ATP binding DNA binding helicase nucleic acid binding protein binding zinc ion binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G61140 AT1G61140 AT1G61140 |
| fragaria_vesca | FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 |
| malus_domestica | MD05G1322200.v1.1 MD10G1300200.v1.1 |
| prunus_persica | Prupe.4G040600_v2.0.a1 Prupe.4G040600_v2.0.a1 |
| pyrus_communis | pycom05g29650 pycom10g25290 |
| rosa_chinensis | RchiOBHm_Chr5g0007521 |
| rosa_laevigata | RLG00000031464 |
| rosa_multiflora | Rmu_co8522595.1_g000001 Rmu_ssc0000182.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00068890 |
| rosa_rugosa | Rorug04G0427800 Rorug04G0427900 Rorug04G0428000 |
| rosa_samantha | Rh5AG055800 Rh5BG053400 Rh5CG063200 Rh5DG052400 |
| rosa_wichuraiana | Rw5G005420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 1762, 3078 |
| Acc16I | TGCGCA | 1 cut(s) | 1096 |
| Acc36I | ACCTGC | 1 cut(s) | 3172 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 237, 607, 1079 |
| AccI | GTMKAC | 2 cut(s) | 1766, 1995 |
| AccII | CGCG | 3 cut(s) | 2129, 2847, 3086 |
| AciI | CCGC | 3 cut(s) | 35, 1677, 3084 |
| AclI | AACGTT | 2 cut(s) | 2327, 2384 |
| AclWI | GGATC | 7 cut(s) | 229, 1226, 1575, 2015, 2028, 2300, 2975 |
| AcoI | YGGCCR | 2 cut(s) | 595, 2638 |
| AcsI | RAATTY | 9 cut(s) | 59, 440, 523, 790, 1421, 1546, 2260, 2892, 3010 |
| AcuI | CTGAAG | 6 cut(s) | 765, 834, 1455, 1608, 2272, 2961 |
| AdeI | CACNNNGTG | 2 cut(s) | 281, 2801 |
| AfaI | GTAC | 3 cut(s) | 2971, 3321, 3342 |
| AfeI | AGCGCT | 1 cut(s) | 1746 |
| AflII | CTTAAG | 2 cut(s) | 2297, 3272 |
| AflIII | ACRYGT | 1 cut(s) | 757 |
| AhlI | ACTAGT | 1 cut(s) | 1922 |
| AjnI | CCWGG | 5 cut(s) | 414, 490, 646, 1018, 1159 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 289, 311, 321, 343 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2005, 2037 |
| Alw21I | GWGCWC | 2 cut(s) | 3116, 3493 |
| Alw26I | GTCTC | 9 cut(s) | 165, 379, 543, 1090, 1275, 1450, 1664, 1927, 3390 |
| AlwI | GGATC | 7 cut(s) | 229, 1226, 1575, 2015, 2028, 2300, 2975 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1235, 2573, 2984 |
| Ama87I | CYCGRG | 2 cut(s) | 2365, 3327 |
| Aor51HI | AGCGCT | 1 cut(s) | 1746 |
| AoxI | GGCC | 8 cut(s) | 228, 595, 797, 1889, 2119, 2212, 2638, 3567 |
| ApoI | RAATTY | 9 cut(s) | 59, 440, 523, 790, 1421, 1546, 2260, 2892, 3010 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 843 |
| AspLEI | GCGC | 4 cut(s) | 1097, 1747, 2131, 3531 |
| AspS9I | GGNCC | 5 cut(s) | 797, 1288, 2120, 3253, 3568 |
| AsuC2I | CCSGG | 3 cut(s) | 251, 2366, 2367 |
| AsuHPI | GGTGA | 3 cut(s) | 1430, 2593, 3008 |
| AsuNHI | GCTAGC | 1 cut(s) | 2032 |
| AvaI | CYCGRG | 2 cut(s) | 2365, 3327 |
| AvaII | GGWCC | 2 cut(s) | 1288, 3253 |
| BalI | TGGCCA | 2 cut(s) | 597, 2640 |
| BamHI | GGATCC | 1 cut(s) | 2020 |
| BanII | GRGCYC | 1 cut(s) | 3116 |
| BauI | CACGAG | 2 cut(s) | 2027, 2544 |
| BbsI | GAAGAC | 1 cut(s) | 2615 |
| Bbv12I | GWGCWC | 2 cut(s) | 3116, 3493 |
| BbvCI | CCTCAGC | 1 cut(s) | 2677 |
| BccI | CCATC | 9 cut(s) | 392, 419, 722, 884, 2360, 2435, 2483, 3299, 3586 |
| BceAI | ACGGC | 1 cut(s) | 1192 |
| BciT130I | CCWGG | 5 cut(s) | 416, 492, 648, 1020, 1161 |
| BciVI | GTATCC | 2 cut(s) | 418, 2665 |
| BclI | TGATCA | 2 cut(s) | 1711, 1822 |
| BcnI | CCSGG | 3 cut(s) | 251, 2366, 2367 |
| BcoDI | GTCTC | 9 cut(s) | 165, 379, 543, 1090, 1275, 1450, 1664, 1927, 3390 |
| BcuI | ACTAGT | 1 cut(s) | 1922 |
| BfaI | CTAG | 9 cut(s) | 1326, 1923, 2033, 2156, 2316, 2531, 2651, 3047, 3399 |
| BfmI | CTRYAG | 5 cut(s) | 1027, 1189, 1482, 2278, 3465 |
| BfoI | RGCGCY | 1 cut(s) | 1748 |
| BfrI | CTTAAG | 2 cut(s) | 2297, 3272 |
| BfuAI | ACCTGC | 1 cut(s) | 3172 |
| BfuI | GTATCC | 2 cut(s) | 418, 2665 |
| BlpI | GCTNAGC | 1 cut(s) | 2223 |
| Bme1390I | CCNGG | 8 cut(s) | 251, 416, 492, 648, 1020, 1161, 2366, 2367 |
| Bme18I | GGWCC | 2 cut(s) | 1288, 3253 |
| BmeT110I | CYCGRG | 2 cut(s) | 2365, 3327 |
| BmgT120I | GGNCC | 5 cut(s) | 797, 1288, 2120, 3253, 3568 |
| BmiI | GGNNCC | 7 cut(s) | 67, 271, 514, 645, 1682, 2022, 3458 |
| BmrFI | CCNGG | 8 cut(s) | 251, 416, 492, 648, 1020, 1161, 2366, 2367 |
| BmtI | GCTAGC | 1 cut(s) | 2036 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1115 |
| BpiI | GAAGAC | 1 cut(s) | 2615 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2525, 2557 |
| BpmI | CTGGAG | 3 cut(s) | 3156, 3231, 3557 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2677 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2223 |
| BpuEI | CTTGAG | 2 cut(s) | 935, 1815 |
| BpuMI | CCSGG | 3 cut(s) | 251, 2366, 2367 |
| BsaBI | GATNNNNATC | 3 cut(s) | 894, 2853, 3105 |
| BsaI | GGTCTC | 2 cut(s) | 379, 1450 |
| BsaJI | CCNNGG | 7 cut(s) | 1019, 1073, 1159, 1999, 2365, 2366, 2502 |
| BsaWI | WCCGGW | 1 cut(s) | 163 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 563, 593 |
| Bse1I | ACTGG | 7 cut(s) | 238, 558, 1460, 2658, 2751, 2925, 3515 |
| Bse3DI | GCAATG | 2 cut(s) | 373, 2773 |
| Bse8I | GATNNNNATC | 3 cut(s) | 894, 2853, 3105 |
| BseBI | CCWGG | 5 cut(s) | 416, 492, 648, 1020, 1161 |
| BseDI | CCNNGG | 7 cut(s) | 1019, 1073, 1159, 1999, 2365, 2366, 2502 |
| BseJI | GATNNNNATC | 3 cut(s) | 894, 2853, 3105 |
| BseMI | GCAATG | 2 cut(s) | 373, 2773 |
| BseNI | ACTGG | 7 cut(s) | 238, 558, 1460, 2658, 2751, 2925, 3515 |
| BseRI | GAGGAG | 2 cut(s) | 571, 2500 |
| BsgI | GTGCAG | 1 cut(s) | 1472 |
| Bsh1236I | CGCG | 3 cut(s) | 2129, 2847, 3086 |
| BshFI | GGCC | 8 cut(s) | 230, 597, 799, 1891, 2121, 2214, 2640, 3569 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3116, 3493 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2365, 3327 |
| BsiSI | CCGG | 4 cut(s) | 164, 250, 1899, 2366 |
| BslFI | GGGAC | 6 cut(s) | 345, 441, 1645, 1731, 1902, 3066 |
| BsmAI | GTCTC | 9 cut(s) | 165, 379, 543, 1090, 1275, 1450, 1664, 1927, 3390 |
| BsmBI | CGTCTC | 1 cut(s) | 1275 |
| BsmFI | GGGAC | 6 cut(s) | 345, 441, 1645, 1731, 1902, 3066 |
| BsmI | GAATGC | 2 cut(s) | 1698, 3605 |
| BsnI | GGCC | 8 cut(s) | 230, 597, 799, 1891, 2121, 2214, 2640, 3569 |
| Bso31I | GGTCTC | 2 cut(s) | 379, 1450 |
| BsoBI | CYCGRG | 2 cut(s) | 2365, 3327 |
| Bsp1286I | GDGCHC | 2 cut(s) | 3116, 3493 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2223 |
| Bsp19I | CCATGG | 1 cut(s) | 1073 |
| Bsp68I | TCGCGA | 1 cut(s) | 2847 |
| BspACI | CCGC | 3 cut(s) | 35, 1677, 3084 |
| BspANI | GGCC | 8 cut(s) | 230, 597, 799, 1891, 2121, 2214, 2640, 3569 |
| BspFNI | CGCG | 3 cut(s) | 2129, 2847, 3086 |
| BspLI | GGNNCC | 7 cut(s) | 67, 271, 514, 645, 1682, 2022, 3458 |
| BspMI | ACCTGC | 1 cut(s) | 3172 |
| BspOI | GCTAGC | 1 cut(s) | 2036 |
| BspPI | GGATC | 7 cut(s) | 229, 1226, 1575, 2015, 2028, 2300, 2975 |
| BspTI | CTTAAG | 2 cut(s) | 2297, 3272 |
| BspTNI | GGTCTC | 2 cut(s) | 379, 1450 |
| BsrDI | GCAATG | 2 cut(s) | 373, 2773 |
| BsrI | ACTGG | 7 cut(s) | 238, 558, 1460, 2658, 2751, 2925, 3515 |
| BssECI | CCNNGG | 7 cut(s) | 1019, 1073, 1159, 1999, 2365, 2366, 2502 |
| BssNAI | GTATAC | 1 cut(s) | 1996 |
| BssSI | CACGAG | 2 cut(s) | 2027, 2544 |
| BssT1I | CCWWGG | 2 cut(s) | 1073, 2502 |
| Bst1107I | GTATAC | 1 cut(s) | 1996 |
| Bst2BI | CACGAG | 2 cut(s) | 2027, 2544 |
| Bst2UI | CCWGG | 5 cut(s) | 416, 492, 648, 1020, 1161 |
| Bst6I | CTCTTC | 3 cut(s) | 2652, 3173, 3578 |
| BstAFI | CTTAAG | 2 cut(s) | 2297, 3272 |
| BstC8I | GCNNGC | 6 cut(s) | 33, 736, 987, 1893, 2034, 2391 |
| BstDSI | CCRYGG | 2 cut(s) | 1073, 1999 |
| BstFNI | CGCG | 3 cut(s) | 2129, 2847, 3086 |
| BstH2I | RGCGCY | 1 cut(s) | 1748 |
| BstHHI | GCGC | 4 cut(s) | 1097, 1747, 2131, 3531 |
| BstMAI | GTCTC | 9 cut(s) | 165, 379, 543, 1090, 1275, 1450, 1664, 1927, 3390 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 919, 2201, 2747, 2941, 3173, 3332 |
| BstNI | CCWGG | 5 cut(s) | 416, 492, 648, 1020, 1161 |
| BstNSI | RCATGY | 4 cut(s) | 490, 761, 1314, 2208 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1115 |
| BstSCI | CCNGG | 8 cut(s) | 249, 414, 490, 646, 1018, 1159, 2364, 2365 |
| BstSFI | CTRYAG | 5 cut(s) | 1027, 1189, 1482, 2278, 3465 |
| BstUI | CGCG | 3 cut(s) | 2129, 2847, 3086 |
| BstV2I | GAAGAC | 1 cut(s) | 2615 |
| BstX2I | RGATCY | 5 cut(s) | 221, 1231, 1567, 2020, 2980 |
| BstYI | RGATCY | 5 cut(s) | 221, 1231, 1567, 2020, 2980 |
| BstZ17I | GTATAC | 1 cut(s) | 1996 |
| BsuI | GTATCC | 2 cut(s) | 418, 2665 |
| BsuRI | GGCC | 8 cut(s) | 230, 597, 799, 1891, 2121, 2214, 2640, 3569 |
| BtgI | CCRYGG | 2 cut(s) | 1073, 1999 |
| BtgZI | GCGATG | 1 cut(s) | 2714 |
| BtsI | GCAGTG | 3 cut(s) | 817, 1067, 1623 |
| BtuMI | TCGCGA | 1 cut(s) | 2847 |
| BveI | ACCTGC | 1 cut(s) | 3172 |
| Cac8I | GCNNGC | 6 cut(s) | 33, 736, 987, 1893, 2034, 2391 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1235, 2573, 2984 |
| CfoI | GCGC | 4 cut(s) | 1097, 1747, 2131, 3531 |
| Cfr13I | GGNCC | 5 cut(s) | 797, 1288, 2120, 3253, 3568 |
| Cfr9I | CCCGGG | 1 cut(s) | 2365 |
| CseI | GACGC | 1 cut(s) | 2609 |
| Csp6I | GTAC | 3 cut(s) | 2970, 3320, 3341 |
| CviQI | GTAC | 3 cut(s) | 2970, 3320, 3341 |
| DraIII | CACNNNGTG | 2 cut(s) | 281, 2801 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1762, 3078 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1762, 3078 |
| EaeI | YGGCCR | 2 cut(s) | 595, 2638 |
| Eam1104I | CTCTTC | 3 cut(s) | 2652, 3173, 3578 |
| EarI | CTCTTC | 3 cut(s) | 2652, 3173, 3578 |
| Ecl136II | GAGCTC | 1 cut(s) | 3114 |
| Eco130I | CCWWGG | 2 cut(s) | 1073, 2502 |
| Eco147I | AGGCCT | 1 cut(s) | 2214 |
| Eco24I | GRGCYC | 1 cut(s) | 3116 |
| Eco31I | GGTCTC | 2 cut(s) | 379, 1450 |
| Eco32I | GATATC | 1 cut(s) | 3052 |
| Eco47I | GGWCC | 2 cut(s) | 1288, 3253 |
| Eco47III | AGCGCT | 1 cut(s) | 1746 |
| Eco53kI | GAGCTC | 1 cut(s) | 3114 |
| Eco57I | CTGAAG | 6 cut(s) | 765, 834, 1455, 1608, 2272, 2961 |
| Eco88I | CYCGRG | 2 cut(s) | 2365, 3327 |
| EcoICRI | GAGCTC | 1 cut(s) | 3114 |
| EcoRI | GAATTC | 2 cut(s) | 790, 2260 |
| EcoRII | CCWGG | 5 cut(s) | 414, 490, 646, 1018, 1159 |
| EcoRV | GATATC | 1 cut(s) | 3052 |
| EcoT14I | CCWWGG | 2 cut(s) | 1073, 2502 |
| EcoT38I | GRGCYC | 1 cut(s) | 3116 |
| ErhI | CCWWGG | 2 cut(s) | 1073, 2502 |
| Esp3I | CGTCTC | 1 cut(s) | 1275 |
| FaqI | GGGAC | 6 cut(s) | 345, 441, 1645, 1731, 1902, 3066 |
| FauI | CCCGC | 2 cut(s) | 1670, 3091 |
| FauNDI | CATATG | 4 cut(s) | 592, 966, 2088, 2704 |
| FbaI | TGATCA | 2 cut(s) | 1711, 1822 |
| FblI | GTMKAC | 2 cut(s) | 1766, 1995 |
| FriOI | GRGCYC | 1 cut(s) | 3116 |
| FspBI | CTAG | 9 cut(s) | 1326, 1923, 2033, 2156, 2316, 2531, 2651, 3047, 3399 |
| FspI | TGCGCA | 1 cut(s) | 1096 |
| GlaI | GCGC | 4 cut(s) | 1096, 1746, 2130, 3530 |
| GsuI | CTGGAG | 3 cut(s) | 3156, 3231, 3557 |
| HaeII | RGCGCY | 1 cut(s) | 1748 |
| HaeIII | GGCC | 8 cut(s) | 230, 597, 799, 1891, 2121, 2214, 2640, 3569 |
| HapII | CCGG | 4 cut(s) | 164, 250, 1899, 2366 |
| HgaI | GACGC | 1 cut(s) | 2609 |
| HhaI | GCGC | 4 cut(s) | 1097, 1747, 2131, 3531 |
| Hin6I | GCGC | 4 cut(s) | 1095, 1745, 2129, 3529 |
| HinP1I | GCGC | 4 cut(s) | 1095, 1745, 2129, 3529 |
| HindIII | AAGCTT | 4 cut(s) | 2193, 2631, 2696, 2739 |
| HpaII | CCGG | 4 cut(s) | 164, 250, 1899, 2366 |
| HphI | GGTGA | 3 cut(s) | 1430, 2593, 3008 |
| Hpy166II | GTNNAC | 8 cut(s) | 571, 1006, 1767, 1996, 2099, 2494, 3161, 3231 |
| Hpy8I | GTNNAC | 8 cut(s) | 571, 1006, 1767, 1996, 2099, 2494, 3161, 3231 |
| Hpy99I | CGWCG | 2 cut(s) | 74, 77 |
| HpyAV | CCTTC | 8 cut(s) | 4, 858, 964, 1881, 1954, 2225, 2366, 3291 |
| HpyCH4IV | ACGT | 5 cut(s) | 1224, 2327, 2384, 2512, 2808 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 919, 2201, 2747, 2941, 3173, 3332 |
| HpySE526I | ACGT | 5 cut(s) | 1224, 2327, 2384, 2512, 2808 |
| HspAI | GCGC | 4 cut(s) | 1095, 1745, 2129, 3529 |
| Ksp22I | TGATCA | 2 cut(s) | 1711, 1822 |
| LmnI | GCTCC | 6 cut(s) | 65, 269, 512, 910, 1182, 3119 |
| MaeI | CTAG | 9 cut(s) | 1326, 1923, 2033, 2156, 2316, 2531, 2651, 3047, 3399 |
| MaeII | ACGT | 5 cut(s) | 1224, 2327, 2384, 2512, 2808 |
| MaeIII | GTNAC | 5 cut(s) | 650, 1225, 1963, 2546, 2804 |
| MfeI | CAATTG | 2 cut(s) | 2265, 3480 |
| MflI | RGATCY | 5 cut(s) | 221, 1231, 1567, 2020, 2980 |
| MhlI | GDGCHC | 2 cut(s) | 3116, 3493 |
| MlsI | TGGCCA | 2 cut(s) | 597, 2640 |
| MluNI | TGGCCA | 2 cut(s) | 597, 2640 |
| MlyI | GAGTC | 6 cut(s) | 194, 494, 1268, 1535, 2534, 3088 |
| MmeI | TCCRAC | 4 cut(s) | 705, 972, 1036, 2863 |
| Mox20I | TGGCCA | 2 cut(s) | 597, 2640 |
| MroXI | GAANNNNTTC | 1 cut(s) | 843 |
| MscI | TGGCCA | 2 cut(s) | 597, 2640 |
| MslI | CAYNNNNRTG | 4 cut(s) | 209, 464, 1072, 1651 |
| Msp20I | TGGCCA | 2 cut(s) | 597, 2640 |
| MspA1I | CMGCKG | 2 cut(s) | 1895, 2681 |
| MspCI | CTTAAG | 2 cut(s) | 2297, 3272 |
| MspI | CCGG | 4 cut(s) | 164, 250, 1899, 2366 |
| MspR9I | CCNGG | 8 cut(s) | 251, 416, 492, 648, 1020, 1161, 2366, 2367 |
| MunI | CAATTG | 2 cut(s) | 2265, 3480 |
| Mva1269I | GAATGC | 2 cut(s) | 1698, 3605 |
| MvaI | CCWGG | 5 cut(s) | 416, 492, 648, 1020, 1161 |
| MvnI | CGCG | 3 cut(s) | 2129, 2847, 3086 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 919, 2201, 2747, 2941, 3173, 3332 |
| NciI | CCSGG | 3 cut(s) | 251, 2366, 2367 |
| NcoI | CCATGG | 1 cut(s) | 1073 |
| NdeI | CATATG | 4 cut(s) | 592, 966, 2088, 2704 |
| NheI | GCTAGC | 1 cut(s) | 2032 |
| NlaIV | GGNNCC | 7 cut(s) | 67, 271, 514, 645, 1682, 2022, 3458 |
| NmuCI | GTSAC | 2 cut(s) | 2546, 2804 |
| NruI | TCGCGA | 1 cut(s) | 2847 |
| NsbI | TGCGCA | 1 cut(s) | 1096 |
| NspI | RCATGY | 4 cut(s) | 490, 761, 1314, 2208 |
| PaeR7I | CTCGAG | 1 cut(s) | 3327 |
| PceI | AGGCCT | 1 cut(s) | 2214 |
| PciI | ACATGT | 1 cut(s) | 757 |
| PctI | GAATGC | 2 cut(s) | 1698, 3605 |
| PdmI | GAANNNNTTC | 1 cut(s) | 843 |
| PflFI | GACNNNGTC | 1 cut(s) | 1607 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 237, 607, 1079 |
| PfoI | TCCNGGA | 1 cut(s) | 414 |
| PleI | GAGTC | 6 cut(s) | 193, 494, 1267, 1534, 2534, 3087 |
| PpsI | GAGTC | 6 cut(s) | 193, 494, 1267, 1534, 2534, 3087 |
| PscI | ACATGT | 1 cut(s) | 757 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1115 |
| Psp124BI | GAGCTC | 1 cut(s) | 3116 |
| Psp1406I | AACGTT | 2 cut(s) | 2327, 2384 |
| Psp6I | CCWGG | 5 cut(s) | 414, 490, 646, 1018, 1159 |
| PspGI | CCWGG | 5 cut(s) | 414, 490, 646, 1018, 1159 |
| PspN4I | GGNNCC | 7 cut(s) | 67, 271, 514, 645, 1682, 2022, 3458 |
| PspPI | GGNCC | 5 cut(s) | 797, 1288, 2120, 3253, 3568 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 989, 1021, 2413, 2445 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1235, 2573, 2984 |
| PsuI | RGATCY | 5 cut(s) | 221, 1231, 1567, 2020, 2980 |
| PsyI | GACNNNGTC | 1 cut(s) | 1607 |
| PvuII | CAGCTG | 2 cut(s) | 1895, 2681 |
| RruI | TCGCGA | 1 cut(s) | 2847 |
| RsaI | GTAC | 3 cut(s) | 2971, 3321, 3342 |
| RsaNI | GTAC | 3 cut(s) | 2970, 3320, 3341 |
| RseI | CAYNNNNRTG | 4 cut(s) | 209, 464, 1072, 1651 |
| SacI | GAGCTC | 1 cut(s) | 3116 |
| Sau96I | GGNCC | 5 cut(s) | 797, 1288, 2120, 3253, 3568 |
| SchI | GAGTC | 6 cut(s) | 194, 494, 1268, 1535, 2534, 3088 |
| ScrFI | CCNGG | 8 cut(s) | 251, 416, 492, 648, 1020, 1161, 2366, 2367 |
| SduI | GDGCHC | 2 cut(s) | 3116, 3493 |
| SfcI | CTRYAG | 5 cut(s) | 1027, 1189, 1482, 2278, 3465 |
| Sfr274I | CTCGAG | 1 cut(s) | 3327 |
| SinI | GGWCC | 2 cut(s) | 1288, 3253 |
| SlaI | CTCGAG | 1 cut(s) | 3327 |
| SmaI | CCCGGG | 1 cut(s) | 2367 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 209, 464, 1072, 1651 |
| SmlI | CTYRAG | 5 cut(s) | 914, 1830, 2297, 3272, 3327 |
| SmoI | CTYRAG | 5 cut(s) | 914, 1830, 2297, 3272, 3327 |
| SpeI | ACTAGT | 1 cut(s) | 1922 |
| SseBI | AGGCCT | 1 cut(s) | 2214 |
| SsiI | CCGC | 3 cut(s) | 35, 1677, 3084 |
| SspI | AATATT | 1 cut(s) | 2602 |
| SspMI | CTAG | 9 cut(s) | 1326, 1923, 2033, 2156, 2316, 2531, 2651, 3047, 3399 |
| SstI | GAGCTC | 1 cut(s) | 3116 |
| StuI | AGGCCT | 1 cut(s) | 2214 |
| StyD4I | CCNGG | 8 cut(s) | 249, 414, 490, 646, 1018, 1159, 2364, 2365 |
| StyI | CCWWGG | 2 cut(s) | 1073, 2502 |
| TaiI | ACGT | 5 cut(s) | 1227, 2330, 2387, 2515, 2811 |
| TaqI | TCGA | 6 cut(s) | 768, 1860, 2439, 2478, 3328, 3631 |
| TatI | WGTACW | 1 cut(s) | 3340 |
| TseFI | GTSAC | 2 cut(s) | 2546, 2804 |
| Tsp45I | GTSAC | 2 cut(s) | 2546, 2804 |
| TspGWI | ACGGA | 1 cut(s) | 789 |
| TspMI | CCCGGG | 1 cut(s) | 2365 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1607 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 237, 607, 1079 |
| Vha464I | CTTAAG | 2 cut(s) | 2297, 3272 |
| VpaK11BI | GGWCC | 2 cut(s) | 1288, 3253 |
| XapI | RAATTY | 9 cut(s) | 59, 440, 523, 790, 1421, 1546, 2260, 2892, 3010 |
| XbaI | TCTAGA | 2 cut(s) | 2155, 3046 |
| XceI | RCATGY | 4 cut(s) | 490, 761, 1314, 2208 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 565, 2917 |
| XhoI | CTCGAG | 1 cut(s) | 3327 |
| XmaI | CCCGGG | 1 cut(s) | 2365 |
| XmiI | GTMKAC | 2 cut(s) | 1766, 1995 |
| XmnI | GAANNNNTTC | 1 cut(s) | 843 |
| XspI | CTAG | 9 cut(s) | 1326, 1923, 2033, 2156, 2316, 2531, 2651, 3047, 3399 |