Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004421

Physical Location & Seq

Genomic Coordinates Reverse (-)

30041384 .. 30047320

Gene Structure 5937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g29650.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3210 bp

ATGTTGAAGGCGGAGGACTGCTCGAATTGGAACGAGTTACCGGCCGCCGATGGATTTGCAGGAGAAGAATTCGACGACGACGGCGACGAGATGTGCATAGATGTCGACACGCTCTATCGCCTTCTCGATGAAGAACCCACGCAGAGTTGTCCAGAGAATTTGTCATTGGAAAATCGATTGGATGCTGAAGCTGTTTCCGATGCTCAGCTCCTAAGCGGATCTCAAGCAGTAAAAGAAGAACCGCCTATAGAAACCAATTTAATGGGTCCAGGCTCATGGAATCCCCCATACAGATTGGAAGCTTCTCATTCTGGGGCAGGGGGTCAAGATGGCTCTTTTGATTATGAAGGGAACCATGACATGAATTTTGATTACAAAGAAATGCAACCATCATCACACACTGGTTCTCCCGGGCATACGTACTCTGCAAGTCTTAAAGACTGGATTTCCTTGAATCCAGCCAACGAGACTTGCTTTACAGAGAGGGTTGCAGTTTCACAGCCATGTAGCACGGCATCTAGTTTTTCTGAAGGCCATGTTAATCACATTTTGGACCACAGAGATCTGAATGTCCTGCAGGGGGAAGTTGATGTGCCAGGGAAAGCTGAATCTGAATATGCTTCACAATGCCTTGGTATTGAGAACATGGACTTAAATTCCAGAACCTATTTCAATTTGGGGCAAAATACCACGGAAACCATAGGGCTATCTGAAAATAATTCCTGCACTTCTATGGAAATTTCCTCTACCCTCTGTCAAAATTCTAATGTTTTCAGCGACCCTTATACAGCTATGTGTGGCAGGAGCTTAGATAATCCATATTTCACTGATGCCTTAATGGATCATAGTCCGACTAGGTATTATTTTCCGAGTAATGAAGAAATGATGGCTAATGTGAAGGATGAATCAGGGGAGTTTCCAACTGATAGTTCATGCTCAACTACCAAGATGAATTTAAATGGCCAGGAGGGGATAACCGGTAAATCTTCTTTTGAGCCTTCAATGATTGATGTTTTAAATGGGAACCAGTGGAATTTTGGATATGGTAATTGTATGTCAGCAATCAGTGGAAATTCTTCTTTCGATGCTGACTCTTTTCCTGCTGACAACAAAGCATCAGTTGAGCCTTTGTGTTCGACCTATACATACATGTCAAGCAAAAAGGAAACGAATGGTTTGAAAAGTGAAAAGATTGATGAGTTTGTTGCACCAAGTAGCGTTATGCGTCAATCTTTTCGAGGCATGGATGAAGCTGTCAGTAGACAGTCTTATAGTGCTGATGATCACTTTTTTGACAAAGACTCAAAGCAGTCTGGTTTTGGTTTATCAACTCAGAATCTTGGTAACTCAGTGGATGATGATGAAGTCATGATTGCTGCATGTAAGAGAGCTTGTCACTCTCAAGATTTTAGGAATGGAAGTTCCACATCCCCTGTTGATGGTCAATCTGTGAATTCAAATGCCTATTTTCCAGGTGCTCAGCCATTCACTTCATTTGAGAATCAGGGTTACATGAAGGACAAAGTAACTCATTCTAAGAGCATGCTTTTTTCGAAAGTCAGCCCTGAATCAATTCATAGTAACTTCTCTGACAAATCCCCTGCAGAGGATGACGTTGATGTATGTATTATTGAAGATAACAGTCATCCTGCACCCTCAAATCGCTCTTCAGTGGTTAGCAATACTAGTTACGCTGCGCCCGTGTATCAGTCTCCAGCACTTGGAAATACTGTTGTTAATTCTCAACAATTGACGCCGAGTGGTCATTACTCAGGAGTGGGAGGCATGAGATTCAAGACACGAGATGAACAATTGATTTTGAGAGCAGCATTGCAGGACCTTTCACAGCCCAAGTCAGAAGCTATTCCACCGGATGGACTTTTAGCAGTTCCTCTGTTACGGCACCAGAGAATTGCATTGTCATGGATGGTTCAGAAAGAGACAGCAAGTTTGCACTGTTCTGGAGGAATTCTTGCCGATCGATCAGGTCTATATGATTCAGGATTGGGAAAGACAATATCGACAATTGCACTTATACTTAAGGAAAGGCCTTCATCTGGAGCTTGTCAAGATGTAAAAGTGCACAAGCTGGAAACTCTGGATTTGGACAATGATGATGATATGCCTTTTGAGATTGGTGGAAAGAAGCAACATGCTGATGCCCATGAAGTTAGTTCAAATGGAACTCCAAACGAGAGCATAAAACCTTTGATACAAGCAAAGGGAAGGCCAGCTGCTGGAACACTTGTTGTTTGTCCCACGAGTGTCCTCCGGCAATGGGCTGAGGAGCTTCAGAACAAAGTAACTGAAAAAGCTAATCTCTCGGTGCTAGTTTACCATGGATGTAACCGGACAAGGGATCCTTTGGAGCTGGCTAAGCATGATGTTGTTCTCACAACATATTCAATTGTCAGCATGGAGGTTCCTAAGCAGCCTCTTGTTGATGATGATGATGAGGAGAAAGGAAAGCGAGATGAGTACGATGGTCCACATTACAGTAAGAAAAGAAAATACCCCCAAAATTCTGCAAATAAAGGCTCAAAAGGTAAAAAAGGATTAGAGAGTGCTGTGCTCGATTCTGTTGCTCGCCCTCTTGCTAAGGTTGCATGGTTTAGGGTTGTCCTGGATGAGGCTCAGAGTATTAAGAATCACAGAACTCAAGTAGCTAGGGCCTGTTGGGGTCTTCGCGCGAAACGTAGGTGGTGCTTATCAGGGACTCCTATCCAGAATGCAATTGATGACCTTTATAGCTACTTCAGATTTCTAAAATATGACCCTTATGCTGTATACAAGTCATTTTGCTCTACAATTAAGGTCCCAATCAATAGGAATCCAACAAAAGGGTACAGAAAACTTCAAGCTGTTCTGAAGACAATTATGTTACGCCGCACTAAAGGCACACTTCTTGACGGAGAACCTATTATTACTTTACCACCTAAATCTATAGAATTGAAAAGGGTGGAGTTTTCCAAGGAAGAACGGGATTTCTACTCGAGGCTAGAAGCTGATTCACGTGCTCAGTTTGAAGAATATGCAGCAGCTGGAACTGTTAAACAAAATTATGTTAACATTTTGTTGATGCTTTTGCGTCTTCGACAAGCTTGTGATCGTCCTATTCTTGTTAGACGGTATGATTCAAATTCTTTATTGATCGATCTTCAGTTGAGAAGGCAAAGAAACTTCCTCGTGATAAACAACAATCCCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044764 GO:0045003 GO:0046483 GO:0050896 GO:0051704 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2

Protein Analysis

1070

Amino Acids

118.35

Weight (kDa)

5.18

Isoelectric Point (pI)

52.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G61140 AT1G61140 AT1G61140
fragaria_vesca	FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580
malus_domestica	MD05G1322200.v1.1 MD10G1300200.v1.1
prunus_persica	Prupe.4G040600_v2.0.a1 Prupe.4G040600_v2.0.a1
pyrus_communis	pycom05g29650 pycom10g25290
rosa_chinensis	RchiOBHm_Chr5g0007521
rosa_laevigata	RLG00000031464
rosa_multiflora	Rmu_co8522595.1_g000001 Rmu_ssc0000182.1_g000011
rosa_roxburghii	Rroxscaffold_1G00068890
rosa_rugosa	Rorug04G0427800 Rorug04G0427900 Rorug04G0428000
rosa_samantha	Rh5AG055800 Rh5BG053400 Rh5CG063200 Rh5DG052400
rosa_wichuraiana	Rw5G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1902
AccB7I	CCANNNNNTGG	3 cut(s)	1721, 1874, 2237
AccI	GTMKAC	3 cut(s)	105, 1261, 2787
AccII	CGCG	2 cut(s)	2688, 2690
AciI	CCGC	5 cut(s)	11, 45, 216, 242, 2887
AclWI	GGATC	4 cut(s)	226, 849, 2354, 2367
AcoI	YGGCCR	2 cut(s)	42, 961
AcuI	CTGAAG	7 cut(s)	207, 549, 1653, 2276, 2740, 2888, 3143
AcvI	CACGTG	1 cut(s)	3014
AcyI	GRCGYC	1 cut(s)	1754
AfaI	GTAC	3 cut(s)	422, 2480, 2846
AflII	CTTAAG	1 cut(s)	2039
AflIII	ACRYGT	1 cut(s)	1149
AgeI	ACCGGT	1 cut(s)	977
AhlI	ACTAGT	1 cut(s)	1685
AjnI	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
AjuI	GAANNNNNNNTTGG	4 cut(s)	149, 181, 913, 945
AloI	GAACNNNNNNTCC	2 cut(s)	1405, 1437
Alw21I	GWGCWC	4 cut(s)	1480, 2085, 2574, 3019
Alw26I	GTCTC	3 cut(s)	461, 1716, 1934
Alw44I	GTGCAC	1 cut(s)	2081
AlwI	GGATC	4 cut(s)	226, 849, 2354, 2367
AlwNI	CAGNNNCTG	2 cut(s)	2237, 3041
Ama87I	CYCGRG	2 cut(s)	410, 2992
AoxI	GGCC	6 cut(s)	42, 532, 961, 2048, 2228, 2670
ApaLI	GTGCAC	1 cut(s)	2081
ApeKI	GCWGC	7 cut(s)	1376, 1694, 1826, 2234, 2431, 3035, 3038
ArsI	GACNNNNNNTTYG	4 cut(s)	350, 382, 1933, 1965
AsiGI	ACCGGT	1 cut(s)	977
Asp700I	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
AspLEI	GCGC	2 cut(s)	1699, 2690
AspS9I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
AsuC2I	CCSGG	2 cut(s)	411, 412
AsuII	TTCGAA	1 cut(s)	1553
AvaI	CYCGRG	2 cut(s)	410, 2992
AvaII	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
BaeGI	GKGCMC	1 cut(s)	2085
BalI	TGGCCA	1 cut(s)	963
BamHI	GGATCC	1 cut(s)	2359
BanI	GGYRCC	1 cut(s)	1902
BauI	CACGAG	3 cut(s)	1800, 2260, 3185
BbrPI	CACGTG	1 cut(s)	3014
BbsI	GAAGAC	3 cut(s)	2675, 2876, 3083
Bbv12I	GWGCWC	4 cut(s)	1480, 2085, 2574, 3019
BbvCI	CCTCAGC	1 cut(s)	2283
BbvI	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
BccI	CCATC	8 cut(s)	44, 323, 397, 880, 1433, 1868, 1921, 2477
BceAI	ACGGC	3 cut(s)	97, 528, 1916
BcgI	CGANNNNNNTGC	6 cut(s)	38, 72, 85, 119, 2564, 2598
BciT130I	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
BclI	TGATCA	1 cut(s)	1282
BcnI	CCSGG	2 cut(s)	411, 412
BcoDI	GTCTC	3 cut(s)	461, 1716, 1934
BcuI	ACTAGT	1 cut(s)	1685
BfaI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
BfmI	CTRYAG	4 cut(s)	246, 575, 1602, 2943
BfrI	CTTAAG	1 cut(s)	2039
BglII	AGATCT	1 cut(s)	562
BisI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
BlpI	GCTNAGC	3 cut(s)	204, 1479, 2376
BlsI	GCNGC	9 cut(s)	46, 1378, 1696, 1828, 2236, 2433, 2888, 3037, 3040
Bme1390I	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
Bme18I	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
BmeT110I	CYCGRG	2 cut(s)	410, 2992
BmgT120I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
BmiI	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
BmrFI	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
BmsI	GCATC	8 cut(s)	172, 190, 524, 820, 1075, 1124, 2149, 3069
BpiI	GAAGAC	3 cut(s)	2675, 2876, 3083
BplI	GAGNNNNNCTC	1 cut(s)	37
BpmI	CTGGAG	3 cut(s)	1698, 1983, 2079
Bpu10I	CCTNAGC	4 cut(s)	212, 2283, 2427, 2598
Bpu1102I	GCTNAGC	3 cut(s)	204, 1479, 2376
Bpu14I	TTCGAA	1 cut(s)	1553
BpuEI	CTTGAG	3 cut(s)	207, 1386, 2643
BpuMI	CCSGG	2 cut(s)	411, 412
Bsa29I	ATCGAT	3 cut(s)	175, 1981, 3153
BsaAI	YACGTR	2 cut(s)	420, 3014
BsaHI	GRCGYC	1 cut(s)	1754
BsaJI	CCNNGG	6 cut(s)	410, 596, 631, 690, 2338, 2970
BsaWI	WCCGGW	3 cut(s)	977, 1870, 2349
BsaXI	ACNNNNNCTCC	2 cut(s)	391, 421
Bse118I	RCCGGY	2 cut(s)	40, 977
Bse1I	ACTGG	3 cut(s)	406, 446, 1027
Bse3DI	GCAATG	2 cut(s)	1829, 2282
BseBI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
BseCI	ATCGAT	3 cut(s)	175, 1981, 3153
BseDI	CCNNGG	6 cut(s)	410, 596, 631, 690, 2338, 2970
BseMI	GCAATG	2 cut(s)	1829, 2282
BseMII	CTCAG	8 cut(s)	218, 1346, 1362, 1493, 1785, 2274, 2648, 3032
BseNI	ACTGG	3 cut(s)	406, 446, 1027
BseRI	GAGGAG	2 cut(s)	2300, 2471
BseSI	GKGCMC	1 cut(s)	2085
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
BsgI	GTGCAG	2 cut(s)	709, 1635
Bsh1236I	CGCG	2 cut(s)	2688, 2690
Bsh1285I	CGRYCG	2 cut(s)	45, 1981
BshFI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BshNI	GGYRCC	1 cut(s)	1902
BshTI	ACCGGT	1 cut(s)	977
BshVI	ATCGAT	3 cut(s)	175, 1981, 3153
BsiEI	CGRYCG	2 cut(s)	45, 1981
BsiHKAI	GWGCWC	4 cut(s)	1480, 2085, 2574, 3019
BsiHKCI	CYCGRG	2 cut(s)	410, 2992
BsiSI	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
BslFI	GGGAC	3 cut(s)	2241, 2728, 2801
BsmAI	GTCTC	3 cut(s)	461, 1716, 1934
BsmFI	GGGAC	3 cut(s)	2241, 2728, 2801
BsmI	GAATGC	1 cut(s)	2734
BsnI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BsoBI	CYCGRG	2 cut(s)	410, 2992
Bsp119I	TTCGAA	1 cut(s)	1553
Bsp1286I	GDGCHC	4 cut(s)	1480, 2085, 2574, 3019
Bsp1720I	GCTNAGC	3 cut(s)	204, 1479, 2376
Bsp19I	CCATGG	1 cut(s)	2338
BspACI	CCGC	5 cut(s)	11, 45, 216, 242, 2887
BspANI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BspCNI	CTCAG	8 cut(s)	217, 1345, 1361, 1492, 1784, 2275, 2647, 3031
BspDI	ATCGAT	3 cut(s)	175, 1981, 3153
BspFNI	CGCG	2 cut(s)	2688, 2690
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
BspMAI	CTGCAG	2 cut(s)	579, 1606
BspPI	GGATC	4 cut(s)	226, 849, 2354, 2367
BspQI	GCTCTTC	1 cut(s)	1672
BspT104I	TTCGAA	1 cut(s)	1553
BspT107I	GGYRCC	1 cut(s)	1902
BspTI	CTTAAG	1 cut(s)	2039
BsrDI	GCAATG	2 cut(s)	1829, 2282
BsrFI	RCCGGY	2 cut(s)	40, 977
BsrI	ACTGG	3 cut(s)	406, 446, 1027
BssAI	RCCGGY	2 cut(s)	40, 977
BssECI	CCNNGG	6 cut(s)	410, 596, 631, 690, 2338, 2970
BssNAI	GTATAC	1 cut(s)	2788
BssNI	GRCGYC	1 cut(s)	1754
BssSI	CACGAG	3 cut(s)	1800, 2260, 3185
BssT1I	CCWWGG	3 cut(s)	631, 2338, 2970
Bst1107I	GTATAC	1 cut(s)	2788
Bst2BI	CACGAG	3 cut(s)	1800, 2260, 3185
Bst2UI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
Bst4CI	ACNGT	7 cut(s)	1266, 1643, 1732, 1958, 2498, 3049, 3129
Bst6I	CTCTTC	1 cut(s)	1672
BstACI	GRCGYC	1 cut(s)	1754
BstAFI	CTTAAG	1 cut(s)	2039
BstBAI	YACGTR	2 cut(s)	420, 3014
BstBI	TTCGAA	1 cut(s)	1553
BstC8I	GCNNGC	4 cut(s)	1544, 2232, 2373, 2587
BstDSI	CCRYGG	2 cut(s)	690, 2338
BstENI	CCTNNNNNAGG	1 cut(s)	2627
BstFNI	CGCG	2 cut(s)	2688, 2690
BstHHI	GCGC	2 cut(s)	1699, 2690
BstMAI	GTCTC	3 cut(s)	461, 1716, 1934
BstMCI	CGRYCG	2 cut(s)	45, 1981
BstMWI	GCNNNNNNNGC	3 cut(s)	2377, 2603, 2895
BstNI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
BstNSI	RCATGY	4 cut(s)	1153, 1383, 1546, 2156
BstSCI	CCNGG	7 cut(s)	268, 409, 410, 595, 963, 1471, 2622
BstSFI	CTRYAG	4 cut(s)	246, 575, 1602, 2943
BstSLI	GKGCMC	1 cut(s)	2085
BstSNI	TACGTA	1 cut(s)	420
BstUI	CGCG	2 cut(s)	2688, 2690
BstV1I	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
BstV2I	GAAGAC	3 cut(s)	2675, 2876, 3083
BstX2I	RGATCY	3 cut(s)	218, 562, 2359
BstXI	CCANNNNNNTGG	2 cut(s)	262, 276
BstYI	RGATCY	3 cut(s)	218, 562, 2359
BstZ17I	GTATAC	1 cut(s)	2788
BstZI	CGGCCG	1 cut(s)	42
Bsu15I	ATCGAT	3 cut(s)	175, 1981, 3153
BsuRI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BsuTUI	ATCGAT	3 cut(s)	175, 1981, 3153
BtgI	CCRYGG	2 cut(s)	690, 2338
BtsIMutI	CAGTG	7 cut(s)	399, 825, 1034, 1072, 1356, 1677, 1954
Cac8I	GCNNGC	4 cut(s)	1544, 2232, 2373, 2587
CaiI	CAGNNNCTG	2 cut(s)	2237, 3041
CciI	TCATGA	1 cut(s)	1368
CfoI	GCGC	2 cut(s)	1699, 2690
Cfr10I	RCCGGY	2 cut(s)	40, 977
Cfr13I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
Cfr9I	CCCGGG	1 cut(s)	410
ClaI	ATCGAT	3 cut(s)	175, 1981, 3153
CseI	GACGC	3 cut(s)	1214, 1762, 3077
Csp6I	GTAC	3 cut(s)	421, 2479, 2845
CspAI	ACCGGT	1 cut(s)	977
CviQI	GTAC	3 cut(s)	421, 2479, 2845
DraI	TTTAAA	2 cut(s)	957, 1017
EaeI	YGGCCR	2 cut(s)	42, 961
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	1 cut(s)	1672
EarI	CTCTTC	1 cut(s)	1672
EciI	GGCGGA	1 cut(s)	26
EclXI	CGGCCG	1 cut(s)	42
Eco105I	TACGTA	1 cut(s)	420
Eco130I	CCWWGG	3 cut(s)	631, 2338, 2970
Eco147I	AGGCCT	1 cut(s)	2050
Eco47I	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
Eco52I	CGGCCG	1 cut(s)	42
Eco57I	CTGAAG	7 cut(s)	207, 549, 1653, 2276, 2740, 2888, 3143
Eco72I	CACGTG	1 cut(s)	3014
Eco88I	CYCGRG	2 cut(s)	410, 2992
EcoNI	CCTNNNNNAGG	1 cut(s)	2627
EcoO109I	RGGNCCY	3 cut(s)	1837, 2670, 2815
EcoRI	GAATTC	3 cut(s)	68, 1453, 1968
EcoRII	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
EcoT14I	CCWWGG	3 cut(s)	631, 2338, 2970
ErhI	CCWWGG	3 cut(s)	631, 2338, 2970
FalI	AAGNNNNNCTT	4 cut(s)	2347, 2379, 2886, 2918
FaqI	GGGAC	3 cut(s)	2241, 2728, 2801
FbaI	TGATCA	1 cut(s)	1282
FblI	GTMKAC	3 cut(s)	105, 1261, 2787
Fnu4HI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
Fsp4HI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
FspBI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
GlaI	GCGC	2 cut(s)	1698, 2689
GluI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
GsuI	CTGGAG	3 cut(s)	1698, 1983, 2079
HaeIII	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
HapII	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
HgaI	GACGC	3 cut(s)	1214, 1762, 3077
HhaI	GCGC	2 cut(s)	1699, 2690
Hin1I	GRCGYC	1 cut(s)	1754
Hin6I	GCGC	2 cut(s)	1697, 2688
HinP1I	GCGC	2 cut(s)	1697, 2688
HincII	GTYRAC	2 cut(s)	106, 3067
HindII	GTYRAC	2 cut(s)	106, 3067
HindIII	AAGCTT	2 cut(s)	300, 3099
HpaI	GTTAAC	1 cut(s)	3067
HpaII	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
Hpy166II	GTNNAC	7 cut(s)	106, 1262, 2083, 2335, 2489, 2788, 3067
Hpy8I	GTNNAC	7 cut(s)	106, 1262, 2083, 2335, 2489, 2788, 3067
Hpy99I	CGWCG	4 cut(s)	77, 80, 83, 89
HpyAV	CCTTC	9 cut(s)	131, 341, 524, 892, 1008, 1510, 2061, 2220, 3162
HpyCH4III	ACNGT	7 cut(s)	1266, 1643, 1732, 1958, 2498, 3049, 3129
HpyCH4IV	ACGT	4 cut(s)	419, 1614, 2695, 3013
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2377, 2603, 2895
HpySE526I	ACGT	4 cut(s)	419, 1614, 2695, 3013
Hsp92I	GRCGYC	1 cut(s)	1754
HspAI	GCGC	2 cut(s)	1697, 2688
Ksp22I	TGATCA	1 cut(s)	1282
KspAI	GTTAAC	1 cut(s)	3067
LguI	GCTCTTC	1 cut(s)	1672
LmnI	GCTCC	5 cut(s)	213, 804, 2060, 2287, 2368
Lsp1109I	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
LweI	GCATC	8 cut(s)	172, 190, 524, 820, 1075, 1124, 2149, 3069
MaeI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
MaeII	ACGT	4 cut(s)	419, 1614, 2695, 3013
MfeI	CAATTG	5 cut(s)	1748, 1811, 2025, 2406, 2733
MflI	RGATCY	3 cut(s)	218, 562, 2359
MhlI	GDGCHC	4 cut(s)	1480, 2085, 2574, 3019
MlsI	TGGCCA	1 cut(s)	963
MluNI	TGGCCA	1 cut(s)	963
MlyI	GAGTC	3 cut(s)	1085, 1295, 2710
MmeI	TCCRAC	3 cut(s)	875, 944, 2858
Mox20I	TGGCCA	1 cut(s)	963
MroXI	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
MscI	TGGCCA	1 cut(s)	963
MslI	CAYNNNNRTG	4 cut(s)	502, 731, 1921, 2157
Msp20I	TGGCCA	1 cut(s)	963
MspA1I	CMGCKG	2 cut(s)	2234, 3041
MspCI	CTTAAG	1 cut(s)	2039
MspI	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
MspR9I	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
MunI	CAATTG	5 cut(s)	1748, 1811, 2025, 2406, 2733
Mva1269I	GAATGC	1 cut(s)	2734
MvaI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
MvnI	CGCG	2 cut(s)	2688, 2690
MwoI	GCNNNNNNNGC	3 cut(s)	2377, 2603, 2895
NciI	CCSGG	2 cut(s)	411, 412
NcoI	CCATGG	1 cut(s)	2338
NlaIV	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
NmeAIII	GCCGAG	1 cut(s)	1782
NmuCI	GTSAC	1 cut(s)	1394
NspI	RCATGY	4 cut(s)	1153, 1383, 1546, 2156
NspV	TTCGAA	1 cut(s)	1553
PaeI	GCATGC	1 cut(s)	1546
PaeR7I	CTCGAG	1 cut(s)	2992
PagI	TCATGA	1 cut(s)	1368
PceI	AGGCCT	1 cut(s)	2050
PciI	ACATGT	1 cut(s)	1149
PciSI	GCTCTTC	1 cut(s)	1672
PcsI	WCGNNNNNNNCGW	4 cut(s)	81, 84, 1698, 2692
PctI	GAATGC	1 cut(s)	2734
PdmI	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
PflMI	CCANNNNNTGG	3 cut(s)	1721, 1874, 2237
PfoI	TCCNGGA	1 cut(s)	2622
PinAI	ACCGGT	1 cut(s)	977
PkrI	GCNGC	9 cut(s)	46, 1378, 1696, 1828, 2236, 2433, 2888, 3037, 3040
Ple19I	CGATCG	1 cut(s)	1981
PleI	GAGTC	3 cut(s)	1085, 1295, 2710
PmaCI	CACGTG	1 cut(s)	3014
PmlI	CACGTG	1 cut(s)	3014
PpsI	GAGTC	3 cut(s)	1085, 1295, 2710
Ppu21I	YACGTR	2 cut(s)	420, 3014
PpuMI	RGGWCCY	2 cut(s)	1837, 2815
PscI	ACATGT	1 cut(s)	1149
Psp5II	RGGWCCY	2 cut(s)	1837, 2815
Psp6I	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
PspCI	CACGTG	1 cut(s)	3014
PspGI	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
PspN4I	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
PspPI	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
PspPPI	RGGWCCY	2 cut(s)	1837, 2815
PspXI	VCTCGAGB	1 cut(s)	2992
PstI	CTGCAG	2 cut(s)	579, 1606
PstNI	CAGNNNCTG	2 cut(s)	2237, 3041
PsuI	RGATCY	3 cut(s)	218, 562, 2359
PvuI	CGATCG	1 cut(s)	1981
PvuII	CAGCTG	2 cut(s)	2234, 3041
RsaI	GTAC	3 cut(s)	422, 2480, 2846
RsaNI	GTAC	3 cut(s)	421, 2479, 2845
RseI	CAYNNNNRTG	4 cut(s)	502, 731, 1921, 2157
SalI	GTCGAC	1 cut(s)	104
SapI	GCTCTTC	1 cut(s)	1672
SatI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
Sau96I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
SbfI	CCTGCAGG	1 cut(s)	579
SchI	GAGTC	3 cut(s)	1085, 1295, 2710
ScrFI	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
SdaI	CCTGCAGG	1 cut(s)	579
SduI	GDGCHC	4 cut(s)	1480, 2085, 2574, 3019
SfaNI	GCATC	8 cut(s)	172, 190, 524, 820, 1075, 1124, 2149, 3069
SfcI	CTRYAG	4 cut(s)	246, 575, 1602, 2943
Sfr274I	CTCGAG	1 cut(s)	2992
SfuI	TTCGAA	1 cut(s)	1553
SinI	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
SlaI	CTCGAG	1 cut(s)	2992
SmaI	CCCGGG	1 cut(s)	412
SmiI	ATTTAAAT	1 cut(s)	957
SmiMI	CAYNNNNRTG	4 cut(s)	502, 731, 1921, 2157
SmlI	CTYRAG	5 cut(s)	222, 1401, 2039, 2658, 2992
SmoI	CTYRAG	5 cut(s)	222, 1401, 2039, 2658, 2992
SnaBI	TACGTA	1 cut(s)	420
SpeI	ACTAGT	1 cut(s)	1685
SphI	GCATGC	1 cut(s)	1546
Sse8387I	CCTGCAGG	1 cut(s)	579
SseBI	AGGCCT	1 cut(s)	2050
SsiI	CCGC	5 cut(s)	11, 45, 216, 242, 2887
SspMI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
StuI	AGGCCT	1 cut(s)	2050
StyD4I	CCNGG	7 cut(s)	268, 409, 410, 595, 963, 1471, 2622
StyI	CCWWGG	3 cut(s)	631, 2338, 2970
SwaI	ATTTAAAT	1 cut(s)	957
TaaI	ACNGT	7 cut(s)	1266, 1643, 1732, 1958, 2498, 3049, 3129
TaiI	ACGT	4 cut(s)	422, 1617, 2698, 3016
TauI	GCSGC	2 cut(s)	47, 2889
TscAI	CASTG	7 cut(s)	406, 832, 1034, 1072, 1356, 1677, 1961
TseFI	GTSAC	1 cut(s)	1394
TseI	GCWGC	7 cut(s)	1376, 1694, 1826, 2234, 2431, 3035, 3038
Tsp45I	GTSAC	1 cut(s)	1394
TspGWI	ACGGA	2 cut(s)	707, 2925
TspMI	CCCGGG	1 cut(s)	410
TspRI	CASTG	7 cut(s)	406, 832, 1034, 1072, 1356, 1677, 1961
Van91I	CCANNNNNTGG	3 cut(s)	1721, 1874, 2237
Vha464I	CTTAAG	1 cut(s)	2039
VneI	GTGCAC	1 cut(s)	2081
VpaK11BI	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
XagI	CCTNNNNNAGG	1 cut(s)	2627
XceI	RCATGY	4 cut(s)	1153, 1383, 1546, 2156
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1034
XhoI	CTCGAG	1 cut(s)	2992
XmaI	CCCGGG	1 cut(s)	410
XmiI	GTMKAC	3 cut(s)	105, 1261, 2787
XmnI	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
XspI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.