Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0015494

Physical Location & Seq

Genomic Coordinates Forward (+)

15848585 .. 15851512

Gene Structure 2928 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G007520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGACCGGGGTTGTAAATTTGTATGCTAAATGTAGACAGATTGGTGATGCATATAAGATGTTCGATAGAATGCCTGAGAGGGACTTGGTTTCTTGGAACACTATTGTTGCTGCTTATGCGCAAAATGGGTTCGCCAGGAGAGCTTTGGAGTTGGTTATAAAGATGCAGGAGGAAGGCCAGAGGCCTGATTCCATCACATTGGTCACTGTATTACCTGCAGTTGCAGATTTTGGGTCCTTGGTGATCGGAAAGTCGATTCATGCCTATGTTATAAGAGCAAGTTTTGAGTCACTTGTGAACATTTCTACCGCTCTTCTAGACATGTATTCGAAATGTGGATCTGTGGCCACTGCTCGGTCGATTTTCAACAGGATGAATCACAAGACTGTTGTTTCCTGGAATTCTATGATAGATGGGTATGTACAAAATGAAGATCCTGAGGAAGCAATGGCGATTTTCCAGAAGATGCTGGATGAAGGCTTTGAACCAACCAATGTTACTATTATGGAAGCTTTACATGCTTGTGCTGATTTGGGAGATCTTGAGCGGGGAAAGTTTGTGCATAAATTATTGGATCAACTGAACCTCGGATATGATGTCTCAGTTGTGAATTCTTTGATATCCATGTATTCCAAGTGTAAGAGAGTTGATATTGCTACAAAATTGTTTAGAGGCTTAAAGGGTAAGACCATCGTCTCATGGAATGCCATGATATTAGGTTTTGCACAGAATGGTCGCGTCAGCGAGGCTTTAAGTCACTTCTGTGAGATGCAATCTCAAAATATAAAGCCAGATTCGTTTACAATGGTGAGTGTAATTCCAGCTCTTGCAGAGTTATCAGTTACACGTCAGGCTAAATGGATCCATGGACTTGTTGTAAGAAAATGTTTTGACAAAAACGTTTTTGTGATGACTGCTCTTGTTGATATGTATGCAAAATGTGGAGCTGTCCACACTGCAAGAAAACTTTTTGACCTGAAGGATGACCGGCATGTGACAACATGGAACAGTATGATCGACGGATATGGAACAAATGGGCTTGGAAAGGCTGCTGTGGAACTGTTCAATGAAATGAAAAAGGGCATAATAAAGCCAAATGATATAACATTTCTATGTGTGATATCCGCTTGTTCTCATTCAGGATTGGTGGAAGACGGTCTTCAATACTTTGAAAGCATGAAGGATGACTATGGCTTGGAGCCTGCAATGGATCACTACGGTGCCATGGTTGATCTTCTTGGTCGAGCTGGCCGACTAAATGAGGCTTGGGATTTTATTCAAAAGATGCCTATGGAACCTGGCATTACAGTCTTTGGTGCAATGTTAGGGGCTTGCAGAATTCATAAAAATGTTGAATTGGGGGAAAAGGCAGCAGATAAAATATTCGAGTTGAACCCTGTTGAAGGTGGGTACCATGTTTTGCTTGCTAACATATATTCCACAGCTTCAATGTGGGACAAAGTGGCCAAAGTGCGAACAACAATGGAGAAGAAAGGGCTCAAGAAAACTCCAGGCTGCAGTTTGGTGGATTTAAAGAACCAAGTTCACACTTTCTATTCTGGAAGTACAAGCCATCCCCAATCCAAGAGAATATATACATATCTGGAGACGCTGGTTATGTGCCGGACACAAATTCAATTCATGATGTGGAAGATGATGTCAAGGAGCAATTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

558

Amino Acids

62.43

Weight (kDa)

8.28

Isoelectric Point (pI)

30.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	28 - 72	5.7e-07	PPR repeat family
PPR	PF01535	30 - 59	9.5e-06	PPR repeat
PPR_2	PF13041	129 - 168	5.5e-11	PPR repeat family
PPR	PF01535	131 - 161	7.1e-10	PPR repeat
PPR_2	PF13041	230 - 277	6.7e-12	PPR repeat family
PPR	PF01535	232 - 262	1.4e-07	PPR repeat
PPR_2	PF13041	332 - 378	1.7e-13	PPR repeat family
PPR	PF01535	334 - 360	3.3e-08	PPR repeat
E_motif	PF20431	448 - 509	5e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11290
fragaria_vesca	FvH4_7g04350
malus_domestica	MD07G1040900.v1.1
prunus_persica	Prupe.2G049000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0329341
rosa_laevigata	RLG00000029901
rosa_multiflora	Rmu_co8161036.1_g000001 Rmu_sc0006184.1_g000011 Rmu_sc0039010.1_g000001
rosa_roxburghii	Rroxscaffold_4G00321210
rosa_rugosa	Rorug01G0078700
rosa_samantha	Rh1AG097000 Rh1BG077600 Rh1DG100500
rosa_wichuraiana	Rw1G007520 Rw1G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	158, 272
Acc16I	TGCGCA	1 cut(s)	120
Acc36I	ACCTGC	1 cut(s)	223
Acc65I	GGTACC	1 cut(s)	1410
AccB1I	GGYRCC	2 cut(s)	1220, 1410
AccBSI	CCGCTC	2 cut(s)	311, 547
AccI	GTMKAC	1 cut(s)	34
AccII	CGCG	1 cut(s)	738
AciI	CCGC	3 cut(s)	309, 547, 1125
AclI	AACGTT	1 cut(s)	900
AclWI	GGATC	6 cut(s)	346, 428, 582, 856, 869, 1218
AcoI	YGGCCR	3 cut(s)	345, 1249, 1464
AcsI	RAATTY	5 cut(s)	16, 400, 610, 1338, 1632
AcuI	CTGAAG	1 cut(s)	998
AfaI	GTAC	3 cut(s)	423, 1412, 1567
AfiI	CCNNNNNNNGG	2 cut(s)	354, 1403
AflIII	ACRYGT	2 cut(s)	321, 845
AjiI	CACGTC	1 cut(s)	848
AjnI	CCWGG	4 cut(s)	134, 395, 1297, 1510
AleI	CACNNNNGTG	2 cut(s)	762, 1218
AluBI	AGCT	6 cut(s)	143, 512, 824, 947, 1247, 1445
AluI	AGCT	6 cut(s)	143, 512, 824, 947, 1247, 1445
Alw26I	GTCTC	3 cut(s)	604, 700, 1601
AlwI	GGATC	6 cut(s)	346, 428, 582, 856, 869, 1218
AoxI	GGCC	5 cut(s)	175, 182, 345, 1249, 1464
ApeKI	GCWGC	4 cut(s)	110, 1049, 1370, 1515
ApoI	RAATTY	5 cut(s)	16, 400, 610, 1338, 1632
Asp718I	GGTACC	1 cut(s)	1410
AspLEI	GCGC	1 cut(s)	121
AspS9I	GGNCC	1 cut(s)	234
AsuC2I	CCSGG	1 cut(s)	7
AsuHPI	GGTGA	3 cut(s)	56, 253, 820
AsuII	TTCGAA	1 cut(s)	329
AvaII	GGWCC	1 cut(s)	234
AxyI	CCTNAGG	1 cut(s)	438
BalI	TGGCCA	2 cut(s)	347, 1466
BamHI	GGATCC	1 cut(s)	861
BanI	GGYRCC	2 cut(s)	1220, 1410
BanII	GRGCYC	1 cut(s)	1500
BbsI	GAAGAC	2 cut(s)	1151, 1158
BbvI	GCAGC	4 cut(s)	97, 1036, 1382, 1502
BccI	CCATC	4 cut(s)	200, 407, 698, 1581
BciT130I	CCWGG	4 cut(s)	136, 397, 1299, 1512
BcnI	CCSGG	1 cut(s)	7
BcoDI	GTCTC	3 cut(s)	604, 700, 1601
BfaI	CTAG	1 cut(s)	317
BfmI	CTRYAG	2 cut(s)	216, 1516
BfuAI	ACCTGC	1 cut(s)	223
BglII	AGATCT	1 cut(s)	538
BisI	GCNGC	4 cut(s)	111, 1050, 1371, 1516
BlsI	GCNGC	4 cut(s)	112, 1051, 1372, 1517
Bme1390I	CCNGG	5 cut(s)	7, 136, 397, 1299, 1512
Bme18I	GGWCC	1 cut(s)	234
BmgBI	CACGTC	1 cut(s)	848
BmgT120I	GGNCC	1 cut(s)	234
BmiI	GGNNCC	6 cut(s)	235, 863, 1200, 1222, 1296, 1412
BmrFI	CCNGG	5 cut(s)	7, 136, 397, 1299, 1512
BmsI	GCATC	5 cut(s)	37, 153, 456, 759, 1275
BoxI	GACNNNNGTC	1 cut(s)	692
BpiI	GAAGAC	2 cut(s)	1151, 1158
BpmI	CTGGAG	2 cut(s)	1494, 1625
Bpu14I	TTCGAA	1 cut(s)	329
BpuEI	CTTGAG	2 cut(s)	563, 1484
BpuMI	CCSGG	1 cut(s)	7
BsaJI	CCNNGG	5 cut(s)	6, 237, 586, 865, 1224
Bsc4I	CCNNNNNNNGG	2 cut(s)	354, 1403
Bse118I	RCCGGY	1 cut(s)	987
Bse21I	CCTNAGG	1 cut(s)	438
Bse3DI	GCAATG	3 cut(s)	453, 1212, 1326
BseBI	CCWGG	4 cut(s)	136, 397, 1299, 1512
BseDI	CCNNGG	5 cut(s)	6, 237, 586, 865, 1224
BseGI	GGATG	5 cut(s)	378, 478, 988, 1189, 1573
BseLI	CCNNNNNNNGG	2 cut(s)	354, 1403
BseMI	GCAATG	3 cut(s)	453, 1212, 1326
BseMII	CTCAG	3 cut(s)	66, 429, 615
BseXI	GCAGC	4 cut(s)	97, 1036, 1382, 1502
Bsh1236I	CGCG	1 cut(s)	738
Bsh1285I	CGRYCG	1 cut(s)	359
BshFI	GGCC	5 cut(s)	177, 184, 347, 1251, 1466
BshNI	GGYRCC	2 cut(s)	1220, 1410
BsiEI	CGRYCG	1 cut(s)	359
BsiSI	CCGG	3 cut(s)	6, 988, 1624
BslFI	GGGAC	2 cut(s)	95, 1469
BslI	CCNNNNNNNGG	2 cut(s)	354, 1403
BsmAI	GTCTC	3 cut(s)	604, 700, 1601
BsmBI	CGTCTC	2 cut(s)	700, 1601
BsmFI	GGGAC	2 cut(s)	95, 1469
BsmI	GAATGC	2 cut(s)	75, 709
BsnI	GGCC	5 cut(s)	177, 184, 347, 1251, 1466
Bsp119I	TTCGAA	1 cut(s)	329
Bsp1286I	GDGCHC	1 cut(s)	1500
Bsp1407I	TGTACA	1 cut(s)	421
Bsp143I	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
Bsp19I	CCATGG	2 cut(s)	865, 1224
BspACI	CCGC	3 cut(s)	309, 547, 1125
BspANI	GGCC	5 cut(s)	177, 184, 347, 1251, 1466
BspCNI	CTCAG	3 cut(s)	67, 430, 614
BspFNI	CGCG	1 cut(s)	738
BspHI	TCATGA	1 cut(s)	1641
BspLI	GGNNCC	6 cut(s)	235, 863, 1200, 1222, 1296, 1412
BspMAI	CTGCAG	2 cut(s)	220, 1520
BspMI	ACCTGC	1 cut(s)	223
BspPI	GGATC	6 cut(s)	346, 428, 582, 856, 869, 1218
BspQI	GCTCTTC	1 cut(s)	318
BspT104I	TTCGAA	1 cut(s)	329
BspT107I	GGYRCC	2 cut(s)	1220, 1410
BsrBI	CCGCTC	2 cut(s)	311, 547
BsrDI	GCAATG	3 cut(s)	453, 1212, 1326
BsrFI	RCCGGY	1 cut(s)	987
BsrGI	TGTACA	1 cut(s)	421
BssAI	RCCGGY	1 cut(s)	987
BssECI	CCNNGG	5 cut(s)	6, 237, 586, 865, 1224
BssMI	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
BssT1I	CCWWGG	3 cut(s)	237, 865, 1224
Bst2UI	CCWGG	4 cut(s)	136, 397, 1299, 1512
Bst4CI	ACNGT	7 cut(s)	208, 388, 1010, 1062, 1157, 1220, 1309
Bst6I	CTCTTC	1 cut(s)	318
BstAUI	TGTACA	1 cut(s)	421
BstBI	TTCGAA	1 cut(s)	329
BstC8I	GCNNGC	4 cut(s)	1203, 1249, 1333, 1425
BstDEI	CTNAG	3 cut(s)	75, 438, 601
BstDSI	CCRYGG	2 cut(s)	865, 1224
BstENI	CCTNNNNNAGG	1 cut(s)	1401
BstF5I	GGATG	5 cut(s)	378, 478, 988, 1189, 1573
BstFNI	CGCG	1 cut(s)	738
BstHHI	GCGC	1 cut(s)	121
BstKTI	GATC	9 cut(s)	246, 341, 436, 541, 577, 864, 1017, 1213, 1234
BstMAI	GTCTC	3 cut(s)	604, 700, 1601
BstMBI	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
BstMCI	CGRYCG	1 cut(s)	359
BstMWI	GCNNNNNNNGC	3 cut(s)	116, 140, 518
BstNI	CCWGG	4 cut(s)	136, 397, 1299, 1512
BstNSI	RCATGY	3 cut(s)	325, 521, 995
BstPAI	GACNNNNGTC	1 cut(s)	692
BstSCI	CCNGG	5 cut(s)	5, 134, 395, 1297, 1510
BstSFI	CTRYAG	2 cut(s)	216, 1516
BstUI	CGCG	1 cut(s)	738
BstV1I	GCAGC	4 cut(s)	97, 1036, 1382, 1502
BstV2I	GAAGAC	2 cut(s)	1151, 1158
BstX2I	RGATCY	4 cut(s)	338, 433, 538, 861
BstXI	CCANNNNNNTGG	1 cut(s)	199
BstYI	RGATCY	4 cut(s)	338, 433, 538, 861
Bsu36I	CCTNAGG	1 cut(s)	438
BsuRI	GGCC	5 cut(s)	177, 184, 347, 1251, 1466
BtgI	CCRYGG	2 cut(s)	865, 1224
BtrI	CACGTC	1 cut(s)	848
BtsCI	GGATG	5 cut(s)	378, 478, 988, 1189, 1573
BtsI	GCAGTG	2 cut(s)	348, 954
BtsIMutI	CAGTG	3 cut(s)	204, 348, 954
BveI	ACCTGC	1 cut(s)	223
Cac8I	GCNNGC	4 cut(s)	1203, 1249, 1333, 1425
CciI	TCATGA	1 cut(s)	1641
CfoI	GCGC	1 cut(s)	121
Cfr10I	RCCGGY	1 cut(s)	987
Cfr13I	GGNCC	1 cut(s)	234
CseI	GACGC	2 cut(s)	727, 1618
Csp6I	GTAC	3 cut(s)	422, 1411, 1566
CviQI	GTAC	3 cut(s)	422, 1411, 1566
DdeI	CTNAG	3 cut(s)	75, 438, 601
DpnI	GATC	9 cut(s)	245, 340, 435, 540, 576, 863, 1016, 1212, 1233
DpnII	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
DraI	TTTAAA	1 cut(s)	1533
EaeI	YGGCCR	3 cut(s)	345, 1249, 1464
Eam1104I	CTCTTC	1 cut(s)	318
EarI	CTCTTC	1 cut(s)	318
Eco130I	CCWWGG	3 cut(s)	237, 865, 1224
Eco147I	AGGCCT	1 cut(s)	184
Eco24I	GRGCYC	1 cut(s)	1500
Eco32I	GATATC	2 cut(s)	621, 1122
Eco47I	GGWCC	1 cut(s)	234
Eco57I	CTGAAG	1 cut(s)	998
Eco81I	CCTNAGG	1 cut(s)	438
EcoNI	CCTNNNNNAGG	1 cut(s)	1401
EcoO109I	RGGNCCY	1 cut(s)	234
EcoRI	GAATTC	3 cut(s)	400, 610, 1338
EcoRII	CCWGG	4 cut(s)	134, 395, 1297, 1510
EcoRV	GATATC	2 cut(s)	621, 1122
EcoT14I	CCWWGG	3 cut(s)	237, 865, 1224
EcoT22I	ATGCAT	1 cut(s)	52
EcoT38I	GRGCYC	1 cut(s)	1500
ErhI	CCWWGG	3 cut(s)	237, 865, 1224
Esp3I	CGTCTC	2 cut(s)	700, 1601
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	2 cut(s)	95, 1469
FauI	CCCGC	1 cut(s)	540
FblI	GTMKAC	1 cut(s)	34
Fnu4HI	GCNGC	4 cut(s)	111, 1050, 1371, 1516
FokI	GGATG	5 cut(s)	385, 485, 995, 1196, 1560
FriOI	GRGCYC	1 cut(s)	1500
Fsp4HI	GCNGC	4 cut(s)	111, 1050, 1371, 1516
FspBI	CTAG	1 cut(s)	317
FspI	TGCGCA	1 cut(s)	120
GlaI	GCGC	1 cut(s)	120
GluI	GCNGC	4 cut(s)	111, 1050, 1371, 1516
GsuI	CTGGAG	2 cut(s)	1494, 1625
HaeIII	GGCC	5 cut(s)	177, 184, 347, 1251, 1466
HapII	CCGG	3 cut(s)	6, 988, 1624
HgaI	GACGC	2 cut(s)	727, 1618
HhaI	GCGC	1 cut(s)	121
Hin6I	GCGC	1 cut(s)	119
HinP1I	GCGC	1 cut(s)	119
HindIII	AAGCTT	1 cut(s)	510
HinfI	GANTC	5 cut(s)	188, 256, 287, 376, 794
HpaII	CCGG	3 cut(s)	6, 988, 1624
HphI	GGTGA	3 cut(s)	56, 253, 820
Hpy166II	GTNNAC	5 cut(s)	35, 298, 801, 952, 1546
Hpy188I	TCNGA	2 cut(s)	248, 590
Hpy188III	TCNNGA	9 cut(s)	317, 437, 460, 542, 1140, 1501, 1560, 1604, 1642
Hpy8I	GTNNAC	5 cut(s)	35, 298, 801, 952, 1546
Hpy99I	CGWCG	1 cut(s)	1022
HpyAV	CCTTC	5 cut(s)	167, 470, 973, 1174, 1397
HpyCH4III	ACNGT	7 cut(s)	208, 388, 1010, 1062, 1157, 1220, 1309
HpyCH4IV	ACGT	2 cut(s)	847, 900
HpyF10VI	GCNNNNNNNGC	3 cut(s)	116, 140, 518
HpyF3I	CTNAG	3 cut(s)	75, 438, 601
HpySE526I	ACGT	2 cut(s)	847, 900
HspAI	GCGC	1 cut(s)	119
KpnI	GGTACC	1 cut(s)	1414
Kzo9I	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
LguI	GCTCTTC	1 cut(s)	318
LmnI	GCTCC	3 cut(s)	944, 1198, 1665
Lsp1109I	GCAGC	4 cut(s)	97, 1036, 1382, 1502
LweI	GCATC	5 cut(s)	37, 153, 456, 759, 1275
MaeI	CTAG	1 cut(s)	317
MaeII	ACGT	2 cut(s)	847, 900
MaeIII	GTNAC	6 cut(s)	202, 288, 496, 755, 841, 994
MalI	GATC	9 cut(s)	245, 340, 435, 540, 576, 863, 1016, 1212, 1233
MbiI	CCGCTC	2 cut(s)	311, 547
MboI	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
MboII	GAAGA	8 cut(s)	305, 443, 475, 1151, 1163, 1226, 1501, 1663
MfeI	CAATTG	1 cut(s)	1669
MflI	RGATCY	4 cut(s)	338, 433, 538, 861
MhlI	GDGCHC	1 cut(s)	1500
MlsI	TGGCCA	2 cut(s)	347, 1466
MluNI	TGGCCA	2 cut(s)	347, 1466
MlyI	GAGTC	1 cut(s)	296
MnlI	CCTC	8 cut(s)	72, 163, 174, 433, 596, 665, 739, 1255
Mox20I	TGGCCA	2 cut(s)	347, 1466
Mph1103I	ATGCAT	1 cut(s)	52
MscI	TGGCCA	2 cut(s)	347, 1466
MseI	TTAA	3 cut(s)	677, 752, 1532
MslI	CAYNNNNRTG	6 cut(s)	264, 522, 762, 1111, 1218, 1347
Msp20I	TGGCCA	2 cut(s)	347, 1466
MspI	CCGG	3 cut(s)	6, 988, 1624
MspR9I	CCNGG	5 cut(s)	7, 136, 397, 1299, 1512
MunI	CAATTG	1 cut(s)	1669
Mva1269I	GAATGC	2 cut(s)	75, 709
MvaI	CCWGG	4 cut(s)	136, 397, 1299, 1512
MvnI	CGCG	1 cut(s)	738
MwoI	GCNNNNNNNGC	3 cut(s)	116, 140, 518
NciI	CCSGG	1 cut(s)	7
NcoI	CCATGG	2 cut(s)	865, 1224
NdeII	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
NlaIV	GGNNCC	6 cut(s)	235, 863, 1200, 1222, 1296, 1412
NmuCI	GTSAC	4 cut(s)	202, 288, 755, 994
NsbI	TGCGCA	1 cut(s)	120
NsiI	ATGCAT	1 cut(s)	52
NspI	RCATGY	3 cut(s)	325, 521, 995
NspV	TTCGAA	1 cut(s)	329
OliI	CACNNNNGTG	2 cut(s)	762, 1218
PagI	TCATGA	1 cut(s)	1641
PceI	AGGCCT	1 cut(s)	184
PciI	ACATGT	1 cut(s)	321
PciSI	GCTCTTC	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	1 cut(s)	1249
PctI	GAATGC	2 cut(s)	75, 709
PfeI	GAWTC	4 cut(s)	188, 256, 376, 794
PfoI	TCCNGGA	1 cut(s)	395
PkrI	GCNGC	4 cut(s)	112, 1051, 1372, 1517
PleI	GAGTC	1 cut(s)	295
PpsI	GAGTC	1 cut(s)	295
PpuMI	RGGWCCY	1 cut(s)	234
PscI	ACATGT	1 cut(s)	321
PshAI	GACNNNNGTC	1 cut(s)	692
PsiI	TTATAA	2 cut(s)	158, 272
Psp1406I	AACGTT	1 cut(s)	900
Psp5II	RGGWCCY	1 cut(s)	234
Psp6I	CCWGG	4 cut(s)	134, 395, 1297, 1510
PspGI	CCWGG	4 cut(s)	134, 395, 1297, 1510
PspN4I	GGNNCC	6 cut(s)	235, 863, 1200, 1222, 1296, 1412
PspPI	GGNCC	1 cut(s)	234
PspPPI	RGGWCCY	1 cut(s)	234
PstI	CTGCAG	2 cut(s)	220, 1520
PsuI	RGATCY	4 cut(s)	338, 433, 538, 861
RsaI	GTAC	3 cut(s)	423, 1412, 1567
RsaNI	GTAC	3 cut(s)	422, 1411, 1566
RseI	CAYNNNNRTG	6 cut(s)	264, 522, 762, 1111, 1218, 1347
SapI	GCTCTTC	1 cut(s)	318
SaqAI	TTAA	3 cut(s)	677, 752, 1532
SatI	GCNGC	4 cut(s)	111, 1050, 1371, 1516
Sau3AI	GATC	9 cut(s)	243, 338, 433, 538, 574, 861, 1014, 1210, 1231
Sau96I	GGNCC	1 cut(s)	234
SchI	GAGTC	1 cut(s)	296
ScrFI	CCNGG	5 cut(s)	7, 136, 397, 1299, 1512
SduI	GDGCHC	1 cut(s)	1500
SfaNI	GCATC	5 cut(s)	37, 153, 456, 759, 1275
SfcI	CTRYAG	2 cut(s)	216, 1516
SfuI	TTCGAA	1 cut(s)	329
SinI	GGWCC	1 cut(s)	234
SmiMI	CAYNNNNRTG	6 cut(s)	264, 522, 762, 1111, 1218, 1347
SmlI	CTYRAG	2 cut(s)	542, 1499
SmoI	CTYRAG	2 cut(s)	542, 1499
SseBI	AGGCCT	1 cut(s)	184
SsiI	CCGC	3 cut(s)	309, 547, 1125
SspI	AATATT	1 cut(s)	1383
SspMI	CTAG	1 cut(s)	317
StuI	AGGCCT	1 cut(s)	184
StyD4I	CCNGG	5 cut(s)	5, 134, 395, 1297, 1510
StyI	CCWWGG	3 cut(s)	237, 865, 1224
TaaI	ACNGT	7 cut(s)	208, 388, 1010, 1062, 1157, 1220, 1309
TaiI	ACGT	2 cut(s)	850, 903
TaqI	TCGA	7 cut(s)	63, 254, 329, 359, 1017, 1243, 1386
TaqII	GACCGA	1 cut(s)	345
TatI	WGTACW	2 cut(s)	421, 1565
TfiI	GAWTC	4 cut(s)	188, 256, 376, 794
Tru1I	TTAA	3 cut(s)	677, 752, 1532
Tru9I	TTAA	3 cut(s)	677, 752, 1532
TscAI	CASTG	3 cut(s)	211, 355, 961
TseFI	GTSAC	4 cut(s)	202, 288, 755, 994
TseI	GCWGC	4 cut(s)	110, 1049, 1370, 1515
Tsp45I	GTSAC	4 cut(s)	202, 288, 755, 994
TspDTI	ATGAA	9 cut(s)	248, 389, 444, 489, 1083, 1088, 1193, 1331, 1630
TspGWI	ACGGA	1 cut(s)	1035
TspRI	CASTG	3 cut(s)	211, 355, 961
VpaK11BI	GGWCC	1 cut(s)	234
XagI	CCTNNNNNAGG	1 cut(s)	1401
XapI	RAATTY	5 cut(s)	16, 400, 610, 1338, 1632
XbaI	TCTAGA	1 cut(s)	316
XceI	RCATGY	3 cut(s)	325, 521, 995
XcmI	CCANNNNNNNNNTGG	1 cut(s)	142
XmiI	GTMKAC	1 cut(s)	34
XspI	CTAG	1 cut(s)	317
Zsp2I	ATGCAT	1 cut(s)	52

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.