AT1G61140

ATP binding DNA binding helicase nucleic acid binding protein binding zinc ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004421
Physical Location & Seq
Reverse (-)
22534663 .. 22540933
6271 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61140.3

Sequence Viewer

Length: 3843 bp
ATGGGTGAGGAAGGTTCAATGTTTGGTCTGGGAGGTGAATTTCCGGTTGATGATTGTGATGGTGGTTTTGAGTTTGAAGATGATGACGAGACTATTGACATCGAAACGCTTTATCGGATTCTAGATGAGAAGCCTGATTCTGCTGAGGGTAGCCAAGAAAACTTATCACCAGTTGGTTCATCTGCTGACGAGCTCAAGGATTCACAGTTGCTAAATGGTTCATTTGATGAACATGTGAAAATGGAAGCCGGGCTGAGTCCTTCACCTGCTCATACTTGCTCTGCAAGTCTTAAAGATTGGTTTTCGTTAAGTCAGGGTGAGCAGCCTGTGGAAACATGTGGAGTATCTCAATCTGAGATGACTAGTTGTAGTATATCGTCTAGTTTCTCTGATCCTGATGGCAATATGATGGCCTTCAATCCTGTGAATTGTGACGTTGACACTGTTTCCAAGCAGGATGATAAGATAATCGATTCCAAATCTATGTTGACTCCATATTTTGACAACGTGACTGGATACGGAGTGGGGTTGGGAGCCAATCATAATTCGTCTGCCATGTCTGTTTTTTTTAATAATTCCAATTCCCTCAGTGACAGTGCGGATAACTATGTCTCTTCTGCACAAGATTGCTACAATACAAGTGGTACATCCTTGTCAGACCATACCCCCAATTCTGTTCAGAATTTCGCGTTTGAGTTCTTTCCTAATAAAGAAGAAGCTGTAAATGATGTTGAGAGTGGAGTAAGTGAGTCTCAGTCGGATGGTGCCAGCCGGATGATTTTTGATAGACATGGAAGAGTGGATAATGGATCTTTAGAAAGGAAACCTCCTATTGATTTTTCTAGTGCAAGAGGGATCAGTTTCAAGTTTGAAAGTAATCCTTCAGTTTCTCCTGCCTGTGTCAAACCCTACAACAGTTTTGACAGTCATTTAGCTGATAGTGACCTTGACCGGCCTAATAATTATTCATGCAGTTTTCAGGATAATAAAACTGTTCATGTGAAGGTTAAACCAGAGGCTGAATCAGAGAAAGTTGTCTACAGTTCAGTTCCAGGGGAATTTAGTGTCAGGGATGATGCTTATCTTTCTGGAGAAACCAATCGTTGGTGGTCTGGTGCATCAAGCTCTGCAGTCTCCTATCAAACAGATATTGAAAAAGGATACTCATATATGGCACCGCAAACAGCTCTACCTAGCCAAGACAGTGGCAAGATAAGCTCCAATCATTTTTACGATTCAGATACATGTTTGCAATATGTTGTAGAAGATCCCAGCCCAGTGACACAAAACAATGAGTATAAAGACTTTCAAATTCAACAAGGAGACCGGGAATATATTCAACCGAGGGGCATTGATTCTCAATTCTCAAATGCCAGCTTTGAATCAGTTCAAAGCCATTCTTCAGAATGTATATCCGATAGTGATGATGATTCTGACGTCTGCATAATAGAACCTTATGGTCAATCTGCAATCCCACATCGACCTCTAGCTATGAAAATGCCGGTAGTTTCTTCAGAATATTCTACAGTTAGTCATAATTTTAATCAATCTGGAGGCCTGAAGCTTCAGTCAAATAAAGAAAATATGATCTTTCAAGCTGCATTGCAGGATCTCACTCAGCCTAATTCTGAAGCAATTCTGCCTGATGGTGTCTTGACAGTCCCGCTTCTGAGACATCAGCGAATCGCATTGTCATGGATGGCCCAGAAGGAGACAAGTGGCTTCCCCTGTTCGGGTGGAATTCTTGCTGATGATCAGGGTCTTGGGAAGACAGTTTCCACTATAGCTCTTATACTGAAGGAAAGGTCTAAACCTGCCCAAGCATGTGAAGAAAGTACGAAGAAAGAAATTTTTGACCTAGAAAGCGAGACTGGAGAATGTGCGCCTTTAAAACCCAGTGGAAGAAGCAAGCATTTTGAACACTCTCAATTGCTTTCCAATGAAAACAAAGTTGGTGGAGACAGTGTGGGTAAAGTGACGGGAAGGCCAGCTGCTGGAACGCTTGTTGTATGTCCCACTAGTGTTATGCGGCAGTGGGCTGATGAATTACATAAGAAGGTGACTAGTGAAGCAAATCTCTCTGTTCTGGTATACCATGGGTCTAGCAGAACAAAGGATCCTCATGAGTTGGCTAAATATGATGTTGTTGTTACCACATTTTCTATTGTAAGTATGGAAGTGCCAAAGCAGCCTCTTGTTGATGATGAGGATGAAGAGAAGGATGGTGTACATGATGGTGGAACTGCAGCTACTGGCTTTTGCTCAAACAAGAAAAGGAAATATCCTCCCGATTCTAAAAAGAAGGGTTCAAAGAAGAAGAAAGTTGAGTTTCTGTCTGGCCCTCTTGCGAAAGTTTCATGGTTTAGAGTTGTTCTAGATGAGGCACAGAGCATTAAAAATTACAAAACCCAAGTTGCAAGAGCATGCTGGGGCCTTCGTGCTAAACGGAGGTGGTGTTTGTCTGGCACTCCAATCCAGAATTCAATCGATGACCTTTACAGCTACTTTCGATTCCTCAAATATGATCCTTACTCTTCCTACGTATTGTTCTGTAGCACGATTAAGAACCCTATAACTAGGAACCCAGTGAAAGGATATCAGAAGCTGCAGGCTATCCTTAAAACAGTGATGCTTCGCCGAACTAAAGGTTCACTTCTTGATGGGAAACCCATAATCTCTTTACCTCCGAAGTCCATTGAGTTGAGAAAAGTGGATTTCACTGTGGAGGAACGTGATTTCTACTCCAAACTAGAGGCTGAATCTCGTACTCAATTCAGGGAATATGCAGAAGCTGGAACAGTGAAGCAAAATTATGTAAATATCTTGTTGATGCTCTTGCGCCTTCGCCAAGCTTGTGATCACCCTCTTCTCGTGAATGGTGAATACAGTTTTACCTGGGAATCTTCTGTTGGATTAGCTAAGAAGCAGATTCAGTCAGACGCTTCATTGGCAATTTGTGGTATCTGCAATGATGCACCTGAAGATGCTGTTGCTTCAGTTTGCGGTCATGTTTTCTGTAAACAGTGCATTTATGAACGCCTTACTGGTGATAGTAATCACTGTCCCTTTGCAAACTGCAATGTCAGACTCACCATCTCATCGTTATCTTCCAAAACGAGATTGGACGATGCTATGCCTGACATGCAGGAGCGTGCTACTTCGAATAGCCTTAGCCCTTGTTCTGATGAAGATCTTCCATATGGTTCATCTAAAATCAAGGCTGCTCTAGAGATCTTACAATCACTGCCCAAAGCACATGATTTGACAGATTCAAATCAGATCTCTGAAAACAGAGAATACTCCGGTCTTTCTATAACTCCTGTGAAGAATGAGGGTATGAGCGTTGATGTTCCGATTAAGGTAGCTGGAGAAAAAGCCATTGTTTTTTCCCAATGGACAAAGATGCTAAACCTACTTGAAGCTTCTCTTGTAAGTTCACATATTCAGTATAGAAGGCTCGATGGAACAATGTCAGTTGCTGCTAGGGATAAAGCAGTGCAGGATTTCAACACTCTCCCTGAGGTTACTGTAATGATAATGTCTCTCAAGGCTGCTAGTCTCGGACTGAACATGGTGGCAGCTTGTCATGTTCTGATGCTGGACTTATGGTGGAACCCAACAACCGAGGATCAAGCAATCGATAGAGCACATCGTATAGGACAGACACGACCAGTAACAGTAGTTCGCTTCACAGTAAAAGATACAGTCGAAGATCGGATATTAGCCCTTCAGCAAAAGAAGAGAATGATGGTAGCCTCTGCATTTGGAGAAGATGAAAAGGGAAGCCGACAGTCTCACCTCACAGTAGAGGACTTGAGCTATCTGTTTATGGCTGATTCATGA

Protein Analysis

1280

Amino Acids

141.13

Weight (kDa)

5.04

Isoelectric Point (pI)

48.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 401 - 797 3e-65 SNF2-related domain
zf-C3HC4_2 PF13923 828 - 864 1.7e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 828 - 864 2.4e-06 Zinc finger, C3HC4 type (RING finger)
Helicase_C PF00271 964 - 1062 4.1e-20 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
AatII GACGTC 1 cut(s) 1440
Acc36I ACCTGC 2 cut(s) 274, 1822
AccB1I GGYRCC 2 cut(s) 764, 1174
AccB7I CCANNNNNTGG 2 cut(s) 1104, 1994
AccI GTMKAC 2 cut(s) 1038, 2091
AccII CGCG 1 cut(s) 689
AciI CCGC 5 cut(s) 599, 1178, 1664, 2029, 3003
AclWI GGATC 9 cut(s) 386, 817, 863, 1262, 1617, 2111, 2124, 2519, 3636
AcsI RAATTY 7 cut(s) 38, 682, 1058, 1311, 1740, 1848, 2479
AcyI GRCGYC 1 cut(s) 1437
AfaI GTAC 4 cut(s) 646, 1837, 2229, 2767
AfiI CCNNNNNNNGG 5 cut(s) 1104, 1732, 1733, 1994, 2591
AflIII ACRYGT 3 cut(s) 232, 335, 1244
AhlI ACTAGT 3 cut(s) 362, 2018, 2063
AjnI CCWGG 2 cut(s) 1051, 2894
AjuI GAANNNNNNNTTGG 6 cut(s) 1935, 1967, 2464, 2496, 2892, 2924
AloI GAACNNNNNNTCC 2 cut(s) 2101, 2133
Alw21I GWGCWC 2 cut(s) 195, 3649
AlwI GGATC 9 cut(s) 386, 817, 863, 1262, 1617, 2111, 2124, 2519, 3636
AlwNI CAGNNNCTG 6 cut(s) 1019, 1994, 2252, 2605, 2792, 3479
AoxI GGCC 7 cut(s) 411, 953, 1555, 1701, 1985, 2338, 2431
ApoI RAATTY 7 cut(s) 38, 682, 1058, 1311, 1740, 1848, 2479
Asp700I GAANNNNTTC 4 cut(s) 1335, 1386, 1635, 3192
AspLEI GCGC 2 cut(s) 1885, 2841
AspS9I GGNCC 3 cut(s) 1702, 2339, 2431
AsuC2I CCSGG 2 cut(s) 250, 1328
AsuII TTCGAA 1 cut(s) 3161
AxyI CCTNAGG 1 cut(s) 3519
BamHI GGATCC 1 cut(s) 2116
BanI GGYRCC 2 cut(s) 764, 1174
BanII GRGCYC 1 cut(s) 195
BauI CACGAG 1 cut(s) 2870
BbsI GAAGAC 1 cut(s) 1775
Bbv12I GWGCWC 2 cut(s) 195, 3649
BbvCI CCTCAGC 1 cut(s) 144
BciT130I CCWGG 2 cut(s) 1053, 2896
BciVI GTATCC 2 cut(s) 509, 1154
BclI TGATCA 2 cut(s) 1753, 2857
BcnI CCSGG 2 cut(s) 250, 1328
BcuI ACTAGT 3 cut(s) 362, 2018, 2063
BfmI CTRYAG 7 cut(s) 1039, 1128, 1524, 1782, 2244, 2551, 2606
BfuAI ACCTGC 2 cut(s) 274, 1822
BfuI GTATCC 2 cut(s) 509, 1154
BglII AGATCT 3 cut(s) 3190, 3231, 3279
Bme1390I CCNGG 4 cut(s) 250, 1053, 1328, 2896
BmgT120I GGNCC 3 cut(s) 1702, 2339, 2431
BmiI GGNNCC 7 cut(s) 535, 766, 1176, 2118, 2432, 2582, 3614
BmrFI CCNGG 4 cut(s) 250, 1053, 1328, 2896
BmrI ACTGGG 3 cut(s) 1271, 1890, 2579
BmsI GCATC 9 cut(s) 1066, 1127, 2619, 2820, 2962, 2974, 3118, 3393, 3585
BmuI ACTGGG 3 cut(s) 1271, 1890, 2579
BpiI GAAGAC 1 cut(s) 1775
BpmI CTGGAG 4 cut(s) 1110, 1572, 1893, 3387
Bpu10I CCTNAGC 2 cut(s) 144, 3170
Bpu14I TTCGAA 1 cut(s) 3161
BpuEI CTTGAG 3 cut(s) 179, 3530, 3835
BpuMI CCSGG 2 cut(s) 250, 1328
Bsa29I ATCGAT 3 cut(s) 471, 2487, 3639
BsaAI YACGTR 1 cut(s) 2542
BsaBI GATNNNNATC 4 cut(s) 1080, 3054, 3189, 3273
BsaHI GRCGYC 1 cut(s) 1437
BsaI GGTCTC 1 cut(s) 1317
BsaJI CCNNGG 5 cut(s) 1052, 1343, 2095, 2895, 3624
BsaWI WCCGGW 2 cut(s) 43, 3302
BsaXI ACNNNNNCTCC 4 cut(s) 1950, 1980, 2440, 2470
Bsc4I CCNNNNNNNGG 5 cut(s) 1104, 1732, 1733, 1994, 2591
Bse118I RCCGGY 2 cut(s) 951, 1501
Bse1I ACTGG 9 cut(s) 170, 517, 1277, 1876, 1896, 2257, 2585, 3049, 3671
Bse21I CCTNAGG 1 cut(s) 3519
Bse3DI GCAATG 3 cut(s) 1601, 2974, 3085
Bse8I GATNNNNATC 4 cut(s) 1080, 3054, 3189, 3273
BseBI CCWGG 2 cut(s) 1053, 2896
BseCI ATCGAT 3 cut(s) 471, 2487, 3639
BseDI CCNNGG 5 cut(s) 1052, 1343, 2095, 2895, 3624
BseGI GGATG 8 cut(s) 463, 647, 766, 780, 1078, 1704, 2215, 2227
BseJI GATNNNNATC 4 cut(s) 1080, 3054, 3189, 3273
BseLI CCNNNNNNNGG 5 cut(s) 1104, 1732, 1733, 1994, 2591
BseMI GCAATG 3 cut(s) 1601, 2974, 3085
BseMII CTCAG 8 cut(s) 135, 245, 345, 601, 767, 1631, 1661, 3510
BseNI ACTGG 9 cut(s) 170, 517, 1277, 1876, 1896, 2257, 2585, 3049, 3671
BseYI CCCAGC 2 cut(s) 1271, 2427
BsgI GTGCAG 2 cut(s) 603, 3518
Bsh1236I CGCG 1 cut(s) 689
BshFI GGCC 7 cut(s) 413, 955, 1557, 1703, 1987, 2340, 2433
BshNI GGYRCC 2 cut(s) 764, 1174
BshVI ATCGAT 3 cut(s) 471, 2487, 3639
BsiHKAI GWGCWC 2 cut(s) 195, 3649
BsiSI CCGG 7 cut(s) 44, 249, 772, 952, 1327, 1502, 3303
BslFI GGGAC 3 cut(s) 1646, 1998, 3048
BslI CCNNNNNNNGG 5 cut(s) 1104, 1732, 1733, 1994, 2591
BsmFI GGGAC 3 cut(s) 1646, 1998, 3048
BsnI GGCC 7 cut(s) 413, 955, 1557, 1703, 1987, 2340, 2433
Bso31I GGTCTC 1 cut(s) 1317
Bsp119I TTCGAA 1 cut(s) 3161
Bsp1286I GDGCHC 2 cut(s) 195, 3649
Bsp1407I TGTACA 1 cut(s) 2227
Bsp19I CCATGG 1 cut(s) 2095
BspACI CCGC 5 cut(s) 599, 1178, 1664, 2029, 3003
BspANI GGCC 7 cut(s) 413, 955, 1557, 1703, 1987, 2340, 2433
BspCNI CTCAG 8 cut(s) 136, 246, 346, 600, 766, 1630, 1662, 3511
BspDI ATCGAT 3 cut(s) 471, 2487, 3639
BspFNI CGCG 1 cut(s) 689
BspHI TCATGA 2 cut(s) 2122, 3839
BspLI GGNNCC 7 cut(s) 535, 766, 1176, 2118, 2432, 2582, 3614
BspMAI CTGCAG 3 cut(s) 1132, 2248, 2610
BspMI ACCTGC 2 cut(s) 274, 1822
BspPI GGATC 9 cut(s) 386, 817, 863, 1262, 1617, 2111, 2124, 2519, 3636
BspT104I TTCGAA 1 cut(s) 3161
BspT107I GGYRCC 2 cut(s) 764, 1174
BspTNI GGTCTC 1 cut(s) 1317
BsrDI GCAATG 3 cut(s) 1601, 2974, 3085
BsrFI RCCGGY 2 cut(s) 951, 1501
BsrGI TGTACA 1 cut(s) 2227
BsrI ACTGG 9 cut(s) 170, 517, 1277, 1876, 1896, 2257, 2585, 3049, 3671
BssAI RCCGGY 2 cut(s) 951, 1501
BssECI CCNNGG 5 cut(s) 1052, 1343, 2095, 2895, 3624
BssNAI GTATAC 1 cut(s) 2092
BssNI GRCGYC 1 cut(s) 1437
BssSI CACGAG 1 cut(s) 2870
BssT1I CCWWGG 1 cut(s) 2095
Bst1107I GTATAC 1 cut(s) 2092
Bst2BI CACGAG 1 cut(s) 2870
Bst2UI CCWGG 2 cut(s) 1053, 2896
Bst6I CTCTTC 6 cut(s) 619, 790, 2208, 2539, 2871, 3734
BstACI GRCGYC 1 cut(s) 1437
BstAUI TGTACA 1 cut(s) 2227
BstBAI YACGTR 1 cut(s) 2542
BstBI TTCGAA 1 cut(s) 3161
BstC8I GCNNGC 7 cut(s) 769, 1375, 1910, 1989, 2425, 2610, 3153
BstDSI CCRYGG 1 cut(s) 2095
BstF5I GGATG 8 cut(s) 463, 647, 766, 780, 1078, 1704, 2215, 2227
BstFNI CGCG 1 cut(s) 689
BstHHI GCGC 2 cut(s) 1885, 2841
BstMWI GCNNNNNNNGC 4 cut(s) 1215, 2188, 2948, 3142
BstNI CCWGG 2 cut(s) 1053, 2896
BstNSI RCATGY 6 cut(s) 236, 339, 1248, 1827, 2427, 3145
BstSCI CCNGG 4 cut(s) 248, 1051, 1326, 2894
BstSFI CTRYAG 7 cut(s) 1039, 1128, 1524, 1782, 2244, 2551, 2606
BstSNI TACGTA 1 cut(s) 2542
BstUI CGCG 1 cut(s) 689
BstV2I GAAGAC 1 cut(s) 1775
BstX2I RGATCY 7 cut(s) 809, 1267, 1609, 2116, 3190, 3231, 3279
BstXI CCANNNNNNTGG 1 cut(s) 1205
BstYI RGATCY 7 cut(s) 809, 1267, 1609, 2116, 3190, 3231, 3279
BstZ17I GTATAC 1 cut(s) 2092
Bsu15I ATCGAT 3 cut(s) 471, 2487, 3639
Bsu36I CCTNAGG 1 cut(s) 3519
BsuI GTATCC 2 cut(s) 509, 1154
BsuRI GGCC 7 cut(s) 413, 955, 1557, 1703, 1987, 2340, 2433
BsuTUI ATCGAT 3 cut(s) 471, 2487, 3639
BtgI CCRYGG 1 cut(s) 2095
BtsCI GGATG 8 cut(s) 463, 647, 766, 780, 1078, 1704, 2215, 2227
BtsI GCAGTG 3 cut(s) 2039, 3242, 3501
BveI ACCTGC 2 cut(s) 274, 1822
Cac8I GCNNGC 7 cut(s) 769, 1375, 1910, 1989, 2425, 2610, 3153
CaiI CAGNNNCTG 6 cut(s) 1019, 1994, 2252, 2605, 2792, 3479
CciI TCATGA 2 cut(s) 2122, 3839
CfoI GCGC 2 cut(s) 1885, 2841
Cfr10I RCCGGY 2 cut(s) 951, 1501
Cfr13I GGNCC 3 cut(s) 1702, 2339, 2431
ClaI ATCGAT 3 cut(s) 471, 2487, 3639
CseI GACGC 1 cut(s) 2948
Csp6I GTAC 4 cut(s) 645, 1836, 2228, 2766
CspCI CAANNNNNGTGG 4 cut(s) 622, 657, 1936, 1971
CviQI GTAC 4 cut(s) 645, 1836, 2228, 2766
DraI TTTAAA 1 cut(s) 1890
Eam1104I CTCTTC 6 cut(s) 619, 790, 2208, 2539, 2871, 3734
EarI CTCTTC 6 cut(s) 619, 790, 2208, 2539, 2871, 3734
Ecl136II GAGCTC 1 cut(s) 193
Eco105I TACGTA 1 cut(s) 2542
Eco130I CCWWGG 1 cut(s) 2095
Eco147I AGGCCT 1 cut(s) 1557
Eco24I GRGCYC 1 cut(s) 195
Eco31I GGTCTC 1 cut(s) 1317
Eco32I GATATC 1 cut(s) 2597
Eco53kI GAGCTC 1 cut(s) 193
Eco81I CCTNAGG 1 cut(s) 3519
EcoICRI GAGCTC 1 cut(s) 193
EcoO109I RGGNCCY 1 cut(s) 2431
EcoRI GAATTC 2 cut(s) 1740, 2479
EcoRII CCWGG 2 cut(s) 1051, 2894
EcoRV GATATC 1 cut(s) 2597
EcoT14I CCWWGG 1 cut(s) 2095
EcoT38I GRGCYC 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 2095
FalI AAGNNNNNCTT 8 cut(s) 865, 897, 1384, 1416, 2637, 2669, 3411, 3443
FaqI GGGAC 3 cut(s) 1646, 1998, 3048
FauI CCCGC 1 cut(s) 1671
FauNDI CATATG 1 cut(s) 3199
FbaI TGATCA 2 cut(s) 1753, 2857
FblI GTMKAC 2 cut(s) 1038, 2091
FokI GGATG 8 cut(s) 470, 634, 773, 787, 1085, 1711, 2222, 2234
FriOI GRGCYC 1 cut(s) 195
GlaI GCGC 2 cut(s) 1884, 2840
GsaI CCCAGC 2 cut(s) 1275, 2431
GsuI CTGGAG 4 cut(s) 1110, 1572, 1893, 3387
HaeIII GGCC 7 cut(s) 413, 955, 1557, 1703, 1987, 2340, 2433
HapII CCGG 7 cut(s) 44, 249, 772, 952, 1327, 1502, 3303
HgaI GACGC 1 cut(s) 2948
HhaI GCGC 2 cut(s) 1885, 2841
Hin1I GRCGYC 1 cut(s) 1437
Hin6I GCGC 2 cut(s) 1883, 2839
HinP1I GCGC 2 cut(s) 1883, 2839
HincII GTYRAC 2 cut(s) 439, 489
HindII GTYRAC 2 cut(s) 439, 489
HindIII AAGCTT 3 cut(s) 1562, 2850, 3420
HpaII CCGG 7 cut(s) 44, 249, 772, 952, 1327, 1502, 3303
Hpy166II GTNNAC 8 cut(s) 439, 489, 1039, 2092, 2228, 2651, 3020, 3437
Hpy8I GTNNAC 8 cut(s) 439, 489, 1039, 2092, 2228, 2651, 3020, 3437
HpyCH4IV ACGT 5 cut(s) 435, 507, 1437, 2541, 2731
HpyF10VI GCNNNNNNNGC 4 cut(s) 1215, 2188, 2948, 3142
HpySE526I ACGT 5 cut(s) 435, 507, 1437, 2541, 2731
Hsp92I GRCGYC 1 cut(s) 1437
HspAI GCGC 2 cut(s) 1883, 2839
Ksp22I TGATCA 2 cut(s) 1753, 2857
LmnI GCTCC 3 cut(s) 533, 1223, 3148
LweI GCATC 9 cut(s) 1066, 1127, 2619, 2820, 2962, 2974, 3118, 3393, 3585
MaeII ACGT 5 cut(s) 435, 507, 1437, 2541, 2731
MfeI CAATTG 1 cut(s) 1928
MflI RGATCY 7 cut(s) 809, 1267, 1609, 2116, 3190, 3231, 3279
MhlI GDGCHC 2 cut(s) 195, 3649
MlyI GAGTC 4 cut(s) 265, 484, 758, 3081
MmeI TCCRAC 2 cut(s) 738, 2890
MroXI GAANNNNTTC 4 cut(s) 1335, 1386, 1635, 3192
MslI CAYNNNNRTG 2 cut(s) 1693, 2235
MspA1I CMGCKG 1 cut(s) 1991
MspI CCGG 7 cut(s) 44, 249, 772, 952, 1327, 1502, 3303
MspR9I CCNGG 4 cut(s) 250, 1053, 1328, 2896
MunI CAATTG 1 cut(s) 1928
MvaI CCWGG 2 cut(s) 1053, 2896
MvnI CGCG 1 cut(s) 689
MwoI GCNNNNNNNGC 4 cut(s) 1215, 2188, 2948, 3142
NciI CCSGG 2 cut(s) 250, 1328
NcoI CCATGG 1 cut(s) 2095
NdeI CATATG 1 cut(s) 3199
NlaIV GGNNCC 7 cut(s) 535, 766, 1176, 2118, 2432, 2582, 3614
NmuCI GTSAC 7 cut(s) 431, 508, 590, 941, 1279, 1975, 2059
NspI RCATGY 6 cut(s) 236, 339, 1248, 1827, 2427, 3145
NspV TTCGAA 1 cut(s) 3161
PaeI GCATGC 1 cut(s) 2427
PagI TCATGA 2 cut(s) 2122, 3839
PaqCI CACCTGC 1 cut(s) 274
PceI AGGCCT 1 cut(s) 1557
PciI ACATGT 3 cut(s) 232, 335, 1244
PdmI GAANNNNTTC 4 cut(s) 1335, 1386, 1635, 3192
PflMI CCANNNNNTGG 2 cut(s) 1104, 1994
PleI GAGTC 4 cut(s) 264, 484, 757, 3081
PpsI GAGTC 4 cut(s) 264, 484, 757, 3081
Ppu21I YACGTR 1 cut(s) 2542
PscI ACATGT 3 cut(s) 232, 335, 1244
Psp124BI GAGCTC 1 cut(s) 195
Psp6I CCWGG 2 cut(s) 1051, 2894
PspFI CCCAGC 2 cut(s) 1271, 2427
PspGI CCWGG 2 cut(s) 1051, 2894
PspN4I GGNNCC 7 cut(s) 535, 766, 1176, 2118, 2432, 2582, 3614
PspPI GGNCC 3 cut(s) 1702, 2339, 2431
PsrI GAACNNNNNNTAC 4 cut(s) 2233, 2265, 3666, 3698
PstI CTGCAG 3 cut(s) 1132, 2248, 2610
PstNI CAGNNNCTG 6 cut(s) 1019, 1994, 2252, 2605, 2792, 3479
PsuI RGATCY 7 cut(s) 809, 1267, 1609, 2116, 3190, 3231, 3279
PvuII CAGCTG 1 cut(s) 1991
RsaI GTAC 4 cut(s) 646, 1837, 2229, 2767
RsaNI GTAC 4 cut(s) 645, 1836, 2228, 2766
RseI CAYNNNNRTG 2 cut(s) 1693, 2235
SacI GAGCTC 1 cut(s) 195
Sau96I GGNCC 3 cut(s) 1702, 2339, 2431
SchI GAGTC 4 cut(s) 265, 484, 758, 3081
ScrFI CCNGG 4 cut(s) 250, 1053, 1328, 2896
SduI GDGCHC 2 cut(s) 195, 3649
SfaNI GCATC 9 cut(s) 1066, 1127, 2619, 2820, 2962, 2974, 3118, 3393, 3585
SfcI CTRYAG 7 cut(s) 1039, 1128, 1524, 1782, 2244, 2551, 2606
SfuI TTCGAA 1 cut(s) 3161
SmiMI CAYNNNNRTG 2 cut(s) 1693, 2235
SmlI CTYRAG 3 cut(s) 194, 3545, 3814
SmoI CTYRAG 3 cut(s) 194, 3545, 3814
SnaBI TACGTA 1 cut(s) 2542
SpeI ACTAGT 3 cut(s) 362, 2018, 2063
SphI GCATGC 1 cut(s) 2427
SseBI AGGCCT 1 cut(s) 1557
SsiI CCGC 5 cut(s) 599, 1178, 1664, 2029, 3003
SspI AATATT 1 cut(s) 1520
SstI GAGCTC 1 cut(s) 195
StuI AGGCCT 1 cut(s) 1557
StyD4I CCNGG 4 cut(s) 248, 1051, 1326, 2894
StyI CCWWGG 1 cut(s) 2095
TaiI ACGT 5 cut(s) 438, 510, 1440, 2544, 2734
TaqI TCGA 9 cut(s) 102, 471, 1480, 2487, 2509, 3161, 3459, 3639, 3708
TatI WGTACW 1 cut(s) 2227
TauI GCSGC 1 cut(s) 2032
TseFI GTSAC 7 cut(s) 431, 508, 590, 941, 1279, 1975, 2059
Tsp45I GTSAC 7 cut(s) 431, 508, 590, 941, 1279, 1975, 2059
TspGWI ACGGA 2 cut(s) 534, 2461
Van91I CCANNNNNTGG 2 cut(s) 1104, 1994
XapI RAATTY 7 cut(s) 38, 682, 1058, 1311, 1740, 1848, 2479
XbaI TCTAGA 3 cut(s) 121, 2374, 3226
XceI RCATGY 6 cut(s) 236, 339, 1248, 1827, 2427, 3145
XcmI CCANNNNNNNNNTGG 1 cut(s) 3118
XmiI GTMKAC 2 cut(s) 1038, 2091
XmnI GAANNNNTTC 4 cut(s) 1335, 1386, 1635, 3192
ZraI GACGTC 1 cut(s) 1438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.