Rh3AG068400

Respiratory burst

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0005589
Physical Location & Seq
Forward (+)
4753968 .. 4758940
4973 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG068400.1

Sequence Viewer

Length: 2631 bp
ATGGAGATTCAAGCAGAAAACCCGCTGCCGGATAAAGAGAGCAAACGGGTCGGGCAGGGCGGCCCGCTAGGGACCAGCAGCAAGATGAGGAGCAACAGCAACAGAAGCACAATGTTCAAAGATGACGATCAATGCTGTGTGGAAGTGGCACTCGATGTTTGCGACAACAATACCTTTGGGCTTCGGAACATCAGACGAGCTGAACCTGAGTCGACGTCAGCAAGGCTAGAGAGAAGACTTGCTTCTCAACTCTCTTTTAAACTCAAGAAAGTCTCACGTGAACTGAAACGCATGAAATCTTCCTTGAGCTTCAAGAAGGTCGACAGACCCACCAAGCCCGGTATTGCTCGTGCCCTTAAGGGACTCAAGCTCATGACCAAAAATGTGTGCAGTGAAGGTTGGCCAGAGATAGAAATAAGGTTTGATGAATTGGCTGTCGATGGAACTCTTCCAAAATCAGTCTTTGCTCAATGCATAGGGATGAAAGAGTCGAGTGAGTTTGCTTGCGAAGTATTCGATGCATTGGCTCGTCGGAGAGGAATAACATCGTGTTGTGTGACCAAGGAAGAGTTGAGAGAATTTTGGGAACAAATTTCAGATCACAGCTTCAATGCCAGGCTTCAAACCTTCTTTGACATGGTGGATAAAAATGCAGATGGTCGAATCTCTGAAGAAGAGGTGAAAGAGATTATTACCTTAAGTGCCTCTGCTAATAAGCTGTCAAAAATTCTAGAACATGCTGAGGAATATGCAGCATTGATTATGGAAGAGCTTGATCATGACAACCTTGGATATATTGATTTGTACAACTTGAAAATGCTACTTCTTCCGGGCCCAACCCAATCTTCGAACCTGGAAACAGACAGCTACATTCAGAGCCGGTTGCTAAGTGAAAAGCTGGTTCCGACCAAAGAGCACAACCCTATAAGACGGTGGTGCCGGCGGCTGTCCTACTTTGTTGAGGATAATTGGAGGCGGATATGGGTCGTTCTGCTATGGCTTTTTATATGCATGGGCCTCTTTGCTTGGAAATTCATTCAGTATAGACATAGGGAGGTCTTCCATGTAATGGGCTATTGTGTGTGCATTGCCAAAGGTGGAGCTGAGACCCTAAAGTTTAACATGGCCCTGATTCTTCTTCCGGTGTGTAGAAATACAATTACTTGGCTAAGGAGCAAGACCAAGTTAGGAGGTGTAGTTCCATTTGATGACAATATCAATTTTCATAAGGTGATCGCGTTTGGAATTGCAGTTGGGGTCAGTCTCCATGCTGGTTCCCATCTGACATGCGACTTCCCCAGGCTACTACACTCAACCAATGATCAATACGACAAGATGAAGCCATTTTTTGGCCAAAAACGACCCGACAACTACTGGTGGTTTCTGAAGGGAACCGAGGGCTGGACCGGGGTGGTTATGTTGGCACTAATGCTAGTTGCATACACATTGGCTCAACCTTGGTTCCGTCGCAATCGACTAAGAAACCTCCCTAAAACCTTAAAGAAAATTACAGGGTTCAATGCATTTTGGTACTCCCATCACCTCTTTATCATTGTGTACATCCTCCTTATTATCCATGGATACTTCCTGTACCTCTCCAAGGACTGGGACAAGAAAACAACATGGATGTATCTGGCTTTCCCAGTAATAATATATGCATGTGAGCGTTTGCTTCGTGCTTTTAGGTCTGGATATGAATCAGTGAAGATCTTAAAGGTTACTGTTTACCCGGGAAACGTATTGGCACTCCATATGTCTAAACCACAAGGATTAAAATATACCAGTGGACAGTATATTTACATAAATTGTCCTGCTATTTCCTCATTTCAATGGCATCCATTCTCAATTACTTCAGCTTCTGGAGACGACTATCTAAGTGTTCATATTCGCACGTTGGGTGATTGGACATCTCAGCTCAAATACATTTTCTCTCAGGTTTGCCAACGTCCTCCTCTAGAGCTCAGTGGCCTTCTAAGAGCTGATACCGAACAACCCGATATACAACTCAGGATGCCAAGACTTCTTATTGATGGTCCATATGGTGCACCAGCTCAAGGCTACAAAAACTACGAAGTTCTTCTACTTGTTGGACTTGGAATTGGAGCAACTCCATTAATAAGCATACTCAAAGATGTGCTTAACAACATAAAGCGACAGAAAGAACTAGAAGCTCAAATGTTGGTGGAAAGTGGTGTTAAGAGAAAGTCTACTTTTGCAACAAAACGAGCTTATTTCTACTGGATCACAAGAGAGCAAGGCTCGTTCGAGTGGTTTAGGGGTGTGATGAATGAGGTCGCAGAAAATGACCTCGACGGCGTGATTGAGCTGCACAACTACTGCACCAGTGTCTATGAAGAAGGAGATGCTAGATCTGCTCTGATTACTATGCTTCAGTCTATAAACCATGCCAAAAATGGTGTGGATGTTGTATCAGGAACGAGGGTGAAGACACATTTTGCAAGACCAAAATGGCGTAATGTTTTTAAGCATGTGGCAGTAAAGCATCCTGATCAAAAAGTTGGAGTGTTTTATTGTGGCGCACATGGATTAGTTGGGGAGTTAAAGAGGTTCGCTAAAGACTTTTCCAGAAAAACTGAGACCGAGTTTGATTTCCACAAAGAGAACTTTTAG

Protein Analysis

876

Amino Acids

100.74

Weight (kDa)

9.16

Isoelectric Point (pI)

42.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 111 - 205 2e-32 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 206 - 268 6.4e-06 EF-hand domain pair
Ferric_reduct PF01794 374 - 524 5.6e-12 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 567 - 684 3e-35 FAD-binding domain
NAD_binding_6 PF08030 690 - 857 4.6e-50 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 218
AccB1I GGYRCC 1 cut(s) 936
AccB7I CCANNNNNTGG 3 cut(s) 1069, 1349, 1605
AccI GTMKAC 3 cut(s) 212, 321, 2207
AccII CGCG 1 cut(s) 1238
AciI CCGC 5 cut(s) 23, 60, 65, 943, 976
AclWI GGATC 1 cut(s) 2249
AcoI YGGCCR 2 cut(s) 401, 1351
AcsI RAATTY 4 cut(s) 578, 591, 726, 1031
AcuI CTGAAG 4 cut(s) 690, 1406, 1836, 2375
AcvI CACGTG 1 cut(s) 278
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 4 cut(s) 806, 1532, 1559, 1592
AfiI CCNNNNNNNGG 7 cut(s) 28, 1069, 1349, 1401, 1600, 1605, 2054
AflII CTTAAG 2 cut(s) 356, 697
AgsI TTSAA 8 cut(s) 11, 118, 313, 610, 623, 814, 1519, 1829
AjnI CCWGG 3 cut(s) 614, 852, 1298
AjuI GAANNNNNNNTTGG 2 cut(s) 829, 861
AloI GAACNNNNNNTCC 2 cut(s) 1182, 1214
Alw21I GWGCWC 3 cut(s) 918, 1962, 2047
Alw26I GTCTC 5 cut(s) 277, 1100, 1268, 1857, 2591
Alw44I GTGCAC 1 cut(s) 2043
AlwI GGATC 1 cut(s) 2249
AlwNI CAGNNNCTG 1 cut(s) 1859
Ama87I CYCGRG 1 cut(s) 1729
AoxI GGCC 7 cut(s) 61, 401, 832, 1015, 1125, 1351, 1966
ApaI GGGCCC 1 cut(s) 836
ApaLI GTGCAC 1 cut(s) 2043
ApeKI GCWGC 4 cut(s) 25, 78, 752, 2326
ApoI RAATTY 4 cut(s) 578, 591, 726, 1031
AseI ATTAAT 1 cut(s) 2114
Asp700I GAANNNNTTC 1 cut(s) 2076
AspLEI GCGC 1 cut(s) 2540
AspS9I GGNCC 8 cut(s) 62, 72, 832, 833, 1015, 1126, 1404, 2033
AsuC2I CCSGG 5 cut(s) 339, 831, 1408, 1730, 1731
AsuHPI GGTGA 5 cut(s) 691, 1243, 1532, 1910, 2455
AsuII TTCGAA 1 cut(s) 848
AvaI CYCGRG 1 cut(s) 1729
AvaII GGWCC 3 cut(s) 72, 1404, 2033
BaeGI GKGCMC 3 cut(s) 355, 836, 2047
BalI TGGCCA 2 cut(s) 403, 1353
BanI GGYRCC 1 cut(s) 936
BanII GRGCYC 2 cut(s) 836, 1962
BarI GAAGNNNNNNTAC 2 cut(s) 2064, 2096
BauI CACGAG 1 cut(s) 348
BbrPI CACGTG 1 cut(s) 278
BbsI GAAGAC 3 cut(s) 241, 1051, 2453
Bbv12I GWGCWC 3 cut(s) 918, 1962, 2047
BbvCI CCTCAGC 1 cut(s) 741
BbvI GCAGC 4 cut(s) 12, 90, 764, 2313
BccI CCATC 5 cut(s) 434, 650, 1287, 1545, 2024
BceAI ACGGC 1 cut(s) 2329
BcgI CGANNNNNNTGC 2 cut(s) 31, 65
BciT130I CCWGG 3 cut(s) 616, 854, 1300
BciVI GTATCC 1 cut(s) 1574
BclI TGATCA 3 cut(s) 775, 1321, 2509
BcnI CCSGG 5 cut(s) 339, 831, 1408, 1730, 1731
BcoDI GTCTC 5 cut(s) 277, 1100, 1268, 1857, 2591
BfaI CTAG 7 cut(s) 68, 227, 731, 1433, 1955, 2165, 2367
BfrI CTTAAG 2 cut(s) 356, 697
BfuI GTATCC 1 cut(s) 1574
BglII AGATCT 2 cut(s) 1707, 2369
BisI GCNGC 6 cut(s) 26, 61, 79, 753, 944, 2327
BlsI GCNGC 6 cut(s) 27, 62, 80, 754, 945, 2328
Bme1390I CCNGG 8 cut(s) 339, 616, 831, 854, 1300, 1408, 1730, 1731
Bme18I GGWCC 3 cut(s) 72, 1404, 2033
BmeT110I CYCGRG 1 cut(s) 1729
BmgT120I GGNCC 8 cut(s) 62, 72, 832, 833, 1015, 1126, 1404, 2033
BmiI GGNNCC 7 cut(s) 73, 834, 903, 938, 1276, 1393, 1463
BmrFI CCNGG 8 cut(s) 339, 616, 831, 854, 1300, 1408, 1730, 1731
BmrI ACTGGG 2 cut(s) 1615, 1637
BmsI GCATC 5 cut(s) 508, 1843, 2001, 2353, 2512
BmuI ACTGGG 2 cut(s) 1615, 1637
BpiI GAAGAC 3 cut(s) 241, 1051, 2453
BplI GAGNNNNNCTC 2 cut(s) 2243, 2275
BpmI CTGGAG 1 cut(s) 1881
Bpu10I CCTNAGC 2 cut(s) 741, 1169
Bpu14I TTCGAA 1 cut(s) 848
BpuEI CTTGAG 4 cut(s) 248, 325, 350, 2037
BpuMI CCSGG 5 cut(s) 339, 831, 1408, 1730, 1731
BsaAI YACGTR 1 cut(s) 278
BsaBI GATNNNNATC 2 cut(s) 126, 1696
BsaHI GRCGYC 1 cut(s) 215
BsaI GGTCTC 2 cut(s) 1100, 2591
BsaJI CCNNGG 9 cut(s) 561, 787, 1298, 1395, 1407, 1457, 1576, 1599, 1729
BsaWI WCCGGW 1 cut(s) 1141
BsaXI ACNNNNNCTCC 2 cut(s) 1182, 1212
Bsc4I CCNNNNNNNGG 7 cut(s) 28, 1069, 1349, 1401, 1600, 1605, 2054
Bse118I RCCGGY 2 cut(s) 879, 939
Bse1I ACTGG 6 cut(s) 1379, 1610, 1643, 1782, 2243, 2343
Bse3DI GCAATG 1 cut(s) 1086
Bse8I GATNNNNATC 2 cut(s) 126, 1696
BseBI CCWGG 3 cut(s) 616, 854, 1300
BseDI CCNNGG 9 cut(s) 561, 787, 1298, 1395, 1407, 1457, 1576, 1599, 1729
BseGI GGATG 7 cut(s) 486, 1560, 1632, 1834, 2016, 2428, 2503
BseJI GATNNNNATC 2 cut(s) 126, 1696
BseLI CCNNNNNNNGG 7 cut(s) 28, 1069, 1349, 1401, 1600, 1605, 2054
BseMI GCAATG 1 cut(s) 1086
BseMII CTCAG 8 cut(s) 198, 732, 1095, 1925, 1946, 1975, 2020, 2586
BseNI ACTGG 6 cut(s) 1379, 1610, 1643, 1782, 2243, 2343
BseRI GAGGAG 2 cut(s) 103, 1941
BseSI GKGCMC 3 cut(s) 355, 836, 2047
BseXI GCAGC 4 cut(s) 12, 90, 764, 2313
BsgI GTGCAG 3 cut(s) 409, 2312, 2323
Bsh1236I CGCG 1 cut(s) 1238
BshFI GGCC 7 cut(s) 63, 403, 834, 1017, 1127, 1353, 1968
BshNI GGYRCC 1 cut(s) 936
BsiHKAI GWGCWC 3 cut(s) 918, 1962, 2047
BsiHKCI CYCGRG 1 cut(s) 1729
BsiSI CCGG 8 cut(s) 29, 339, 830, 880, 940, 1142, 1407, 1730
BslFI GGGAC 3 cut(s) 85, 375, 1622
BslI CCNNNNNNNGG 7 cut(s) 28, 1069, 1349, 1401, 1600, 1605, 2054
BsmAI GTCTC 5 cut(s) 277, 1100, 1268, 1857, 2591
BsmBI CGTCTC 1 cut(s) 1857
BsmFI GGGAC 3 cut(s) 85, 375, 1622
BsnI GGCC 7 cut(s) 63, 403, 834, 1017, 1127, 1353, 1968
Bso31I GGTCTC 2 cut(s) 1100, 2591
BsoBI CYCGRG 1 cut(s) 1729
Bsp119I TTCGAA 1 cut(s) 848
Bsp120I GGGCCC 1 cut(s) 832
Bsp1286I GDGCHC 5 cut(s) 355, 836, 918, 1962, 2047
Bsp1407I TGTACA 2 cut(s) 804, 1557
Bsp143I GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
Bsp19I CCATGG 1 cut(s) 1576
BspACI CCGC 5 cut(s) 23, 60, 65, 943, 976
BspANI GGCC 7 cut(s) 63, 403, 834, 1017, 1127, 1353, 1968
BspCNI CTCAG 8 cut(s) 199, 733, 1096, 1924, 1945, 1974, 2019, 2587
BspFNI CGCG 1 cut(s) 1238
BspHI TCATGA 2 cut(s) 372, 778
BspLI GGNNCC 7 cut(s) 73, 834, 903, 938, 1276, 1393, 1463
BspPI GGATC 1 cut(s) 2249
BspQI GCTCTTC 1 cut(s) 762
BspT104I TTCGAA 1 cut(s) 848
BspT107I GGYRCC 1 cut(s) 936
BspTI CTTAAG 2 cut(s) 356, 697
BspTNI GGTCTC 2 cut(s) 1100, 2591
BsrDI GCAATG 1 cut(s) 1086
BsrFI RCCGGY 2 cut(s) 879, 939
BsrGI TGTACA 2 cut(s) 804, 1557
BsrI ACTGG 6 cut(s) 1379, 1610, 1643, 1782, 2243, 2343
BssAI RCCGGY 2 cut(s) 879, 939
BssECI CCNNGG 9 cut(s) 561, 787, 1298, 1395, 1407, 1457, 1576, 1599, 1729
BssMI GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
BssNI GRCGYC 1 cut(s) 215
BssSI CACGAG 1 cut(s) 348
BssT1I CCWWGG 5 cut(s) 561, 787, 1457, 1576, 1599
Bst2BI CACGAG 1 cut(s) 348
Bst2UI CCWGG 3 cut(s) 616, 854, 1300
Bst4CI ACNGT 3 cut(s) 933, 1723, 1791
Bst6I CTCTTC 4 cut(s) 453, 561, 669, 762
BstACI GRCGYC 1 cut(s) 215
BstAFI CTTAAG 2 cut(s) 356, 697
BstAUI TGTACA 2 cut(s) 804, 1557
BstBAI YACGTR 1 cut(s) 278
BstBI TTCGAA 1 cut(s) 848
BstC8I GCNNGC 3 cut(s) 65, 505, 941
BstDSI CCRYGG 1 cut(s) 1576
BstENI CCTNNNNNAGG 1 cut(s) 1598
BstF5I GGATG 7 cut(s) 486, 1560, 1632, 1834, 2016, 2428, 2503
BstFNI CGCG 1 cut(s) 1238
BstHHI GCGC 1 cut(s) 2540
BstKTI GATC 9 cut(s) 130, 601, 778, 1236, 1324, 1710, 2244, 2372, 2512
BstMAI GTCTC 5 cut(s) 277, 1100, 1268, 1857, 2591
BstMBI GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
BstMWI GCNNNNNNNGC 2 cut(s) 105, 2372
BstNI CCWGG 3 cut(s) 616, 854, 1300
BstNSI RCATGY 4 cut(s) 740, 1290, 1662, 2492
BstSCI CCNGG 8 cut(s) 337, 614, 829, 852, 1298, 1406, 1728, 1729
BstSLI GKGCMC 3 cut(s) 355, 836, 2047
BstUI CGCG 1 cut(s) 1238
BstV1I GCAGC 4 cut(s) 12, 90, 764, 2313
BstV2I GAAGAC 3 cut(s) 241, 1051, 2453
BstX2I RGATCY 2 cut(s) 1707, 2369
BstYI RGATCY 2 cut(s) 1707, 2369
BsuI GTATCC 1 cut(s) 1574
BsuRI GGCC 7 cut(s) 63, 403, 834, 1017, 1127, 1353, 1968
BtgI CCRYGG 1 cut(s) 1576
BtsCI GGATG 7 cut(s) 486, 1560, 1632, 1834, 2016, 2428, 2503
BtsI GCAGTG 1 cut(s) 397
BtsIMutI CAGTG 5 cut(s) 397, 1707, 1789, 1969, 2350
Cac8I GCNNGC 3 cut(s) 65, 505, 941
CaiI CAGNNNCTG 1 cut(s) 1859
CciI TCATGA 2 cut(s) 372, 778
CfoI GCGC 1 cut(s) 2540
Cfr10I RCCGGY 2 cut(s) 879, 939
Cfr13I GGNCC 8 cut(s) 62, 72, 832, 833, 1015, 1126, 1404, 2033
Cfr9I CCCGGG 1 cut(s) 1729
Csp6I GTAC 4 cut(s) 805, 1531, 1558, 1591
CviQI GTAC 4 cut(s) 805, 1531, 1558, 1591
DpnI GATC 9 cut(s) 129, 600, 777, 1235, 1323, 1709, 2243, 2371, 2511
DpnII GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
DraI TTTAAA 1 cut(s) 259
EaeI YGGCCR 2 cut(s) 401, 1351
Eam1104I CTCTTC 4 cut(s) 453, 561, 669, 762
EarI CTCTTC 4 cut(s) 453, 561, 669, 762
EciI GGCGGA 1 cut(s) 991
Ecl136II GAGCTC 1 cut(s) 1960
Eco130I CCWWGG 5 cut(s) 561, 787, 1457, 1576, 1599
Eco24I GRGCYC 2 cut(s) 836, 1962
Eco31I GGTCTC 2 cut(s) 1100, 2591
Eco47I GGWCC 3 cut(s) 72, 1404, 2033
Eco53kI GAGCTC 1 cut(s) 1960
Eco57I CTGAAG 4 cut(s) 690, 1406, 1836, 2375
Eco72I CACGTG 1 cut(s) 278
Eco88I CYCGRG 1 cut(s) 1729
EcoICRI GAGCTC 1 cut(s) 1960
EcoNI CCTNNNNNAGG 1 cut(s) 1598
EcoRII CCWGG 3 cut(s) 614, 852, 1298
EcoT14I CCWWGG 5 cut(s) 561, 787, 1457, 1576, 1599
EcoT22I ATGCAT 5 cut(s) 476, 523, 1013, 1525, 1660
EcoT38I GRGCYC 2 cut(s) 836, 1962
ErhI CCWWGG 5 cut(s) 561, 787, 1457, 1576, 1599
Esp3I CGTCTC 1 cut(s) 1857
FalI AAGNNNNNCTT 4 cut(s) 226, 258, 2121, 2153
FaqI GGGAC 3 cut(s) 85, 375, 1622
FauI CCCGC 2 cut(s) 30, 72
FauNDI CATATG 2 cut(s) 1752, 2038
FbaI TGATCA 3 cut(s) 775, 1321, 2509
FblI GTMKAC 3 cut(s) 212, 321, 2207
Fnu4HI GCNGC 6 cut(s) 26, 61, 79, 753, 944, 2327
FokI GGATG 7 cut(s) 493, 1547, 1639, 1821, 2023, 2435, 2490
FriOI GRGCYC 2 cut(s) 836, 1962
Fsp4HI GCNGC 6 cut(s) 26, 61, 79, 753, 944, 2327
FspBI CTAG 7 cut(s) 68, 227, 731, 1433, 1955, 2165, 2367
GlaI GCGC 1 cut(s) 2539
GluI GCNGC 6 cut(s) 26, 61, 79, 753, 944, 2327
GsuI CTGGAG 1 cut(s) 1881
HaeIII GGCC 7 cut(s) 63, 403, 834, 1017, 1127, 1353, 1968
HapII CCGG 8 cut(s) 29, 339, 830, 880, 940, 1142, 1407, 1730
HhaI GCGC 1 cut(s) 2540
Hin1I GRCGYC 1 cut(s) 215
Hin6I GCGC 1 cut(s) 2538
HinP1I GCGC 1 cut(s) 2538
HincII GTYRAC 2 cut(s) 213, 322
HindII GTYRAC 2 cut(s) 213, 322
HinfI GANTC 7 cut(s) 7, 209, 363, 488, 663, 1132, 1697
HpaII CCGG 8 cut(s) 29, 339, 830, 880, 940, 1142, 1407, 1730
HphI GGTGA 5 cut(s) 691, 1243, 1532, 1910, 2455
Hpy166II GTNNAC 8 cut(s) 213, 281, 322, 1558, 1726, 1787, 2045, 2208
Hpy8I GTNNAC 8 cut(s) 213, 281, 322, 1558, 1726, 1787, 2045, 2208
Hpy99I CGWCG 4 cut(s) 217, 534, 1470, 2315
HpyAV CCTTC 6 cut(s) 310, 389, 637, 1381, 1979, 2351
HpyCH4III ACNGT 3 cut(s) 933, 1723, 1791
HpyCH4IV ACGT 5 cut(s) 215, 277, 1737, 1892, 1945
HpyF10VI GCNNNNNNNGC 2 cut(s) 105, 2372
HpySE526I ACGT 5 cut(s) 215, 277, 1737, 1892, 1945
Hsp92I GRCGYC 1 cut(s) 215
HspAI GCGC 1 cut(s) 2538
KroI GCCGGC 1 cut(s) 939
KroNI GCCGGC 1 cut(s) 941
Ksp22I TGATCA 3 cut(s) 775, 1321, 2509
Kzo9I GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
LguI GCTCTTC 1 cut(s) 762
LmnI GCTCC 4 cut(s) 90, 1100, 1173, 2102
Lsp1109I GCAGC 4 cut(s) 12, 90, 764, 2313
LweI GCATC 5 cut(s) 508, 1843, 2001, 2353, 2512
MaeI CTAG 7 cut(s) 68, 227, 731, 1433, 1955, 2165, 2367
MaeII ACGT 5 cut(s) 215, 277, 1737, 1892, 1945
MaeIII GTNAC 2 cut(s) 556, 1717
MalI GATC 9 cut(s) 129, 600, 777, 1235, 1323, 1709, 2243, 2371, 2511
MboI GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
MflI RGATCY 2 cut(s) 1707, 2369
MhlI GDGCHC 5 cut(s) 355, 836, 918, 1962, 2047
MlsI TGGCCA 2 cut(s) 403, 1353
MluNI TGGCCA 2 cut(s) 403, 1353
MlyI GAGTC 3 cut(s) 218, 357, 497
MmeI TCCRAC 4 cut(s) 512, 929, 2068, 2500
Mox20I TGGCCA 2 cut(s) 403, 1353
Mph1103I ATGCAT 5 cut(s) 476, 523, 1013, 1525, 1660
MroNI GCCGGC 1 cut(s) 939
MroXI GAANNNNTTC 1 cut(s) 2076
MscI TGGCCA 2 cut(s) 403, 1353
MslI CAYNNNNRTG 2 cut(s) 479, 1828
Msp20I TGGCCA 2 cut(s) 403, 1353
MspA1I CMGCKG 1 cut(s) 25
MspCI CTTAAG 2 cut(s) 356, 697
MspI CCGG 8 cut(s) 29, 339, 830, 880, 940, 1142, 1407, 1730
MspR9I CCNGG 8 cut(s) 339, 616, 831, 854, 1300, 1408, 1730, 1731
MvaI CCWGG 3 cut(s) 616, 854, 1300
MvnI CGCG 1 cut(s) 1238
MwoI GCNNNNNNNGC 2 cut(s) 105, 2372
NaeI GCCGGC 1 cut(s) 941
NciI CCSGG 5 cut(s) 339, 831, 1408, 1730, 1731
NcoI CCATGG 1 cut(s) 1576
NdeI CATATG 2 cut(s) 1752, 2038
NdeII GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
NgoMIV GCCGGC 1 cut(s) 939
NlaIV GGNNCC 7 cut(s) 73, 834, 903, 938, 1276, 1393, 1463
NmuCI GTSAC 1 cut(s) 556
NsiI ATGCAT 5 cut(s) 476, 523, 1013, 1525, 1660
NspI RCATGY 4 cut(s) 740, 1290, 1662, 2492
NspV TTCGAA 1 cut(s) 848
PagI TCATGA 2 cut(s) 372, 778
PciSI GCTCTTC 1 cut(s) 762
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PdiI GCCGGC 1 cut(s) 941
PdmI GAANNNNTTC 1 cut(s) 2076
PfeI GAWTC 4 cut(s) 7, 663, 1132, 1697
PflMI CCANNNNNTGG 3 cut(s) 1069, 1349, 1605
PkrI GCNGC 6 cut(s) 27, 62, 80, 754, 945, 2328
PleI GAGTC 3 cut(s) 217, 357, 496
PmaCI CACGTG 1 cut(s) 278
PmlI CACGTG 1 cut(s) 278
PpsI GAGTC 3 cut(s) 217, 357, 496
Ppu21I YACGTR 1 cut(s) 278
PshBI ATTAAT 1 cut(s) 2114
Psp124BI GAGCTC 1 cut(s) 1962
Psp6I CCWGG 3 cut(s) 614, 852, 1298
PspCI CACGTG 1 cut(s) 278
PspGI CCWGG 3 cut(s) 614, 852, 1298
PspN4I GGNNCC 7 cut(s) 73, 834, 903, 938, 1276, 1393, 1463
PspOMI GGGCCC 1 cut(s) 832
PspPI GGNCC 8 cut(s) 62, 72, 832, 833, 1015, 1126, 1404, 2033
PstNI CAGNNNCTG 1 cut(s) 1859
PsuI RGATCY 2 cut(s) 1707, 2369
RsaI GTAC 4 cut(s) 806, 1532, 1559, 1592
RsaNI GTAC 4 cut(s) 805, 1531, 1558, 1591
RseI CAYNNNNRTG 2 cut(s) 479, 1828
SacI GAGCTC 1 cut(s) 1962
SalI GTCGAC 2 cut(s) 211, 320
SapI GCTCTTC 1 cut(s) 762
SatI GCNGC 6 cut(s) 26, 61, 79, 753, 944, 2327
Sau3AI GATC 9 cut(s) 127, 598, 775, 1233, 1321, 1707, 2241, 2369, 2509
Sau96I GGNCC 8 cut(s) 62, 72, 832, 833, 1015, 1126, 1404, 2033
SchI GAGTC 3 cut(s) 218, 357, 497
ScrFI CCNGG 8 cut(s) 339, 616, 831, 854, 1300, 1408, 1730, 1731
SduI GDGCHC 5 cut(s) 355, 836, 918, 1962, 2047
SfaNI GCATC 5 cut(s) 508, 1843, 2001, 2353, 2512
SfuI TTCGAA 1 cut(s) 848
SinI GGWCC 3 cut(s) 72, 1404, 2033
SmaI CCCGGG 1 cut(s) 1731
SmiMI CAYNNNNRTG 2 cut(s) 479, 1828
SmlI CTYRAG 6 cut(s) 263, 304, 356, 365, 697, 2052
SmoI CTYRAG 6 cut(s) 263, 304, 356, 365, 697, 2052
SsiI CCGC 5 cut(s) 23, 60, 65, 943, 976
SspMI CTAG 7 cut(s) 68, 227, 731, 1433, 1955, 2165, 2367
SstI GAGCTC 1 cut(s) 1962
StyD4I CCNGG 8 cut(s) 337, 614, 829, 852, 1298, 1406, 1728, 1729
StyI CCWWGG 5 cut(s) 561, 787, 1457, 1576, 1599
TaaI ACNGT 3 cut(s) 933, 1723, 1791
TaiI ACGT 5 cut(s) 218, 280, 1740, 1895, 1948
TaqII GACCGA 1 cut(s) 2615
TatI WGTACW 2 cut(s) 804, 1557
TauI GCSGC 2 cut(s) 63, 946
TfiI GAWTC 4 cut(s) 7, 663, 1132, 1697
TscAI CASTG 5 cut(s) 397, 1707, 1789, 1969, 2350
TseFI GTSAC 1 cut(s) 556
TseI GCWGC 4 cut(s) 25, 78, 752, 2326
Tsp45I GTSAC 1 cut(s) 556
TspGWI ACGGA 1 cut(s) 1454
TspMI CCCGGG 1 cut(s) 1729
TspRI CASTG 5 cut(s) 397, 1707, 1789, 1969, 2350
Van91I CCANNNNNTGG 3 cut(s) 1069, 1349, 1605
Vha464I CTTAAG 2 cut(s) 356, 697
VneI GTGCAC 1 cut(s) 2043
VpaK11BI GGWCC 3 cut(s) 72, 1404, 2033
VspI ATTAAT 1 cut(s) 2114
XagI CCTNNNNNAGG 1 cut(s) 1598
XapI RAATTY 4 cut(s) 578, 591, 726, 1031
XbaI TCTAGA 2 cut(s) 730, 1954
XceI RCATGY 4 cut(s) 740, 1290, 1662, 2492
XcmI CCANNNNNNNNNTGG 2 cut(s) 2411, 2416
XmaI CCCGGG 1 cut(s) 1729
XmiI GTMKAC 3 cut(s) 212, 321, 2207
XmnI GAANNNNTTC 1 cut(s) 2076
XspI CTAG 7 cut(s) 68, 227, 731, 1433, 1955, 2165, 2367
ZraI GACGTC 1 cut(s) 216
Zsp2I ATGCAT 5 cut(s) 476, 523, 1013, 1525, 1660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.