841
Bsp1286I GDGCHC 6 cut(s) 57, 364, 845, 1971, 2056, 2551
Bsp1407I TGTACA 1 cut(s) 1566
Bsp1720I GCTNAGC 1 cut(s) 896
Bsp19I CCATGG 1 cut(s) 1585
BspACI CCGC 6 cut(s) 20, 51, 60, 940, 952, 1897
BspANI GGCC 7 cut(s) 63, 843, 1026, 1136, 1362, 1977, 2325
BspCNI CTCAG 8 cut(s) 573, 689, 742, 909, 1105, 1933, 1954, 2596
BspHI TCATGA 3 cut(s) 381, 787, 2292
BspLI GGNNCC 6 cut(s) 843, 912, 947, 1285, 1472, 2269
BspMI ACCTGC 1 cut(s) 1271
BspPI GGATC 1 cut(s) 2258
BspQI GCTCTTC 1 cut(s) 771
BspT107I GGYRCC 1 cut(s) 945
BspTI CTTAAG 1 cut(s) 103
BspTNI GGTCTC 2 cut(s) 1109, 2600
BsrDI GCAATG 1 cut(s) 1095
BsrFI RCCGGY 2 cut(s) 888, 948
BsrGI TGTACA 1 cut(s) 1566
BssAI RCCGGY 2 cut(s) 888, 948
BssECI CCNNGG 6 cut(s) 209, 570, 796, 1466, 1585, 1738
BssNI GRCGYC 1 cut(s) 218
BssSI CACGAG 1 cut(s) 357
BssT1I CCWWGG 4 cut(s) 570, 796, 1466, 1585
Bst2BI CACGAG 1 cut(s) 357
Bst2UI CCWGG 6 cut(s) 210, 625, 863, 1740, 1869, 2017
Bst4CI ACNGT 3 cut(s) 1711, 1800, 1973
Bst6I CTCTTC 2 cut(s) 678, 771
BstACI GRCGYC 1 cut(s) 218
BstAFI CTTAAG 1 cut(s) 103
BstAUI TGTACA 1 cut(s) 1566
BstC8I GCNNGC 6 cut(s) 53, 339, 514, 890, 950, 1679
BstDSI CCRYGG 1 cut(s) 1585
BstF5I GGATG 7 cut(s) 495, 1381, 1569, 1641, 1843, 2025, 2437
BstH2I RGCGCY 1 cut(s) 1678
BstHHI GCGC 3 cut(s) 110, 300, 1677
BstMAI GTCTC 5 cut(s) 286, 1109, 1700, 1866, 2600
BstMCI CGRYCG 1 cut(s) 1373
BstMWI GCNNNNNNNGC 4 cut(s) 57, 105, 343, 2381
BstNI CCWGG 6 cut(s) 210, 625, 863, 1740, 1869, 2017
BstNSI RCATGY 4 cut(s) 1280, 1299, 1671, 2501
BstSCI CCNGG 7 cut(s) 208, 346, 623, 861, 1738, 1867, 2015
BstSFI CTRYAG 1 cut(s) 1962
BstSLI GKGCMC 5 cut(s) 57, 364, 845, 2056, 2551
BstV1I GCAGC 4 cut(s) 9, 90, 773, 879
BstV2I GAAGAC 3 cut(s) 129, 244, 2462
BstX2I RGATCY 1 cut(s) 1716
BstXI CCANNNNNNTGG 1 cut(s) 1839
BstYI RGATCY 1 cut(s) 1716
BsuI GTATCC 1 cut(s) 1583
BsuRI GGCC 7 cut(s) 63, 843, 1026, 1136, 1362, 1977, 2325
BtgI CCRYGG 1 cut(s) 1585
BtsCI GGATG 7 cut(s) 495, 1381, 1569, 1641, 1843, 2025, 2437
BtsI GCAGTG 2 cut(s) 406, 1754
BveI ACCTGC 1 cut(s) 1271
Cac8I GCNNGC 6 cut(s) 53, 339, 514, 890, 950, 1679
CaiI CAGNNNCTG 1 cut(s) 1868
CciI TCATGA 3 cut(s) 381, 787, 2292
CfoI GCGC 3 cut(s) 110, 300, 1677
Cfr10I RCCGGY 2 cut(s) 888, 948
Cfr13I GGNCC 6 cut(s) 62, 841, 842, 1024, 1135, 2042
CseI GACGC 1 cut(s) 2467
Csp6I GTAC 4 cut(s) 925, 1540, 1567, 1801
CviQI GTAC 4 cut(s) 925, 1540, 1567, 1801
DraI TTTAAA 1 cut(s) 268
DraIII CACNNNGTG 1 cut(s) 1240
EaeI YGGCCR 1 cut(s) 1360
Eam1104I CTCTTC 2 cut(s) 678, 771
EarI CTCTTC 2 cut(s) 678, 771
Eco130I CCWWGG 4 cut(s) 570, 796, 1466, 1585
Eco24I GRGCYC 1 cut(s) 845
Eco31I GGTCTC 2 cut(s) 1109, 2600
Eco47I GGWCC 1 cut(s) 2042
Eco47III AGCGCT 1 cut(s) 1676
Eco57I CTGAAG 4 cut(s) 314, 1142, 1845, 2384
Eco88I CYCGRG 1 cut(s) 838
EcoRII CCWGG 6 cut(s) 208, 623, 861, 1738, 1867, 2015
EcoT14I CCWWGG 4 cut(s) 570, 796, 1466, 1585
EcoT22I ATGCAT 5 cut(s) 485, 532, 1022, 1534, 1669
EcoT38I GRGCYC 1 cut(s) 845
ErhI CCWWGG 4 cut(s) 570, 796, 1466, 1585
Esp3I CGTCTC 1 cut(s) 1866
FalI AAGNNNNNCTT 4 cut(s) 2130, 2162, 2204, 2236
FaqI GGGAC 2 cut(s) 384, 1631
FauI CCCGC 2 cut(s) 27, 44
FauNDI CATATG 2 cut(s) 1761, 2047
FbaI TGATCA 4 cut(s) 768, 784, 2388, 2518
FblI GTMKAC 3 cut(s) 215, 330, 2216
Fnu4HI GCNGC 6 cut(s) 23, 61, 79, 762, 893, 953
FokI GGATG 7 cut(s) 502, 1388, 1556, 1648, 1830, 2032, 2444
FriOI GRGCYC 1 cut(s) 845
Fsp4HI GCNGC 6 cut(s) 23, 61, 79, 762, 893, 953
FspBI CTAG 5 cut(s) 68, 2174, 2318, 2376, 2469
GlaI GCGC 3 cut(s) 109, 299, 1676
GluI GCNGC 6 cut(s) 23, 61, 79, 762, 893, 953
GsuI CTGGAG 2 cut(s) 434, 1890
HaeII RGCGCY 1 cut(s) 1678
HaeIII GGCC 7 cut(s) 63, 843, 1026, 1136, 1362, 1977, 2325
HapII CCGG 5 cut(s) 26, 347, 889, 949, 1373
HgaI GACGC 1 cut(s) 2467
HhaI GCGC 3 cut(s) 110, 300, 1677
Hin1I GRCGYC 1 cut(s) 218
Hin6I GCGC 3 cut(s) 108, 298, 1675
HinP1I GCGC 3 cut(s) 108, 298, 1675
HincII GTYRAC 4 cut(s) 216, 331, 1952, 2217
HindII GTYRAC 4 cut(s) 216, 331, 1952, 2217
HinfI GANTC 4 cut(s) 372, 497, 672, 1141
HpaII CCGG 5 cut(s) 26, 347, 889, 949, 1373
HphI GGTGA 5 cut(s) 700, 1252, 1541, 1919, 2464
Hpy188I TCNGA 7 cut(s) 186, 194, 543, 607, 679, 885, 1014
Hpy99I CGWCG 5 cut(s) 167, 220, 223, 543, 1479
HpyCH4III ACNGT 3 cut(s) 1711, 1800, 1973
HpyCH4IV ACGT 5 cut(s) 156, 218, 704, 1746, 1901
HpyF10VI GCNNNNNNNGC 4 cut(s) 57, 105, 343, 2381
HpySE526I ACGT 5 cut(s) 156, 218, 704, 1746, 1901
Hsp92I GRCGYC 1 cut(s) 218
HspAI GCGC 3 cut(s) 108, 298, 1675
KroI GCCGGC 2 cut(s) 888, 948
KroNI GCCGGC 2 cut(s) 890, 950
Ksp22I TGATCA 4 cut(s) 768, 784, 2388, 2518
LguI GCTCTTC 1 cut(s) 771
LmnI GCTCC 6 cut(s) 90, 197, 1109, 1870, 2111, 2273
Lsp1109I GCAGC 4 cut(s) 9, 90, 773, 879
LweI GCATC 4 cut(s) 517, 1852, 2010, 2362
MaeI CTAG 5 cut(s) 68, 2174, 2318, 2376, 2469
MaeII ACGT 5 cut(s) 156, 218, 704, 1746, 1901
MaeIII GTNAC 4 cut(s) 70, 145, 565, 1907
MflI RGATCY 1 cut(s) 1716
MhlI GDGCHC 6 cut(s) 57, 364, 845, 1971, 2056, 2551
MlsI TGGCCA 1 cut(s) 1362
MluNI TGGCCA 1 cut(s) 1362
MlyI GAGTC 2 cut(s) 366, 506
MmeI TCCRAC 2 cut(s) 521, 2509
Mox20I TGGCCA 1 cut(s) 1362
Mph1103I ATGCAT 5 cut(s) 485, 532, 1022, 1534, 1669
MroNI GCCGGC 2 cut(s) 888, 948
MroXI GAANNNNTTC 1 cut(s) 241
MscI TGGCCA 1 cut(s) 1362
MslI CAYNNNNRTG 2 cut(s) 176, 488
Msp20I TGGCCA 1 cut(s) 1362
MspA1I CMGCKG 2 cut(s) 22, 60
MspCI CTTAAG 1 cut(s) 103
MspI CCGG 5 cut(s) 26, 347, 889, 949, 1373
MspR9I CCNGG 7 cut(s) 210, 348, 625, 863, 1740, 1869, 2017
MssI GTTTAAAC 1 cut(s) 268
Mva1269I GAATGC 1 cut(s) 1688
MvaI CCWGG 6 cut(s) 210, 625, 863, 1740, 1869, 2017
MwoI GCNNNNNNNGC 4 cut(s) 57, 105, 343, 2381
NaeI GCCGGC 2 cut(s) 890, 950
NciI CCSGG 1 cut(s) 348
NcoI CCATGG 1 cut(s) 1585
NdeI CATATG 2 cut(s) 1761, 2047
NgoMIV GCCGGC 2 cut(s) 888, 948
NlaIV GGNNCC 6 cut(s) 843, 912, 947, 1285, 1472, 2269
NmuCI GTSAC 3 cut(s) 70, 145, 1907
NsiI ATGCAT 5 cut(s) 485, 532, 1022, 1534, 1669
NspI RCATGY 4 cut(s) 1280, 1299, 1671, 2501
OliI CACNNNNGTG 1 cut(s) 176
PagI TCATGA 3 cut(s) 381, 787, 2292
PciSI GCTCTTC 1 cut(s) 771
PcsI WCGNNNNNNNCGW 3 cut(s) 162, 221, 1335
PctI GAATGC 1 cut(s) 1688
PdiI GCCGGC 2 cut(s) 890, 950
PdmI GAANNNNTTC 1 cut(s) 241
PfeI GAWTC 2 cut(s) 672, 1141
PflMI CCANNNNNTGG 3 cut(s) 1078, 1358, 1614
PfoI TCCNGGA 1 cut(s) 1867
PkrI GCNGC 6 cut(s) 24, 62, 80, 763, 894, 954
PleI GAGTC 2 cut(s) 366, 505
PmeI GTTTAAAC 1 cut(s) 268
PpsI GAGTC 2 cut(s) 366, 505
Psp1406I AACGTT 1 cut(s) 1746
Psp6I CCWGG 6 cut(s) 208, 623, 861, 1738, 1867, 2015
PspGI CCWGG 6 cut(s) 208, 623, 861, 1738, 1867, 2015
PspN4I GGNNCC 6 cut(s) 843, 912, 947, 1285, 1472, 2269
PspOMI GGGCCC 1 cut(s) 841
PspPI GGNCC 6 cut(s) 62, 841, 842, 1024, 1135, 2042
PstNI CAGNNNCTG 1 cut(s) 1868
PsuI RGATCY 1 cut(s) 1716
RsaI GTAC 4 cut(s) 926, 1541, 1568, 1802
RsaNI GTAC 4 cut(s) 925, 1540, 1567, 1801
RseI CAYNNNNRTG 2 cut(s) 176, 488
SalI GTCGAC 3 cut(s) 214, 329, 2215
SapI GCTCTTC 1 cut(s) 771
SatI GCNGC 6 cut(s) 23, 61, 79, 762, 893, 953
Sau96I GGNCC 6 cut(s) 62, 841, 842, 1024, 1135, 2042
SchI GAGTC 2 cut(s) 366, 506
ScrFI CCNGG 7 cut(s) 210, 348, 625, 863, 1740, 1869, 2017
SduI GDGCHC 6 cut(s) 57, 364, 845, 1971, 2056, 2551
SfaNI GCATC 4 cut(s) 517, 1852, 2010, 2362
SfcI CTRYAG 1 cut(s) 1962
SinI GGWCC 1 cut(s) 2042
SmiMI CAYNNNNRTG 2 cut(s) 176, 488
SmlI CTYRAG 4 cut(s) 103, 272, 374, 2583
SmoI CTYRAG 4 cut(s) 103, 272, 374, 2583
SpeI ACTAGT 1 cut(s) 67
SsiI CCGC 6 cut(s) 20, 51, 60, 940, 952, 1897
SspMI CTAG 5 cut(s) 68, 2174, 2318, 2376, 2469
StyD4I CCNGG 7 cut(s) 208, 346, 623, 861, 1738, 1867, 2015
StyI CCWWGG 4 cut(s) 570, 796, 1466, 1585
TaaI ACNGT 3 cut(s) 1711, 1800, 1973
TaiI ACGT 5 cut(s) 159, 221, 707, 1749, 1904
TaqI TCGA 8 cut(s) 215, 330, 447, 500, 670, 1322, 2216, 2274
TaqII GACCGA 2 cut(s) 457, 2488
TatI WGTACW 3 cut(s) 924, 1566, 1800
TauI GCSGC 2 cut(s) 63, 955
TfiI GAWTC 2 cut(s) 672, 1141
TseFI GTSAC 3 cut(s) 70, 145, 1907
TseI GCWGC 4 cut(s) 22, 78, 761, 892
Tsp45I GTSAC 3 cut(s) 70, 145, 1907
TspGWI ACGGA 3 cut(s) 1418, 1463, 1836
Van91I CCANNNNNTGG 3 cut(s) 1078, 1358, 1614
Vha464I CTTAAG 1 cut(s) 103
VneI GTGCAC 2 cut(s) 2052, 2547
VpaK11BI GGWCC 1 cut(s) 2042
XapI RAATTY 4 cut(s) 587, 735, 987, 1040
XbaI TCTAGA 1 cut(s) 2317
XceI RCATGY 4 cut(s) 1280, 1299, 1671, 2501
XcmI CCANNNNNNNNNTGG 2 cut(s) 2420, 2425
XmiI GTMKAC 3 cut(s) 215, 330, 2216
XmnI GAANNNNTTC 1 cut(s) 241
XspI CTAG 5 cut(s) 68, 2174, 2318, 2376, 2469
ZraI GACGTC 1 cut(s) 219
Zsp2I ATGCAT 5 cut(s) 485, 532, 1022, 1534, 1669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.