RchiOBHm_Chr3g0455641

Respiratory burst

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0005589
Physical Location & Seq
Forward (+)
5311755 .. 5316513
4759 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42256

Sequence Viewer

Length: 2646 bp
ATGGAGATTCAAGCAGAAAACCCGCTGTCGGATAAAGAGAGCAAACGGGTCGGGCAGGGCGGCAAGATGAGGAGCAACAGCAACAGAAGCACAATGTTCAAAGAAGACGATCAATGCTATGTGGAAGTGGCACTCGATGGTTGCGACGACAATACCTTTGTGCTTCGGAACATCAGAGGAGCTGAACCTGAGTCGACGTCAGCAAGGCTAGAGAGAAGACGATCCGTTGCTTCTCAACTCTCTTTTAAACTCAAGAAAGTCACACGTGAACTGAAACGCATGAAATCTTCCTTGAGCTTCAAGAAGGTCGACAGGCCCACCAAGCCCGGTATTGCTCGTGCCCTTAAGGGACTCAAGCTCATGACCAAAAATGTGTGCAGTGAAGGTTGGCCAGAGATCGAAATAAGGTTTGATGAATTGGCTGTCGATGGAACTCTTCCAAAATCAGTCTTTGCTCAATGCATAGGGATGAAAGAGTCGAGTGAGTTTGCTTGCGAAGTATTCGATGCATTGGCTCGTCGGAGAGGAATAACATCGTGTTGTGTGACCAAGGAAGAGTTGAGAGAATTTTGGGAACAAATTTCAGATCACAGCTTCAATGCCAGGCTTCAAACCTTCTTTGACATGGTGGATAAAAATGCAGATGGTCGAATCTCTGAAGAAGAGGTGAAAGAGATTATTACCTTAAGTGCCGCTGCTAATAAGCTGTCAAAAATTCTAGAGCATGCTGAGGAATATGCAGCATTGATTATGGAAGAGCTTGATCATGACAACCTTGGATATATTGATTTTTACCAATTTGGGCCTGGACTGCAGTTGTACAACTTGAAAATGCTACTTCTTCCGGACCCAACCCAATCTTCAAACCTGGAAACAGACAGCTACATTCAGAGCCGGTTGCTAAGTGAAAAGCTGGTTCCGACCAAAGAGCACAACCCTATAAGGCGGTGGTGCCGGCGGCTGTCCTACTTTGTTGAGGATAACTGGAGGCGGATTTGGGTCATTCTGCTATGGCTTTTGATATGCATGGGCCTCTTTGCTTGGAAATTCATTCAGTATAGACAAAGGGAGGTCTTCCATGTAATGGGCTATTGTGTGTGCATTGCCAAAGGTGGAGCTGAGACCCTAAAGTTTAACATGGCCCTGATTCTTCTTCCGGTGTGTAGAAATACAATTACTTGGCTAAGAAGCAAGACCCAGTTAGGAGGTGTAGTTCCATTTGATGACAATATCAATTTTCATAAGGTGATCGCGTTTGGAATTGCAGTTGGGGTCAGTCTCCATGCCGGTTCCCATCTTACATGCGACTTCCCCAGGCTACTACATTCAACCAATGATCAATACGACAAGATGAAGCCATTTTTCGGCCAAAAACGACCCGACAACTATTGGTGGTTTGTGAAGGGAACCGAGGGCTGGACCGGGGTGGTTATGGTGGCACTAATGCTAGTTGCATACACATTGGCTCAACCTTGGTTCCGTCGCAATCGACTAAGAAACCTCCCTAAAACCCTAAAGAAAGTTACTGGGTTCAATGCGTTTTGGTACTCCCATCACCTCTTTATCATTGTGTACATCCTCCTTATTATCCATGGATACTTCCTCTACCTCTCCAAGGACTGGGACAAGAAAACAACATGGATGTATCTGGCTTTCCCAGTAATAATGTATGCATGTGAGCGTTTGCTTCGTGCTTTCAGGTCTGGATATGAATCAGTGAAGATCTTAAAGGTTACTGTTTACCCGGGAAACGTATTGGCACTCCATATGTCAAAACCACAGGGATTAAAATATACCAGTGGACAGTACATTTACATAAATTGTTCTGCTATTTCCTCATTTCAATGGCATCCATTCTCAATTACTTCGGCTCCTGGAGACGACTATCTAAGTGTTCATATTCGCACGTTGGGTGATTGGACATCTCAGCTCAAATACATTTTCTCTCGGGTTTGCGAACGTCCTCCTCTAGAGCTCAGTGGCCTTCTAAGAGCTGATATTGAACAACCTGATATACAACTTAGGATGCCAAGACTTCTTATTGATGGTCCATATGGTGCACCAGCTCAAGACTACAAAAACTACGAAGTTCTTCTACTTGTTGGACTTGGAATTGGAGCAACTCCATTAATAAGCATACTCAAAGATGTGCTTAACAACATTAAGCGACAGAAAGAACTAGACGCTCAAATGTTGGTGGAAAGTGGTGTTAAGAGAAAGTCTACTTTTGCAACAAAACGTGCTTATTTCTACTGGATCACAAGAGAGCAAGGCTCGTTCGAGTGGTTTAGGGGTGTGATGAATGAGGTCGCAGAAAATGACCTCGACGGGGTGATTGAGATGCACAACTACTGCACCAGTGTCTATGAAGAAGGAGATGCTAGATCTGCTCTGATTACTATGCTTCAGTCTATAAACCATGCCAAAAATGGTGTGGATGTTGTATCAGGAACGAGGGTGAAGACGCATTTTGCAAGACCAAAATGGCGTAATGTTTTTAAGCATGTGGCAGTAAACCATCCTGATAAAAAAGTTGGAGTGTTTTATTGTGGCGCACATGGATTAGTTGGGGAGTTAAAGATGTTAGCTAAAGACTTTTCCAGAAAAACTGAGACCGAGTTTGATTTCCACAAAGAGAACTTTTAG

Protein Analysis

881

Amino Acids

101.46

Weight (kDa)

9.01

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 107 - 201 2e-32 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 202 - 267 1.5e-06 EF-hand domain pair
Ferric_reduct PF01794 379 - 529 9e-12 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 572 - 689 4.3e-35 FAD-binding domain
NAD_binding_6 PF08030 695 - 862 6.9e-50 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 951
AccB7I CCANNNNNTGG 2 cut(s) 1084, 1620
AccI GTMKAC 3 cut(s) 194, 309, 2222
AccII CGCG 1 cut(s) 1253
AccIII TCCGGA 1 cut(s) 844
AciI CCGC 6 cut(s) 23, 60, 693, 946, 958, 991
AclWI GGATC 2 cut(s) 216, 2264
AcoI YGGCCR 2 cut(s) 389, 1366
AcsI RAATTY 4 cut(s) 566, 579, 714, 1046
AcuI CTGAAG 2 cut(s) 678, 2390
AcvI CACGTG 1 cut(s) 266
AcyI GRCGYC 1 cut(s) 197
AfaI GTAC 4 cut(s) 821, 1547, 1574, 1808
AfiI CCNNNNNNNGG 7 cut(s) 28, 1084, 1364, 1416, 1615, 1620, 2329
AflII CTTAAG 2 cut(s) 344, 685
AflIII ACRYGT 1 cut(s) 263
AjnI CCWGG 5 cut(s) 602, 805, 867, 1313, 1873
AjuI GAANNNNNNNTTGG 2 cut(s) 844, 876
AloI GAACNNNNNNTCC 2 cut(s) 1197, 1229
Alw21I GWGCWC 3 cut(s) 933, 1977, 2062
Alw26I GTCTC 4 cut(s) 1115, 1283, 1872, 2606
Alw44I GTGCAC 1 cut(s) 2058
AlwI GGATC 2 cut(s) 216, 2264
Ama87I CYCGRG 2 cut(s) 1744, 1947
Aor13HI TCCGGA 1 cut(s) 844
AoxI GGCC 7 cut(s) 314, 389, 803, 1030, 1140, 1366, 1981
ApaLI GTGCAC 1 cut(s) 2058
ApeKI GCWGC 2 cut(s) 695, 740
ApoI RAATTY 4 cut(s) 566, 579, 714, 1046
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
AseI ATTAAT 1 cut(s) 2129
Asp700I GAANNNNTTC 1 cut(s) 2091
AspLEI GCGC 1 cut(s) 2555
AspS9I GGNCC 7 cut(s) 315, 803, 847, 1030, 1141, 1419, 2048
AsuC2I CCSGG 4 cut(s) 327, 1423, 1745, 1746
AsuHPI GGTGA 6 cut(s) 679, 1258, 1547, 1925, 2344, 2470
AvaI CYCGRG 2 cut(s) 1744, 1947
AvaII GGWCC 3 cut(s) 847, 1419, 2048
BaeGI GKGCMC 2 cut(s) 343, 2062
BalI TGGCCA 1 cut(s) 391
BanI GGYRCC 1 cut(s) 951
BanII GRGCYC 1 cut(s) 1977
BarI GAAGNNNNNNTAC 2 cut(s) 2079, 2111
BauI CACGAG 1 cut(s) 336
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 4 cut(s) 111, 223, 1066, 2468
Bbv12I GWGCWC 3 cut(s) 933, 1977, 2062
BbvCI CCTCAGC 1 cut(s) 729
BbvI GCAGC 2 cut(s) 682, 752
BccI CCATC 7 cut(s) 131, 422, 638, 1302, 1560, 2039, 2526
BcgI CGANNNNNNTGC 2 cut(s) 31, 65
BciT130I CCWGG 5 cut(s) 604, 807, 869, 1315, 1875
BciVI GTATCC 1 cut(s) 1589
BclI TGATCA 2 cut(s) 763, 1336
BcnI CCSGG 4 cut(s) 327, 1423, 1745, 1746
BcoDI GTCTC 4 cut(s) 1115, 1283, 1872, 2606
BfaI CTAG 6 cut(s) 209, 719, 1448, 1970, 2180, 2382
BfmI CTRYAG 1 cut(s) 812
BfrI CTTAAG 2 cut(s) 344, 685
BfuI GTATCC 1 cut(s) 1589
BglII AGATCT 2 cut(s) 1722, 2384
BisI GCNGC 5 cut(s) 61, 693, 696, 741, 959
BlsI GCNGC 5 cut(s) 62, 694, 697, 742, 960
Bme1390I CCNGG 9 cut(s) 327, 604, 807, 869, 1315, 1423, 1745, 1746, 1875
Bme18I GGWCC 3 cut(s) 847, 1419, 2048
BmeT110I CYCGRG 2 cut(s) 1744, 1947
BmgT120I GGNCC 7 cut(s) 315, 803, 847, 1030, 1141, 1419, 2048
BmiI GGNNCC 7 cut(s) 849, 918, 953, 1291, 1408, 1478, 1872
BmrFI CCNGG 9 cut(s) 327, 604, 807, 869, 1315, 1423, 1745, 1746, 1875
BmrI ACTGGG 4 cut(s) 1192, 1536, 1630, 1652
BmsI GCATC 5 cut(s) 496, 1858, 2016, 2331, 2368
BmuI ACTGGG 4 cut(s) 1192, 1536, 1630, 1652
BpiI GAAGAC 4 cut(s) 111, 223, 1066, 2468
BplI GAGNNNNNCTC 2 cut(s) 2258, 2290
BpmI CTGGAG 2 cut(s) 1006, 1896
Bpu10I CCTNAGC 1 cut(s) 729
BpuEI CTTGAG 4 cut(s) 236, 313, 338, 2052
BpuMI CCSGG 4 cut(s) 327, 1423, 1745, 1746
BsaAI YACGTR 1 cut(s) 266
BsaBI GATNNNNATC 1 cut(s) 1711
BsaHI GRCGYC 1 cut(s) 197
BsaI GGTCTC 2 cut(s) 1115, 2606
BsaJI CCNNGG 9 cut(s) 549, 775, 1313, 1410, 1422, 1472, 1591, 1614, 1744
BsaWI WCCGGW 2 cut(s) 844, 1156
BsaXI ACNNNNNCTCC 4 cut(s) 1197, 1227, 1855, 1885
Bsc4I CCNNNNNNNGG 7 cut(s) 28, 1084, 1364, 1416, 1615, 1620, 2329
Bse118I RCCGGY 3 cut(s) 894, 954, 1286
Bse1I ACTGG 8 cut(s) 989, 1198, 1531, 1625, 1658, 1797, 2258, 2358
Bse3DI GCAATG 1 cut(s) 1101
Bse8I GATNNNNATC 1 cut(s) 1711
BseAI TCCGGA 1 cut(s) 844
BseBI CCWGG 5 cut(s) 604, 807, 869, 1315, 1875
BseDI CCNNGG 9 cut(s) 549, 775, 1313, 1410, 1422, 1472, 1591, 1614, 1744
BseGI GGATG 7 cut(s) 474, 1575, 1647, 1849, 2031, 2443, 2518
BseJI GATNNNNATC 1 cut(s) 1711
BseLI CCNNNNNNNGG 7 cut(s) 28, 1084, 1364, 1416, 1615, 1620, 2329
BseMI GCAATG 1 cut(s) 1101
BseMII CTCAG 6 cut(s) 180, 720, 1110, 1940, 1990, 2601
BseNI ACTGG 8 cut(s) 989, 1198, 1531, 1625, 1658, 1797, 2258, 2358
BseRI GAGGAG 3 cut(s) 85, 192, 1956
BseSI GKGCMC 2 cut(s) 343, 2062
BseXI GCAGC 2 cut(s) 682, 752
BsgI GTGCAG 2 cut(s) 397, 2338
Bsh1236I CGCG 1 cut(s) 1253
BshFI GGCC 7 cut(s) 316, 391, 805, 1032, 1142, 1368, 1983
BshNI GGYRCC 1 cut(s) 951
BsiHKAI GWGCWC 3 cut(s) 933, 1977, 2062
BsiHKCI CYCGRG 2 cut(s) 1744, 1947
BsiSI CCGG 8 cut(s) 327, 845, 895, 955, 1157, 1287, 1422, 1745
BslFI GGGAC 2 cut(s) 363, 1637
BslI CCNNNNNNNGG 7 cut(s) 28, 1084, 1364, 1416, 1615, 1620, 2329
BsmAI GTCTC 4 cut(s) 1115, 1283, 1872, 2606
BsmBI CGTCTC 1 cut(s) 1872
BsmFI GGGAC 2 cut(s) 363, 1637
BsnI GGCC 7 cut(s) 316, 391, 805, 1032, 1142, 1368, 1983
Bso31I GGTCTC 2 cut(s) 1115, 2606
BsoBI CYCGRG 2 cut(s) 1744, 1947
Bsp1286I GDGCHC 4 cut(s) 343, 933, 1977, 2062
Bsp13I TCCGGA 1 cut(s) 844
Bsp1407I TGTACA 2 cut(s) 819, 1572
Bsp19I CCATGG 1 cut(s) 1591
BspACI CCGC 6 cut(s) 23, 60, 693, 946, 958, 991
BspANI GGCC 7 cut(s) 316, 391, 805, 1032, 1142, 1368, 1983
BspCNI CTCAG 6 cut(s) 181, 721, 1111, 1939, 1989, 2602
BspEI TCCGGA 1 cut(s) 844
BspFNI CGCG 1 cut(s) 1253
BspHI TCATGA 2 cut(s) 360, 766
BspLI GGNNCC 7 cut(s) 849, 918, 953, 1291, 1408, 1478, 1872
BspMAI CTGCAG 1 cut(s) 816
BspPI GGATC 2 cut(s) 216, 2264
BspQI GCTCTTC 1 cut(s) 750
BspT107I GGYRCC 1 cut(s) 951
BspTI CTTAAG 2 cut(s) 344, 685
BspTNI GGTCTC 2 cut(s) 1115, 2606
BsrDI GCAATG 1 cut(s) 1101
BsrFI RCCGGY 3 cut(s) 894, 954, 1286
BsrGI TGTACA 2 cut(s) 819, 1572
BsrI ACTGG 8 cut(s) 989, 1198, 1531, 1625, 1658, 1797, 2258, 2358
BssAI RCCGGY 3 cut(s) 894, 954, 1286
BssECI CCNNGG 9 cut(s) 549, 775, 1313, 1410, 1422, 1472, 1591, 1614, 1744
BssNI GRCGYC 1 cut(s) 197
BssSI CACGAG 1 cut(s) 336
BssT1I CCWWGG 5 cut(s) 549, 775, 1472, 1591, 1614
Bst2BI CACGAG 1 cut(s) 336
Bst2UI CCWGG 5 cut(s) 604, 807, 869, 1315, 1875
Bst4CI ACNGT 2 cut(s) 1738, 1806
Bst6I CTCTTC 4 cut(s) 441, 549, 657, 750
BstACI GRCGYC 1 cut(s) 197
BstAFI CTTAAG 2 cut(s) 344, 685
BstAUI TGTACA 2 cut(s) 819, 1572
BstBAI YACGTR 1 cut(s) 266
BstC8I GCNNGC 3 cut(s) 493, 726, 956
BstDSI CCRYGG 1 cut(s) 1591
BstENI CCTNNNNNAGG 1 cut(s) 1613
BstF5I GGATG 7 cut(s) 474, 1575, 1647, 1849, 2031, 2443, 2518
BstFNI CGCG 1 cut(s) 1253
BstHHI GCGC 1 cut(s) 2555
BstMAI GTCTC 4 cut(s) 1115, 1283, 1872, 2606
BstMWI GCNNNNNNNGC 4 cut(s) 87, 322, 811, 2387
BstNI CCWGG 5 cut(s) 604, 807, 869, 1315, 1875
BstNSI RCATGY 4 cut(s) 728, 1305, 1677, 2507
BstSCI CCNGG 9 cut(s) 325, 602, 805, 867, 1313, 1421, 1743, 1744, 1873
BstSFI CTRYAG 1 cut(s) 812
BstSLI GKGCMC 2 cut(s) 343, 2062
BstUI CGCG 1 cut(s) 1253
BstV1I GCAGC 2 cut(s) 682, 752
BstV2I GAAGAC 4 cut(s) 111, 223, 1066, 2468
BstX2I RGATCY 2 cut(s) 1722, 2384
BstYI RGATCY 2 cut(s) 1722, 2384
BsuI GTATCC 1 cut(s) 1589
BsuRI GGCC 7 cut(s) 316, 391, 805, 1032, 1142, 1368, 1983
BtgI CCRYGG 1 cut(s) 1591
BtsCI GGATG 7 cut(s) 474, 1575, 1647, 1849, 2031, 2443, 2518
BtsI GCAGTG 1 cut(s) 385
BtsIMutI CAGTG 5 cut(s) 385, 1722, 1804, 1984, 2365
Cac8I GCNNGC 3 cut(s) 493, 726, 956
CciI TCATGA 2 cut(s) 360, 766
CfoI GCGC 1 cut(s) 2555
Cfr10I RCCGGY 3 cut(s) 894, 954, 1286
Cfr13I GGNCC 7 cut(s) 315, 803, 847, 1030, 1141, 1419, 2048
Cfr9I CCCGGG 1 cut(s) 1744
CseI GACGC 2 cut(s) 2192, 2473
Csp6I GTAC 4 cut(s) 820, 1546, 1573, 1807
CviQI GTAC 4 cut(s) 820, 1546, 1573, 1807
DraI TTTAAA 1 cut(s) 247
EaeI YGGCCR 2 cut(s) 389, 1366
Eam1104I CTCTTC 4 cut(s) 441, 549, 657, 750
EarI CTCTTC 4 cut(s) 441, 549, 657, 750
EciI GGCGGA 1 cut(s) 1006
Ecl136II GAGCTC 1 cut(s) 1975
Eco130I CCWWGG 5 cut(s) 549, 775, 1472, 1591, 1614
Eco24I GRGCYC 1 cut(s) 1977
Eco31I GGTCTC 2 cut(s) 1115, 2606
Eco47I GGWCC 3 cut(s) 847, 1419, 2048
Eco53kI GAGCTC 1 cut(s) 1975
Eco57I CTGAAG 2 cut(s) 678, 2390
Eco72I CACGTG 1 cut(s) 266
Eco88I CYCGRG 2 cut(s) 1744, 1947
EcoICRI GAGCTC 1 cut(s) 1975
EcoNI CCTNNNNNAGG 1 cut(s) 1613
EcoRII CCWGG 5 cut(s) 602, 805, 867, 1313, 1873
EcoT14I CCWWGG 5 cut(s) 549, 775, 1472, 1591, 1614
EcoT22I ATGCAT 4 cut(s) 464, 511, 1028, 1675
EcoT38I GRGCYC 1 cut(s) 1977
ErhI CCWWGG 5 cut(s) 549, 775, 1472, 1591, 1614
Esp3I CGTCTC 1 cut(s) 1872
FalI AAGNNNNNCTT 2 cut(s) 2136, 2168
FaqI GGGAC 2 cut(s) 363, 1637
FauI CCCGC 1 cut(s) 30
FauNDI CATATG 2 cut(s) 1767, 2053
FbaI TGATCA 2 cut(s) 763, 1336
FblI GTMKAC 3 cut(s) 194, 309, 2222
Fnu4HI GCNGC 5 cut(s) 61, 693, 696, 741, 959
FokI GGATG 7 cut(s) 481, 1562, 1654, 1836, 2038, 2450, 2505
FriOI GRGCYC 1 cut(s) 1977
Fsp4HI GCNGC 5 cut(s) 61, 693, 696, 741, 959
FspBI CTAG 6 cut(s) 209, 719, 1448, 1970, 2180, 2382
GlaI GCGC 1 cut(s) 2554
GluI GCNGC 5 cut(s) 61, 693, 696, 741, 959
GsuI CTGGAG 2 cut(s) 1006, 1896
HaeIII GGCC 7 cut(s) 316, 391, 805, 1032, 1142, 1368, 1983
HapII CCGG 8 cut(s) 327, 845, 895, 955, 1157, 1287, 1422, 1745
HgaI GACGC 2 cut(s) 2192, 2473
HhaI GCGC 1 cut(s) 2555
Hin1I GRCGYC 1 cut(s) 197
Hin6I GCGC 1 cut(s) 2553
HinP1I GCGC 1 cut(s) 2553
HincII GTYRAC 2 cut(s) 195, 310
HindII GTYRAC 2 cut(s) 195, 310
HinfI GANTC 7 cut(s) 7, 191, 351, 476, 651, 1147, 1712
HpaII CCGG 8 cut(s) 327, 845, 895, 955, 1157, 1287, 1422, 1745
HphI GGTGA 6 cut(s) 679, 1258, 1547, 1925, 2344, 2470
Hpy166II GTNNAC 9 cut(s) 195, 269, 310, 1573, 1741, 1802, 2060, 2223, 2515
Hpy188I TCNGA 9 cut(s) 31, 168, 176, 522, 586, 658, 891, 921, 2394
Hpy8I GTNNAC 9 cut(s) 195, 269, 310, 1573, 1741, 1802, 2060, 2223, 2515
Hpy99I CGWCG 5 cut(s) 149, 199, 522, 1485, 2330
HpyAV CCTTC 6 cut(s) 298, 377, 625, 1396, 1994, 2366
HpyCH4III ACNGT 2 cut(s) 1738, 1806
HpyCH4IV ACGT 6 cut(s) 197, 265, 1752, 1907, 1960, 2239
HpyF10VI GCNNNNNNNGC 4 cut(s) 87, 322, 811, 2387
HpySE526I ACGT 6 cut(s) 197, 265, 1752, 1907, 1960, 2239
Hsp92I GRCGYC 1 cut(s) 197
HspAI GCGC 1 cut(s) 2553
Kpn2I TCCGGA 1 cut(s) 844
KroI GCCGGC 1 cut(s) 954
KroNI GCCGGC 1 cut(s) 956
Ksp22I TGATCA 2 cut(s) 763, 1336
LguI GCTCTTC 1 cut(s) 750
LmnI GCTCC 5 cut(s) 72, 179, 1115, 1876, 2117
Lsp1109I GCAGC 2 cut(s) 682, 752
LweI GCATC 5 cut(s) 496, 1858, 2016, 2331, 2368
MaeI CTAG 6 cut(s) 209, 719, 1448, 1970, 2180, 2382
MaeII ACGT 6 cut(s) 197, 265, 1752, 1907, 1960, 2239
MaeIII GTNAC 4 cut(s) 259, 544, 1522, 1732
MflI RGATCY 2 cut(s) 1722, 2384
MhlI GDGCHC 4 cut(s) 343, 933, 1977, 2062
MlsI TGGCCA 1 cut(s) 391
MluNI TGGCCA 1 cut(s) 391
MlyI GAGTC 3 cut(s) 200, 345, 485
MmeI TCCRAC 5 cut(s) 9, 500, 944, 2083, 2515
Mox20I TGGCCA 1 cut(s) 391
Mph1103I ATGCAT 4 cut(s) 464, 511, 1028, 1675
MroI TCCGGA 1 cut(s) 844
MroNI GCCGGC 1 cut(s) 954
MroXI GAANNNNTTC 1 cut(s) 2091
MscI TGGCCA 1 cut(s) 391
MslI CAYNNNNRTG 2 cut(s) 467, 1843
Msp20I TGGCCA 1 cut(s) 391
MspA1I CMGCKG 2 cut(s) 25, 695
MspCI CTTAAG 2 cut(s) 344, 685
MspI CCGG 8 cut(s) 327, 845, 895, 955, 1157, 1287, 1422, 1745
MspR9I CCNGG 9 cut(s) 327, 604, 807, 869, 1315, 1423, 1745, 1746, 1875
MvaI CCWGG 5 cut(s) 604, 807, 869, 1315, 1875
MvnI CGCG 1 cut(s) 1253
MwoI GCNNNNNNNGC 4 cut(s) 87, 322, 811, 2387
NaeI GCCGGC 1 cut(s) 956
NciI CCSGG 4 cut(s) 327, 1423, 1745, 1746
NcoI CCATGG 1 cut(s) 1591
NdeI CATATG 2 cut(s) 1767, 2053
NgoMIV GCCGGC 1 cut(s) 954
NlaIV GGNNCC 7 cut(s) 849, 918, 953, 1291, 1408, 1478, 1872
NmuCI GTSAC 2 cut(s) 259, 544
NsiI ATGCAT 4 cut(s) 464, 511, 1028, 1675
NspI RCATGY 4 cut(s) 728, 1305, 1677, 2507
PaeI GCATGC 1 cut(s) 728
PagI TCATGA 2 cut(s) 360, 766
PciSI GCTCTTC 1 cut(s) 750
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PdiI GCCGGC 1 cut(s) 956
PdmI GAANNNNTTC 1 cut(s) 2091
PfeI GAWTC 4 cut(s) 7, 651, 1147, 1712
PflMI CCANNNNNTGG 2 cut(s) 1084, 1620
PfoI TCCNGGA 1 cut(s) 1873
PkrI GCNGC 5 cut(s) 62, 694, 697, 742, 960
PleI GAGTC 3 cut(s) 199, 345, 484
PmaCI CACGTG 1 cut(s) 266
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 3 cut(s) 199, 345, 484
Ppu21I YACGTR 1 cut(s) 266
PshBI ATTAAT 1 cut(s) 2129
Psp124BI GAGCTC 1 cut(s) 1977
Psp6I CCWGG 5 cut(s) 602, 805, 867, 1313, 1873
PspCI CACGTG 1 cut(s) 266
PspGI CCWGG 5 cut(s) 602, 805, 867, 1313, 1873
PspN4I GGNNCC 7 cut(s) 849, 918, 953, 1291, 1408, 1478, 1872
PspPI GGNCC 7 cut(s) 315, 803, 847, 1030, 1141, 1419, 2048
PstI CTGCAG 1 cut(s) 816
PsuI RGATCY 2 cut(s) 1722, 2384
RsaI GTAC 4 cut(s) 821, 1547, 1574, 1808
RsaNI GTAC 4 cut(s) 820, 1546, 1573, 1807
RseI CAYNNNNRTG 2 cut(s) 467, 1843
SacI GAGCTC 1 cut(s) 1977
SalI GTCGAC 2 cut(s) 193, 308
SapI GCTCTTC 1 cut(s) 750
SatI GCNGC 5 cut(s) 61, 693, 696, 741, 959
Sau96I GGNCC 7 cut(s) 315, 803, 847, 1030, 1141, 1419, 2048
SchI GAGTC 3 cut(s) 200, 345, 485
ScrFI CCNGG 9 cut(s) 327, 604, 807, 869, 1315, 1423, 1745, 1746, 1875
SduI GDGCHC 4 cut(s) 343, 933, 1977, 2062
SfaNI GCATC 5 cut(s) 496, 1858, 2016, 2331, 2368
SfcI CTRYAG 1 cut(s) 812
SinI GGWCC 3 cut(s) 847, 1419, 2048
SmaI CCCGGG 1 cut(s) 1746
SmiMI CAYNNNNRTG 2 cut(s) 467, 1843
SmlI CTYRAG 6 cut(s) 251, 292, 344, 353, 685, 2067
SmoI CTYRAG 6 cut(s) 251, 292, 344, 353, 685, 2067
SphI GCATGC 1 cut(s) 728
SsiI CCGC 6 cut(s) 23, 60, 693, 946, 958, 991
SspMI CTAG 6 cut(s) 209, 719, 1448, 1970, 2180, 2382
SstI GAGCTC 1 cut(s) 1977
StyD4I CCNGG 9 cut(s) 325, 602, 805, 867, 1313, 1421, 1743, 1744, 1873
StyI CCWWGG 5 cut(s) 549, 775, 1472, 1591, 1614
TaaI ACNGT 2 cut(s) 1738, 1806
TaiI ACGT 6 cut(s) 200, 268, 1755, 1910, 1963, 2242
TaqII GACCGA 1 cut(s) 2630
TatI WGTACW 3 cut(s) 819, 1572, 1806
TauI GCSGC 3 cut(s) 63, 695, 961
TfiI GAWTC 4 cut(s) 7, 651, 1147, 1712
TscAI CASTG 5 cut(s) 385, 1722, 1804, 1984, 2365
TseFI GTSAC 2 cut(s) 259, 544
TseI GCWGC 2 cut(s) 695, 740
Tsp45I GTSAC 2 cut(s) 259, 544
TspGWI ACGGA 2 cut(s) 214, 1469
TspMI CCCGGG 1 cut(s) 1744
TspRI CASTG 5 cut(s) 385, 1722, 1804, 1984, 2365
Van91I CCANNNNNTGG 2 cut(s) 1084, 1620
Vha464I CTTAAG 2 cut(s) 344, 685
VneI GTGCAC 1 cut(s) 2058
VpaK11BI GGWCC 3 cut(s) 847, 1419, 2048
VspI ATTAAT 1 cut(s) 2129
XagI CCTNNNNNAGG 1 cut(s) 1613
XapI RAATTY 4 cut(s) 566, 579, 714, 1046
XbaI TCTAGA 2 cut(s) 718, 1969
XceI RCATGY 4 cut(s) 728, 1305, 1677, 2507
XcmI CCANNNNNNNNNTGG 3 cut(s) 803, 2426, 2431
XmaI CCCGGG 1 cut(s) 1744
XmiI GTMKAC 3 cut(s) 194, 309, 2222
XmnI GAANNNNTTC 1 cut(s) 2091
XspI CTAG 6 cut(s) 209, 719, 1448, 1970, 2180, 2382
ZraI GACGTC 1 cut(s) 198
Zsp2I ATGCAT 4 cut(s) 464, 511, 1028, 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.