Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015494

Physical Location & Seq

Genomic Coordinates Reverse (-)

3791168 .. 3794088

Gene Structure 2921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G11290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGAGCTCACAATTGGTGCAGTTCTCTACCGTTCCTCAAATCCCTAATCCCCCGTCTCGCCATCGTCACTTTCTCTCCGAGAGAAATTACATTCCGGCTAATGTCTATGAGCATCCAGCGGCTCTTCTTCTTGAGAGATGTTCTTCTCTGAAAGAACTTCGTCAAATTCTTCCTCTCGTCTTCAAAAATGGGCTTTATCAGGAGCATTTTTTCCAGACAAAGCTTGTCAGCTTGTTCTGTCGCTATGGCAGTGTCGACGAGGCTGCTCGTGTTTTCGAACCCATTGATAGTAAACTCAATGTTCTTTATCACACCATGCTTAAAGGGTTTGCTAAAGTTTCAGACTTGGATAAAGCTTTGCAATTTTTTGTTCGGATGAGGTATGATGATGTAGAGCCTGTTGTGTATAACTTCACTTATCTCCTCAAAGTTTGTGGAGACGAAGCAGAGCTTAGGGTTGGAAAGGAAATTCATGGGTTGTTGGTGAAGAGTGGGTTCTCGTTGGATTTGTTTGCCATGACTGGGCTTGAGAATATGTATGCCAAGTGTAGGCAGGTAAATGAGGCCCGCAAGGTGTTTGATAGAATGCCTGAGAGAGATTTGGTTTCTTGGAATACAATTGTGGCTGGGTATTCACAGAATGGGATGGCGAGAATGGCTTTGGAAATGGTTAAGTCAATGTGTGAGGAGAATCTGAAGCCTAGTTTTATCACTATTGTTTCTGTTTTGCCTGCTGTCTCTGCTTTGAGGTTGATTAGTGTTGGCAAGGAGATTCATGGGTATGCTATGCGGTCGGGATTTGATTCTCTTGTCAATATCTCCACTGCTTTGGTTGATATGTATGCGAAATGTGGATCTCTGGAAACTGCTCGGCAGCTCTTTGATGGGATGTTAGAAAGGAATGTTGTTTCATGGAATTCAATGATTGATGCCTATGTGCAGAATGAGAATCCTAAAGAGGCAATGTTAATTTTTCAAAAGATGTTGGACGAAGGAGTCAAACCCACTGATGTATCTGTCATGGGTGCTTTGCATGCTTGTGCTGACCTGGGTGACCTTGAGAGAGGAAGATTCATTCATAAGTTATCTGTTGAATTGGGTCTTGATAGAAATGTTTCTGTAGTGAACTCTTTGATCTCCATGTATTGCAAGTGCAAGGAAGTTGATACTGCTGCTTCTATGTTTGGGAAATTGCAGAGCAGAACCCTTGTCTCTTGGAATGCAATGATATTAGGATTTGCACAGAATGGACGTCCCATCGATGCTTTGAATTACTTCAGCCAGATGCGGTCTCGGACAGTGAAACCAGACACATTTACTTATGTGAGTGTGATAACTGCTATCGCAGAGCTGTCAATTACACATCATGCGAAGTGGATTCATGGGGTGGTTATGCGAAGTTGTCTGGATAAGAACGTGTTTGTCACAACGGCTCTAGTCGACATGTATGCGAAATGTGGTGCTATTATGATTGCAAGATTGATTTTTGACATGATGAGTGAGCGTCATGTGACAACATGGAATGCTATGATTGATGGATACGGGACACATGGATTTGGGAAAGCTGCTCTGGAGTTGTTTGAAGAAATGCAAAAAGGCACCATCAAACCAAATGGTGTCACATTTCTTTCTGTCATCTCTGCTTGCAGCCACTCGGGTTTGGTGGAGGCAGGACTCAAGTGCTTCTATATGATGAAGGAAAACTACAGCATAGAACTGTCAATGGACCACTATGGAGCCATGGTCGATCTTTTAGGTCGAGCTGGACGGTTGAATGAAGCATGGGACTTTATTATGCAGATGCCCGTTAAGCCGGCTGTAAATGTATATGGTGCCATGTTAGGTGCTTGCCAGATTCATAAAAATGTGAATTTCGCTGAGAAAGCAGCAGAGAGATTGTTTGAGTTGAACCCGGATGATGGTGGGTATCATGTGCTTCTTGCAAACATATATCGTGCAGCTTCAATGTGGGAAAAAGTGGGACAAGTGAGAGTTTCAATGTTGAGACAGGGTCTGCGCAAAACTCCTGGCTGCAGTATGGTGGAGATAAAGAACGAGGTGCATAGCTTCTTCTCTGGAAGCACAGCCCATCCCGATTCCAAGAAGATTTATGCGTTTCTTGAGAAGCTGATATGCCACATCAAAGAAGCTGGTTATGTTCCTGACACGAATTTAGTCCTCGGTGTGGAAAATGATGTTAAGGAGCAACTGCTGAGTACCCACAGTGAGAAGCTGGCTATATCTTTTGGATTGCTGAATACAACTGCAGGTACAACTATTCACGTAAGAAAGAACCTGCGGGTTTGTGCTGACTGTCACAATGCTACAAAGTACATTTCCCTTGTGACCGGACGGGAAATTGTAGTACGAGACATGCAACGGTTTCACCATTTCAAAAACGGTGCCTGTTCGTGCGGAGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

809

Amino Acids

90.87

Weight (kDa)

8.11

Isoelectric Point (pI)

29.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	102 - 148	7.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	200 - 241	1.3e-06	PPR repeat family
PPR_2	PF13041	300 - 348	5.4e-10	PPR repeat family
PPR	PF01535	303 - 333	1.3e-08	PPR repeat
PPR_2	PF13041	403 - 449	2.5e-10	PPR repeat family
PPR	PF01535	404 - 432	2.5e-06	PPR repeat
PPR_2	PF13041	504 - 550	9.2e-12	PPR repeat family
PPR	PF01535	506 - 532	2e-07	PPR repeat
E_motif	PF20431	620 - 682	1.4e-16	E motif
DYW_deaminase	PF14432	718 - 809	3.2e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0015494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11290
fragaria_vesca	FvH4_7g04350
malus_domestica	MD07G1040900.v1.1
prunus_persica	Prupe.2G049000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0329341
rosa_laevigata	RLG00000029901
rosa_multiflora	Rmu_co8161036.1_g000001 Rmu_sc0006184.1_g000011 Rmu_sc0039010.1_g000001
rosa_roxburghii	Rroxscaffold_4G00321210
rosa_rugosa	Rorug01G0078700
rosa_samantha	Rh1AG097000 Rh1BG077600 Rh1DG100500
rosa_wichuraiana	Rw1G007520 Rw1G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	995
AatII	GACGTC	1 cut(s)	1255
Acc16I	TGCGCA	1 cut(s)	2018
Acc36I	ACCTGC	3 cut(s)	544, 2258, 2304
AccB1I	GGYRCC	3 cut(s)	1598, 1832, 2402
AccI	GTMKAC	2 cut(s)	255, 1440
AciI	CCGC	6 cut(s)	119, 568, 790, 1288, 2299, 2415
AclWI	GGATC	1 cut(s)	862
AcsI	RAATTY	5 cut(s)	165, 468, 916, 1870, 2170
AcuI	CTGAAG	2 cut(s)	716, 1261
AcyI	GRCGYC	1 cut(s)	1252
AfaI	GTAC	4 cut(s)	2218, 2272, 2333, 2367
AfiI	CCNNNNNNNGG	4 cut(s)	522, 549, 1919, 2185
AflIII	ACRYGT	2 cut(s)	1416, 1443
AjnI	CCWGG	2 cut(s)	1047, 2026
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	7 cut(s)	60, 432, 742, 1216, 1296, 1999, 2364
AlwI	GGATC	1 cut(s)	862
AlwNI	CAGNNNCTG	1 cut(s)	2014
Ama87I	CYCGRG	1 cut(s)	1654
AoxI	GGCC	1 cut(s)	564
ApeKI	GCWGC	8 cut(s)	263, 874, 1172, 1565, 1647, 1886, 1958, 2031
ApoI	RAATTY	5 cut(s)	165, 468, 916, 1870, 2170
Asp700I	GAANNNNTTC	2 cut(s)	1114, 1274
AspLEI	GCGC	1 cut(s)	2019
AspS9I	GGNCC	2 cut(s)	565, 1726
AsuC2I	CCSGG	1 cut(s)	1913
AsuHPI	GGTGA	3 cut(s)	496, 1064, 2378
AsuII	TTCGAA	1 cut(s)	276
AvaI	CYCGRG	1 cut(s)	1654
AvaII	GGWCC	1 cut(s)	1726
BaeI	ACNNNNGTAYC	2 cut(s)	996, 1029
BanI	GGYRCC	3 cut(s)	1598, 1832, 2402
BanII	GRGCYC	1 cut(s)	8
BarI	GAAGNNNNNNTAC	2 cut(s)	1688, 1720
BauI	CACGAG	1 cut(s)	267
BbsI	GAAGAC	1 cut(s)	172
Bbv12I	GWGCWC	1 cut(s)	8
BbvI	GCAGC	8 cut(s)	250, 886, 1159, 1552, 1659, 1898, 1970, 2018
BccI	CCATC	8 cut(s)	69, 640, 878, 1265, 1529, 1610, 1913, 2097
BceAI	ACGGC	1 cut(s)	1446
BcgI	CGANNNNNNTGC	4 cut(s)	245, 279, 1430, 1464
BciT130I	CCWGG	2 cut(s)	1049, 2028
BciVI	GTATCC	1 cut(s)	1532
BcnI	CCSGG	1 cut(s)	1913
BcoDI	GTCTC	7 cut(s)	60, 432, 742, 1216, 1296, 1999, 2364
BfaI	CTAG	2 cut(s)	702, 1436
BfmI	CTRYAG	4 cut(s)	1119, 1705, 2032, 2265
BfuAI	ACCTGC	3 cut(s)	544, 2258, 2304
BfuI	GTATCC	1 cut(s)	1532
BisI	GCNGC	9 cut(s)	120, 264, 875, 1173, 1566, 1648, 1887, 1959, 2032
BlsI	GCNGC	9 cut(s)	121, 265, 876, 1174, 1567, 1649, 1888, 1960, 2033
Bme1390I	CCNGG	3 cut(s)	1049, 1913, 2028
Bme18I	GGWCC	1 cut(s)	1726
BmeT110I	CYCGRG	1 cut(s)	1654
BmgT120I	GGNCC	2 cut(s)	565, 1726
BmiI	GGNNCC	4 cut(s)	1600, 1738, 1834, 2404
BmrFI	CCNGG	3 cut(s)	1049, 1913, 2028
BmrI	ACTGGG	1 cut(s)	531
BmsI	GCATC	5 cut(s)	121, 919, 1252, 1275, 1791
BmuI	ACTGGG	1 cut(s)	531
BpiI	GAAGAC	1 cut(s)	172
BpmI	CTGGAG	1 cut(s)	1592
Bpu10I	CCTNAGC	1 cut(s)	452
Bpu14I	TTCGAA	1 cut(s)	276
BpuEI	CTTGAG	5 cut(s)	152, 548, 1079, 1661, 2141
BpuMI	CCSGG	1 cut(s)	1913
Bsa29I	ATCGAT	1 cut(s)	1260
BsaAI	YACGTR	1 cut(s)	2284
BsaHI	GRCGYC	1 cut(s)	1252
BsaI	GGTCTC	1 cut(s)	1296
BsaJI	CCNNGG	3 cut(s)	1048, 1740, 2179
BsaWI	WCCGGW	1 cut(s)	2348
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 1728, 1758
Bsc4I	CCNNNNNNNGG	4 cut(s)	522, 549, 1919, 2185
Bse118I	RCCGGY	1 cut(s)	1813
Bse1I	ACTGG	2 cut(s)	526, 2429
Bse3DI	GCAATG	2 cut(s)	969, 1230
BseBI	CCWGG	2 cut(s)	1049, 2028
BseCI	ATCGAT	1 cut(s)	1260
BseDI	CCNNGG	3 cut(s)	1048, 1740, 2179
BseGI	GGATG	6 cut(s)	112, 381, 651, 894, 1921, 2089
BseLI	CCNNNNNNNGG	4 cut(s)	522, 549, 1919, 2185
BseMI	GCAATG	2 cut(s)	969, 1230
BseMII	CTCAG	3 cut(s)	582, 1869, 2204
BseNI	ACTGG	2 cut(s)	526, 2429
BseRI	GAGGAG	2 cut(s)	413, 701
BseXI	GCAGC	8 cut(s)	250, 886, 1159, 1552, 1659, 1898, 1970, 2018
BseYI	CCCAGC	1 cut(s)	626
BsgI	GTGCAG	3 cut(s)	38, 959, 1977
Bsh1285I	CGRYCG	1 cut(s)	794
BshFI	GGCC	1 cut(s)	566
BshNI	GGYRCC	3 cut(s)	1598, 1832, 2402
BshVI	ATCGAT	1 cut(s)	1260
BsiEI	CGRYCG	1 cut(s)	794
BsiHKAI	GWGCWC	1 cut(s)	8
BsiHKCI	CYCGRG	1 cut(s)	1654
BsiSI	CCGG	4 cut(s)	95, 1814, 1913, 2349
BslFI	GGGAC	4 cut(s)	1239, 1558, 1799, 1995
BslI	CCNNNNNNNGG	4 cut(s)	522, 549, 1919, 2185
BsmAI	GTCTC	7 cut(s)	60, 432, 742, 1216, 1296, 1999, 2364
BsmBI	CGTCTC	2 cut(s)	60, 432
BsmFI	GGGAC	4 cut(s)	1239, 1558, 1799, 1995
BsmI	GAATGC	3 cut(s)	591, 1225, 1528
BsnI	GGCC	1 cut(s)	566
Bso31I	GGTCTC	1 cut(s)	1296
BsoBI	CYCGRG	1 cut(s)	1654
Bsp119I	TTCGAA	1 cut(s)	276
Bsp1286I	GDGCHC	1 cut(s)	8
Bsp143I	GATC	3 cut(s)	854, 1134, 1747
Bsp19I	CCATGG	1 cut(s)	1740
BspACI	CCGC	6 cut(s)	119, 568, 790, 1288, 2299, 2415
BspANI	GGCC	1 cut(s)	566
BspCNI	CTCAG	3 cut(s)	583, 1870, 2205
BspDI	ATCGAT	1 cut(s)	1260
BspLI	GGNNCC	4 cut(s)	1600, 1738, 1834, 2404
BspMAI	CTGCAG	2 cut(s)	2036, 2269
BspMI	ACCTGC	3 cut(s)	544, 2258, 2304
BspPI	GGATC	1 cut(s)	862
BspQI	GCTCTTC	1 cut(s)	129
BspT104I	TTCGAA	1 cut(s)	276
BspT107I	GGYRCC	3 cut(s)	1598, 1832, 2402
BspTNI	GGTCTC	1 cut(s)	1296
BsrDI	GCAATG	2 cut(s)	969, 1230
BsrFI	RCCGGY	1 cut(s)	1813
BsrI	ACTGG	2 cut(s)	526, 2429
BssAI	RCCGGY	1 cut(s)	1813
BssECI	CCNNGG	3 cut(s)	1048, 1740, 2179
BssMI	GATC	3 cut(s)	854, 1134, 1747
BssNI	GRCGYC	1 cut(s)	1252
BssSI	CACGAG	1 cut(s)	267
BssT1I	CCWWGG	1 cut(s)	1740
Bst2BI	CACGAG	1 cut(s)	267
Bst2UI	CCWGG	2 cut(s)	1049, 2028
Bst4CI	ACNGT	8 cut(s)	31, 1300, 1719, 1770, 2225, 2315, 2382, 2402
Bst6I	CTCTTC	2 cut(s)	129, 482
BstACI	GRCGYC	1 cut(s)	1252
BstBAI	YACGTR	1 cut(s)	2284
BstBI	TTCGAA	1 cut(s)	276
BstC8I	GCNNGC	7 cut(s)	568, 732, 1035, 1645, 1815, 1849, 2235
BstDEI	CTNAG	4 cut(s)	452, 591, 1878, 2213
BstDSI	CCRYGG	1 cut(s)	1740
BstEII	GGTNACC	1 cut(s)	1052
BstF5I	GGATG	6 cut(s)	112, 381, 651, 894, 1921, 2089
BstHHI	GCGC	1 cut(s)	2019
BstKTI	GATC	3 cut(s)	857, 1137, 1750
BstMAI	GTCTC	7 cut(s)	60, 432, 742, 1216, 1296, 1999, 2364
BstMBI	GATC	3 cut(s)	854, 1134, 1747
BstMCI	CGRYCG	1 cut(s)	794
BstMWI	GCNNNNNNNGC	5 cut(s)	656, 740, 1034, 1810, 1883
BstNI	CCWGG	2 cut(s)	1049, 2028
BstNSI	RCATGY	3 cut(s)	1037, 1447, 2377
BstPI	GGTNACC	1 cut(s)	1052
BstSCI	CCNGG	3 cut(s)	1047, 1911, 2026
BstSFI	CTRYAG	4 cut(s)	1119, 1705, 2032, 2265
BstV1I	GCAGC	8 cut(s)	250, 886, 1159, 1552, 1659, 1898, 1970, 2018
BstV2I	GAAGAC	1 cut(s)	172
BstX2I	RGATCY	1 cut(s)	854
BstXI	CCANNNNNNTGG	1 cut(s)	829
BstYI	RGATCY	1 cut(s)	854
Bsu15I	ATCGAT	1 cut(s)	1260
BsuI	GTATCC	1 cut(s)	1532
BsuRI	GGCC	1 cut(s)	566
BsuTUI	ATCGAT	1 cut(s)	1260
BtgI	CCRYGG	1 cut(s)	1740
BtsCI	GGATG	6 cut(s)	112, 381, 651, 894, 1921, 2089
BtsI	GCAGTG	2 cut(s)	256, 822
BtsIMutI	CAGTG	5 cut(s)	256, 822, 1005, 1305, 2230
BveI	ACCTGC	3 cut(s)	544, 2258, 2304
Cac8I	GCNNGC	7 cut(s)	568, 732, 1035, 1645, 1815, 1849, 2235
CaiI	CAGNNNCTG	1 cut(s)	2014
CfoI	GCGC	1 cut(s)	2019
Cfr10I	RCCGGY	1 cut(s)	1813
Cfr13I	GGNCC	2 cut(s)	565, 1726
ClaI	ATCGAT	1 cut(s)	1260
CseI	GACGC	1 cut(s)	1493
Csp6I	GTAC	4 cut(s)	2217, 2271, 2332, 2366
CspCI	CAANNNNNGTGG	2 cut(s)	415, 450
CviQI	GTAC	4 cut(s)	2217, 2271, 2332, 2366
DdeI	CTNAG	4 cut(s)	452, 591, 1878, 2213
DpnI	GATC	3 cut(s)	856, 1136, 1749
DpnII	GATC	3 cut(s)	854, 1134, 1747
DrdI	GACNNNNNNGTC	1 cut(s)	995
DseDI	GACNNNNNNGTC	1 cut(s)	995
Eam1104I	CTCTTC	2 cut(s)	129, 482
EarI	CTCTTC	2 cut(s)	129, 482
Ecl136II	GAGCTC	1 cut(s)	6
Eco130I	CCWWGG	1 cut(s)	1740
Eco24I	GRGCYC	1 cut(s)	8
Eco31I	GGTCTC	1 cut(s)	1296
Eco47I	GGWCC	1 cut(s)	1726
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	2 cut(s)	716, 1261
Eco88I	CYCGRG	1 cut(s)	1654
Eco91I	GGTNACC	1 cut(s)	1052
EcoICRI	GAGCTC	1 cut(s)	6
EcoO65I	GGTNACC	1 cut(s)	1052
EcoRI	GAATTC	1 cut(s)	916
EcoRII	CCWGG	2 cut(s)	1047, 2026
EcoT14I	CCWWGG	1 cut(s)	1740
EcoT38I	GRGCYC	1 cut(s)	8
ErhI	CCWWGG	1 cut(s)	1740
Esp3I	CGTCTC	2 cut(s)	60, 432
FalI	AAGNNNNNCTT	2 cut(s)	435, 467
FaqI	GGGAC	4 cut(s)	1239, 1558, 1799, 1995
FauI	CCCGC	2 cut(s)	575, 2292
FblI	GTMKAC	2 cut(s)	255, 1440
Fnu4HI	GCNGC	9 cut(s)	120, 264, 875, 1173, 1566, 1648, 1887, 1959, 2032
FokI	GGATG	6 cut(s)	99, 388, 658, 901, 1928, 2076
FriOI	GRGCYC	1 cut(s)	8
Fsp4HI	GCNGC	9 cut(s)	120, 264, 875, 1173, 1566, 1648, 1887, 1959, 2032
FspBI	CTAG	2 cut(s)	702, 1436
FspI	TGCGCA	1 cut(s)	2018
GlaI	GCGC	1 cut(s)	2018
GluI	GCNGC	9 cut(s)	120, 264, 875, 1173, 1566, 1648, 1887, 1959, 2032
GsaI	CCCAGC	1 cut(s)	630
GsuI	CTGGAG	1 cut(s)	1592
HaeIII	GGCC	1 cut(s)	566
HapII	CCGG	4 cut(s)	95, 1814, 1913, 2349
HgaI	GACGC	1 cut(s)	1493
HhaI	GCGC	1 cut(s)	2019
Hin1I	GRCGYC	1 cut(s)	1252
Hin6I	GCGC	1 cut(s)	2017
HinP1I	GCGC	1 cut(s)	2017
HincII	GTYRAC	2 cut(s)	256, 1441
HindII	GTYRAC	2 cut(s)	256, 1441
HindIII	AAGCTT	2 cut(s)	221, 354
HpaII	CCGG	4 cut(s)	95, 1814, 1913, 2349
HphI	GGTGA	3 cut(s)	496, 1064, 2378
Hpy166II	GTNNAC	4 cut(s)	256, 293, 1126, 1441
Hpy188I	TCNGA	6 cut(s)	79, 150, 343, 375, 696, 1296
Hpy8I	GTNNAC	4 cut(s)	256, 293, 1126, 1441
Hpy99I	CGWCG	1 cut(s)	260
HpyAV	CCTTC	2 cut(s)	986, 1690
HpyCH4III	ACNGT	8 cut(s)	31, 1300, 1719, 1770, 2225, 2315, 2382, 2402
HpyCH4IV	ACGT	3 cut(s)	1252, 1416, 2283
HpyF10VI	GCNNNNNNNGC	5 cut(s)	656, 740, 1034, 1810, 1883
HpyF3I	CTNAG	4 cut(s)	452, 591, 1878, 2213
HpySE526I	ACGT	3 cut(s)	1252, 1416, 2283
Hsp92I	GRCGYC	1 cut(s)	1252
HspAI	GCGC	1 cut(s)	2017
KroI	GCCGGC	1 cut(s)	1813
KroNI	GCCGGC	1 cut(s)	1815
Kzo9I	GATC	3 cut(s)	854, 1134, 1747
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	3 cut(s)	202, 1736, 2203
Lsp1109I	GCAGC	8 cut(s)	250, 886, 1159, 1552, 1659, 1898, 1970, 2018
LweI	GCATC	5 cut(s)	121, 919, 1252, 1275, 1791
MaeI	CTAG	2 cut(s)	702, 1436
MaeII	ACGT	3 cut(s)	1252, 1416, 2283
MaeIII	GTNAC	7 cut(s)	65, 1052, 1423, 1510, 1618, 2315, 2344
MalI	GATC	3 cut(s)	856, 1136, 1749
MboI	GATC	3 cut(s)	854, 1134, 1747
MfeI	CAATTG	2 cut(s)	11, 618
MflI	RGATCY	1 cut(s)	854
MhlI	GDGCHC	1 cut(s)	8
MlyI	GAGTC	2 cut(s)	1005, 1668
MmeI	TCCRAC	3 cut(s)	439, 483, 966
MroNI	GCCGGC	1 cut(s)	1813
MroXI	GAANNNNTTC	2 cut(s)	1114, 1274
MseI	TTAA	5 cut(s)	321, 672, 968, 1809, 2199
MslI	CAYNNNNRTG	3 cut(s)	780, 1038, 1863
MspA1I	CMGCKG	1 cut(s)	119
MspI	CCGG	4 cut(s)	95, 1814, 1913, 2349
MspR9I	CCNGG	3 cut(s)	1049, 1913, 2028
MunI	CAATTG	2 cut(s)	11, 618
Mva1269I	GAATGC	3 cut(s)	591, 1225, 1528
MvaI	CCWGG	2 cut(s)	1049, 2028
MwoI	GCNNNNNNNGC	5 cut(s)	656, 740, 1034, 1810, 1883
NaeI	GCCGGC	1 cut(s)	1815
NciI	CCSGG	1 cut(s)	1913
NcoI	CCATGG	1 cut(s)	1740
NdeII	GATC	3 cut(s)	854, 1134, 1747
NgoMIV	GCCGGC	1 cut(s)	1813
NlaIV	GGNNCC	4 cut(s)	1600, 1738, 1834, 2404
NmeAIII	GCCGAG	1 cut(s)	850
NmuCI	GTSAC	7 cut(s)	65, 1052, 1423, 1510, 1618, 2315, 2344
NsbI	TGCGCA	1 cut(s)	2018
NspI	RCATGY	3 cut(s)	1037, 1447, 2377
NspV	TTCGAA	1 cut(s)	276
PaeI	GCATGC	1 cut(s)	1037
PciI	ACATGT	1 cut(s)	1443
PciSI	GCTCTTC	1 cut(s)	129
PctI	GAATGC	3 cut(s)	591, 1225, 1528
PdiI	GCCGGC	1 cut(s)	1815
PdmI	GAANNNNTTC	2 cut(s)	1114, 1274
PfeI	GAWTC	8 cut(s)	691, 772, 803, 949, 1071, 1378, 1855, 2096
PflFI	GACNNNGTC	1 cut(s)	2010
PkrI	GCNGC	9 cut(s)	121, 265, 876, 1174, 1567, 1649, 1888, 1960, 2033
PleI	GAGTC	2 cut(s)	1004, 1668
PpsI	GAGTC	2 cut(s)	1004, 1668
Ppu21I	YACGTR	1 cut(s)	2284
PscI	ACATGT	1 cut(s)	1443
Psp124BI	GAGCTC	1 cut(s)	8
Psp6I	CCWGG	2 cut(s)	1047, 2026
PspEI	GGTNACC	1 cut(s)	1052
PspFI	CCCAGC	1 cut(s)	626
PspGI	CCWGG	2 cut(s)	1047, 2026
PspN4I	GGNNCC	4 cut(s)	1600, 1738, 1834, 2404
PspPI	GGNCC	2 cut(s)	565, 1726
PstI	CTGCAG	2 cut(s)	2036, 2269
PstNI	CAGNNNCTG	1 cut(s)	2014
PsuI	RGATCY	1 cut(s)	854
PsyI	GACNNNGTC	1 cut(s)	2010
RsaI	GTAC	4 cut(s)	2218, 2272, 2333, 2367
RsaNI	GTAC	4 cut(s)	2217, 2271, 2332, 2366
RseI	CAYNNNNRTG	3 cut(s)	780, 1038, 1863
SacI	GAGCTC	1 cut(s)	8
SalI	GTCGAC	2 cut(s)	254, 1439
SapI	GCTCTTC	1 cut(s)	129
SaqAI	TTAA	5 cut(s)	321, 672, 968, 1809, 2199
SatI	GCNGC	9 cut(s)	120, 264, 875, 1173, 1566, 1648, 1887, 1959, 2032
Sau3AI	GATC	3 cut(s)	854, 1134, 1747
Sau96I	GGNCC	2 cut(s)	565, 1726
SchI	GAGTC	2 cut(s)	1005, 1668
ScrFI	CCNGG	3 cut(s)	1049, 1913, 2028
SduI	GDGCHC	1 cut(s)	8
SfaNI	GCATC	5 cut(s)	121, 919, 1252, 1275, 1791
SfcI	CTRYAG	4 cut(s)	1119, 1705, 2032, 2265
SfuI	TTCGAA	1 cut(s)	276
SinI	GGWCC	1 cut(s)	1726
SmiMI	CAYNNNNRTG	3 cut(s)	780, 1038, 1863
SmlI	CTYRAG	5 cut(s)	131, 527, 1058, 1676, 2120
SmoI	CTYRAG	5 cut(s)	131, 527, 1058, 1676, 2120
SphI	GCATGC	1 cut(s)	1037
SsiI	CCGC	6 cut(s)	119, 568, 790, 1288, 2299, 2415
SspMI	CTAG	2 cut(s)	702, 1436
SstI	GAGCTC	1 cut(s)	8
StyD4I	CCNGG	3 cut(s)	1047, 1911, 2026
StyI	CCWWGG	1 cut(s)	1740
TaaI	ACNGT	8 cut(s)	31, 1300, 1719, 1770, 2225, 2315, 2382, 2402
TaiI	ACGT	3 cut(s)	1255, 1419, 2286
TaqI	TCGA	6 cut(s)	255, 276, 1260, 1440, 1746, 1759
TatI	WGTACW	1 cut(s)	2331
TauI	GCSGC	1 cut(s)	122
TfiI	GAWTC	8 cut(s)	691, 772, 803, 949, 1071, 1378, 1855, 2096
Tru1I	TTAA	5 cut(s)	321, 672, 968, 1809, 2199
Tru9I	TTAA	5 cut(s)	321, 672, 968, 1809, 2199
TscAI	CASTG	5 cut(s)	256, 829, 1012, 1305, 2230
TseFI	GTSAC	7 cut(s)	65, 1052, 1423, 1510, 1618, 2315, 2344
TseI	GCWGC	8 cut(s)	263, 874, 1172, 1565, 1647, 1886, 1958, 2031
Tsp45I	GTSAC	7 cut(s)	65, 1052, 1423, 1510, 1618, 2315, 2344
TspDTI	ATGAA	9 cut(s)	461, 764, 900, 1063, 1067, 1370, 1709, 1791, 1847
TspRI	CASTG	5 cut(s)	256, 829, 1012, 1305, 2230
Tth111I	GACNNNGTC	1 cut(s)	2010
VpaK11BI	GGWCC	1 cut(s)	1726
XapI	RAATTY	5 cut(s)	165, 468, 916, 1870, 2170
XceI	RCATGY	3 cut(s)	1037, 1447, 2377
XmiI	GTMKAC	2 cut(s)	255, 1440
XmnI	GAANNNNTTC	2 cut(s)	1114, 1274
XspI	CTAG	2 cut(s)	702, 1436
ZraI	GACGTC	1 cut(s)	1253

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.